Sgr014483 (gene) Monk fruit (Qingpiguo) v1

Overview


Name	Sgr014483
Type	gene
Organism	Siraitia grosvenorii (Monk fruit (Qingpiguo) v1)
Description	Unknown protein
Location	tig00000589: 760851 .. 761954 (-)
RNA-Seq Expression	Sgr014483
Synteny	Sgr014483

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACAATGGCCTCTCCTACCTTGACTACAGAAGAAGCTCCAAATGGGGGTTATAATTCTCCTGTGGAGCAAGCATCTAGATTGATATCTCGACTATATGTGAATGAATGGAACTTGAAAACACACAGACTTGGGTTTGAAAGGGAGAAGGCAAGAGCTTTTGGTAGCCATTTATAAATCCAAAGAAAAATTCAAAAAGAGTCTTTGAGATCATCATGACCCAACATATCAAACAGGTGGCAGGTGGAAGACATTGACAAGATTGATGACAACAAAGTTTCTTTGGTTACTTTGGCCATCAAGTGTTTGGGAAAAATTACTCTAAGGTCATCACCACCCACTTAACATATTTCTTCAATGGACAAGGATGTGCAACAAACTCCAGTCTAATTAGACAGGTAAGAGACAGATCATATTGCTATGGCAACTTGCAACAACAAAGTGGTAGAGAGGCACACTCACAAACAAGCACCATCATCATCTCAATCAAAACCCAAATCAGTACTTTTCAAGAAGATGCTGCAGTGCACAATAATCAAAGTTTGTAAAATGACATTTTTAAAAAAAAAAATCTGCACAGATCAGTGGAGGAATAGCATGTTGCAAGTACTGTCATCAGACTCATCACCAAAATGAATTAAGTTCAGCATGTTAGTCACATTATGAGTCCAATTATAATGATTAATTAATGTAAAACAAATATCAGATCCTTAACAAGAGAAGGCTCATCATTAAGCACTAACTACCTGATTTCAAAATCATCCTTTCATCAAAATCTGACCAATTATTTCTGACAATTCTGTTTTCTACCGACACACCGTTGATTTTTTTATGTTTTTTTTTTCTCTTCGACATTTCATCAAACACCTAGAGTGCTTCAGACGATTGACGAACAAATAAAGCAATTTGAAGGCTGTCGGAGGGGGTGGCAGGGCAGCCGCTTTATCGGCGTGCATCGAGGGCAAGCTCAAATGGCCTCCCCCTCCCCGACTCATGCTCGGAGATAAATTTAATCATGTGGCTAATAACATGCCTGGCCACGCTTTCCAATGGCCATCAGGCCGTCGCCCACATGCCCATGTATGCTTAAAGCTAGGCATCTGA

mRNA sequence

ATGACAATGGCCTCTCCTACCTTGACTACAGAAGAAGCTCCAAATGGGGGTTATAATTCTCCTGTGGAGCAAGCATCTAGATTGATATCTCGACTATATGTGAATGAATGGAACTTGAAAACACACAGACTTGGGTGGCAGGTGGAAGACATTGACAAGATTGATGACAACAAAGTTTCTTTGGTTACTTTGGCCATCAAGTGTTTGGGAAAAATTACTCTAAGGGCAGCCGCTTTATCGGCGTGCATCGAGGGCAAGCTCAAATGGCCTCCCCCTCCCCGACTCATGCTCGGAGATAAATTTAATCATGTGGCTAATAACATGCCTGGCCACGCTTTCCAATGGCCATCAGGCCGTCGCCCACATGCCCATGTATGCTTAAAGCTAGGCATCTGA

Coding sequence (CDS)

ATGACAATGGCCTCTCCTACCTTGACTACAGAAGAAGCTCCAAATGGGGGTTATAATTCTCCTGTGGAGCAAGCATCTAGATTGATATCTCGACTATATGTGAATGAATGGAACTTGAAAACACACAGACTTGGGTGGCAGGTGGAAGACATTGACAAGATTGATGACAACAAAGTTTCTTTGGTTACTTTGGCCATCAAGTGTTTGGGAAAAATTACTCTAAGGGCAGCCGCTTTATCGGCGTGCATCGAGGGCAAGCTCAAATGGCCTCCCCCTCCCCGACTCATGCTCGGAGATAAATTTAATCATGTGGCTAATAACATGCCTGGCCACGCTTTCCAATGGCCATCAGGCCGTCGCCCACATGCCCATGTATGCTTAAAGCTAGGCATCTGA

Protein sequence

MTMASPTLTTEEAPNGGYNSPVEQASRLISRLYVNEWNLKTHRLGWQVEDIDKIDDNKVSLVTLAIKCLGKITLRAAALSACIEGKLKWPPPPRLMLGDKFNHVANNMPGHAFQWPSGRRPHAHVCLKLGI

Homology

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BLAST of Sgr014483 vs. NCBI nr
Match: KAG6580483.1 (Auxin transporter-like protein 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 54.3 bits (129), Expect = 9.2e-04
Identity = 37/74 (50.00%), Postives = 42/74 (56.76%), Query Frame = 0


Query: 1  MTMASPTLTTEEAPNGGYNSPVEQASRLISRLYVNEWNLKTHRLGWQVEDIDKIDDNKVS 60
          MT+ SPTLTTEE PNGGYNS     S+ + R Y N          WQVED D +D  K  
Sbjct: 1  MTVPSPTLTTEEDPNGGYNS---LWSKHLDR-YPN--------YVWQVEDNDMMDGIKFL 60

Query: 61 LVTLAIKCLGKITL 75
            TLAI+C  KI L
Sbjct: 61 RFTLAIECFAKIHL 62

The following BLAST results are available for this feature:

BLAST of Sgr014483 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6580483.1	9.2e-04	50.00	Auxin transporter-like protein 2, partial [Cucurbita argyrosperma subsp. sororia...	[more]

BLAST of Sgr014483 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sgr014483 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sgr014483 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Monk fruit (Qingpiguo) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..20

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sgr014483.1	Sgr014483.1	mRNA