|
|
Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGGCTAAGTTGAGATCATCAGCCTCATCCAAATTCTCTTTCATTTCCATCTTCATTTTGGTGTGTTCCTTGGCCTTCCTTTCAACTGCAGCCATTGCAGAGGCCAAAGAAAATGAAGTTGCAGTGGGGTTTCATCATCAAAATCAGTTCATGTGGGAAAGGAAGGAGAGACTGAATCATGGAAGCTTTAGAGGCCCTAAGAAACACCTTCTCCATCCTCACCAGTATGAGCCACTTCACTCTCAAAACCCTATTCTGTAA mRNA sequence ATGGCTAAGTTGAGATCATCAGCCTCATCCAAATTCTCTTTCATTTCCATCTTCATTTTGGTGTGTTCCTTGGCCTTCCTTTCAACTGCAGCCATTGCAGAGGCCAAAGAAAATGAAGTTGCAGTGGGGTTTCATCATCAAAATCAGTTCATGTGGGAAAGGAAGGAGAGACTGAATCATGGAAGCTTTAGAGGCCCTAAGAAACACCTTCTCCATCCTCACCAGTATGAGCCACTTCACTCTCAAAACCCTATTCTGTAA Coding sequence (CDS) ATGGCTAAGTTGAGATCATCAGCCTCATCCAAATTCTCTTTCATTTCCATCTTCATTTTGGTGTGTTCCTTGGCCTTCCTTTCAACTGCAGCCATTGCAGAGGCCAAAGAAAATGAAGTTGCAGTGGGGTTTCATCATCAAAATCAGTTCATGTGGGAAAGGAAGGAGAGACTGAATCATGGAAGCTTTAGAGGCCCTAAGAAACACCTTCTCCATCCTCACCAGTATGAGCCACTTCACTCTCAAAACCCTATTCTGTAA Protein sequence MAKLRSSASSKFSFISIFILVCSLAFLSTAAIAEAKENEVAVGFHHQNQFMWERKERLNHGSFRGPKKHLLHPHQYEPLHSQNPIL
Homology
BLAST of Sgr014806 vs. NCBI nr
Match: KGN60344.1 (hypothetical protein Csa_002159 [Cucumis sativus]) HSP 1 Score: 68.6 bits (166), Expect = 3.1e-08 Identity = 39/79 (49.37%), Postives = 52/79 (65.82%), Query Frame = 0
Query: 10 SKFSFISIFILVCSLAFLSTAAIAEAKENEVAVGFHHQNQFMWERKERLNHGSFRGPKKH 69
+KFSFI IFIL ++ A +K +VA FH+ ++F+W RKER+NHGSFRGP K+
Sbjct: 2 AKFSFILIFILAFISVTVAAAIGDMSKGKDVATKFHYHDEFIWGRKERINHGSFRGPDKY 61
Query: 70 LLH-PHQYEPLHS-QNPIL 87
LL+ PH + P Q PIL
Sbjct: 62 LLNDPHPFHPFDQFQGPIL 80
BLAST of Sgr014806 vs. ExPASy TrEMBL
Match: A0A0A0LH37 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G895900 PE=4 SV=1) HSP 1 Score: 68.6 bits (166), Expect = 1.5e-08 Identity = 39/79 (49.37%), Postives = 52/79 (65.82%), Query Frame = 0
Query: 10 SKFSFISIFILVCSLAFLSTAAIAEAKENEVAVGFHHQNQFMWERKERLNHGSFRGPKKH 69
+KFSFI IFIL ++ A +K +VA FH+ ++F+W RKER+NHGSFRGP K+
Sbjct: 2 AKFSFILIFILAFISVTVAAAIGDMSKGKDVATKFHYHDEFIWGRKERINHGSFRGPDKY 61
Query: 70 LLH-PHQYEPLHS-QNPIL 87
LL+ PH + P Q PIL
Sbjct: 62 LLNDPHPFHPFDQFQGPIL 80
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| KGN60344.1 | 3.1e-08 | 49.37 | hypothetical protein Csa_002159 [Cucumis sativus] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0LH37 | 1.5e-08 | 49.37 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G895900 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
Relationships
The following mRNA feature(s) are a part of this gene:
|
