Sgr015174 (gene) Monk fruit (Qingpiguo) v1

Overview
NameSgr015174
Typegene
OrganismSiraitia grosvenorii (Monk fruit (Qingpiguo) v1)
DescriptionRibosome-recycling factor
Locationtig00003063: 443157 .. 445375 (+)
RNA-Seq ExpressionSgr015174
SyntenySgr015174
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAGCATCCATCAGCACAGAGAAGGGTCGGGAATGTGTCAAATCCTTCCGAAAGACATAGACTCAAAATAAGGCGCATTCCCTTTTGGCATTCTGGCCGTTCAGCCAAGGAAGAGTCACCAGTGGACTTTGTGTATGCTCGAAGCAATATGATCCACCAAAATCCAGAGTCAACTGGAGCAACTCTTCCTATTGCACTCTCTCCAAAATCTGCTATTAAAGTTTCACTGTTCCTCACTGGATCATGAAGCACTTTGAAACTAGCAGGCATCACCCCTTCTCCAAGCTGGAATCTGTCAATCTTTTTCTCCCATGACTGAAGGCGAAGTGTCTTTAAGATAAAGTTTTTTACTATTTCAGGCTCCCCATTCATTAGAAAAGCAAACGCGCTCGGAACAAAGTCTCTCACAAACACCTACATAAACAAAGAAAGTATTCGTATGTCAGCTTCTGCTTTGATTTGGATCAACACAAATCCCAGACTTGTAAGAGTGAAAAGAAGGTAAGGGGAGCCATGATATTAACACCTAAGCAATTATCAACGCATCTTAACAAGCACGGACACAGACGCATATACGACATGACATAGACACGTTAATTATAATATATGTTTTTAAAATATATATTATTTTAATACATTTCAATGACTATCGTACTAAAATTTTGTTTTAGTTTATGAAGCTTGGGCATTTATGATACAATGTTTTATGTCAAAATATAAAGATTGATTCAAACCAACTTATCAATTTTGCAAATGATTTAACATCTTGACAGGACGAAAATTTAAAGTCAATAGTACATATGCATTTACATGTCTTTCACTCTCAAAATGTTCGCAAGTGTTTGACCCGTGTTTCTTTCATTTAACAAGTGTTCAACACATTCCCAACAAGTGTGGGCTCTTATTTAATTTGTTCTAACTAGTGTGTAGCACGTGTCTAGTGTACTTAACAAGTGTCCGACACGTGTCGGAGTGTCAAACGCAAACACATTGTTCAAACTGAAGTGTCCATACTTCATAGGTACAAGAGTTAGACATTCCAAACCCATCCAAATGATAAAATGATTAACAAGGAAGATGAAAGGAAAAACAAATGTCCCAAATCTTATAAACTAGATAATTACTCCCATGCATTAACATCATTACAAGAATTTTCTAGTGATTTCTTATTTTAAACAATGCACAATTTGTTGTGAGTTTCAAAGTTTTAACAGAAGAAAACTTTCTGAACCATCACAAACTGATTTTCTATGCAAAAAATTACAAGCAAGAACATCCACTTTCGTGTACATTATAGTAAACACAACCAAAGCAGGATTGATCAATGAATTTAAGTAATTAATCATGAAGTGTTCTCACTTGATCATAATTAAGATTTTCTTCGGTACTGTCCAACGCAGCAATAGTGCCGACTGGTTGACCACGAAAATGGACCAACGAACGCCTCAAAGCTTCCCAAGCTTCGGCCACCATGGGATGCTGCTCGAATCCTTGCTGTGATCTCGGAGTGTTGAAATCTGATTTTCTGCCAGGAGATGGAGTCTGATCAAAATTTTCTGTCATTCGAGCAAAGTTCTCCGATGAAACTTTCGACGATAGCCGCGGGGAGAAACCAATAGCCAACTCCCCAAGCGATCTCTCGTCAAATGACCTCTGTCTCTCCATGTTCAGCGCCCTTGGCCTATCCAATAACTTCGAGAACTCGGATTCTTCAATCTCATCCACTGTGAATAAGCAATCGTTGCCTTTTACATTCCCATTCTGAGTCGGGTTCGATGAGGAAGTCGACATTTCCAGAGAACCTGAACACTCTGCAATTTTTCATTCATCGTTTCATCAACCGCAATTTTAACTAATCTCTAATGATTTCTCAGGTAACAGAGATCGGATTATACACAGAGCATCAAAATCAAAATCCAAGAGAAAAACGACCAAATGCAAATAGATTAACAACGATATCCATCGCGATACAGTACATAACACAAATGAACAAAACTCACCGGCGGATTTCTCAAACCCTTATGGAACCAACCAACCAACCAACCAACCAACCACCTTCAGAGATCAAAGGAAACGAAAATACGCAGGCTCCATGCAATAAAAAAATCAGGTGGTCAGAGCCAGCCCCGTCGTCCACCGGAGGGAGCCGGTAAGGCTCAGCTTGAGAATGCAGAGAGAGCGACCGCCATGATGGGGTTGGCGCGCTGCAGTGTCTGA

mRNA sequence

ATGCAGCATCCATCAGCACAGAGAAGGGTCGGGAATGTGTCAAATCCTTCCGAAAGACATAGACTCAAAATAAGGCGCATTCCCTTTTGGCATTCTGGCCGTTCAGCCAAGGAAGAGTCACCAGTGGACTTTGTGTATGCTCGAAGCAATATGATCCACCAAAATCCAGAGTCAACTGGAGCAACTCTTCCTATTGCACTCTCTCCAAAATCTGCTATTAAAGTAACAGAGATCGGATTATACACAGAGCATCAAAATCAAAATCCAAGAGAAAAACGACCAAATGCAAATAGATTAACAACGATATCCATCGCGATACAGCTCCATGCAATAAAAAAATCAGGTGGTCAGAGCCAGCCCCGTCGTCCACCGGAGGGAGCCGGTAAGGCTCAGCTTGAGAATGCAGAGAGAGCGACCGCCATGATGGGGTTGGCGCGCTGCAGTGTCTGA

Coding sequence (CDS)

ATGCAGCATCCATCAGCACAGAGAAGGGTCGGGAATGTGTCAAATCCTTCCGAAAGACATAGACTCAAAATAAGGCGCATTCCCTTTTGGCATTCTGGCCGTTCAGCCAAGGAAGAGTCACCAGTGGACTTTGTGTATGCTCGAAGCAATATGATCCACCAAAATCCAGAGTCAACTGGAGCAACTCTTCCTATTGCACTCTCTCCAAAATCTGCTATTAAAGTAACAGAGATCGGATTATACACAGAGCATCAAAATCAAAATCCAAGAGAAAAACGACCAAATGCAAATAGATTAACAACGATATCCATCGCGATACAGCTCCATGCAATAAAAAAATCAGGTGGTCAGAGCCAGCCCCGTCGTCCACCGGAGGGAGCCGGTAAGGCTCAGCTTGAGAATGCAGAGAGAGCGACCGCCATGATGGGGTTGGCGCGCTGCAGTGTCTGA

Protein sequence

MQHPSAQRRVGNVSNPSERHRLKIRRIPFWHSGRSAKEESPVDFVYARSNMIHQNPESTGATLPIALSPKSAIKVTEIGLYTEHQNQNPREKRPNANRLTTISIAIQLHAIKKSGGQSQPRRPPEGAGKAQLENAERATAMMGLARCSV
Homology
[Close]
BLAST of Sgr015174 vs. NCBI nr
Match: GER55253.1 (ribosome-recycling factor [Striga asiatica])

HSP 1 Score: 125.2 bits (313), Expect = 4.8e-25
Identity = 61/74 (82.43%), Postives = 65/74 (87.84%), Query Frame = 0 

Query: 3   HPSAQRRVGNVSNPSERHRLKIRRIPFWHSGRSAKEESPVDFVYARSNMIHQNPESTGAT 62
           HPSAQR VGNVSNPSERH+L+I  IPFWHSG SAKE SPVDFVYA S +IHQNPESTGAT
Sbjct: 98  HPSAQRSVGNVSNPSERHKLRISLIPFWHSGISAKEVSPVDFVYALSKIIHQNPESTGAT 157

Query: 63  LPIALSPKSAIKVT 77
           LPIALSPKSA  V+
Sbjct: 158 LPIALSPKSATNVS 171

[Close]
BLAST of Sgr015174 vs. NCBI nr
Match: KAB8087437.1 (hypothetical protein EE612_011678, partial [Oryza sativa] >BAS79161.1 Os02g0550650, partial [Oryza sativa Japonica Group])

HSP 1 Score: 113.6 bits (283), Expect = 1.5e-21
Identity = 55/76 (72.37%), Postives = 61/76 (80.26%), Query Frame = 0 

Query: 1  MQHPSAQRRVGNVSNPSERHRLKIRRIPFWHSGRSAKEESPVDFVYARSNMIHQNPESTG 60
          MQ PSA   VG VSNPS++HRL I  IPFWHSG SA   SPVD VYAR +MIHQNPESTG
Sbjct: 1  MQQPSAHSNVGKVSNPSDKHRLSISLIPFWHSGVSASVRSPVDLVYARRSMIHQNPESTG 60

Query: 61 ATLPIALSPKSAIKVT 77
          ATLP+ALSPKSA +V+
Sbjct: 61 ATLPMALSPKSACRVS 76

[Close]
BLAST of Sgr015174 vs. NCBI nr
Match: KAF7810810.1 (hypothetical protein G2W53_031786 [Senna tora])

HSP 1 Score: 78.2 bits (191), Expect = 6.8e-11
Identity = 38/43 (88.37%), Postives = 42/43 (97.67%), Query Frame = 0 

Query: 34 RSAKEESPVDFVYARSNMIHQNPESTGATLPIALSPKSAIKVT 77
          RSAKE SPVDFVYARS++IHQNPESTGATLPIALSPKSAI+V+
Sbjct: 50 RSAKEVSPVDFVYARSSIIHQNPESTGATLPIALSPKSAIRVS 92

[Close]
BLAST of Sgr015174 vs. NCBI nr
Match: KAB8081257.1 (hypothetical protein EE612_002292 [Oryza sativa] >BAS71919.1 Os01g0332150 [Oryza sativa Japonica Group])

HSP 1 Score: 75.5 bits (184), Expect = 4.4e-10
Identity = 42/77 (54.55%), Postives = 50/77 (64.94%), Query Frame = 0 

Query: 1  MQHPSAQRRVGNVSNPSERHRLKIRRIPFWHSGRSAKEESPVDFVYARSNMIHQN-PEST 60
          M  PS   +VGN+SNPS++H+LKI  +P   S  S    SPV   YA S +IHQN PEST
Sbjct: 1  MHDPSVTSKVGNISNPSDKHKLKISLMPVCTSTLSCSALSPVILQYALSKIIHQNLPEST 60

Query: 61 GATLPIALSPKSAIKVT 77
          GAT PIA SPKS  K +
Sbjct: 61 GATRPIADSPKSGSKTS 77

[Close]
BLAST of Sgr015174 vs. ExPASy TrEMBL
Match: A0A5A7RBW2 (Ribosome-recycling factor OS=Striga asiatica OX=4170 GN=STAS_32912 PE=4 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 2.3e-25
Identity = 61/74 (82.43%), Postives = 65/74 (87.84%), Query Frame = 0 

Query: 3   HPSAQRRVGNVSNPSERHRLKIRRIPFWHSGRSAKEESPVDFVYARSNMIHQNPESTGAT 62
           HPSAQR VGNVSNPSERH+L+I  IPFWHSG SAKE SPVDFVYA S +IHQNPESTGAT
Sbjct: 98  HPSAQRSVGNVSNPSERHKLRISLIPFWHSGISAKEVSPVDFVYALSKIIHQNPESTGAT 157

Query: 63  LPIALSPKSAIKVT 77
           LPIALSPKSA  V+
Sbjct: 158 LPIALSPKSATNVS 171

[Close]
BLAST of Sgr015174 vs. ExPASy TrEMBL
Match: A0A0N7KFG6 (Os02g0550650 protein (Fragment) OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0550650 PE=4 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 7.0e-22
Identity = 55/76 (72.37%), Postives = 61/76 (80.26%), Query Frame = 0 

Query: 1  MQHPSAQRRVGNVSNPSERHRLKIRRIPFWHSGRSAKEESPVDFVYARSNMIHQNPESTG 60
          MQ PSA   VG VSNPS++HRL I  IPFWHSG SA   SPVD VYAR +MIHQNPESTG
Sbjct: 1  MQQPSAHSNVGKVSNPSDKHRLSISLIPFWHSGVSASVRSPVDLVYARRSMIHQNPESTG 60

Query: 61 ATLPIALSPKSAIKVT 77
          ATLP+ALSPKSA +V+
Sbjct: 61 ATLPMALSPKSACRVS 76

[Close]
BLAST of Sgr015174 vs. ExPASy TrEMBL
Match: A0A0A9IXB3 (Uncharacterized protein OS=Arundo donax OX=35708 PE=4 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 5.0e-12
Identity = 42/78 (53.85%), Postives = 47/78 (60.26%), Query Frame = 0 

Query: 1  MQHPSAQRRVGNVSNPSERHRLKIRRIPFWHSGRSAKEESPVDFVYARSNMIHQNPESTG 60
          M  PS    VGN+S PS +   KI  IP W S  S  + SP  F YA SNMIHQ PESTG
Sbjct: 1  MHEPSVTSNVGNMSKPSAKQSFKIIFIPVWTSILSCTDRSPEHFPYALSNMIHQRPESTG 60

Query: 61 ATLPIALSPKSAIKVTEI 79
          AT PIA SPKS  K + +
Sbjct: 61 ATRPIAASPKSGSKTSSV 78

[Close]
BLAST of Sgr015174 vs. ExPASy TrEMBL
Match: A0A0A9GAM6 (Uncharacterized protein OS=Arundo donax OX=35708 PE=4 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 4.3e-11
Identity = 38/48 (79.17%), Postives = 40/48 (83.33%), Query Frame = 0 

Query: 29 FWHSGRSAKEESPVDFVYARSNMIHQNPESTGATLPIALSPKSAIKVT 77
          FWHSG S K  SPV FVYAR  +IHQNPESTGATLPIALSPKSA KV+
Sbjct: 3  FWHSGDSDKLASPVYFVYARRRIIHQNPESTGATLPIALSPKSATKVS 50

[Close]
BLAST of Sgr015174 vs. ExPASy TrEMBL
Match: A0A0A9DBZ3 (Uncharacterized protein OS=Arundo donax OX=35708 PE=4 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 5.6e-11
Identity = 40/78 (51.28%), Postives = 46/78 (58.97%), Query Frame = 0 

Query: 1  MQHPSAQRRVGNVSNPSERHRLKIRRIPFWHSGRSAKEESPVDFVYARSNMIHQNPESTG 60
          M  PS    VGN+S PS +   KI  IP W S  S  + SP  F YA SN+IH  PESTG
Sbjct: 1  MHEPSVTSNVGNMSKPSAKQSFKIIFIPVWTSILSCTDRSPEHFPYALSNIIHHRPESTG 60

Query: 61 ATLPIALSPKSAIKVTEI 79
          AT PIA SPKS  K + +
Sbjct: 61 ATRPIAASPKSGSKTSSV 78

The following BLAST results are available for this feature:
BLAST of Sgr015174 vs. NCBI nr
Match NameE-valueIdentityDescription
GER55253.14.8e-2582.43ribosome-recycling factor [Striga asiatica][more]
KAB8087437.11.5e-2172.37hypothetical protein EE612_011678, partial [Oryza sativa] >BAS79161.1 Os02g05506... [more]
KAF7810810.16.8e-1188.37hypothetical protein G2W53_031786 [Senna tora][more]
KAB8081257.14.4e-1054.55hypothetical protein EE612_002292 [Oryza sativa] >BAS71919.1 Os01g0332150 [Oryza... [more]
BLAST of Sgr015174 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Sgr015174 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7RBW22.3e-2582.43Ribosome-recycling factor OS=Striga asiatica OX=4170 GN=STAS_32912 PE=4 SV=1[more]
A0A0N7KFG67.0e-2272.37Os02g0550650 protein (Fragment) OS=Oryza sativa subsp. japonica OX=39947 GN=Os02... [more]
A0A0A9IXB35.0e-1253.85Uncharacterized protein OS=Arundo donax OX=35708 PE=4 SV=1[more]
A0A0A9GAM64.3e-1179.17Uncharacterized protein OS=Arundo donax OX=35708 PE=4 SV=1[more]
A0A0A9DBZ35.6e-1151.28Uncharacterized protein OS=Arundo donax OX=35708 PE=4 SV=1[more]
BLAST of Sgr015174 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sgr015174.1Sgr015174.1mRNA