Homology
BLAST of Sgr012884 vs. NCBI nr
Match:
XP_022157865.1 (pentatricopeptide repeat-containing protein At3g54980, mitochondrial-like [Momordica charantia] >XP_022157866.1 pentatricopeptide repeat-containing protein At3g54980, mitochondrial-like [Momordica charantia] >XP_022157867.1 pentatricopeptide repeat-containing protein At3g54980, mitochondrial-like [Momordica charantia] >XP_022157868.1 pentatricopeptide repeat-containing protein At3g54980, mitochondrial-like [Momordica charantia])
HSP 1 Score: 594.7 bits (1532), Expect = 5.1e-166
Identity = 300/357 (84.03%), Postives = 313/357 (87.68%), Query Frame = 0
Query: 1 MIVKGISPNVVSYNNMILGHCRKGNINAACKVYKEMLDNGFARN---------------- 60
MIVKGISPN VSYNNMILGHC+ GNINAACKVYKEMLDN F N
Sbjct: 476 MIVKGISPNAVSYNNMILGHCKNGNINAACKVYKEMLDNCFTPNVVTFSILMDGYFKKGD 535
Query: 61 ----------MMDANILPTDITLGTIIKGLCKAGRTSEGRDMFNKFVSQGFVPTCMAYKT 120
MMDANILPTDITLG IIKGLCK GRTSEGRDMFNKFVSQG VP+CMAY T
Sbjct: 536 IENAFGIFHMMMDANILPTDITLGIIIKGLCKGGRTSEGRDMFNKFVSQGLVPSCMAYNT 595
Query: 121 IIDGFIKEGDINLALIVYTEMCEIGISPSIVTYTSLIDGFCKSNNIDLALKLRNMMKRKG 180
IIDGFIKEGDINLAL VY EMCEIGISPSIVTYTSLIDGFCKSNNIDLALKL N+M+RKG
Sbjct: 596 IIDGFIKEGDINLALNVYREMCEIGISPSIVTYTSLIDGFCKSNNIDLALKLLNVMRRKG 655
Query: 181 LEMDITAYGTLIDSFCKRRDMRNARELFNELLGAGLSPNVIIYNSMIARFKNLNNMEAAI 240
LEMDITAYG LIDSFCKRRDMRNA ELFNELLG GLSPNVIIYNSMIA FKNLNNMEAAI
Sbjct: 656 LEMDITAYGMLIDSFCKRRDMRNASELFNELLGVGLSPNVIIYNSMIAGFKNLNNMEAAI 715
Query: 241 DLHKNMVNEGIPCDLQTYTSLIDGLLKEGRLLYASDLYSEMLSKGILPDDHTHTVLITGL 300
DL+K MV+EGIPCDLQTYTSLIDGLLKEG+LL+ASDLYSEMLS+GILPDDHTHTVLI+GL
Sbjct: 716 DLYKAMVDEGIPCDLQTYTSLIDGLLKEGKLLHASDLYSEMLSQGILPDDHTHTVLISGL 775
Query: 301 CNEGQLDNARKILEEMNGRNMTPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLARGLV 332
CN+GQL+NARKILEEMNGRN+ PSVLIYNTLIAGHFKEGNLQEAFRLHDEMLARGLV
Sbjct: 776 CNKGQLENARKILEEMNGRNVIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLARGLV 832
BLAST of Sgr012884 vs. NCBI nr
Match:
XP_022155459.1 (pentatricopeptide repeat-containing protein At3g54980, mitochondrial isoform X1 [Momordica charantia] >XP_022155460.1 pentatricopeptide repeat-containing protein At3g54980, mitochondrial isoform X1 [Momordica charantia] >XP_022155461.1 pentatricopeptide repeat-containing protein At3g54980, mitochondrial isoform X1 [Momordica charantia] >XP_022155462.1 pentatricopeptide repeat-containing protein At3g54980, mitochondrial isoform X1 [Momordica charantia] >XP_022155463.1 pentatricopeptide repeat-containing protein At3g54980, mitochondrial isoform X1 [Momordica charantia] >XP_022155465.1 pentatricopeptide repeat-containing protein At3g54980, mitochondrial isoform X1 [Momordica charantia])
HSP 1 Score: 591.3 bits (1523), Expect = 5.6e-165
Identity = 299/357 (83.75%), Postives = 313/357 (87.68%), Query Frame = 0
Query: 1 MIVKGISPNVVSYNNMILGHCRKGNINAACKVYKEMLDNGFARN---------------- 60
MIVKGISPN VSYNNMILGHC+KG+IN+ACK+YKEMLDNGF N
Sbjct: 477 MIVKGISPNAVSYNNMILGHCKKGDINSACKMYKEMLDNGFTPNVVTFSILMDGYFTKGD 536
Query: 61 ----------MMDANILPTDITLGTIIKGLCKAGRTSEGRDMFNKFVSQGFVPTCMAYKT 120
MMDANILPTDITLG IIKGLCKAGRTSEGRDMFNKFVSQGFVP+C+AY
Sbjct: 537 IENAFGIFHMMMDANILPTDITLGIIIKGLCKAGRTSEGRDMFNKFVSQGFVPSCLAYNI 596
Query: 121 IIDGFIKEGDINLALIVYTEMCEIGISPSIVTYTSLIDGFCKSNNIDLALKLRNMMKRKG 180
IIDGFIKEGDINLAL VY EMCEIGISPSIVTYTSLIDG CKSNNIDLALKLRN+M RKG
Sbjct: 597 IIDGFIKEGDINLALNVYREMCEIGISPSIVTYTSLIDGLCKSNNIDLALKLRNIMIRKG 656
Query: 181 LEMDITAYGTLIDSFCKRRDMRNARELFNELLGAGLSPNVIIYNSMIARFKNLNNMEAAI 240
LEMDITAYG LIDSFCKRRDMR+A ELFNELL AGLSPNVIIYNSMIA FKNLNNMEAAI
Sbjct: 657 LEMDITAYGMLIDSFCKRRDMRSASELFNELLQAGLSPNVIIYNSMIAGFKNLNNMEAAI 716
Query: 241 DLHKNMVNEGIPCDLQTYTSLIDGLLKEGRLLYASDLYSEMLSKGILPDDHTHTVLITGL 300
+L+K MV+EGIPCDLQTYTSLIDGLLKEGRLL+ASDLYSEMLSKGILPDDHTHTVLI L
Sbjct: 717 NLYKTMVDEGIPCDLQTYTSLIDGLLKEGRLLHASDLYSEMLSKGILPDDHTHTVLINXL 776
Query: 301 CNEGQLDNARKILEEMNGRNMTPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLARGLV 332
CN+GQL+NARKILEEMNGRNM PSVLIYNTLIAGHFKEGNLQEAFRLHDEMLARGLV
Sbjct: 777 CNKGQLENARKILEEMNGRNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLARGLV 833
BLAST of Sgr012884 vs. NCBI nr
Match:
XP_022947267.1 (pentatricopeptide repeat-containing protein At3g54980, mitochondrial-like [Cucurbita moschata] >XP_022947268.1 pentatricopeptide repeat-containing protein At3g54980, mitochondrial-like [Cucurbita moschata] >XP_022947269.1 pentatricopeptide repeat-containing protein At3g54980, mitochondrial-like [Cucurbita moschata] >XP_022947270.1 pentatricopeptide repeat-containing protein At3g54980, mitochondrial-like [Cucurbita moschata] >XP_022947271.1 pentatricopeptide repeat-containing protein At3g54980, mitochondrial-like [Cucurbita moschata] >XP_022947272.1 pentatricopeptide repeat-containing protein At3g54980, mitochondrial-like [Cucurbita moschata] >XP_022947274.1 pentatricopeptide repeat-containing protein At3g54980, mitochondrial-like [Cucurbita moschata])
HSP 1 Score: 583.6 bits (1503), Expect = 1.2e-162
Identity = 292/357 (81.79%), Postives = 310/357 (86.83%), Query Frame = 0
Query: 1 MIVKGISPNVVSYNNMILGHCRKGNINAACKVYKEMLDNGFARN---------------- 60
+IVKGISPN VSYN MILGHCRKGNI ACKVYK+MLDNGF N
Sbjct: 475 VIVKGISPNAVSYNTMILGHCRKGNIIEACKVYKKMLDNGFTPNVVTFSILMDGYFKKGD 534
Query: 61 ----------MMDANILPTDITLGTIIKGLCKAGRTSEGRDMFNKFVSQGFVPTCMAYKT 120
M+DANILPTDITLG IIKGLCKAGRTSEGRDMFNKFVS+G +PTC+AY T
Sbjct: 535 IDNAFSIFHKMIDANILPTDITLGIIIKGLCKAGRTSEGRDMFNKFVSEGSIPTCVAYNT 594
Query: 121 IIDGFIKEGDINLALIVYTEMCEIGISPSIVTYTSLIDGFCKSNNIDLALKLRNMMKRKG 180
IIDGFIKEGDINLAL V+ EMCE+G+SPSIVTYTS IDGFCKSNNIDLALKL N MKRKG
Sbjct: 595 IIDGFIKEGDINLALNVFREMCEVGVSPSIVTYTSFIDGFCKSNNIDLALKLLNDMKRKG 654
Query: 181 LEMDITAYGTLIDSFCKRRDMRNARELFNELLGAGLSPNVIIYNSMIARFKNLNNMEAAI 240
LEMDITAYGTLIDSFCKRRDM++A EL+NELLGAGLSPNV+IYNSMI FKNLNNMEAAI
Sbjct: 655 LEMDITAYGTLIDSFCKRRDMKSACELYNELLGAGLSPNVVIYNSMITGFKNLNNMEAAI 714
Query: 241 DLHKNMVNEGIPCDLQTYTSLIDGLLKEGRLLYASDLYSEMLSKGILPDDHTHTVLITGL 300
DL+KNMVNEGIPCDLQTYTSLIDGLLKEGRLLYASDLY+EMLSKGILPD+ TVLITGL
Sbjct: 715 DLYKNMVNEGIPCDLQTYTSLIDGLLKEGRLLYASDLYTEMLSKGILPDNRAQTVLITGL 774
Query: 301 CNEGQLDNARKILEEMNGRNMTPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLARGLV 332
CNEGQL+NARKILEEMNGRN+TPSVLIYNTLIAGHFKEGNLQEAFRLHDEML RGLV
Sbjct: 775 CNEGQLENARKILEEMNGRNLTPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLGRGLV 831
BLAST of Sgr012884 vs. NCBI nr
Match:
XP_038900535.1 (pentatricopeptide repeat-containing protein At3g54980, mitochondrial-like [Benincasa hispida] >XP_038900536.1 pentatricopeptide repeat-containing protein At3g54980, mitochondrial-like [Benincasa hispida] >XP_038900537.1 pentatricopeptide repeat-containing protein At3g54980, mitochondrial-like [Benincasa hispida] >XP_038900538.1 pentatricopeptide repeat-containing protein At3g54980, mitochondrial-like [Benincasa hispida] >XP_038900539.1 pentatricopeptide repeat-containing protein At3g54980, mitochondrial-like [Benincasa hispida] >XP_038900540.1 pentatricopeptide repeat-containing protein At3g54980, mitochondrial-like [Benincasa hispida] >XP_038900541.1 pentatricopeptide repeat-containing protein At3g54980, mitochondrial-like [Benincasa hispida])
HSP 1 Score: 583.2 bits (1502), Expect = 1.5e-162
Identity = 290/357 (81.23%), Postives = 311/357 (87.11%), Query Frame = 0
Query: 1 MIVKGISPNVVSYNNMILGHCRKGNINAACKVYKEMLDNGFARN---------------- 60
+IVKGISPN VSYNN++LGHCR+GNINAACKVYKEMLDNGF N
Sbjct: 475 VIVKGISPNAVSYNNIMLGHCREGNINAACKVYKEMLDNGFTPNVYTFSILMDGYFKKGD 534
Query: 61 ----------MMDANILPTDITLGTIIKGLCKAGRTSEGRDMFNKFVSQGFVPTCMAYKT 120
MMDANILPTD+T GTIIKGLCKAGRTSEGRD+F KFVSQGFVPTCMAY
Sbjct: 535 IDNAFSIFHRMMDANILPTDVTSGTIIKGLCKAGRTSEGRDLFKKFVSQGFVPTCMAYNI 594
Query: 121 IIDGFIKEGDINLALIVYTEMCEIGISPSIVTYTSLIDGFCKSNNIDLALKLRNMMKRKG 180
IIDGF+KE DINLAL VY EMCE+GI+PS+VTYTSLIDGFCKSNNIDLALKL N MKRKG
Sbjct: 595 IIDGFVKEDDINLALDVYREMCEVGITPSVVTYTSLIDGFCKSNNIDLALKLWNDMKRKG 654
Query: 181 LEMDITAYGTLIDSFCKRRDMRNARELFNELLGAGLSPNVIIYNSMIARFKNLNNMEAAI 240
LE+D+TAYGTLIDSFCKRRDM++A ELFNELLGAGLSPNVIIYNSMI FKNLNNMEAAI
Sbjct: 655 LELDVTAYGTLIDSFCKRRDMKSAHELFNELLGAGLSPNVIIYNSMITGFKNLNNMEAAI 714
Query: 241 DLHKNMVNEGIPCDLQTYTSLIDGLLKEGRLLYASDLYSEMLSKGILPDDHTHTVLITGL 300
DL+KNMVNEGIPCDL TYTSLIDGLLKEGRLLYASDLY+EMLSKGILPDD T+TVLI GL
Sbjct: 715 DLYKNMVNEGIPCDLITYTSLIDGLLKEGRLLYASDLYNEMLSKGILPDDQTYTVLINGL 774
Query: 301 CNEGQLDNARKILEEMNGRNMTPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLARGLV 332
CN+ QL+NA +ILE+MNGRNMTPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLARGLV
Sbjct: 775 CNKRQLENAHRILEDMNGRNMTPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLARGLV 831
BLAST of Sgr012884 vs. NCBI nr
Match:
KAG6605302.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 581.6 bits (1498), Expect = 4.5e-162
Identity = 296/377 (78.51%), Postives = 316/377 (83.82%), Query Frame = 0
Query: 1 MIVKGISPNVVSYNNMILGHCRKGNINAACKVYKEMLDNGFARN---------------- 60
+IVKGISPN VSYN MILGHCRKGNI A KVYKEMLDNGF N
Sbjct: 245 VIVKGISPNAVSYNTMILGHCRKGNIIEAFKVYKEMLDNGFTPNVVTFSILMDGYFKKGD 304
Query: 61 ----------MMDANILPTDITLGTIIKGLCKAGRTSEGRDMFNKFVSQGFVPTCMAYKT 120
M+DANILPTDITLG IIKGLCKAGRTSEGRDMFNKFVS+G +PTC+AY T
Sbjct: 305 IDNAFSIFHKMIDANILPTDITLGIIIKGLCKAGRTSEGRDMFNKFVSEGSIPTCVAYNT 364
Query: 121 IIDGFIKEGDINLALIVYTEMCEIGISPSIVTYTSLIDGFCKSNNIDLALKLRNMMKRKG 180
IIDGFIKEGDINLAL V+ EMCE+G+SPSIVTYTS IDGFCKSNNIDLALKL N MKRKG
Sbjct: 365 IIDGFIKEGDINLALNVFREMCEVGVSPSIVTYTSFIDGFCKSNNIDLALKLLNDMKRKG 424
Query: 181 LEMDITAYGTLIDSFCKRRDMRNARELFNELLGAGLSPNVIIYNSMIARFKNLNNMEAAI 240
LEMDITAYGTLIDSFCKRRDM++A EL+NELLGAGLSPNV+IYNSMI FKNLNNMEAAI
Sbjct: 425 LEMDITAYGTLIDSFCKRRDMKSACELYNELLGAGLSPNVVIYNSMITGFKNLNNMEAAI 484
Query: 241 DLHKNMVNEGIPCDLQTYTSLIDGLLKEGRLLYASDLYSEMLSKGILPDDHTHTVLITGL 300
DL+KNMVNEGIPCDLQTYTSLIDGLLKEGRLLYASDLY+EMLSKGILPD+ TVLITGL
Sbjct: 485 DLYKNMVNEGIPCDLQTYTSLIDGLLKEGRLLYASDLYTEMLSKGILPDNRAQTVLITGL 544
Query: 301 CNEGQLDNARKILEEMNGRNMTPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLARGLV--- 345
CNEGQL+NARKILEEMNGRN+TPSVLIYNTLIAGHFKEGNLQEAFRLHDEML RGLV
Sbjct: 545 CNEGQLENARKILEEMNGRNLTPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLGRGLVPDN 604
BLAST of Sgr012884 vs. ExPASy Swiss-Prot
Match:
O80958 (Pentatricopeptide repeat-containing protein At2g39230, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=LOJ PE=1 SV=1)
HSP 1 Score: 356.7 bits (914), Expect = 3.1e-97
Identity = 177/355 (49.86%), Postives = 240/355 (67.61%), Query Frame = 0
Query: 4 KGISPNVVSYNNMILGHCRKGNINAACKVYKEMLDNGFARN------------------- 63
KGI PNVV YNNM+L HCR N++ A ++ EML+ G N
Sbjct: 478 KGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQN 537
Query: 64 -------MMDANILPTDITLGTIIKGLCKAGRTSEGRDMFNKFVSQ-GFVPTCMAYKTII 123
M +N ++ TII GLCK G+TS+ ++M + + + +C +Y +II
Sbjct: 538 AWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSII 597
Query: 124 DGFIKEGDINLALIVYTEMCEIGISPSIVTYTSLIDGFCKSNNIDLALKLRNMMKRKGLE 183
DGF+K GD + A+ Y EM E G SP++VT+TSLI+GFCKSN +DLAL++ + MK L+
Sbjct: 598 DGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELK 657
Query: 184 MDITAYGTLIDSFCKRRDMRNARELFNELLGAGLSPNVIIYNSMIARFKNLNNMEAAIDL 243
+D+ AYG LID FCK+ DM+ A LF+EL GL PNV +YNS+I+ F+NL M+AAIDL
Sbjct: 658 LDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDL 717
Query: 244 HKNMVNEGIPCDLQTYTSLIDGLLKEGRLLYASDLYSEMLSKGILPDDHTHTVLITGLCN 303
+K MVN+GI CDL TYT++IDGLLK+G + ASDLYSE+L GI+PD+ H VL+ GL
Sbjct: 718 YKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSK 777
Query: 304 EGQLDNARKILEEMNGRNMTPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLARGLV 332
+GQ A K+LEEM +++TP+VL+Y+T+IAGH +EGNL EAFRLHDEML +G+V
Sbjct: 778 KGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIV 832
BLAST of Sgr012884 vs. ExPASy Swiss-Prot
Match:
Q9SV46 (Pentatricopeptide repeat-containing protein At3g54980, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g54980 PE=1 SV=1)
HSP 1 Score: 355.1 bits (910), Expect = 8.9e-97
Identity = 173/355 (48.73%), Postives = 244/355 (68.73%), Query Frame = 0
Query: 4 KGISPNVVSYNNMILGHCRKGNINAACKVYKEMLDNGFARN------------------- 63
+GI PNVVSYNN++LGHCR+ N++ A V+ +L+ G N
Sbjct: 472 RGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQN 531
Query: 64 -------MMDANILPTDITLGTIIKGLCKAGRTSEGRDMF-NKFVSQGFVPTCMAYKTII 123
M +NI + TII GLCK G+TS+ R++ N + +CM+Y +II
Sbjct: 532 ALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSII 591
Query: 124 DGFIKEGDINLALIVYTEMCEIGISPSIVTYTSLIDGFCKSNNIDLALKLRNMMKRKGLE 183
DGF KEG+++ A+ Y EMC GISP+++TYTSL++G CK+N +D AL++R+ MK KG++
Sbjct: 592 DGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVK 651
Query: 184 MDITAYGTLIDSFCKRRDMRNARELFNELLGAGLSPNVIIYNSMIARFKNLNNMEAAIDL 243
+DI AYG LID FCKR +M +A LF+ELL GL+P+ IYNS+I+ F+NL NM AA+DL
Sbjct: 652 LDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDL 711
Query: 244 HKNMVNEGIPCDLQTYTSLIDGLLKEGRLLYASDLYSEMLSKGILPDDHTHTVLITGLCN 303
+K M+ +G+ CDL TYT+LIDGLLK+G L+ AS+LY+EM + G++PD+ +TV++ GL
Sbjct: 712 YKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSK 771
Query: 304 EGQLDNARKILEEMNGRNMTPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLARGLV 332
+GQ K+ EEM N+TP+VLIYN +IAGH++EGNL EAFRLHDEML +G++
Sbjct: 772 KGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGIL 826
BLAST of Sgr012884 vs. ExPASy Swiss-Prot
Match:
Q9FIX3 (Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX=3702 GN=EMB2745 PE=2 SV=1)
HSP 1 Score: 213.4 bits (542), Expect = 4.2e-54
Identity = 123/394 (31.22%), Postives = 200/394 (50.76%), Query Frame = 0
Query: 4 KGISPNVVSYNNMILGHCRKGNINAACKVYKEMLDNGFARNMMDANILPTDITLGTIIKG 63
+G S + V+YN +I G+C++GN + A ++ EML +G + P+ IT ++I
Sbjct: 304 RGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHG---------LTPSVITYTSLIHS 363
Query: 64 LCKAGRTSEGRDMFNKFVSQGFVPTCMAYKTIIDGFIKEGDINLALIVYTEMCEIGISPS 123
+CKAG + + ++ +G P Y T++DGF ++G +N A V EM + G SPS
Sbjct: 364 MCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPS 423
Query: 124 IVTYTSLIDGFCKSNNIDLALKLRNMMKRKGLEMDITAYGTLIDSFCKRRDMRNARELFN 183
+VTY +LI+G C + ++ A+ + MK KGL D+ +Y T++ FC+ D+ A +
Sbjct: 424 VVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKR 483
Query: 184 ELLGAGLSPNVIIYNSMIARFKNLNNMEAAIDLHKNMVNEGIPCDLQTYTSLIDGLLKEG 243
E++ G+ P+ I Y+S+I F + A DL++ M+ G+P D TYT+LI+ EG
Sbjct: 484 EMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEG 543
Query: 244 RLLYASDLYSEMLSKGILPDDHTHTVLITGL----------------------------- 303
L A L++EM+ KG+LPD T++VLI GL
Sbjct: 544 DLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYH 603
Query: 304 ---------------------CNEGQLDNARKILEEMNGRNMTPSVLIYNTLIAGHFKEG 348
C +G + A ++ E M G+N P YN +I GH + G
Sbjct: 604 TLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAG 663
BLAST of Sgr012884 vs. ExPASy Swiss-Prot
Match:
Q0WVK7 (Pentatricopeptide repeat-containing protein At1g05670, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g05670 PE=2 SV=1)
HSP 1 Score: 210.7 bits (535), Expect = 2.7e-53
Identity = 110/330 (33.33%), Postives = 189/330 (57.27%), Query Frame = 0
Query: 1 MIVKGISPNVVSYNNMILGHCRKGNINAACKVYKEMLDNGFARNMMDANILPTDITLGTI 60
M +KG +P+V+SY+ ++ G+CR G ++ K+ + M G + P G+I
Sbjct: 272 MELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKG---------LKPNSYIYGSI 331
Query: 61 IKGLCKAGRTSEGRDMFNKFVSQGFVPTCMAYKTIIDGFIKEGDINLALIVYTEMCEIGI 120
I LC+ + +E + F++ + QG +P + Y T+IDGF K GDI A + EM I
Sbjct: 332 IGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDI 391
Query: 121 SPSIVTYTSLIDGFCKSNNIDLALKLRNMMKRKGLEMDITAYGTLIDSFCKRRDMRNARE 180
+P ++TYT++I GFC+ ++ A KL + M KGLE D + LI+ +CK M++A
Sbjct: 392 TPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFR 451
Query: 181 LFNELLGAGLSPNVIIYNSMIARFKNLNNMEAAIDLHKNMVNEGIPCDLQTYTSLIDGLL 240
+ N ++ AG SPNV+ Y ++I ++++A +L M G+ ++ TY S+++GL
Sbjct: 452 VHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLC 511
Query: 241 KEGRLLYASDLYSEMLSKGILPDDHTHTVLITGLCNEGQLDNARKILEEMNGRNMTPSVL 300
K G + A L E + G+ D T+T L+ C G++D A++IL+EM G+ + P+++
Sbjct: 512 KSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIV 571
Query: 301 IYNTLIAGHFKEGNLQEAFRLHDEMLARGL 331
+N L+ G G L++ +L + MLA+G+
Sbjct: 572 TFNVLMNGFCLHGMLEDGEKLLNWMLAKGI 592
BLAST of Sgr012884 vs. ExPASy Swiss-Prot
Match:
Q9SH26 (Pentatricopeptide repeat-containing protein At1g63400 OS=Arabidopsis thaliana OX=3702 GN=At1g63400 PE=2 SV=1)
HSP 1 Score: 206.1 bits (523), Expect = 6.7e-52
Identity = 112/327 (34.25%), Postives = 176/327 (53.82%), Query Frame = 0
Query: 5 GISPNVVSYNNMILGHCRKGNINAACKVYKEMLDNGFARNMMDANILPTDITLGTIIKGL 64
GIS N+ +YN +I CR+ I+ A + +M+ G+ P+ +TL +++ G
Sbjct: 115 GISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYE---------PSIVTLSSLLNGY 174
Query: 65 CKAGRTSEGRDMFNKFVSQGFVPTCMAYKTIIDGFIKEGDINLALIVYTEMCEIGISPSI 124
C R S+ + ++ V G+ P + + T+I G + A+ + M + G P++
Sbjct: 175 CHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNL 234
Query: 125 VTYTSLIDGFCKSNNIDLALKLRNMMKRKGLEMDITAYGTLIDSFCKRRDMRNARELFNE 184
VTY +++G CK +IDLA L N M+ +E ++ Y T+IDS CK R +A LF E
Sbjct: 235 VTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTE 294
Query: 185 LLGAGLSPNVIIYNSMIARFKNLNNMEAAIDLHKNMVNEGIPCDLQTYTSLIDGLLKEGR 244
+ G+ PNVI Y+S+I+ N A L +M+ I ++ T+ +LID +KEG+
Sbjct: 295 MENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGK 354
Query: 245 LLYASDLYSEMLSKGILPDDHTHTVLITGLCNEGQLDNARKILEEMNGRNMTPSVLIYNT 304
L+ A LY EM+ + I PD T++ LI G C +LD A+ + E M ++ P+V+ YNT
Sbjct: 355 LVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNT 414
Query: 305 LIAGHFKEGNLQEAFRLHDEMLARGLV 332
LI G K + E L EM RGLV
Sbjct: 415 LINGFCKAKRIDEGVELFREMSQRGLV 432
BLAST of Sgr012884 vs. ExPASy TrEMBL
Match:
A0A6J1DVN2 (pentatricopeptide repeat-containing protein At3g54980, mitochondrial-like OS=Momordica charantia OX=3673 GN=LOC111024480 PE=4 SV=1)
HSP 1 Score: 594.7 bits (1532), Expect = 2.5e-166
Identity = 300/357 (84.03%), Postives = 313/357 (87.68%), Query Frame = 0
Query: 1 MIVKGISPNVVSYNNMILGHCRKGNINAACKVYKEMLDNGFARN---------------- 60
MIVKGISPN VSYNNMILGHC+ GNINAACKVYKEMLDN F N
Sbjct: 476 MIVKGISPNAVSYNNMILGHCKNGNINAACKVYKEMLDNCFTPNVVTFSILMDGYFKKGD 535
Query: 61 ----------MMDANILPTDITLGTIIKGLCKAGRTSEGRDMFNKFVSQGFVPTCMAYKT 120
MMDANILPTDITLG IIKGLCK GRTSEGRDMFNKFVSQG VP+CMAY T
Sbjct: 536 IENAFGIFHMMMDANILPTDITLGIIIKGLCKGGRTSEGRDMFNKFVSQGLVPSCMAYNT 595
Query: 121 IIDGFIKEGDINLALIVYTEMCEIGISPSIVTYTSLIDGFCKSNNIDLALKLRNMMKRKG 180
IIDGFIKEGDINLAL VY EMCEIGISPSIVTYTSLIDGFCKSNNIDLALKL N+M+RKG
Sbjct: 596 IIDGFIKEGDINLALNVYREMCEIGISPSIVTYTSLIDGFCKSNNIDLALKLLNVMRRKG 655
Query: 181 LEMDITAYGTLIDSFCKRRDMRNARELFNELLGAGLSPNVIIYNSMIARFKNLNNMEAAI 240
LEMDITAYG LIDSFCKRRDMRNA ELFNELLG GLSPNVIIYNSMIA FKNLNNMEAAI
Sbjct: 656 LEMDITAYGMLIDSFCKRRDMRNASELFNELLGVGLSPNVIIYNSMIAGFKNLNNMEAAI 715
Query: 241 DLHKNMVNEGIPCDLQTYTSLIDGLLKEGRLLYASDLYSEMLSKGILPDDHTHTVLITGL 300
DL+K MV+EGIPCDLQTYTSLIDGLLKEG+LL+ASDLYSEMLS+GILPDDHTHTVLI+GL
Sbjct: 716 DLYKAMVDEGIPCDLQTYTSLIDGLLKEGKLLHASDLYSEMLSQGILPDDHTHTVLISGL 775
Query: 301 CNEGQLDNARKILEEMNGRNMTPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLARGLV 332
CN+GQL+NARKILEEMNGRN+ PSVLIYNTLIAGHFKEGNLQEAFRLHDEMLARGLV
Sbjct: 776 CNKGQLENARKILEEMNGRNVIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLARGLV 832
BLAST of Sgr012884 vs. ExPASy TrEMBL
Match:
A0A6J1DPE9 (pentatricopeptide repeat-containing protein At3g54980, mitochondrial isoform X1 OS=Momordica charantia OX=3673 GN=LOC111022598 PE=3 SV=1)
HSP 1 Score: 591.3 bits (1523), Expect = 2.7e-165
Identity = 299/357 (83.75%), Postives = 313/357 (87.68%), Query Frame = 0
Query: 1 MIVKGISPNVVSYNNMILGHCRKGNINAACKVYKEMLDNGFARN---------------- 60
MIVKGISPN VSYNNMILGHC+KG+IN+ACK+YKEMLDNGF N
Sbjct: 477 MIVKGISPNAVSYNNMILGHCKKGDINSACKMYKEMLDNGFTPNVVTFSILMDGYFTKGD 536
Query: 61 ----------MMDANILPTDITLGTIIKGLCKAGRTSEGRDMFNKFVSQGFVPTCMAYKT 120
MMDANILPTDITLG IIKGLCKAGRTSEGRDMFNKFVSQGFVP+C+AY
Sbjct: 537 IENAFGIFHMMMDANILPTDITLGIIIKGLCKAGRTSEGRDMFNKFVSQGFVPSCLAYNI 596
Query: 121 IIDGFIKEGDINLALIVYTEMCEIGISPSIVTYTSLIDGFCKSNNIDLALKLRNMMKRKG 180
IIDGFIKEGDINLAL VY EMCEIGISPSIVTYTSLIDG CKSNNIDLALKLRN+M RKG
Sbjct: 597 IIDGFIKEGDINLALNVYREMCEIGISPSIVTYTSLIDGLCKSNNIDLALKLRNIMIRKG 656
Query: 181 LEMDITAYGTLIDSFCKRRDMRNARELFNELLGAGLSPNVIIYNSMIARFKNLNNMEAAI 240
LEMDITAYG LIDSFCKRRDMR+A ELFNELL AGLSPNVIIYNSMIA FKNLNNMEAAI
Sbjct: 657 LEMDITAYGMLIDSFCKRRDMRSASELFNELLQAGLSPNVIIYNSMIAGFKNLNNMEAAI 716
Query: 241 DLHKNMVNEGIPCDLQTYTSLIDGLLKEGRLLYASDLYSEMLSKGILPDDHTHTVLITGL 300
+L+K MV+EGIPCDLQTYTSLIDGLLKEGRLL+ASDLYSEMLSKGILPDDHTHTVLI L
Sbjct: 717 NLYKTMVDEGIPCDLQTYTSLIDGLLKEGRLLHASDLYSEMLSKGILPDDHTHTVLINXL 776
Query: 301 CNEGQLDNARKILEEMNGRNMTPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLARGLV 332
CN+GQL+NARKILEEMNGRNM PSVLIYNTLIAGHFKEGNLQEAFRLHDEMLARGLV
Sbjct: 777 CNKGQLENARKILEEMNGRNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLARGLV 833
BLAST of Sgr012884 vs. ExPASy TrEMBL
Match:
A0A6J1G5Y6 (pentatricopeptide repeat-containing protein At3g54980, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111451185 PE=4 SV=1)
HSP 1 Score: 583.6 bits (1503), Expect = 5.7e-163
Identity = 292/357 (81.79%), Postives = 310/357 (86.83%), Query Frame = 0
Query: 1 MIVKGISPNVVSYNNMILGHCRKGNINAACKVYKEMLDNGFARN---------------- 60
+IVKGISPN VSYN MILGHCRKGNI ACKVYK+MLDNGF N
Sbjct: 475 VIVKGISPNAVSYNTMILGHCRKGNIIEACKVYKKMLDNGFTPNVVTFSILMDGYFKKGD 534
Query: 61 ----------MMDANILPTDITLGTIIKGLCKAGRTSEGRDMFNKFVSQGFVPTCMAYKT 120
M+DANILPTDITLG IIKGLCKAGRTSEGRDMFNKFVS+G +PTC+AY T
Sbjct: 535 IDNAFSIFHKMIDANILPTDITLGIIIKGLCKAGRTSEGRDMFNKFVSEGSIPTCVAYNT 594
Query: 121 IIDGFIKEGDINLALIVYTEMCEIGISPSIVTYTSLIDGFCKSNNIDLALKLRNMMKRKG 180
IIDGFIKEGDINLAL V+ EMCE+G+SPSIVTYTS IDGFCKSNNIDLALKL N MKRKG
Sbjct: 595 IIDGFIKEGDINLALNVFREMCEVGVSPSIVTYTSFIDGFCKSNNIDLALKLLNDMKRKG 654
Query: 181 LEMDITAYGTLIDSFCKRRDMRNARELFNELLGAGLSPNVIIYNSMIARFKNLNNMEAAI 240
LEMDITAYGTLIDSFCKRRDM++A EL+NELLGAGLSPNV+IYNSMI FKNLNNMEAAI
Sbjct: 655 LEMDITAYGTLIDSFCKRRDMKSACELYNELLGAGLSPNVVIYNSMITGFKNLNNMEAAI 714
Query: 241 DLHKNMVNEGIPCDLQTYTSLIDGLLKEGRLLYASDLYSEMLSKGILPDDHTHTVLITGL 300
DL+KNMVNEGIPCDLQTYTSLIDGLLKEGRLLYASDLY+EMLSKGILPD+ TVLITGL
Sbjct: 715 DLYKNMVNEGIPCDLQTYTSLIDGLLKEGRLLYASDLYTEMLSKGILPDNRAQTVLITGL 774
Query: 301 CNEGQLDNARKILEEMNGRNMTPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLARGLV 332
CNEGQL+NARKILEEMNGRN+TPSVLIYNTLIAGHFKEGNLQEAFRLHDEML RGLV
Sbjct: 775 CNEGQLENARKILEEMNGRNLTPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLGRGLV 831
BLAST of Sgr012884 vs. ExPASy TrEMBL
Match:
A0A6J1L247 (pentatricopeptide repeat-containing protein At3g54980, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111499716 PE=4 SV=1)
HSP 1 Score: 578.9 bits (1491), Expect = 1.4e-161
Identity = 290/357 (81.23%), Postives = 309/357 (86.55%), Query Frame = 0
Query: 1 MIVKGISPNVVSYNNMILGHCRKGNINAACKVYKEMLDNGFARN---------------- 60
+IVKGISPN VSYN MILGHCRKGN+ ACKVYKEM DNGF N
Sbjct: 475 VIVKGISPNAVSYNTMILGHCRKGNVIEACKVYKEMQDNGFTPNVVTFSILMDGYFKKGD 534
Query: 61 ----------MMDANILPTDITLGTIIKGLCKAGRTSEGRDMFNKFVSQGFVPTCMAYKT 120
M+DANILPTDITLG IIKGLCKAGRTSEGRDMFNKFVS+G +PTC+AY T
Sbjct: 535 IDNAFSIFHKMIDANILPTDITLGIIIKGLCKAGRTSEGRDMFNKFVSEGSIPTCVAYNT 594
Query: 121 IIDGFIKEGDINLALIVYTEMCEIGISPSIVTYTSLIDGFCKSNNIDLALKLRNMMKRKG 180
IIDGFIKEGDINLAL V+ EMCE+GISPSIVTYTSLIDGFCKSNNIDLALKL N MKRKG
Sbjct: 595 IIDGFIKEGDINLALNVFREMCEVGISPSIVTYTSLIDGFCKSNNIDLALKLLNDMKRKG 654
Query: 181 LEMDITAYGTLIDSFCKRRDMRNARELFNELLGAGLSPNVIIYNSMIARFKNLNNMEAAI 240
LEMDITAYGTLIDSFCKRRDM++A EL+NELLGAGLSPNV+IYNSMI FKNLNNM+AAI
Sbjct: 655 LEMDITAYGTLIDSFCKRRDMKSACELYNELLGAGLSPNVVIYNSMITGFKNLNNMKAAI 714
Query: 241 DLHKNMVNEGIPCDLQTYTSLIDGLLKEGRLLYASDLYSEMLSKGILPDDHTHTVLITGL 300
DL+KNMVNEGIPCDLQTYTSLIDGLLKEGRLLYASDLY+EMLSKGI PD+ TVLITGL
Sbjct: 715 DLYKNMVNEGIPCDLQTYTSLIDGLLKEGRLLYASDLYTEMLSKGISPDNRAQTVLITGL 774
Query: 301 CNEGQLDNARKILEEMNGRNMTPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLARGLV 332
CN+GQL+NARKILEEMNGRN+TPSVLIYNTLIAGHFKEGNLQEAFRLHDEML RGLV
Sbjct: 775 CNKGQLENARKILEEMNGRNLTPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLGRGLV 831
BLAST of Sgr012884 vs. ExPASy TrEMBL
Match:
A0A1S4E1T8 (pentatricopeptide repeat-containing protein At3g54980, mitochondrial isoform X2 OS=Cucumis melo OX=3656 GN=LOC103497526 PE=4 SV=1)
HSP 1 Score: 556.6 bits (1433), Expect = 7.5e-155
Identity = 276/357 (77.31%), Postives = 299/357 (83.75%), Query Frame = 0
Query: 1 MIVKGISPNVVSYNNMILGHCRKGNINAACKVYKEMLDNGFARN---------------- 60
+I KGISPNVVSYNN+ILGHCRK NINAACKVYKEMLDNGF N
Sbjct: 256 VIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGD 315
Query: 61 ----------MMDANILPTDITLGTIIKGLCKAGRTSEGRDMFNKFVSQGFVPTCMAYKT 120
M DANILPTDITLG IIKGLCK GRTSEGRD+FNKFVSQGF+PTCM Y T
Sbjct: 316 IENAFSIFHRMKDANILPTDITLGIIIKGLCKTGRTSEGRDLFNKFVSQGFIPTCMPYNT 375
Query: 121 IIDGFIKEGDINLALIVYTEMCEIGISPSIVTYTSLIDGFCKSNNIDLALKLRNMMKRKG 180
IIDGFIKEG+INLA VY EMCE+GI+PS VTYTSLIDGFCK NNIDLALKL N MKRKG
Sbjct: 376 IIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKG 435
Query: 181 LEMDITAYGTLIDSFCKRRDMRNARELFNELLGAGLSPNVIIYNSMIARFKNLNNMEAAI 240
LEMDI AYGTLID FCKRRDM++A EL NEL GAGLSPN IYNSMIA FKN+NN+EAAI
Sbjct: 436 LEMDIKAYGTLIDGFCKRRDMKSANELLNELRGAGLSPNRFIYNSMIAGFKNMNNIEAAI 495
Query: 241 DLHKNMVNEGIPCDLQTYTSLIDGLLKEGRLLYASDLYSEMLSKGILPDDHTHTVLITGL 300
DL+KNMVNEGIPCDL+TYTS+IDGLLK GRLLYASD+++EMLS+GILPDD TVLI GL
Sbjct: 496 DLYKNMVNEGIPCDLKTYTSMIDGLLKNGRLLYASDIHTEMLSRGILPDDRAQTVLINGL 555
Query: 301 CNEGQLDNARKILEEMNGRNMTPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLARGLV 332
CN+GQ +NARKILE+MNG+NM PSVLIYNTLIAGHFKEGNLQEAFRLHDEML RG+V
Sbjct: 556 CNKGQFENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDRGIV 612
BLAST of Sgr012884 vs. TAIR 10
Match:
AT2G39230.1 (LATERAL ORGAN JUNCTION )
HSP 1 Score: 356.7 bits (914), Expect = 2.2e-98
Identity = 177/355 (49.86%), Postives = 240/355 (67.61%), Query Frame = 0
Query: 4 KGISPNVVSYNNMILGHCRKGNINAACKVYKEMLDNGFARN------------------- 63
KGI PNVV YNNM+L HCR N++ A ++ EML+ G N
Sbjct: 478 KGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQN 537
Query: 64 -------MMDANILPTDITLGTIIKGLCKAGRTSEGRDMFNKFVSQ-GFVPTCMAYKTII 123
M +N ++ TII GLCK G+TS+ ++M + + + +C +Y +II
Sbjct: 538 AWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSII 597
Query: 124 DGFIKEGDINLALIVYTEMCEIGISPSIVTYTSLIDGFCKSNNIDLALKLRNMMKRKGLE 183
DGF+K GD + A+ Y EM E G SP++VT+TSLI+GFCKSN +DLAL++ + MK L+
Sbjct: 598 DGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELK 657
Query: 184 MDITAYGTLIDSFCKRRDMRNARELFNELLGAGLSPNVIIYNSMIARFKNLNNMEAAIDL 243
+D+ AYG LID FCK+ DM+ A LF+EL GL PNV +YNS+I+ F+NL M+AAIDL
Sbjct: 658 LDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDL 717
Query: 244 HKNMVNEGIPCDLQTYTSLIDGLLKEGRLLYASDLYSEMLSKGILPDDHTHTVLITGLCN 303
+K MVN+GI CDL TYT++IDGLLK+G + ASDLYSE+L GI+PD+ H VL+ GL
Sbjct: 718 YKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSK 777
Query: 304 EGQLDNARKILEEMNGRNMTPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLARGLV 332
+GQ A K+LEEM +++TP+VL+Y+T+IAGH +EGNL EAFRLHDEML +G+V
Sbjct: 778 KGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIV 832
BLAST of Sgr012884 vs. TAIR 10
Match:
AT3G54980.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 355.1 bits (910), Expect = 6.3e-98
Identity = 173/355 (48.73%), Postives = 244/355 (68.73%), Query Frame = 0
Query: 4 KGISPNVVSYNNMILGHCRKGNINAACKVYKEMLDNGFARN------------------- 63
+GI PNVVSYNN++LGHCR+ N++ A V+ +L+ G N
Sbjct: 472 RGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQN 531
Query: 64 -------MMDANILPTDITLGTIIKGLCKAGRTSEGRDMF-NKFVSQGFVPTCMAYKTII 123
M +NI + TII GLCK G+TS+ R++ N + +CM+Y +II
Sbjct: 532 ALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSII 591
Query: 124 DGFIKEGDINLALIVYTEMCEIGISPSIVTYTSLIDGFCKSNNIDLALKLRNMMKRKGLE 183
DGF KEG+++ A+ Y EMC GISP+++TYTSL++G CK+N +D AL++R+ MK KG++
Sbjct: 592 DGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVK 651
Query: 184 MDITAYGTLIDSFCKRRDMRNARELFNELLGAGLSPNVIIYNSMIARFKNLNNMEAAIDL 243
+DI AYG LID FCKR +M +A LF+ELL GL+P+ IYNS+I+ F+NL NM AA+DL
Sbjct: 652 LDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDL 711
Query: 244 HKNMVNEGIPCDLQTYTSLIDGLLKEGRLLYASDLYSEMLSKGILPDDHTHTVLITGLCN 303
+K M+ +G+ CDL TYT+LIDGLLK+G L+ AS+LY+EM + G++PD+ +TV++ GL
Sbjct: 712 YKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSK 771
Query: 304 EGQLDNARKILEEMNGRNMTPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLARGLV 332
+GQ K+ EEM N+TP+VLIYN +IAGH++EGNL EAFRLHDEML +G++
Sbjct: 772 KGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGIL 826
BLAST of Sgr012884 vs. TAIR 10
Match:
AT5G39710.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 213.4 bits (542), Expect = 3.0e-55
Identity = 123/394 (31.22%), Postives = 200/394 (50.76%), Query Frame = 0
Query: 4 KGISPNVVSYNNMILGHCRKGNINAACKVYKEMLDNGFARNMMDANILPTDITLGTIIKG 63
+G S + V+YN +I G+C++GN + A ++ EML +G + P+ IT ++I
Sbjct: 304 RGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHG---------LTPSVITYTSLIHS 363
Query: 64 LCKAGRTSEGRDMFNKFVSQGFVPTCMAYKTIIDGFIKEGDINLALIVYTEMCEIGISPS 123
+CKAG + + ++ +G P Y T++DGF ++G +N A V EM + G SPS
Sbjct: 364 MCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPS 423
Query: 124 IVTYTSLIDGFCKSNNIDLALKLRNMMKRKGLEMDITAYGTLIDSFCKRRDMRNARELFN 183
+VTY +LI+G C + ++ A+ + MK KGL D+ +Y T++ FC+ D+ A +
Sbjct: 424 VVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKR 483
Query: 184 ELLGAGLSPNVIIYNSMIARFKNLNNMEAAIDLHKNMVNEGIPCDLQTYTSLIDGLLKEG 243
E++ G+ P+ I Y+S+I F + A DL++ M+ G+P D TYT+LI+ EG
Sbjct: 484 EMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEG 543
Query: 244 RLLYASDLYSEMLSKGILPDDHTHTVLITGL----------------------------- 303
L A L++EM+ KG+LPD T++VLI GL
Sbjct: 544 DLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYH 603
Query: 304 ---------------------CNEGQLDNARKILEEMNGRNMTPSVLIYNTLIAGHFKEG 348
C +G + A ++ E M G+N P YN +I GH + G
Sbjct: 604 TLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAG 663
BLAST of Sgr012884 vs. TAIR 10
Match:
AT1G05670.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )
HSP 1 Score: 210.7 bits (535), Expect = 1.9e-54
Identity = 110/330 (33.33%), Postives = 189/330 (57.27%), Query Frame = 0
Query: 1 MIVKGISPNVVSYNNMILGHCRKGNINAACKVYKEMLDNGFARNMMDANILPTDITLGTI 60
M +KG +P+V+SY+ ++ G+CR G ++ K+ + M G + P G+I
Sbjct: 272 MELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKG---------LKPNSYIYGSI 331
Query: 61 IKGLCKAGRTSEGRDMFNKFVSQGFVPTCMAYKTIIDGFIKEGDINLALIVYTEMCEIGI 120
I LC+ + +E + F++ + QG +P + Y T+IDGF K GDI A + EM I
Sbjct: 332 IGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDI 391
Query: 121 SPSIVTYTSLIDGFCKSNNIDLALKLRNMMKRKGLEMDITAYGTLIDSFCKRRDMRNARE 180
+P ++TYT++I GFC+ ++ A KL + M KGLE D + LI+ +CK M++A
Sbjct: 392 TPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFR 451
Query: 181 LFNELLGAGLSPNVIIYNSMIARFKNLNNMEAAIDLHKNMVNEGIPCDLQTYTSLIDGLL 240
+ N ++ AG SPNV+ Y ++I ++++A +L M G+ ++ TY S+++GL
Sbjct: 452 VHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLC 511
Query: 241 KEGRLLYASDLYSEMLSKGILPDDHTHTVLITGLCNEGQLDNARKILEEMNGRNMTPSVL 300
K G + A L E + G+ D T+T L+ C G++D A++IL+EM G+ + P+++
Sbjct: 512 KSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIV 571
Query: 301 IYNTLIAGHFKEGNLQEAFRLHDEMLARGL 331
+N L+ G G L++ +L + MLA+G+
Sbjct: 572 TFNVLMNGFCLHGMLEDGEKLLNWMLAKGI 592
BLAST of Sgr012884 vs. TAIR 10
Match:
AT1G05670.2 (Pentatricopeptide repeat (PPR-like) superfamily protein )
HSP 1 Score: 210.7 bits (535), Expect = 1.9e-54
Identity = 110/330 (33.33%), Postives = 189/330 (57.27%), Query Frame = 0
Query: 1 MIVKGISPNVVSYNNMILGHCRKGNINAACKVYKEMLDNGFARNMMDANILPTDITLGTI 60
M +KG +P+V+SY+ ++ G+CR G ++ K+ + M G + P G+I
Sbjct: 272 MELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKG---------LKPNSYIYGSI 331
Query: 61 IKGLCKAGRTSEGRDMFNKFVSQGFVPTCMAYKTIIDGFIKEGDINLALIVYTEMCEIGI 120
I LC+ + +E + F++ + QG +P + Y T+IDGF K GDI A + EM I
Sbjct: 332 IGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDI 391
Query: 121 SPSIVTYTSLIDGFCKSNNIDLALKLRNMMKRKGLEMDITAYGTLIDSFCKRRDMRNARE 180
+P ++TYT++I GFC+ ++ A KL + M KGLE D + LI+ +CK M++A
Sbjct: 392 TPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFR 451
Query: 181 LFNELLGAGLSPNVIIYNSMIARFKNLNNMEAAIDLHKNMVNEGIPCDLQTYTSLIDGLL 240
+ N ++ AG SPNV+ Y ++I ++++A +L M G+ ++ TY S+++GL
Sbjct: 452 VHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLC 511
Query: 241 KEGRLLYASDLYSEMLSKGILPDDHTHTVLITGLCNEGQLDNARKILEEMNGRNMTPSVL 300
K G + A L E + G+ D T+T L+ C G++D A++IL+EM G+ + P+++
Sbjct: 512 KSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIV 571
Query: 301 IYNTLIAGHFKEGNLQEAFRLHDEMLARGL 331
+N L+ G G L++ +L + MLA+G+
Sbjct: 572 TFNVLMNGFCLHGMLEDGEKLLNWMLAKGI 592
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022157865.1 | 5.1e-166 | 84.03 | pentatricopeptide repeat-containing protein At3g54980, mitochondrial-like [Momor... | [more] |
XP_022155459.1 | 5.6e-165 | 83.75 | pentatricopeptide repeat-containing protein At3g54980, mitochondrial isoform X1 ... | [more] |
XP_022947267.1 | 1.2e-162 | 81.79 | pentatricopeptide repeat-containing protein At3g54980, mitochondrial-like [Cucur... | [more] |
XP_038900535.1 | 1.5e-162 | 81.23 | pentatricopeptide repeat-containing protein At3g54980, mitochondrial-like [Benin... | [more] |
KAG6605302.1 | 4.5e-162 | 78.51 | Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a... | [more] |
Match Name | E-value | Identity | Description | |
O80958 | 3.1e-97 | 49.86 | Pentatricopeptide repeat-containing protein At2g39230, mitochondrial OS=Arabidop... | [more] |
Q9SV46 | 8.9e-97 | 48.73 | Pentatricopeptide repeat-containing protein At3g54980, mitochondrial OS=Arabidop... | [more] |
Q9FIX3 | 4.2e-54 | 31.22 | Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX... | [more] |
Q0WVK7 | 2.7e-53 | 33.33 | Pentatricopeptide repeat-containing protein At1g05670, mitochondrial OS=Arabidop... | [more] |
Q9SH26 | 6.7e-52 | 34.25 | Pentatricopeptide repeat-containing protein At1g63400 OS=Arabidopsis thaliana OX... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1DVN2 | 2.5e-166 | 84.03 | pentatricopeptide repeat-containing protein At3g54980, mitochondrial-like OS=Mom... | [more] |
A0A6J1DPE9 | 2.7e-165 | 83.75 | pentatricopeptide repeat-containing protein At3g54980, mitochondrial isoform X1 ... | [more] |
A0A6J1G5Y6 | 5.7e-163 | 81.79 | pentatricopeptide repeat-containing protein At3g54980, mitochondrial-like OS=Cuc... | [more] |
A0A6J1L247 | 1.4e-161 | 81.23 | pentatricopeptide repeat-containing protein At3g54980, mitochondrial-like OS=Cuc... | [more] |
A0A1S4E1T8 | 7.5e-155 | 77.31 | pentatricopeptide repeat-containing protein At3g54980, mitochondrial isoform X2 ... | [more] |
Match Name | E-value | Identity | Description | |
AT2G39230.1 | 2.2e-98 | 49.86 | LATERAL ORGAN JUNCTION | [more] |
AT3G54980.1 | 6.3e-98 | 48.73 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT5G39710.1 | 3.0e-55 | 31.22 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT1G05670.1 | 1.9e-54 | 33.33 | Pentatricopeptide repeat (PPR-like) superfamily protein | [more] |
AT1G05670.2 | 1.9e-54 | 33.33 | Pentatricopeptide repeat (PPR-like) superfamily protein | [more] |