Sgr014395 (gene) Monk fruit (Qingpiguo) v1

Overview


Name	Sgr014395
Type	gene
Organism	Siraitia grosvenorii (Monk fruit (Qingpiguo) v1)
Description	thioredoxin-like protein 4B
Location	tig00000536: 367485 .. 369955 (-)
RNA-Seq Expression	Sgr014395
Synteny	Sgr014395

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGCTACCTTTTAAGGACCTTAACGAAGAAGAGAGAAGTGGATTCCATCATTAGGGACACCATTGATAAGGTCCTTATTCTCCGATTTGGTCGGTGTTCCGATTCAGTTTGTCTCCTCCTTGACGATATTGTATGTTGCCAAATCCCTACATTGTGTTTTCTTCTTCTAGGGTTGATATGTTATTTCAGAATTGATGATTTTGTTTGCTTTCTTTTCATTCTTTTTTAATGATTTAGCTTGCTAAGTCTGCACGGGAAGTTTCAAAGTTTGCTTCAATAGCATTGGTTGATATTGATTCAGAAGAAATACAGGTTTACATCAAGTACTTTGACATAACTCTTATACCGTCCACTGTTTTCTTCTTCAATGCCCATCATATGAAGATGGATTCAGGGTGAGTTTTATCCTGCAGGTCTTAATTTACTTCTGTTGAAATATGTCGAGTATGGATGTGTAGCATTGTGTATGGTCTGTCAGTGTGGTCTTAGCTACTTGATCTTGCACAGTAGAGCAGCTAATATTCTCGACTAGAAGCTGGTTGATCTTGTTTTGACTTTACTCAAGATCCCTTGGGAGTTTTAGCAAATTACTGCCGTCGAAATGAGAAGCAAAAACTATTTATTTTTATTGGAAAAATCAACAACTGGTTATCTTTTGGAAGGATGAGGATGTGTCAGCCTCTCAGTAATATATATTCTCTCTTATTGTTAATGGAAGTATTTGTTTCTTATTGGATAAAAACTGAATCCCTAAGAGTCTATTGTAGAACATGCTGAACCTGTTGTTAGTTTGTTAAGTTTAATTGTTCCCATATCAATACTTCATCTTTATGGTTAAGACAATTCAGAGTAATTTAAAAGCTATAATGTGGTAAAGTATAAGATAGAATGTTTTGTTTGAGCTGTTGTTAATATTTTAATTATTTCTACTTTTTTTGTTATAGTAGTTTTCCTCTGAAGTTTTTAGATTTAATTTTTCACTTACGTAAGAAAAATAAATTCATGAAACAAAAATTGGAAACTAGTGCGACGAGGGTCAGCTTAGTAGCTAAAGGAGCAAGGTATAAGCCTAAATGTGCTGAAAATTATGAGTTCCTCTCATGGTGACCATCTACTTAGGATATAAAATATCATACGAGTATCTTGACAACAAATGTTTGTTGGATCCGAAAGTTATTCCGCGAGATTAGTTGAGGTGTGAATGAGCCAAACATTCAAGATTATAAAAAAATAAAGAATAAAACTAAAAAATGGCAAACTAAATTTTTGAACAACAATAAATTTGGACAAGTTTTCAATTGTTGGTCTATTGAAAGAGTGGATAAAGAGACTCGTGAGACTCAAGGAGGTGGTTTATTATCTTTTTTCATGCAAATCCCTCTTTGCAGATCTCAAAGTTCATTATGAGCCCATTTTTAAGGTGCTTTGTAAATGTCATTTGGGGAGATAATGTCCTGGAAATCAATATTTTTATTTGGTCTTTGCTTTTATGTGGGCTGAAGACAAGCTTCGAATAAGTAATTTGCAATTTTCTCTTTCTCCTGTGTTGCACCTAGGTAAGAAGCAAGGAGAATATGTAAATGACCTCTTTATTTTATGCTCTTATTCCATCAGGTTCTGGTACCAGGTCGATATATTCACTTAGCTCTTCCTGTGGCTCACCCCTATAAAGCTCGAATCCTGTGGATTAATATTATTCTTGCTCTTTTGTGGGAGTTGTGATTAGAAAAATCAATGAGTTATCCGAGAGGAAGATAGATCTTTTAGTTTTCAGGATGTTACTATCTTAATTCTCTTGTTTACTTTTGACCAATTAGAGAGTTCTTCTTTTGTTAATCTTTTTGGTTTAGGGATATCTAATTATGCCTCTTATGTATTCTCCCTTTTTGATGATGAAAGGGTATGTTTATCAAAACAACTGAAAAGTTGTAGGACAAAGTGTTTAAATAAGGAGAGAAATGAGAGGAAACATTGTAGAGGGAGGAGTAGTAATCAGAGAAGGTATAAAAGAAAGCTTTACAAACACTTGGGGAGGTCTTTCCCCTGAACTAGATACGGGTTAGGGGAGGTACCCTAGTGCTTATAACCCCATCTGACCTGAAACTCAATGTGACATGCAATCCAAATTCATTTAGAATTGAAATTCTGTGATTGGACAGGAAGAGGTTTTGTGGATCCCTAGCTCTGCTAGTTAGTACTTTAGCCATTCCCACGTCACCTCCTATATGTAAAAGAAAAGGCAATATTTATATGGTGCCTGCTCTGATAAATAATGCAAGCTAACAAGCTGTTCCTCATATAATATTTTAAATTAAGTCTAGTAAATTGTTTTGTCATTATCTCTTTTTCTTTTTTTCTTTTTTTTTGACATGCAGGACTGCAGATCATACAAAGTGGATTGGTGCTTTTCACCAAAAGCAGGATTTTATTGATGTTGTGGAGGTAGTGGCCACTGGTTTTAGAATATAA

mRNA sequence

ATGAGCTACCTTTTAAGGACCTTAACGAAGAAGAGAGAAGTGGATTCCATCATTAGGGACACCATTGATAAGGTCCTTATTCTCCGATTTGGTCGGTGTTCCGATTCAGTTTGTCTCCTCCTTGACGATATTCTTGCTAAGTCTGCACGGGAAGTTTCAAAGTTTGCTTCAATAGCATTGGTTGATATTGATTCAGAAGAAATACAGGTTTACATCAAGTACTTTGACATAACTCTTATACCGTCCACTGTTTTCTTCTTCAATGCCCATCATATGAAGATGGATTCAGGGACTGCAGATCATACAAAGTGGATTGGTGCTTTTCACCAAAAGCAGGATTTTATTGATGTTGTGGAGGTAGTGGCCACTGGTTTTAGAATATAA

Coding sequence (CDS)

ATGAGCTACCTTTTAAGGACCTTAACGAAGAAGAGAGAAGTGGATTCCATCATTAGGGACACCATTGATAAGGTCCTTATTCTCCGATTTGGTCGGTGTTCCGATTCAGTTTGTCTCCTCCTTGACGATATTCTTGCTAAGTCTGCACGGGAAGTTTCAAAGTTTGCTTCAATAGCATTGGTTGATATTGATTCAGAAGAAATACAGGTTTACATCAAGTACTTTGACATAACTCTTATACCGTCCACTGTTTTCTTCTTCAATGCCCATCATATGAAGATGGATTCAGGGACTGCAGATCATACAAAGTGGATTGGTGCTTTTCACCAAAAGCAGGATTTTATTGATGTTGTGGAGGTAGTGGCCACTGGTTTTAGAATATAA

Protein sequence

MSYLLRTLTKKREVDSIIRDTIDKVLILRFGRCSDSVCLLLDDILAKSAREVSKFASIALVDIDSEEIQVYIKYFDITLIPSTVFFFNAHHMKMDSGTADHTKWIGAFHQKQDFIDVVEVVATGFRI

Homology

[Close]

BLAST of Sgr014395 vs. NCBI nr
Match: XP_022152114.1 (thioredoxin-like protein 4B [Momordica charantia] >XP_022152121.1 thioredoxin-like protein 4B [Momordica charantia])

HSP 1 Score: 233.0 bits (593), Expect = 1.4e-57
Identity = 118/124 (95.16%), Postives = 120/124 (96.77%), Query Frame = 0


Query: 1   MSYLLRTLTKKREVDSIIRDTIDKVLILRFGRCSDSVCLLLDDILAKSAREVSKFASIAL 60
           MSYLLRTLTKKREVDSIIRDTIDKVLILRFGRCSDSVCLLLDDILAK AREVSKFASIAL
Sbjct: 1   MSYLLRTLTKKREVDSIIRDTIDKVLILRFGRCSDSVCLLLDDILAKCAREVSKFASIAL 60

Query: 61  VDIDSEEIQVYIKYFDITLIPSTVFFFNAHHMKMDSGTADHTKWIGAFHQKQDFIDVVEV 120
           VDIDSEEIQVYIKYFDI+LIPSTVFFFNAHHMKMDSGTADHTKWIGAFHQKQDFIDVVE 
Sbjct: 61  VDIDSEEIQVYIKYFDISLIPSTVFFFNAHHMKMDSGTADHTKWIGAFHQKQDFIDVVEA 120

Query: 121 VATG 125
           +  G
Sbjct: 121 IFRG 124

[Close]

BLAST of Sgr014395 vs. NCBI nr
Match: KAG6575968.1 (Thioredoxin-like protein 4B, partial [Cucurbita argyrosperma subsp. sororia] >KAG7014491.1 Thioredoxin-like protein 4B [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 231.1 bits (588), Expect = 5.3e-57
Identity = 117/124 (94.35%), Postives = 119/124 (95.97%), Query Frame = 0


Query: 1   MSYLLRTLTKKREVDSIIRDTIDKVLILRFGRCSDSVCLLLDDILAKSAREVSKFASIAL 60
           MSYLLRTLT KREVDSIIRDTIDKVLILRFGRCSDSVCLLLDDILAK AREVSKFASIAL
Sbjct: 1   MSYLLRTLTTKREVDSIIRDTIDKVLILRFGRCSDSVCLLLDDILAKCAREVSKFASIAL 60

Query: 61  VDIDSEEIQVYIKYFDITLIPSTVFFFNAHHMKMDSGTADHTKWIGAFHQKQDFIDVVEV 120
           VDIDSEEIQVYIKYFDITLIPSTVFFFNAHHMKMDSGTADHTKWIGAFH+KQDFIDVVE 
Sbjct: 61  VDIDSEEIQVYIKYFDITLIPSTVFFFNAHHMKMDSGTADHTKWIGAFHEKQDFIDVVEA 120

Query: 121 VATG 125
           +  G
Sbjct: 121 IFRG 124

[Close]

BLAST of Sgr014395 vs. NCBI nr
Match: XP_022953679.1 (thioredoxin-like protein 4B [Cucurbita moschata] >XP_022953680.1 thioredoxin-like protein 4B [Cucurbita moschata])

HSP 1 Score: 231.1 bits (588), Expect = 5.3e-57
Identity = 117/124 (94.35%), Postives = 119/124 (95.97%), Query Frame = 0


Query: 1   MSYLLRTLTKKREVDSIIRDTIDKVLILRFGRCSDSVCLLLDDILAKSAREVSKFASIAL 60
           MSYLLRTLT KREVDSIIRDTIDKVLILRFGRCSDSVCLLLDDILAK AREVSKFASIAL
Sbjct: 1   MSYLLRTLTTKREVDSIIRDTIDKVLILRFGRCSDSVCLLLDDILAKCAREVSKFASIAL 60

Query: 61  VDIDSEEIQVYIKYFDITLIPSTVFFFNAHHMKMDSGTADHTKWIGAFHQKQDFIDVVEV 120
           VDIDSEEIQVYIKYFDITLIPSTVFFFNAHHMKMDSGTADHTKWIGAFH+KQDFIDVVE 
Sbjct: 61  VDIDSEEIQVYIKYFDITLIPSTVFFFNAHHMKMDSGTADHTKWIGAFHEKQDFIDVVEA 120

Query: 121 VATG 125
           +  G
Sbjct: 121 IFRG 124

[Close]

BLAST of Sgr014395 vs. NCBI nr
Match: XP_022991475.1 (thioredoxin-like protein 4B [Cucurbita maxima] >XP_022991476.1 thioredoxin-like protein 4B [Cucurbita maxima])

HSP 1 Score: 230.3 bits (586), Expect = 9.1e-57
Identity = 116/124 (93.55%), Postives = 119/124 (95.97%), Query Frame = 0


Query: 1   MSYLLRTLTKKREVDSIIRDTIDKVLILRFGRCSDSVCLLLDDILAKSAREVSKFASIAL 60
           MSYLLRTLT KREVDSIIRDTIDKVLILRFGRCSDSVCLLLDDILAK AREVSKFASIAL
Sbjct: 1   MSYLLRTLTTKREVDSIIRDTIDKVLILRFGRCSDSVCLLLDDILAKCAREVSKFASIAL 60

Query: 61  VDIDSEEIQVYIKYFDITLIPSTVFFFNAHHMKMDSGTADHTKWIGAFHQKQDFIDVVEV 120
           VDIDSEE+QVYIKYFDITLIPSTVFFFNAHHMKMDSGTADHTKWIGAFH+KQDFIDVVE 
Sbjct: 61  VDIDSEELQVYIKYFDITLIPSTVFFFNAHHMKMDSGTADHTKWIGAFHEKQDFIDVVEA 120

Query: 121 VATG 125
           +  G
Sbjct: 121 IFRG 124

[Close]

BLAST of Sgr014395 vs. NCBI nr
Match: XP_004139666.1 (thioredoxin-like protein 4B [Cucumis sativus] >XP_011659173.1 thioredoxin-like protein 4B [Cucumis sativus] >XP_031745245.1 thioredoxin-like protein 4B [Cucumis sativus] >XP_031745246.1 thioredoxin-like protein 4B [Cucumis sativus] >KGN44925.2 hypothetical protein Csa_015728 [Cucumis sativus])

HSP 1 Score: 229.9 bits (585), Expect = 1.2e-56
Identity = 114/124 (91.94%), Postives = 119/124 (95.97%), Query Frame = 0


Query: 1   MSYLLRTLTKKREVDSIIRDTIDKVLILRFGRCSDSVCLLLDDILAKSAREVSKFASIAL 60
           MSYLLRTLTKK EVDS+IRDTIDKVLILRFGRCSDSVCLLLDDILAK AREVSKFAS+AL
Sbjct: 1   MSYLLRTLTKKGEVDSLIRDTIDKVLILRFGRCSDSVCLLLDDILAKCAREVSKFASVAL 60

Query: 61  VDIDSEEIQVYIKYFDITLIPSTVFFFNAHHMKMDSGTADHTKWIGAFHQKQDFIDVVEV 120
           VDIDSEEIQVY+KYFDITLIPSTVFFFNAHHMKMDSGTADHTKW+GAFHQKQDFIDVVE 
Sbjct: 61  VDIDSEEIQVYVKYFDITLIPSTVFFFNAHHMKMDSGTADHTKWVGAFHQKQDFIDVVEA 120

Query: 121 VATG 125
           +  G
Sbjct: 121 IFRG 124

[Close]

BLAST of Sgr014395 vs. ExPASy Swiss-Prot
Match: Q9NX01 (Thioredoxin-like protein 4B OS=Homo sapiens OX=9606 GN=TXNL4B PE=1 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 1.3e-34
Identity = 73/124 (58.87%), Postives = 96/124 (77.42%), Query Frame = 0


Query: 1   MSYLLRTLTKKREVDSIIRDTIDKVLILRFGRCSDSVCLLLDDILAKSAREVSKFASIAL 60
           MS+LL  LT K+EVD  I+ T +KVL+LRFGR  D VCL LDDIL+K++ ++SK A+I L
Sbjct: 1   MSFLLPKLTSKKEVDQAIKSTAEKVLVLRFGRDEDPVCLQLDDILSKTSSDLSKMAAIYL 60

Query: 61  VDIDSEEIQVYIKYFDITLIPSTVFFFNAHHMKMDSGTADHTKWIGAFHQKQDFIDVVEV 120
           VD+D  +  VY +YFDI+ IPSTVFFFN  HMK+D G+ DHTK++G+F  KQDFID++EV
Sbjct: 61  VDVD--QTAVYTQYFDISYIPSTVFFFNGQHMKVDYGSPDHTKFVGSFKTKQDFIDLIEV 120

Query: 121 VATG 125
           +  G
Sbjct: 121 IYRG 122

[Close]

BLAST of Sgr014395 vs. ExPASy Swiss-Prot
Match: Q8BUH1 (Thioredoxin-like protein 4B OS=Mus musculus OX=10090 GN=Txnl4b PE=2 SV=2)

HSP 1 Score: 146.4 bits (368), Expect = 2.3e-34
Identity = 73/124 (58.87%), Postives = 95/124 (76.61%), Query Frame = 0


Query: 1   MSYLLRTLTKKREVDSIIRDTIDKVLILRFGRCSDSVCLLLDDILAKSAREVSKFASIAL 60
           MS+LL  LT K+EVD  I+ T +KVL+LRFGR  D VCL LDDIL+K++ ++SK A+I L
Sbjct: 1   MSFLLPKLTSKKEVDQAIKSTAEKVLVLRFGRDEDPVCLQLDDILSKTSADLSKMAAIYL 60

Query: 61  VDIDSEEIQVYIKYFDITLIPSTVFFFNAHHMKMDSGTADHTKWIGAFHQKQDFIDVVEV 120
           VD+D     VY +YFDI+ IPSTVFFFN  HMK+D G+ DHTK++G+F  KQDFID++EV
Sbjct: 61  VDVD--HTPVYTQYFDISYIPSTVFFFNGQHMKVDYGSPDHTKFVGSFKTKQDFIDLIEV 120

Query: 121 VATG 125
           +  G
Sbjct: 121 IYRG 122

[Close]

BLAST of Sgr014395 vs. ExPASy Swiss-Prot
Match: P83876 (Thioredoxin-like protein 4A OS=Homo sapiens OX=9606 GN=TXNL4A PE=1 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 4.9e-13
Identity = 44/126 (34.92%), Postives = 70/126 (55.56%), Query Frame = 0


Query: 1   MSYLLRTLTKKREVDSIIRDTIDKVLILRFGRCSDSVCLLLDDILAKSAREVSKFASIAL 60
           MSY+L  L    +VD  I    D+V+++RFG   D  C+ +D++L   A +V  FA I L
Sbjct: 1   MSYMLPHLHNGWQVDQAILSEEDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYL 60

Query: 61  VDIDSEEIQVYIKYFDITLIPSTVFFFNAHHMKMDSGTADHTKWIGAFHQKQDFIDVVEV 120
           VDI   E+  + K +++    + +FFF   H+ +D GT ++ K   A   KQ+ +D++E 
Sbjct: 61  VDI--TEVPDFNKMYELYDPCTVMFFFRNKHIMIDLGTGNNNKINWAMEDKQEMVDIIET 120

Query: 121 VATGFR 127
           V  G R
Sbjct: 121 VYRGAR 124

[Close]

BLAST of Sgr014395 vs. ExPASy Swiss-Prot
Match: P83877 (Thioredoxin-like protein 4A OS=Mus musculus OX=10090 GN=Txnl4a PE=1 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 4.9e-13
Identity = 44/126 (34.92%), Postives = 70/126 (55.56%), Query Frame = 0


Query: 1   MSYLLRTLTKKREVDSIIRDTIDKVLILRFGRCSDSVCLLLDDILAKSAREVSKFASIAL 60
           MSY+L  L    +VD  I    D+V+++RFG   D  C+ +D++L   A +V  FA I L
Sbjct: 1   MSYMLPHLHNGWQVDQAILSEEDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYL 60

Query: 61  VDIDSEEIQVYIKYFDITLIPSTVFFFNAHHMKMDSGTADHTKWIGAFHQKQDFIDVVEV 120
           VDI   E+  + K +++    + +FFF   H+ +D GT ++ K   A   KQ+ +D++E 
Sbjct: 61  VDI--TEVPDFNKMYELYDPCTVMFFFRNKHIMIDLGTGNNNKINWAMEDKQEMVDIIET 120

Query: 121 VATGFR 127
           V  G R
Sbjct: 121 VYRGAR 124

[Close]

BLAST of Sgr014395 vs. ExPASy Swiss-Prot
Match: Q9FE62 (Thioredoxin-like protein YLS8 OS=Arabidopsis thaliana OX=3702 GN=YLS8 PE=1 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 8.4e-13
Identity = 48/128 (37.50%), Postives = 70/128 (54.69%), Query Frame = 0


Query: 1   MSYLLRTLTKKREVDSIIRDTIDKVLILRFGRCSDSVCLLLDDILAKSAREVSKFASIAL 60
           MSYLL  L     VD  I    ++++++RFG   D  C+ +D++LA  A  +  FA I L
Sbjct: 1   MSYLLPHLHSGWAVDQSILAEEERLVVIRFGHDWDETCMQMDEVLASVAETIKNFAVIYL 60

Query: 61  VDI-DSEEIQVYIKYFDITLIPSTV-FFFNAHHMKMDSGTADHTKWIGAFHQKQDFIDVV 120
           VDI +  +     + +D    PSTV FFF   H+ +D GT ++ K   A   KQ+FID++
Sbjct: 61  VDITEVPDFNTMYELYD----PSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFIDII 120

Query: 121 EVVATGFR 127
           E V  G R
Sbjct: 121 ETVYRGAR 124

[Close]

BLAST of Sgr014395 vs. ExPASy TrEMBL
Match: A0A6J1DGN8 (thioredoxin-like protein 4B OS=Momordica charantia OX=3673 GN=LOC111019903 PE=3 SV=1)

HSP 1 Score: 233.0 bits (593), Expect = 6.8e-58
Identity = 118/124 (95.16%), Postives = 120/124 (96.77%), Query Frame = 0


Query: 1   MSYLLRTLTKKREVDSIIRDTIDKVLILRFGRCSDSVCLLLDDILAKSAREVSKFASIAL 60
           MSYLLRTLTKKREVDSIIRDTIDKVLILRFGRCSDSVCLLLDDILAK AREVSKFASIAL
Sbjct: 1   MSYLLRTLTKKREVDSIIRDTIDKVLILRFGRCSDSVCLLLDDILAKCAREVSKFASIAL 60

Query: 61  VDIDSEEIQVYIKYFDITLIPSTVFFFNAHHMKMDSGTADHTKWIGAFHQKQDFIDVVEV 120
           VDIDSEEIQVYIKYFDI+LIPSTVFFFNAHHMKMDSGTADHTKWIGAFHQKQDFIDVVE 
Sbjct: 61  VDIDSEEIQVYIKYFDISLIPSTVFFFNAHHMKMDSGTADHTKWIGAFHQKQDFIDVVEA 120

Query: 121 VATG 125
           +  G
Sbjct: 121 IFRG 124

[Close]

BLAST of Sgr014395 vs. ExPASy TrEMBL
Match: A0A6J1GQC5 (thioredoxin-like protein 4B OS=Cucurbita moschata OX=3662 GN=LOC111456136 PE=3 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 2.6e-57
Identity = 117/124 (94.35%), Postives = 119/124 (95.97%), Query Frame = 0


Query: 1   MSYLLRTLTKKREVDSIIRDTIDKVLILRFGRCSDSVCLLLDDILAKSAREVSKFASIAL 60
           MSYLLRTLT KREVDSIIRDTIDKVLILRFGRCSDSVCLLLDDILAK AREVSKFASIAL
Sbjct: 1   MSYLLRTLTTKREVDSIIRDTIDKVLILRFGRCSDSVCLLLDDILAKCAREVSKFASIAL 60

Query: 61  VDIDSEEIQVYIKYFDITLIPSTVFFFNAHHMKMDSGTADHTKWIGAFHQKQDFIDVVEV 120
           VDIDSEEIQVYIKYFDITLIPSTVFFFNAHHMKMDSGTADHTKWIGAFH+KQDFIDVVE 
Sbjct: 61  VDIDSEEIQVYIKYFDITLIPSTVFFFNAHHMKMDSGTADHTKWIGAFHEKQDFIDVVEA 120

Query: 121 VATG 125
           +  G
Sbjct: 121 IFRG 124

[Close]

BLAST of Sgr014395 vs. ExPASy TrEMBL
Match: A0A6J1JT18 (thioredoxin-like protein 4B OS=Cucurbita maxima OX=3661 GN=LOC111488081 PE=3 SV=1)

HSP 1 Score: 230.3 bits (586), Expect = 4.4e-57
Identity = 116/124 (93.55%), Postives = 119/124 (95.97%), Query Frame = 0


Query: 1   MSYLLRTLTKKREVDSIIRDTIDKVLILRFGRCSDSVCLLLDDILAKSAREVSKFASIAL 60
           MSYLLRTLT KREVDSIIRDTIDKVLILRFGRCSDSVCLLLDDILAK AREVSKFASIAL
Sbjct: 1   MSYLLRTLTTKREVDSIIRDTIDKVLILRFGRCSDSVCLLLDDILAKCAREVSKFASIAL 60

Query: 61  VDIDSEEIQVYIKYFDITLIPSTVFFFNAHHMKMDSGTADHTKWIGAFHQKQDFIDVVEV 120
           VDIDSEE+QVYIKYFDITLIPSTVFFFNAHHMKMDSGTADHTKWIGAFH+KQDFIDVVE 
Sbjct: 61  VDIDSEELQVYIKYFDITLIPSTVFFFNAHHMKMDSGTADHTKWIGAFHEKQDFIDVVEA 120

Query: 121 VATG 125
           +  G
Sbjct: 121 IFRG 124

[Close]

BLAST of Sgr014395 vs. ExPASy TrEMBL
Match: A0A1S3BH38 (thioredoxin-like protein 4B OS=Cucumis melo OX=3656 GN=LOC103489754 PE=3 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 3.7e-56
Identity = 113/124 (91.13%), Postives = 119/124 (95.97%), Query Frame = 0


Query: 1   MSYLLRTLTKKREVDSIIRDTIDKVLILRFGRCSDSVCLLLDDILAKSAREVSKFASIAL 60
           MSYLLRTLTKK EVDS+IRDTIDKVLILRFGRCSDSVCLLLDDILAK AREVSKFASIAL
Sbjct: 1   MSYLLRTLTKKGEVDSLIRDTIDKVLILRFGRCSDSVCLLLDDILAKCAREVSKFASIAL 60

Query: 61  VDIDSEEIQVYIKYFDITLIPSTVFFFNAHHMKMDSGTADHTKWIGAFHQKQDFIDVVEV 120
           VDIDSEE+QVY+KYFDITLIPSTVFFFNAHHMKMDSGTADHTKW+GAFHQKQ+FIDVVE 
Sbjct: 61  VDIDSEEMQVYVKYFDITLIPSTVFFFNAHHMKMDSGTADHTKWVGAFHQKQNFIDVVEA 120

Query: 121 VATG 125
           +  G
Sbjct: 121 IFRG 124

[Close]

BLAST of Sgr014395 vs. ExPASy TrEMBL
Match: A0A6P4ATD0 (thioredoxin-like protein 4B OS=Ziziphus jujuba OX=326968 GN=LOC107426724 PE=3 SV=1)

HSP 1 Score: 222.2 bits (565), Expect = 1.2e-54
Identity = 107/124 (86.29%), Postives = 118/124 (95.16%), Query Frame = 0


Query: 1   MSYLLRTLTKKREVDSIIRDTIDKVLILRFGRCSDSVCLLLDDILAKSAREVSKFASIAL 60
           MSYLL TLTKKREVDSII+DTIDKVL+LRFGR SDSVCLLLDD+L+KSAREVSKFA+IAL
Sbjct: 1   MSYLLNTLTKKREVDSIIKDTIDKVLVLRFGRASDSVCLLLDDVLSKSAREVSKFATIAL 60

Query: 61  VDIDSEEIQVYIKYFDITLIPSTVFFFNAHHMKMDSGTADHTKWIGAFHQKQDFIDVVEV 120
           VDIDSE++QVY+ YFDITLIPST+FFFNAHHMKMDSGTADHTKW+GAFHQKQDFIDVVE 
Sbjct: 61  VDIDSEDVQVYVNYFDITLIPSTIFFFNAHHMKMDSGTADHTKWVGAFHQKQDFIDVVEA 120

Query: 121 VATG 125
           +  G
Sbjct: 121 IFRG 124

[Close]

BLAST of Sgr014395 vs. TAIR 10
Match: AT3G24730.1 (mRNA splicing factor, thioredoxin-like U5 snRNP )

HSP 1 Score: 201.4 bits (511), Expect = 4.2e-52
Identity = 94/124 (75.81%), Postives = 111/124 (89.52%), Query Frame = 0


Query: 1   MSYLLRTLTKKREVDSIIRDTIDKVLILRFGRCSDSVCLLLDDILAKSAREVSKFASIAL 60
           MSYLL+TLT K E+D +IRDTID+VL+LRFGR SD+VCL  D+ILAKS R+VSKFA +AL
Sbjct: 9   MSYLLKTLTTKEEIDRVIRDTIDEVLVLRFGRSSDAVCLQHDEILAKSVRDVSKFAKVAL 68

Query: 61  VDIDSEEIQVYIKYFDITLIPSTVFFFNAHHMKMDSGTADHTKWIGAFHQKQDFIDVVEV 120
           VD+DSE++QVY+KYFDITL PST+FFFNAHHMK+DSGTADHTKW+GAFH KQDFIDVVE 
Sbjct: 69  VDVDSEDVQVYVKYFDITLFPSTIFFFNAHHMKLDSGTADHTKWVGAFHIKQDFIDVVEA 128

Query: 121 VATG 125
           +  G
Sbjct: 129 IYRG 132

[Close]

BLAST of Sgr014395 vs. TAIR 10
Match: AT5G08290.1 (mRNA splicing factor, thioredoxin-like U5 snRNP )

HSP 1 Score: 74.7 bits (182), Expect = 5.9e-14
Identity = 48/128 (37.50%), Postives = 70/128 (54.69%), Query Frame = 0


Query: 1   MSYLLRTLTKKREVDSIIRDTIDKVLILRFGRCSDSVCLLLDDILAKSAREVSKFASIAL 60
           MSYLL  L     VD  I    ++++++RFG   D  C+ +D++LA  A  +  FA I L
Sbjct: 1   MSYLLPHLHSGWAVDQSILAEEERLVVIRFGHDWDETCMQMDEVLASVAETIKNFAVIYL 60

Query: 61  VDI-DSEEIQVYIKYFDITLIPSTV-FFFNAHHMKMDSGTADHTKWIGAFHQKQDFIDVV 120
           VDI +  +     + +D    PSTV FFF   H+ +D GT ++ K   A   KQ+FID++
Sbjct: 61  VDITEVPDFNTMYELYD----PSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFIDII 120

Query: 121 EVVATGFR 127
           E V  G R
Sbjct: 121 ETVYRGAR 124

The following BLAST results are available for this feature:

BLAST of Sgr014395 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022152114.1	1.4e-57	95.16	thioredoxin-like protein 4B [Momordica charantia] >XP_022152121.1 thioredoxin-li...	[more]
KAG6575968.1	5.3e-57	94.35	Thioredoxin-like protein 4B, partial [Cucurbita argyrosperma subsp. sororia] >KA...	[more]
XP_022953679.1	5.3e-57	94.35	thioredoxin-like protein 4B [Cucurbita moschata] >XP_022953680.1 thioredoxin-lik...	[more]
XP_022991475.1	9.1e-57	93.55	thioredoxin-like protein 4B [Cucurbita maxima] >XP_022991476.1 thioredoxin-like ...	[more]
XP_004139666.1	1.2e-56	91.94	thioredoxin-like protein 4B [Cucumis sativus] >XP_011659173.1 thioredoxin-like p...	[more]

BLAST of Sgr014395 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9NX01	1.3e-34	58.87	Thioredoxin-like protein 4B OS=Homo sapiens OX=9606 GN=TXNL4B PE=1 SV=1	[more]
Q8BUH1	2.3e-34	58.87	Thioredoxin-like protein 4B OS=Mus musculus OX=10090 GN=Txnl4b PE=2 SV=2	[more]
P83876	4.9e-13	34.92	Thioredoxin-like protein 4A OS=Homo sapiens OX=9606 GN=TXNL4A PE=1 SV=1	[more]
P83877	4.9e-13	34.92	Thioredoxin-like protein 4A OS=Mus musculus OX=10090 GN=Txnl4a PE=1 SV=1	[more]
Q9FE62	8.4e-13	37.50	Thioredoxin-like protein YLS8 OS=Arabidopsis thaliana OX=3702 GN=YLS8 PE=1 SV=1	[more]

BLAST of Sgr014395 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DGN8	6.8e-58	95.16	thioredoxin-like protein 4B OS=Momordica charantia OX=3673 GN=LOC111019903 PE=3 ...	[more]
A0A6J1GQC5	2.6e-57	94.35	thioredoxin-like protein 4B OS=Cucurbita moschata OX=3662 GN=LOC111456136 PE=3 S...	[more]
A0A6J1JT18	4.4e-57	93.55	thioredoxin-like protein 4B OS=Cucurbita maxima OX=3661 GN=LOC111488081 PE=3 SV=...	[more]
A0A1S3BH38	3.7e-56	91.13	thioredoxin-like protein 4B OS=Cucumis melo OX=3656 GN=LOC103489754 PE=3 SV=1	[more]
A0A6P4ATD0	1.2e-54	86.29	thioredoxin-like protein 4B OS=Ziziphus jujuba OX=326968 GN=LOC107426724 PE=3 SV...	[more]

BLAST of Sgr014395 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G24730.1	4.2e-52	75.81	mRNA splicing factor, thioredoxin-like U5 snRNP	[more]
AT5G08290.1	5.9e-14	37.50	mRNA splicing factor, thioredoxin-like U5 snRNP	[more]

InterPro

Analysis Name: InterPro Annotations of Monk fruit (Qingpiguo) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004123	Dim1 family	SMART	SM01410	DIM1_2	coord: 4..127 e-value: 7.4E-57 score: 204.9
IPR004123	Dim1 family	PFAM	PF02966	DIM1	coord: 4..124 e-value: 3.6E-40 score: 136.8
IPR004123	Dim1 family	PANTHER	PTHR12052	THIOREDOXIN-LIKE PROTEN 4A, 4B	coord: 1..124
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 1..126 e-value: 1.2E-41 score: 143.6
None	No IPR available	PANTHER	PTHR12052:SF4	THIOREDOXIN-LIKE PROTEIN 4B	coord: 1..124
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 7..125

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sgr014395.1	Sgr014395.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000398	mRNA splicing, via spliceosome
cellular_component	GO:0005681	spliceosomal complex
cellular_component	GO:0046540	U4/U6 x U5 tri-snRNP complex
cellular_component	GO:0005682	U5 snRNP