Sgr016185 (gene) Monk fruit (Qingpiguo) v1

Overview


Name	Sgr016185
Type	gene
Organism	Siraitia grosvenorii (Monk fruit (Qingpiguo) v1)
Description	60S ribosome subunit biogenesis protein NIP7 homolog
Location	tig00007724: 590551 .. 591114 (+)
RNA-Seq Expression	Sgr016185
Synteny	Sgr016185

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGACCTCTGGACGAGAAAGAAACAGCCGCGGTATTCGAAAAGCTCTTCAAATTTTCCGGAAACAACCTCAAGAACATCGTCGAGAATCCGTCTCACGAAGGACCCGACCCGAATCCGGGGCGCTACTGCTTCCGCCTCCAGAAGAACAAGGTGTACTACGTGAGCGATTCGCTGGTAAAGCGCGCCACCAACGTAGCTCGAAGCAACTTGGTCGCGCTCGGAACCTGCGTCGGCAAGTTCACCCACGGCGGCAGCTTCCACCTGACAATCCACTCGCTCGGATTGCTGGCTTCGAATGCGAAGCACAAGGTCTGGCTCAAGCCGACGTCGGAGATGTCGTTTCTGTACGGAAACCACGTTTTGAAAGGCGGATTGGGGAGAATTACGGAGAATATTCTGCCCGGCGATGGCGTCGTCGTTTACTCCATGTCGGATGTGCCGTTGGGGTTCGGTGTGGCGGCGAAGTCGACGCAAGATTGTAGGAAGTTGGATCCGAATGGAATCGTGGTGCTCCATCAGGCTGATATTGGGGAGTACTTGAGGATGGAAGATGAGCTTTGA

mRNA sequence

ATGAGACCTCTGGACGAGAAAGAAACAGCCGCGGTATTCGAAAAGCTCTTCAAATTTTCCGGAAACAACCTCAAGAACATCGTCGAGAATCCGTCTCACGAAGGACCCGACCCGAATCCGGGGCGCTACTGCTTCCGCCTCCAGAAGAACAAGGTGTACTACGTGAGCGATTCGCTGGTAAAGCGCGCCACCAACGTAGCTCGAAGCAACTTGGTCGCGCTCGGAACCTGCGTCGGCAAGTTCACCCACGGCGGCAGCTTCCACCTGACAATCCACTCGCTCGGATTGCTGGCTTCGAATGCGAAGCACAAGGTCTGGCTCAAGCCGACGTCGGAGATGTCGTTTCTGTACGGAAACCACGTTTTGAAAGGCGGATTGGGGAGAATTACGGAGAATATTCTGCCCGGCGATGGCGTCGTCGTTTACTCCATGTCGGATGTGCCGTTGGGGTTCGGTGTGGCGGCGAAGTCGACGCAAGATTGTAGGAAGTTGGATCCGAATGGAATCGTGGTGCTCCATCAGGCTGATATTGGGGAGTACTTGAGGATGGAAGATGAGCTTTGA

Coding sequence (CDS)

ATGAGACCTCTGGACGAGAAAGAAACAGCCGCGGTATTCGAAAAGCTCTTCAAATTTTCCGGAAACAACCTCAAGAACATCGTCGAGAATCCGTCTCACGAAGGACCCGACCCGAATCCGGGGCGCTACTGCTTCCGCCTCCAGAAGAACAAGGTGTACTACGTGAGCGATTCGCTGGTAAAGCGCGCCACCAACGTAGCTCGAAGCAACTTGGTCGCGCTCGGAACCTGCGTCGGCAAGTTCACCCACGGCGGCAGCTTCCACCTGACAATCCACTCGCTCGGATTGCTGGCTTCGAATGCGAAGCACAAGGTCTGGCTCAAGCCGACGTCGGAGATGTCGTTTCTGTACGGAAACCACGTTTTGAAAGGCGGATTGGGGAGAATTACGGAGAATATTCTGCCCGGCGATGGCGTCGTCGTTTACTCCATGTCGGATGTGCCGTTGGGGTTCGGTGTGGCGGCGAAGTCGACGCAAGATTGTAGGAAGTTGGATCCGAATGGAATCGTGGTGCTCCATCAGGCTGATATTGGGGAGTACTTGAGGATGGAAGATGAGCTTTGA

Protein sequence

MRPLDEKETAAVFEKLFKFSGNNLKNIVENPSHEGPDPNPGRYCFRLQKNKVYYVSDSLVKRATNVARSNLVALGTCVGKFTHGGSFHLTIHSLGLLASNAKHKVWLKPTSEMSFLYGNHVLKGGLGRITENILPGDGVVVYSMSDVPLGFGVAAKSTQDCRKLDPNGIVVLHQADIGEYLRMEDEL

Homology

[Close]

BLAST of Sgr016185 vs. NCBI nr
Match: XP_023528444.1 (60S ribosome subunit biogenesis protein NIP7 homolog [Cucurbita pepo subsp. pepo] >XP_023528446.1 60S ribosome subunit biogenesis protein NIP7 homolog [Cucurbita pepo subsp. pepo] >XP_023528447.1 60S ribosome subunit biogenesis protein NIP7 homolog [Cucurbita pepo subsp. pepo] >XP_023528448.1 60S ribosome subunit biogenesis protein NIP7 homolog [Cucurbita pepo subsp. pepo] >XP_023528449.1 60S ribosome subunit biogenesis protein NIP7 homolog [Cucurbita pepo subsp. pepo] >XP_023528450.1 60S ribosome subunit biogenesis protein NIP7 homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 370.9 bits (951), Expect = 6.3e-99
Identity = 176/187 (94.12%), Postives = 182/187 (97.33%), Query Frame = 0


Query: 1   MRPLDEKETAAVFEKLFKFSGNNLKNIVENPSHEGPDPNPGRYCFRLQKNKVYYVSDSLV 60
           MRPLDEKET AVFEKL KF+GNNLKNIVENPSHEGP PNPGRYCFRL KNKVYYVSDSLV
Sbjct: 25  MRPLDEKETTAVFEKLHKFTGNNLKNIVENPSHEGPGPNPGRYCFRLHKNKVYYVSDSLV 84

Query: 61  KRATNVARSNLVALGTCVGKFTHGGSFHLTIHSLGLLASNAKHKVWLKPTSEMSFLYGNH 120
           KRATNVARSNLVALGTC+GKFTHGGSFHLT+HSLGLL+SNAKHKVWLKPTSEMSFLYGNH
Sbjct: 85  KRATNVARSNLVALGTCIGKFTHGGSFHLTVHSLGLLSSNAKHKVWLKPTSEMSFLYGNH 144

Query: 121 VLKGGLGRITENILPGDGVVVYSMSDVPLGFGVAAKSTQDCRKLDPNGIVVLHQADIGEY 180
           VLKGGLGRITENI PGDGVVVYSMSDVPLGFG+AAKSTQDCRKLDPNGIVVLHQ+DIGEY
Sbjct: 145 VLKGGLGRITENIAPGDGVVVYSMSDVPLGFGIAAKSTQDCRKLDPNGIVVLHQSDIGEY 204

Query: 181 LRMEDEL 188
           LRMEDEL
Sbjct: 205 LRMEDEL 211

[Close]

BLAST of Sgr016185 vs. NCBI nr
Match: KAG6582220.1 (60S ribosome subunit biogenesis protein NIP7-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 368.2 bits (944), Expect = 4.1e-98
Identity = 175/187 (93.58%), Postives = 182/187 (97.33%), Query Frame = 0


Query: 1   MRPLDEKETAAVFEKLFKFSGNNLKNIVENPSHEGPDPNPGRYCFRLQKNKVYYVSDSLV 60
           MRPLDEKET AVFEKL KF+GNNLKNIVENPSHEGP+ NPGRYCFRL KNKVYYVSDSLV
Sbjct: 1   MRPLDEKETTAVFEKLHKFTGNNLKNIVENPSHEGPELNPGRYCFRLHKNKVYYVSDSLV 60

Query: 61  KRATNVARSNLVALGTCVGKFTHGGSFHLTIHSLGLLASNAKHKVWLKPTSEMSFLYGNH 120
           KRATNVARSNLVALGTC+GKFTHGGSFHLT+HSLGLL+SNAKHKVWLKPTSEMSFLYGNH
Sbjct: 61  KRATNVARSNLVALGTCIGKFTHGGSFHLTVHSLGLLSSNAKHKVWLKPTSEMSFLYGNH 120

Query: 121 VLKGGLGRITENILPGDGVVVYSMSDVPLGFGVAAKSTQDCRKLDPNGIVVLHQADIGEY 180
           VLKGGLGRITENI PGDGVVVYSMSDVPLGFG+AAKSTQDCRKLDPNGIVVLHQ+DIGEY
Sbjct: 121 VLKGGLGRITENIAPGDGVVVYSMSDVPLGFGIAAKSTQDCRKLDPNGIVVLHQSDIGEY 180

Query: 181 LRMEDEL 188
           LRMEDEL
Sbjct: 181 LRMEDEL 187

[Close]

BLAST of Sgr016185 vs. NCBI nr
Match: XP_022956278.1 (60S ribosome subunit biogenesis protein NIP7 homolog [Cucurbita moschata] >XP_022956279.1 60S ribosome subunit biogenesis protein NIP7 homolog [Cucurbita moschata] >XP_022956280.1 60S ribosome subunit biogenesis protein NIP7 homolog [Cucurbita moschata] >XP_022956281.1 60S ribosome subunit biogenesis protein NIP7 homolog [Cucurbita moschata] >XP_022956282.1 60S ribosome subunit biogenesis protein NIP7 homolog [Cucurbita moschata] >XP_022956283.1 60S ribosome subunit biogenesis protein NIP7 homolog [Cucurbita moschata] >XP_022956284.1 60S ribosome subunit biogenesis protein NIP7 homolog [Cucurbita moschata])

HSP 1 Score: 367.9 bits (943), Expect = 5.4e-98
Identity = 175/187 (93.58%), Postives = 181/187 (96.79%), Query Frame = 0


Query: 1   MRPLDEKETAAVFEKLFKFSGNNLKNIVENPSHEGPDPNPGRYCFRLQKNKVYYVSDSLV 60
           MRPLDEKET AVFEKL KF+GNNLKNIVENPSHEGP+ NPGRYCFRL KNKVYYVSDSLV
Sbjct: 1   MRPLDEKETTAVFEKLHKFTGNNLKNIVENPSHEGPELNPGRYCFRLHKNKVYYVSDSLV 60

Query: 61  KRATNVARSNLVALGTCVGKFTHGGSFHLTIHSLGLLASNAKHKVWLKPTSEMSFLYGNH 120
           KRATNVARSNLVALGTC+GKFTHGGSFHLT+HSLGLLASNAKHKVWLKPTSEMSFLYGNH
Sbjct: 61  KRATNVARSNLVALGTCIGKFTHGGSFHLTVHSLGLLASNAKHKVWLKPTSEMSFLYGNH 120

Query: 121 VLKGGLGRITENILPGDGVVVYSMSDVPLGFGVAAKSTQDCRKLDPNGIVVLHQADIGEY 180
           VLKGGLGRITENI PGDGVVVYSMSDVPLGFG+A KSTQDCRKLDPNGIVVLHQ+DIGEY
Sbjct: 121 VLKGGLGRITENIAPGDGVVVYSMSDVPLGFGIATKSTQDCRKLDPNGIVVLHQSDIGEY 180

Query: 181 LRMEDEL 188
           LRMEDEL
Sbjct: 181 LRMEDEL 187

[Close]

BLAST of Sgr016185 vs. NCBI nr
Match: XP_038878449.1 (60S ribosome subunit biogenesis protein NIP7 homolog [Benincasa hispida])

HSP 1 Score: 367.1 bits (941), Expect = 9.1e-98
Identity = 174/187 (93.05%), Postives = 181/187 (96.79%), Query Frame = 0


Query: 1   MRPLDEKETAAVFEKLFKFSGNNLKNIVENPSHEGPDPNPGRYCFRLQKNKVYYVSDSLV 60
           MRPLDE+ET  VFEKL KF+GNNLKNIVENPSHEGP+PNPGRYCFRL KNKVYYVSDSLV
Sbjct: 1   MRPLDEQETTVVFEKLHKFTGNNLKNIVENPSHEGPEPNPGRYCFRLHKNKVYYVSDSLV 60

Query: 61  KRATNVARSNLVALGTCVGKFTHGGSFHLTIHSLGLLASNAKHKVWLKPTSEMSFLYGNH 120
           KRATNVARSNLVALGTC+GKFTHGGSFHLT+HSLGLL+ NAKHKVWLKPTSEMSFLYGNH
Sbjct: 61  KRATNVARSNLVALGTCIGKFTHGGSFHLTVHSLGLLSPNAKHKVWLKPTSEMSFLYGNH 120

Query: 121 VLKGGLGRITENILPGDGVVVYSMSDVPLGFGVAAKSTQDCRKLDPNGIVVLHQADIGEY 180
           VLKGGLGRITENI PGDGVVVYSMSDVPLGFGVAAKSTQDCRKLDPNGIVVLHQ+DIGEY
Sbjct: 121 VLKGGLGRITENISPGDGVVVYSMSDVPLGFGVAAKSTQDCRKLDPNGIVVLHQSDIGEY 180

Query: 181 LRMEDEL 188
           LRMEDEL
Sbjct: 181 LRMEDEL 187

[Close]

BLAST of Sgr016185 vs. NCBI nr
Match: XP_022979935.1 (60S ribosome subunit biogenesis protein NIP7 homolog [Cucurbita maxima] >XP_022979936.1 60S ribosome subunit biogenesis protein NIP7 homolog [Cucurbita maxima] >XP_022979937.1 60S ribosome subunit biogenesis protein NIP7 homolog [Cucurbita maxima] >XP_022979939.1 60S ribosome subunit biogenesis protein NIP7 homolog [Cucurbita maxima] >XP_022979940.1 60S ribosome subunit biogenesis protein NIP7 homolog [Cucurbita maxima] >XP_022979941.1 60S ribosome subunit biogenesis protein NIP7 homolog [Cucurbita maxima])

HSP 1 Score: 366.7 bits (940), Expect = 1.2e-97
Identity = 174/187 (93.05%), Postives = 181/187 (96.79%), Query Frame = 0


Query: 1   MRPLDEKETAAVFEKLFKFSGNNLKNIVENPSHEGPDPNPGRYCFRLQKNKVYYVSDSLV 60
           MRPLDEKET AVFEKL KF+GNNLKNIVENPSHEGP+ NPGRYCFRL KNKVYYVSDSLV
Sbjct: 1   MRPLDEKETTAVFEKLHKFTGNNLKNIVENPSHEGPELNPGRYCFRLHKNKVYYVSDSLV 60

Query: 61  KRATNVARSNLVALGTCVGKFTHGGSFHLTIHSLGLLASNAKHKVWLKPTSEMSFLYGNH 120
           KRATNVARSNLV LGTC+GKFTHGGSFHLT+HSLGLL+SNAKHKVWLKPTSEMSFLYGNH
Sbjct: 61  KRATNVARSNLVVLGTCIGKFTHGGSFHLTVHSLGLLSSNAKHKVWLKPTSEMSFLYGNH 120

Query: 121 VLKGGLGRITENILPGDGVVVYSMSDVPLGFGVAAKSTQDCRKLDPNGIVVLHQADIGEY 180
           VLKGGLGRITENI PGDGVVVYSMSDVPLGFG+AAKSTQDCRKLDPNGIVVLHQ+DIGEY
Sbjct: 121 VLKGGLGRITENIAPGDGVVVYSMSDVPLGFGIAAKSTQDCRKLDPNGIVVLHQSDIGEY 180

Query: 181 LRMEDEL 188
           LRMEDEL
Sbjct: 181 LRMEDEL 187

[Close]

BLAST of Sgr016185 vs. ExPASy Swiss-Prot
Match: A4QND5 (60S ribosome subunit biogenesis protein NIP7 homolog OS=Xenopus tropicalis OX=8364 GN=nip7 PE=2 SV=1)

HSP 1 Score: 234.6 bits (597), Expect = 9.3e-61
Identity = 115/187 (61.50%), Postives = 139/187 (74.33%), Query Frame = 0


Query: 1   MRPLDEKETAAVFEKLFKFSGNNLKNIVENPSHEGPDPNPGRYCFRLQKNKVYYVSDSLV 60
           MRPL ++ET A+FEKL K+ G N+K +V+ P         G YCFRL  ++VYYVS+ ++
Sbjct: 1   MRPLTDEETKAMFEKLSKYIGENIKLLVDRPD--------GTYCFRLHNDRVYYVSERIL 60

Query: 61  KRATNVARSNLVALGTCVGKFTHGGSFHLTIHSLGLLASNAKHKVWLKPTSEMSFLYGNH 120
           K ATN+AR  LV+LGTC GKFT    F L + +L  LA  AK+KVW+KP +E SFLYGNH
Sbjct: 61  KLATNIARDKLVSLGTCFGKFTKTHKFRLHVTALDYLAPYAKYKVWVKPGAEQSFLYGNH 120

Query: 121 VLKGGLGRITENILPGDGVVVYSMSDVPLGFGVAAKSTQDCRKLDPNGIVVLHQADIGEY 180
           VLK GLGRITEN     GVVVYSM+D+PLGFGVAAKSTQ+CRKLDP  IVV HQAD+GEY
Sbjct: 121 VLKSGLGRITENTSQYQGVVVYSMADIPLGFGVAAKSTQECRKLDPMAIVVFHQADVGEY 179

Query: 181 LRMEDEL 188
           +R ED L
Sbjct: 181 IRHEDTL 179

[Close]

BLAST of Sgr016185 vs. ExPASy Swiss-Prot
Match: Q6DFH9 (60S ribosome subunit biogenesis protein NIP7 homolog OS=Xenopus laevis OX=8355 GN=nip7 PE=2 SV=1)

HSP 1 Score: 233.8 bits (595), Expect = 1.6e-60
Identity = 115/187 (61.50%), Postives = 138/187 (73.80%), Query Frame = 0


Query: 1   MRPLDEKETAAVFEKLFKFSGNNLKNIVENPSHEGPDPNPGRYCFRLQKNKVYYVSDSLV 60
           MRPL ++ET A+FEKL K+ G N+K +V+ P         G YCFRL  ++VYYVS+ ++
Sbjct: 1   MRPLTDEETRAMFEKLSKYIGENIKLLVDRPD--------GTYCFRLHNDRVYYVSEKIL 60

Query: 61  KRATNVARSNLVALGTCVGKFTHGGSFHLTIHSLGLLASNAKHKVWLKPTSEMSFLYGNH 120
           K ATN+AR  LV+ GTC GKFT    F L + +L  LA  AK+KVW+KP +E SFLYGNH
Sbjct: 61  KLATNIARDKLVSFGTCFGKFTKTQKFRLHVTALDYLAPYAKYKVWVKPGAEQSFLYGNH 120

Query: 121 VLKGGLGRITENILPGDGVVVYSMSDVPLGFGVAAKSTQDCRKLDPNGIVVLHQADIGEY 180
           VLK GLGRITEN     GVVVYSM+DVPLGFGVAAKSTQ+CRKLDP  IVV HQAD+GEY
Sbjct: 121 VLKSGLGRITENTSQYQGVVVYSMADVPLGFGVAAKSTQECRKLDPMAIVVFHQADVGEY 179

Query: 181 LRMEDEL 188
           +R ED L
Sbjct: 181 IRHEDTL 179

[Close]

BLAST of Sgr016185 vs. ExPASy Swiss-Prot
Match: Q4T2X8 (60S ribosome subunit biogenesis protein NIP7 homolog OS=Tetraodon nigroviridis OX=99883 GN=nip7 PE=3 SV=1)

HSP 1 Score: 229.6 bits (584), Expect = 3.0e-59
Identity = 112/187 (59.89%), Postives = 137/187 (73.26%), Query Frame = 0


Query: 1   MRPLDEKETAAVFEKLFKFSGNNLKNIVENPSHEGPDPNPGRYCFRLQKNKVYYVSDSLV 60
           MRPL E+ET  +FEKL K+ G N+K +V+ P         G YCFRL  ++VYY+S+ ++
Sbjct: 1   MRPLTEEETKTMFEKLSKYIGENIKLLVDRPD--------GTYCFRLHNDRVYYMSERIL 60

Query: 61  KRATNVARSNLVALGTCVGKFTHGGSFHLTIHSLGLLASNAKHKVWLKPTSEMSFLYGNH 120
           K ATN+AR  LV++GTC GKFT    F L I +L  LA  AK KVW+KP +E SFLYGNH
Sbjct: 61  KLATNIARQKLVSVGTCFGKFTKTSKFRLHITALDFLAPYAKFKVWVKPGAEQSFLYGNH 120

Query: 121 VLKGGLGRITENILPGDGVVVYSMSDVPLGFGVAAKSTQDCRKLDPNGIVVLHQADIGEY 180
           VLK GLGRITEN     GVVVYSM+DVPLGFGVAAKSTQ+CR++DP  IVV HQAD+GE+
Sbjct: 121 VLKSGLGRITENTAQYQGVVVYSMADVPLGFGVAAKSTQECRRVDPMSIVVFHQADVGEF 179

Query: 181 LRMEDEL 188
           +R ED L
Sbjct: 181 IRNEDSL 179

[Close]

BLAST of Sgr016185 vs. ExPASy Swiss-Prot
Match: Q9WV50 (60S ribosome subunit biogenesis protein NIP7 homolog OS=Rattus norvegicus OX=10116 GN=Nip7 PE=2 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 1.5e-58
Identity = 112/187 (59.89%), Postives = 136/187 (72.73%), Query Frame = 0


Query: 1   MRPLDEKETAAVFEKLFKFSGNNLKNIVENPSHEGPDPNPGRYCFRLQKNKVYYVSDSLV 60
           MRPL E+ET  +FEK+ K+ G NL+ +V+ P         G YCFRL  ++VYYVS+ ++
Sbjct: 1   MRPLTEEETRVMFEKIAKYIGENLQLLVDRPD--------GTYCFRLHNDRVYYVSEMIL 60

Query: 61  KRATNVARSNLVALGTCVGKFTHGGSFHLTIHSLGLLASNAKHKVWLKPTSEMSFLYGNH 120
           K A N++   LV+LGTC GKFT    F L + +L  LA  AK+KVW+KP +E SFLYGNH
Sbjct: 61  KLAANISGDKLVSLGTCFGKFTKTHKFRLHVTALDFLAPYAKYKVWIKPGAEQSFLYGNH 120

Query: 121 VLKGGLGRITENILPGDGVVVYSMSDVPLGFGVAAKSTQDCRKLDPNGIVVLHQADIGEY 180
           VLK GLGRITEN     GVVVYSM+DVPLGFGVAAKSTQDCRK+DP  IVV HQADIGEY
Sbjct: 121 VLKSGLGRITENTSQYQGVVVYSMADVPLGFGVAAKSTQDCRKVDPMAIVVFHQADIGEY 179

Query: 181 LRMEDEL 188
           +R E+ L
Sbjct: 181 IRHEETL 179

[Close]

BLAST of Sgr016185 vs. ExPASy Swiss-Prot
Match: Q9Y221 (60S ribosome subunit biogenesis protein NIP7 homolog OS=Homo sapiens OX=9606 GN=NIP7 PE=1 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 2.5e-58
Identity = 111/187 (59.36%), Postives = 136/187 (72.73%), Query Frame = 0


Query: 1   MRPLDEKETAAVFEKLFKFSGNNLKNIVENPSHEGPDPNPGRYCFRLQKNKVYYVSDSLV 60
           MRPL E+ET  +FEK+ K+ G NL+ +V+ P         G YCFRL  ++VYYVS+ ++
Sbjct: 1   MRPLTEEETRVMFEKIAKYIGENLQLLVDRPD--------GTYCFRLHNDRVYYVSEKIM 60

Query: 61  KRATNVARSNLVALGTCVGKFTHGGSFHLTIHSLGLLASNAKHKVWLKPTSEMSFLYGNH 120
           K A N++   LV+LGTC GKFT    F L + +L  LA  AK+KVW+KP +E SFLYGNH
Sbjct: 61  KLAANISGDKLVSLGTCFGKFTKTHKFRLHVTALDYLAPYAKYKVWIKPGAEQSFLYGNH 120

Query: 121 VLKGGLGRITENILPGDGVVVYSMSDVPLGFGVAAKSTQDCRKLDPNGIVVLHQADIGEY 180
           VLK GLGRITEN     GVVVYSM+D+PLGFGVAAKSTQDCRK+DP  IVV HQADIGEY
Sbjct: 121 VLKSGLGRITENTSQYQGVVVYSMADIPLGFGVAAKSTQDCRKVDPMAIVVFHQADIGEY 179

Query: 181 LRMEDEL 188
           +R E+ L
Sbjct: 181 VRHEETL 179

[Close]

BLAST of Sgr016185 vs. ExPASy TrEMBL
Match: A0A6J1GYK7 (60S ribosome subunit biogenesis protein NIP7 homolog OS=Cucurbita moschata OX=3662 GN=LOC111458029 PE=3 SV=1)

HSP 1 Score: 367.9 bits (943), Expect = 2.6e-98
Identity = 175/187 (93.58%), Postives = 181/187 (96.79%), Query Frame = 0


Query: 1   MRPLDEKETAAVFEKLFKFSGNNLKNIVENPSHEGPDPNPGRYCFRLQKNKVYYVSDSLV 60
           MRPLDEKET AVFEKL KF+GNNLKNIVENPSHEGP+ NPGRYCFRL KNKVYYVSDSLV
Sbjct: 1   MRPLDEKETTAVFEKLHKFTGNNLKNIVENPSHEGPELNPGRYCFRLHKNKVYYVSDSLV 60

Query: 61  KRATNVARSNLVALGTCVGKFTHGGSFHLTIHSLGLLASNAKHKVWLKPTSEMSFLYGNH 120
           KRATNVARSNLVALGTC+GKFTHGGSFHLT+HSLGLLASNAKHKVWLKPTSEMSFLYGNH
Sbjct: 61  KRATNVARSNLVALGTCIGKFTHGGSFHLTVHSLGLLASNAKHKVWLKPTSEMSFLYGNH 120

Query: 121 VLKGGLGRITENILPGDGVVVYSMSDVPLGFGVAAKSTQDCRKLDPNGIVVLHQADIGEY 180
           VLKGGLGRITENI PGDGVVVYSMSDVPLGFG+A KSTQDCRKLDPNGIVVLHQ+DIGEY
Sbjct: 121 VLKGGLGRITENIAPGDGVVVYSMSDVPLGFGIATKSTQDCRKLDPNGIVVLHQSDIGEY 180

Query: 181 LRMEDEL 188
           LRMEDEL
Sbjct: 181 LRMEDEL 187

[Close]

BLAST of Sgr016185 vs. ExPASy TrEMBL
Match: A0A6J1IQ28 (60S ribosome subunit biogenesis protein NIP7 homolog OS=Cucurbita maxima OX=3661 GN=LOC111479477 PE=3 SV=1)

HSP 1 Score: 366.7 bits (940), Expect = 5.8e-98
Identity = 174/187 (93.05%), Postives = 181/187 (96.79%), Query Frame = 0


Query: 1   MRPLDEKETAAVFEKLFKFSGNNLKNIVENPSHEGPDPNPGRYCFRLQKNKVYYVSDSLV 60
           MRPLDEKET AVFEKL KF+GNNLKNIVENPSHEGP+ NPGRYCFRL KNKVYYVSDSLV
Sbjct: 1   MRPLDEKETTAVFEKLHKFTGNNLKNIVENPSHEGPELNPGRYCFRLHKNKVYYVSDSLV 60

Query: 61  KRATNVARSNLVALGTCVGKFTHGGSFHLTIHSLGLLASNAKHKVWLKPTSEMSFLYGNH 120
           KRATNVARSNLV LGTC+GKFTHGGSFHLT+HSLGLL+SNAKHKVWLKPTSEMSFLYGNH
Sbjct: 61  KRATNVARSNLVVLGTCIGKFTHGGSFHLTVHSLGLLSSNAKHKVWLKPTSEMSFLYGNH 120

Query: 121 VLKGGLGRITENILPGDGVVVYSMSDVPLGFGVAAKSTQDCRKLDPNGIVVLHQADIGEY 180
           VLKGGLGRITENI PGDGVVVYSMSDVPLGFG+AAKSTQDCRKLDPNGIVVLHQ+DIGEY
Sbjct: 121 VLKGGLGRITENIAPGDGVVVYSMSDVPLGFGIAAKSTQDCRKLDPNGIVVLHQSDIGEY 180

Query: 181 LRMEDEL 188
           LRMEDEL
Sbjct: 181 LRMEDEL 187

[Close]

BLAST of Sgr016185 vs. ExPASy TrEMBL
Match: A0A6J1I8G6 (60S ribosome subunit biogenesis protein NIP7 homolog OS=Cucurbita maxima OX=3661 GN=LOC111472343 PE=3 SV=1)

HSP 1 Score: 364.0 bits (933), Expect = 3.7e-97
Identity = 170/187 (90.91%), Postives = 182/187 (97.33%), Query Frame = 0


Query: 1   MRPLDEKETAAVFEKLFKFSGNNLKNIVENPSHEGPDPNPGRYCFRLQKNKVYYVSDSLV 60
           MRPLDEKET AVFEKL KF+GNNLKNIVENP+HEGP+ NPGRYCFRL KNKVYYVSDSLV
Sbjct: 1   MRPLDEKETTAVFEKLHKFTGNNLKNIVENPAHEGPEQNPGRYCFRLHKNKVYYVSDSLV 60

Query: 61  KRATNVARSNLVALGTCVGKFTHGGSFHLTIHSLGLLASNAKHKVWLKPTSEMSFLYGNH 120
           KRATNVAR+NLVALGTC+GKFTHGGSFHLT+HSLGLL++NA+HKVWLKPTSEMSFLYGNH
Sbjct: 61  KRATNVARNNLVALGTCIGKFTHGGSFHLTVHSLGLLSANARHKVWLKPTSEMSFLYGNH 120

Query: 121 VLKGGLGRITENILPGDGVVVYSMSDVPLGFGVAAKSTQDCRKLDPNGIVVLHQADIGEY 180
           VLKGGLGRITENI PGDGVVVYSMSD+PLGFG+AAKSTQDCRKLDPNGIVVLHQ+DIGEY
Sbjct: 121 VLKGGLGRITENIAPGDGVVVYSMSDIPLGFGIAAKSTQDCRKLDPNGIVVLHQSDIGEY 180

Query: 181 LRMEDEL 188
           LRMEDEL
Sbjct: 181 LRMEDEL 187

[Close]

BLAST of Sgr016185 vs. ExPASy TrEMBL
Match: A0A6J1G8L8 (60S ribosome subunit biogenesis protein NIP7 homolog OS=Cucurbita moschata OX=3662 GN=LOC111451723 PE=3 SV=1)

HSP 1 Score: 363.2 bits (931), Expect = 6.4e-97
Identity = 170/187 (90.91%), Postives = 182/187 (97.33%), Query Frame = 0


Query: 1   MRPLDEKETAAVFEKLFKFSGNNLKNIVENPSHEGPDPNPGRYCFRLQKNKVYYVSDSLV 60
           MRPLDEKET AVFEKL KF+GNNLKNIVENP+HEGP+ NPGRYCFRL KNKVYYVSDSLV
Sbjct: 1   MRPLDEKETTAVFEKLHKFTGNNLKNIVENPAHEGPEQNPGRYCFRLHKNKVYYVSDSLV 60

Query: 61  KRATNVARSNLVALGTCVGKFTHGGSFHLTIHSLGLLASNAKHKVWLKPTSEMSFLYGNH 120
           KRATNVAR+NLVALGTC+GKFTHGGSFHLT+H+LGLL++NA+HKVWLKPTSEMSFLYGNH
Sbjct: 61  KRATNVARNNLVALGTCIGKFTHGGSFHLTVHALGLLSANARHKVWLKPTSEMSFLYGNH 120

Query: 121 VLKGGLGRITENILPGDGVVVYSMSDVPLGFGVAAKSTQDCRKLDPNGIVVLHQADIGEY 180
           VLKGGLGRITENI PGDGVVVYSMSDVPLGFG+AAKSTQDCRKLDPNGIVVLHQ+DIGEY
Sbjct: 121 VLKGGLGRITENIAPGDGVVVYSMSDVPLGFGIAAKSTQDCRKLDPNGIVVLHQSDIGEY 180

Query: 181 LRMEDEL 188
           LRMEDEL
Sbjct: 181 LRMEDEL 187

[Close]

BLAST of Sgr016185 vs. ExPASy TrEMBL
Match: A0A6J1C974 (60S ribosome subunit biogenesis protein NIP7 homolog OS=Momordica charantia OX=3673 GN=LOC111009133 PE=3 SV=1)

HSP 1 Score: 362.8 bits (930), Expect = 8.3e-97
Identity = 172/187 (91.98%), Postives = 179/187 (95.72%), Query Frame = 0


Query: 1   MRPLDEKETAAVFEKLFKFSGNNLKNIVENPSHEGPDPNPGRYCFRLQKNKVYYVSDSLV 60
           MRPLDEKET AVFEKL KF+GNNL+NIVENPSHEGP+PNPGRYCFRL KNKVYYVSDSLV
Sbjct: 1   MRPLDEKETTAVFEKLHKFTGNNLRNIVENPSHEGPEPNPGRYCFRLHKNKVYYVSDSLV 60

Query: 61  KRATNVARSNLVALGTCVGKFTHGGSFHLTIHSLGLLASNAKHKVWLKPTSEMSFLYGNH 120
           KRATNVAR NLVALGTC+GK THGGSFHLT+ SLGLLA NAKHKVWLKPTSEMSFLYGNH
Sbjct: 61  KRATNVARRNLVALGTCIGKITHGGSFHLTVQSLGLLAPNAKHKVWLKPTSEMSFLYGNH 120

Query: 121 VLKGGLGRITENILPGDGVVVYSMSDVPLGFGVAAKSTQDCRKLDPNGIVVLHQADIGEY 180
           VLKGGLGRITENI PGDGVVVYSMSDVPLGFG+AAKSTQDCRKLDPNGIVVLHQ+DIGEY
Sbjct: 121 VLKGGLGRITENIAPGDGVVVYSMSDVPLGFGIAAKSTQDCRKLDPNGIVVLHQSDIGEY 180

Query: 181 LRMEDEL 188
           LRMEDEL
Sbjct: 181 LRMEDEL 187

[Close]

BLAST of Sgr016185 vs. TAIR 10
Match: AT4G15770.1 (RNA binding )

HSP 1 Score: 331.6 bits (849), Expect = 4.0e-91
Identity = 155/187 (82.89%), Postives = 172/187 (91.98%), Query Frame = 0


Query: 1   MRPLDEKETAAVFEKLFKFSGNNLKNIVENPSHEGPDPNPGRYCFRLQKNKVYYVSDSLV 60
           MRPLDE ET  VFEKLFKF GNNLK IVENPS EGP+  PG YCFRLQKN+VYYVS++LV
Sbjct: 1   MRPLDETETTVVFEKLFKFVGNNLKKIVENPSDEGPESTPGSYCFRLQKNRVYYVSEALV 60

Query: 61  KRATNVARSNLVALGTCVGKFTHGGSFHLTIHSLGLLASNAKHKVWLKPTSEMSFLYGNH 120
           KRATN++R NLV+ GTC+GK+TH GSFHLTI SL +LA+NAKHKVWLKPTSEMSFLYGNH
Sbjct: 61  KRATNISRKNLVSFGTCIGKYTHAGSFHLTIMSLNILAANAKHKVWLKPTSEMSFLYGNH 120

Query: 121 VLKGGLGRITENILPGDGVVVYSMSDVPLGFGVAAKSTQDCRKLDPNGIVVLHQADIGEY 180
           VLKGGLGRIT++I+PGDGVVV+SMSDVPLGFG+AAKSTQDCRKLDPNGIVVLHQADIGEY
Sbjct: 121 VLKGGLGRITDSIVPGDGVVVFSMSDVPLGFGIAAKSTQDCRKLDPNGIVVLHQADIGEY 180

Query: 181 LRMEDEL 188
           LR ED+L
Sbjct: 181 LRGEDDL 187

The following BLAST results are available for this feature:

BLAST of Sgr016185 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023528444.1	6.3e-99	94.12	60S ribosome subunit biogenesis protein NIP7 homolog [Cucurbita pepo subsp. pepo...	[more]
KAG6582220.1	4.1e-98	93.58	60S ribosome subunit biogenesis protein NIP7-like protein, partial [Cucurbita ar...	[more]
XP_022956278.1	5.4e-98	93.58	60S ribosome subunit biogenesis protein NIP7 homolog [Cucurbita moschata] >XP_02...	[more]
XP_038878449.1	9.1e-98	93.05	60S ribosome subunit biogenesis protein NIP7 homolog [Benincasa hispida]	[more]
XP_022979935.1	1.2e-97	93.05	60S ribosome subunit biogenesis protein NIP7 homolog [Cucurbita maxima] >XP_0229...	[more]

BLAST of Sgr016185 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A4QND5	9.3e-61	61.50	60S ribosome subunit biogenesis protein NIP7 homolog OS=Xenopus tropicalis OX=83...	[more]
Q6DFH9	1.6e-60	61.50	60S ribosome subunit biogenesis protein NIP7 homolog OS=Xenopus laevis OX=8355 G...	[more]
Q4T2X8	3.0e-59	59.89	60S ribosome subunit biogenesis protein NIP7 homolog OS=Tetraodon nigroviridis O...	[more]
Q9WV50	1.5e-58	59.89	60S ribosome subunit biogenesis protein NIP7 homolog OS=Rattus norvegicus OX=101...	[more]
Q9Y221	2.5e-58	59.36	60S ribosome subunit biogenesis protein NIP7 homolog OS=Homo sapiens OX=9606 GN=...	[more]

BLAST of Sgr016185 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GYK7	2.6e-98	93.58	60S ribosome subunit biogenesis protein NIP7 homolog OS=Cucurbita moschata OX=36...	[more]
A0A6J1IQ28	5.8e-98	93.05	60S ribosome subunit biogenesis protein NIP7 homolog OS=Cucurbita maxima OX=3661...	[more]
A0A6J1I8G6	3.7e-97	90.91	60S ribosome subunit biogenesis protein NIP7 homolog OS=Cucurbita maxima OX=3661...	[more]
A0A6J1G8L8	6.4e-97	90.91	60S ribosome subunit biogenesis protein NIP7 homolog OS=Cucurbita moschata OX=36...	[more]
A0A6J1C974	8.3e-97	91.98	60S ribosome subunit biogenesis protein NIP7 homolog OS=Momordica charantia OX=3...	[more]

BLAST of Sgr016185 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G15770.1	4.0e-91	82.89	RNA binding	[more]

InterPro

Analysis Name: InterPro Annotations of Monk fruit (Qingpiguo) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002478	PUA domain	SMART	SM00359	pua_5	coord: 103..178 e-value: 4.1E-17 score: 72.9
None	No IPR available	GENE3D	3.10.450.220		coord: 1..101 e-value: 3.5E-36 score: 125.1
None	No IPR available	PANTHER	PTHR23415	CYCLIN-DEPENDENT KINASES REGULATORY SUBUNIT/60S RIBOSOME SUBUNIT BIOGENESIS PROTEIN NIP7	coord: 1..187
None	No IPR available	PANTHER	PTHR23415:SF4	60S RIBOSOME SUBUNIT BIOGENESIS PROTEIN NIP7 HOMOLOG	coord: 1..187
None	No IPR available	PROSITE	PS50890	PUA	coord: 102..178 score: 14.342176
None	No IPR available	SUPERFAMILY	88802	Pre-PUA domain	coord: 1..101
IPR036974	PUA domain superfamily	GENE3D	2.30.130.10	PUA domain	coord: 102..187 e-value: 1.5E-41 score: 142.1
IPR016686	Ribosome biogenesis factor, NIP7	PIRSF	PIRSF017190	NIP7	coord: 1..187 e-value: 7.4E-78 score: 258.1
IPR005155	UPF0113, PUA domain	PFAM	PF03657	UPF0113	coord: 104..182 e-value: 2.2E-21 score: 75.9
IPR040598	UPF0113, pre-PUA domain	PFAM	PF17833	UPF0113_N	coord: 2..91 e-value: 1.2E-21 score: 77.0
IPR015947	PUA-like superfamily	SUPERFAMILY	88697	PUA domain-like	coord: 103..178

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sgr016185.1	Sgr016185.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042273	ribosomal large subunit biogenesis
biological_process	GO:0042255	ribosome assembly
cellular_component	GO:0005730	nucleolus
cellular_component	GO:0030687	preribosome, large subunit precursor
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003723	RNA binding