Sgr016865 (gene) Monk fruit (Qingpiguo) v1

Overview
NameSgr016865
Typegene
OrganismSiraitia grosvenorii (Monk fruit (Qingpiguo) v1)
DescriptionCCHC-type domain-containing protein
Locationtig00153014: 503652 .. 505253 (-)
RNA-Seq ExpressionSgr016865
SyntenySgr016865
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATGATGGGGTAATATGCTGGGGGAAAACCTTGAGGGTTCGAATTACTATTGACGTGAACAAGCCGTTAAGGAGGGCCATCATGATCAAAGTTATTGGCTCTATGGCTGAAGATACTTGGATCCCCATTACTTACGAGAAATTATTGGACTTTTGTTATGCATGTGACTGGCTGGGGCATGTGCTGAAGGATTGGCAATCACACTCGGAGACGGCAGAAGAAGATCTTCAATATGGCGTGTGGCTAAGAGGAACGGCTAATCAAAGGGGAAATTATGGAGGAAGAAAAGGAGGAAGAGAGAGCAACAAAAATAGAGGTCTAGGGCGAGGAAGGACACGAGATCAAAGTTGGCAAAATTGGGGCTAGCAATCAGATGAAAGTGACTATTCTTTGAATAGACCTTAGGATTTGAATCCAGAAAATGGGAAGAAAATGCCCGAAAGTTCACTTGCCGATAAGGAGACGATGGAAGGCAAACACAAAAATGAAAAAGGAGGAAAATGAGGAAAAATTTTATGAGAGAGAGAATTATGGAGATACAGGGAAGGGGGACACGAAAAATAAGGAAAGTGTGATTGAAGGAAAAGCTGGAAAAGGATTGATGATGGAAGAGTCGGTTAAAGGGAAATAGCTGGTATAGATAGAAATGAGCCCAAATAAAAGAAAGATGGGCTGAAGAAAATATTCGTTTGGGCCAAATAAAAAGCAAGAAAGAAAGCTAGGCTGAAGGAAATGGAGAAGGATGTAAGGGAAAATGGGCCGAAGGAAAAAATACACAAGAAAGTCCATGAAAAGTTTTTCTTTCAGAAAGAAAGGCAAAGTTGAGTGAAATTAATAAAATGGCAGAGAGCCCAATGATGGAAGAGCATAATCGGATCCAGATAGAGGATAGAATAAATAAAGCTAAAACTTAGAAAAGGACACGTGATAGAACAACCTTAGAAAGGAAGGATGGGAGTTATCAATGTTTTTGAGAAAAAACACTTAATCCCTCTTTTTTTGGAGAAACAATAGTCCAAGAAAATGTGCGTGGATGGGTTAGGAAACTGCAAAGAAATATCGATGGAGGCTGCTCAGCAGCCTTGCTTGTCACAATGAAAGTATTAAGTTGGAATGTTCGAGGATTGGAGAATCCTTAAGTATTCTGCGCACTACGGGATATGGTCCATAGCAACAACCCATAGTTAGTTTTCTTGTCAGAAATGAAGGGAAGTGTAACTTTGAGTGATAAAGTTAAAATAATTATCTTTTGAAGGATGTCTTACTATTTCTAACAAAAGAAATAGTGGAGGCTTAATGTTTTTATGGTCAAAAGACACTAATGTCAATATTCTTTCTTTTTCCACAGGACACATCGACACGATTATAAAAGACGACAATGGGAGTTGGCAATTCACAGGTATTCATGGGCATTCTAGTGGAGATAGAAGGGTGGAAACTTGGAAACTTATTGAACGACTCATCCATGTATCTAATCTCTCATGGATCCTCTGGGGACATTTCAATGAGATCATAGACGATTCCAAAAAGGTTAGTGGATCAAACAGAAGGCCAAGCCAAATGAAGGCTTTTAGAGATGTGATTGATGACTGTAGATGA

mRNA sequence

ATGGATGATGGGGTAATATGCTGGGGGAAAACCTTGAGGGTTCGAATTACTATTGACGTGAACAAGCCGTTAAGGAGGGCCATCATGATCAAAGTTATTGGCTCTATGGCTGAAGATACTTGGATCCCCATTACTTACGAGAAATTATTGGACTTTTGTTATGCATGTGACTGGCTGGGGCATGTGCTGAAGGATTGGCAATCACACTCGGAGACGGCAGAAGAAGATCTTCAATATGGCGTGTGGCTAAGAGGAACGGCTAATCAAAGGGGAAATTATGGAGGAAGAAAAGGAGGAAGAGAGAGCAACAAAAATAGAGGACACATCGACACGATTATAAAAGACGACAATGGGAGTTGGCAATTCACAGGTATTCATGGGCATTCTAGTGGAGATAGAAGGGTGGAAACTTGGAAACTTATTGAACGACTCATCCATGTATCTAATCTCTCATGGATCCTCTGGGGACATTTCAATGAGATCATAGACGATTCCAAAAAGGTTAGTGGATCAAACAGAAGGCCAAGCCAAATGAAGGCTTTTAGAGATGTGATTGATGACTGTAGATGA

Coding sequence (CDS)

ATGGATGATGGGGTAATATGCTGGGGGAAAACCTTGAGGGTTCGAATTACTATTGACGTGAACAAGCCGTTAAGGAGGGCCATCATGATCAAAGTTATTGGCTCTATGGCTGAAGATACTTGGATCCCCATTACTTACGAGAAATTATTGGACTTTTGTTATGCATGTGACTGGCTGGGGCATGTGCTGAAGGATTGGCAATCACACTCGGAGACGGCAGAAGAAGATCTTCAATATGGCGTGTGGCTAAGAGGAACGGCTAATCAAAGGGGAAATTATGGAGGAAGAAAAGGAGGAAGAGAGAGCAACAAAAATAGAGGACACATCGACACGATTATAAAAGACGACAATGGGAGTTGGCAATTCACAGGTATTCATGGGCATTCTAGTGGAGATAGAAGGGTGGAAACTTGGAAACTTATTGAACGACTCATCCATGTATCTAATCTCTCATGGATCCTCTGGGGACATTTCAATGAGATCATAGACGATTCCAAAAAGGTTAGTGGATCAAACAGAAGGCCAAGCCAAATGAAGGCTTTTAGAGATGTGATTGATGACTGTAGATGA

Protein sequence

MDDGVICWGKTLRVRITIDVNKPLRRAIMIKVIGSMAEDTWIPITYEKLLDFCYACDWLGHVLKDWQSHSETAEEDLQYGVWLRGTANQRGNYGGRKGGRESNKNRGHIDTIIKDDNGSWQFTGIHGHSSGDRRVETWKLIERLIHVSNLSWILWGHFNEIIDDSKKVSGSNRRPSQMKAFRDVIDDCR
Homology
BLAST of Sgr016865 vs. NCBI nr
Match: XP_010686122.1 (PREDICTED: uncharacterized protein LOC104900404 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 102.1 bits (253), Expect = 5.5e-18
Identity = 66/203 (32.51%), Postives = 101/203 (49.75%), Query Frame = 0

Query: 3   DGVICWGKTLRVRITIDVNKPLRRAIMIKVIGSMAEDTWIPITYEKLLDFCYACDWLGHV 62
           DGV  W ++ RVRI +D+ KPLRR   I +         + + YE+L  FCYAC  +GH+
Sbjct: 159 DGV-QWDRSARVRILLDIKKPLRRVQRISL--KDGSTVLVDVKYERLPTFCYACGLIGHI 218

Query: 63  LKD-WQSHSETAEEDLQYGVWLR-----GTANQRGNYGGR-----KGGRES------NKN 122
            +D   +  E   E  Q+G WLR     G +++R    GR      G +E+      + +
Sbjct: 219 ERDCLVNQEEDGNEGKQWGSWLRASPRKGRSSKRRRLVGRVDFVFTGKKEAIDFTLVSFS 278

Query: 123 RGHIDTIIKDDNGSWQFTGIHGHSSGDRRVETWKLIERLIHVSNLSWILWGHFNEIIDDS 182
           + HI   +      W+F G++G      +  TW+LI  L    +   +L G FNEI+   
Sbjct: 279 KNHICGDVVRRGERWRFVGVYGWPEESNKHRTWELIRHLCLEFDGPLVLGGDFNEILSYD 338

Query: 183 KKVSGSNRRPSQMKAFRDVIDDC 189
           +K  G++R    M+ FR+VID C
Sbjct: 339 EKQGGADRERRAMRGFREVIDTC 358

BLAST of Sgr016865 vs. NCBI nr
Match: PPD83812.1 (hypothetical protein GOBAR_DD19246 [Gossypium barbadense])

HSP 1 Score: 90.9 bits (224), Expect = 1.3e-14
Identity = 64/213 (30.05%), Postives = 106/213 (49.77%), Query Frame = 0

Query: 8   WGKTLRVRITIDVNKPLRRAIMIKVIGSMAEDTWIPITYEKLLDFCYACDWLGHVLKDWQ 67
           W + +R+++ I V+KPLRR  ++K +     +    + YE+L DFC+ C  +GH LK   
Sbjct: 50  WTEFMRLKVKIAVSKPLRR--IVKFMDRDGIERIGLLKYERLPDFCHLCGIIGHSLKGCT 109

Query: 68  SH---SETAEEDLQYGVWLRGTA-NQRGNYG------------------GRKGG-----R 127
            +         +LQ+G W+R  A NQ  + G                  G+ GG     R
Sbjct: 110 KNMLEGGIRLTNLQFGNWMRAPAFNQNQDKGMRINGVEVMGGCLTVSSEGKSGGLAMMWR 169

Query: 128 E------SNKNRGHIDTIIKDDNGS-WQFTGIHGHSSGDRRVETWKLIERLIHVSNLSWI 187
           E         ++ HID++IK DNG   +FTG +GH + + R   W +++++    N  WI
Sbjct: 170 EDVDVTIQTYSKFHIDSLIKLDNGEVIRFTGFYGHPNPNLRHHAWDMLKKVKDKVNEGWI 229

BLAST of Sgr016865 vs. NCBI nr
Match: PPD84469.1 (hypothetical protein GOBAR_DD18598 [Gossypium barbadense])

HSP 1 Score: 89.4 bits (220), Expect = 3.7e-14
Identity = 57/211 (27.01%), Postives = 102/211 (48.34%), Query Frame = 0

Query: 8   WGKTLRVRITIDVNKPLRRAIMIKVIGSMAEDTWIPITYEKLLDFCYACDWLGHVLKDWQ 67
           W + LR++I I+++ P+RR  ++K +G    +    + YE+L  FCY C  +GH +K  +
Sbjct: 163 WTEFLRLKIKINISNPVRR--VVKFVGRDEIEIICALKYERLPTFCYYCGLIGHTVKKCK 222

Query: 68  SHSETA---EEDLQYGVWLR---GTANQRGNYG------------------GRK------ 127
           S    +     +LQYG WLR     +NQ    G                  G K      
Sbjct: 223 SKDRDSGFNVLNLQYGSWLRVNFVASNQERGIGRNGIEIMVKKTPPNEDKEGSKTDTRED 282

Query: 128 -GGRESNKNRGHIDTIIKDDNGSWQFTGIHGHSSGDRRVETWKLIERLIHVSNLSWILWG 187
            G  E  +N    +    D++ S++FTG +G++  ++R  +W ++ ++       WI+ G
Sbjct: 283 SGQMEQKRNEKGCEEESLDNDNSFRFTGFYGNADPNKRRSSWDMLRKVGDTVREKWIIGG 342

BLAST of Sgr016865 vs. NCBI nr
Match: PPS08715.1 (hypothetical protein GOBAR_AA11939 [Gossypium barbadense])

HSP 1 Score: 88.6 bits (218), Expect = 6.3e-14
Identity = 63/262 (24.05%), Postives = 111/262 (42.37%), Query Frame = 0

Query: 8   WGKTLRVRITIDVNKPLRRAIMIKVIGSMAEDTWIPITYEKLLDFCYACDWLGHVLKDWQ 67
           W + +R+++ ID++KPLRR  ++K+      +T   I YE+LLDFCY C  +GH  K+ +
Sbjct: 174 WTEFMRLKVKIDISKPLRR--IVKLASRYGGETIGVIKYERLLDFCYVCGLIGHTSKNCK 233

Query: 68  SHSETA---EEDLQYGVWLR---------------------------------------- 127
            + E A   + + QYG W+R                                        
Sbjct: 234 DNREGAGINDSNAQYGSWMRAPFVNPNQERNMRRNGVEIVKTTITANEDKEESQTNSRDE 293

Query: 128 -GTANQRGNYGGRKGGR------------------ESNKNRG------------------ 187
            G + Q+GN  G K  R                  +  ++RG                  
Sbjct: 294 SGQSAQKGNEKGVKKARYRHHLWKKEVISLYVTAWDEGRSRGLVMMWKDSKQVEIQTYSS 353

BLAST of Sgr016865 vs. NCBI nr
Match: XP_030923374.1 (uncharacterized protein LOC115950293 [Quercus lobata])

HSP 1 Score: 87.8 bits (216), Expect = 1.1e-13
Identity = 41/82 (50.00%), Postives = 56/82 (68.29%), Query Frame = 0

Query: 108 HIDTII-KDDNGSWQFTGIHGHSSGDRRVETWKLIERLIHVSNLSWILWGHFNEIIDDSK 167
           HIDTII K    +W+FTGI+G     R+VETW+L++ L    NL WI  G FNEI+   +
Sbjct: 10  HIDTIINKGKAEAWRFTGIYGFPEVGRKVETWELLKGLSQKFNLPWICAGDFNEILRSHE 69

Query: 168 KVSGSNRRPSQMKAFRDVIDDC 189
           K+ G+ RR S+M +FRDV+D+C
Sbjct: 70  KIGGAARRESKMNSFRDVVDEC 91

BLAST of Sgr016865 vs. ExPASy TrEMBL
Match: A0A2N9E949 (CCHC-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS3389 PE=4 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 1.0e-17
Identity = 68/242 (28.10%), Postives = 112/242 (46.28%), Query Frame = 0

Query: 2   DDGVICWGKTLRVRITIDVNKPLRRAIMIKVIGSMAEDTWIPITYEKLLDFCYACDWLGH 61
           +DG I WG+ +RV++ IDV+ PL R   +K+     E  W+ + YEKL  FCY C  LGH
Sbjct: 102 EDG-ITWGEFMRVQVRIDVSMPLLRRQRVKL--GKEESIWVTLKYEKLPTFCYNCGILGH 161

Query: 62  VLKDWQ---SHSETAE-EDLQYGVWLRGTANQR--------GNYGGRKGGRESNKNRG-- 121
             ++ +    H ++ +    +YG WLR T  +R        G +  R G    N+  G  
Sbjct: 162 SERECRLVTQHEKSKDGNHYEYGSWLRATPGRRKTGSVTFEGAFPKRNGIVYHNQLNGGG 221

Query: 122 --------------------------HIDTIIKDDNGS-----------------WQFTG 181
                                     H+  ++K++N S                 W+ TG
Sbjct: 222 CKAASPTAMSILSWNCQGLGNPWTVRHLHELVKENNPSILFLMETRMKAVEMEKTWRITG 281

Query: 182 IHGHSSGDRRVETWKLIERLIHVSNLSWILWGHFNEIIDDSKKVSGSNRRPSQMKAFRDV 187
            +G      R+++WKL++ L   + L W++ G FNEI+ +S+K+  + R  SQM +FR+ 
Sbjct: 282 FYGCPERSGRLDSWKLLKHLGDQNRLPWVVIGDFNEILGNSEKMGKALRAESQMASFREA 340

BLAST of Sgr016865 vs. ExPASy TrEMBL
Match: A0A2P5XZD0 (CCHC-type domain-containing protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA11939 PE=4 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 3.1e-14
Identity = 63/262 (24.05%), Postives = 111/262 (42.37%), Query Frame = 0

Query: 8   WGKTLRVRITIDVNKPLRRAIMIKVIGSMAEDTWIPITYEKLLDFCYACDWLGHVLKDWQ 67
           W + +R+++ ID++KPLRR  ++K+      +T   I YE+LLDFCY C  +GH  K+ +
Sbjct: 174 WTEFMRLKVKIDISKPLRR--IVKLASRYGGETIGVIKYERLLDFCYVCGLIGHTSKNCK 233

Query: 68  SHSETA---EEDLQYGVWLR---------------------------------------- 127
            + E A   + + QYG W+R                                        
Sbjct: 234 DNREGAGINDSNAQYGSWMRAPFVNPNQERNMRRNGVEIVKTTITANEDKEESQTNSRDE 293

Query: 128 -GTANQRGNYGGRKGGR------------------ESNKNRG------------------ 187
            G + Q+GN  G K  R                  +  ++RG                  
Sbjct: 294 SGQSAQKGNEKGVKKARYRHHLWKKEVISLYVTAWDEGRSRGLVMMWKDSKQVEIQTYSS 353

BLAST of Sgr016865 vs. ExPASy TrEMBL
Match: A0A803LLP6 (Uncharacterized protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 2.0e-13
Identity = 48/188 (25.53%), Postives = 88/188 (46.81%), Query Frame = 0

Query: 10  KTLRVRITIDVNKPLRRAIMIKVIGSMAEDTWIPITYEKLLDFCYACDWLGHVLKDWQSH 69
           K++R+R+ +DV +PL + + +K+ G + E  +  + YEK   FCY C  +GH +KD   H
Sbjct: 65  KSIRLRVMVDVRRPLIKHVKLKLRGGIEE--FFEVKYEKTPLFCYFCGLMGHGIKDCDEH 124

Query: 70  SETAEEDLQYGVWLRGTA-NQRGNYGGRKGGRESNKNRGHI-------DTIIKDDNGSWQ 129
            E     + +G W++ +    R    G  GG     + G +            +++  W+
Sbjct: 125 KECDNPTIPFGEWMKASPWKYRPGIRGENGGEAGKSSAGALFVTKPKTSEQRANEHEEWR 184

Query: 130 FTGIHGHSSGDRRVETWKLIERLIHVSNLSWILWGHFNEIIDDSKKVSGSNRRPSQMKAF 189
           F  I+GH   + + +T +L+E L   +  SW++ G  N ++   +K  G           
Sbjct: 185 FMVIYGHPEEENKYKTGQLLESLRDTNEKSWLVEGDLNLMLHSHEKRGGRGFCFEVADIL 244

BLAST of Sgr016865 vs. ExPASy TrEMBL
Match: A0A5C7GW09 (CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_024788 PE=4 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 2.6e-13
Identity = 48/126 (38.10%), Postives = 69/126 (54.76%), Query Frame = 0

Query: 12  LRVRITIDVNKPLRRAIMIKVIGSMAEDTWIPITYEKLLDFCYACDWLGHVLKDWQSHS- 71
           LRVR+ ++++KPLRR + I V+G   E   + I YE+LLDFC+ C  LGH  KD      
Sbjct: 145 LRVRVLLEIDKPLRRCLRIDVLGDGVESVML-IKYERLLDFCFRCGLLGHTTKDCPDKPK 204

Query: 72  --ETAEEDLQYGVWLRGTANQRGNYGGRKGGRESNKNRGHIDTIIKDDNGSWQFTGIHGH 131
             ET +EDL +G W+R     +G +GGR+   +S  N+      +  + GSW+     G 
Sbjct: 205 SLETTKEDLLFGFWMRVVVPYKGGFGGRRWTADSQSNKE-----LTSNRGSWRNMSREGA 264

Query: 132 SSGDRR 135
           S  D R
Sbjct: 265 SREDGR 264

BLAST of Sgr016865 vs. ExPASy TrEMBL
Match: A0A6J1DU55 (uncharacterized protein LOC111023135 OS=Momordica charantia OX=3673 GN=LOC111023135 PE=4 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 3.4e-13
Identity = 43/95 (45.26%), Postives = 56/95 (58.95%), Query Frame = 0

Query: 8   WGKTLRVRITIDVNKPLRRAIMIKVIGSMAEDTWIPITYEKLLDFCYACDWLGHVLKDWQ 67
           WG +LR+R+ ID+ KPLRR I I + G M    WIPI YE+L DFCY C  +GH   D  
Sbjct: 167 WGASLRIRVLIDITKPLRRGIKINIDGPMG-GCWIPIQYERLPDFCYFCGVIGHSSHDCD 226

Query: 68  SHSETAEED----LQYGVWLRGTANQRGNYGGRKG 99
           +    A++D     +YG WLR   ++ G   GRKG
Sbjct: 227 ARYLAAQDDSRATSEYGPWLRFVGSKAGAQKGRKG 260

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_010686122.15.5e-1832.51PREDICTED: uncharacterized protein LOC104900404 [Beta vulgaris subsp. vulgaris][more]
PPD83812.11.3e-1430.05hypothetical protein GOBAR_DD19246 [Gossypium barbadense][more]
PPD84469.13.7e-1427.01hypothetical protein GOBAR_DD18598 [Gossypium barbadense][more]
PPS08715.16.3e-1424.05hypothetical protein GOBAR_AA11939 [Gossypium barbadense][more]
XP_030923374.11.1e-1350.00uncharacterized protein LOC115950293 [Quercus lobata][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A2N9E9491.0e-1728.10CCHC-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS3389... [more]
A0A2P5XZD03.1e-1424.05CCHC-type domain-containing protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA1... [more]
A0A803LLP62.0e-1325.53Uncharacterized protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1[more]
A0A5C7GW092.6e-1338.10CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_02478... [more]
A0A6J1DU553.4e-1345.26uncharacterized protein LOC111023135 OS=Momordica charantia OX=3673 GN=LOC111023... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Monk fruit (Qingpiguo) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025836Zinc knuckle CX2CX4HX4CPFAMPF14392zf-CCHC_4coord: 18..65
e-value: 2.6E-10
score: 39.8
IPR036691Endonuclease/exonuclease/phosphatase superfamilyGENE3D3.60.10.10Endonuclease/exonuclease/phosphatasecoord: 51..189
e-value: 8.3E-6
score: 27.7
IPR036691Endonuclease/exonuclease/phosphatase superfamilySUPERFAMILY56219DNase I-likecoord: 73..188

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sgr016865.1Sgr016865.1mRNA