Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTTGCTCCGCTTCAAAGCCCGCCGCCGCCCATCCAACCAGAAACTCCGAGTCTTTCTTTTCTGCTTCCCAATCTGCCGGTTCTTCGCCGGCGGTGGCGCGAGCTTTCTCTCTGCCGACGCCCCTCGTCCACCACCCGCCGGTCAAAAAGGGCGACACCCACCATCTCGTTTCCTCACTTCCACCACCTACGGCTCTCTCCTCCTCATCGACCGTCCGACGAAGCCTCATCTGGCCTCCCGGGATAGGACCGGCAAGCCCCACGGCCAACGCCGCCGGTTGAGGCCAAGACCTTGAAGCCCATGGAGTACTTCGAGCCATCTCTCTCTCCTGATTCTGTAATCAACACGTGGGAACTCATGGACGGTCTCGACGACGATGGCGATTTGGATTTCGATTCAGATTACAAATCGGCGAAACCCAGTCCGATTCCGGCCAAACCCACCTCGGAAAACGGGTTGACGGCTGTGTGA
mRNA sequence
ATGGGTTGCTCCGCTTCAAAGCCCGCCGCCGCCCATCCAACCAGAAACTCCGAGTCTTTCTTTTCTGCTTCCCAATCTGCCGGTTCTTCGCCGGCGGTGGCGCGAGCTTTCTCTCTGCCGACGCCCCTCGTCCACCACCCGCCGGACCGGCAAGCCCCACGGCCAACGCCGCCGGTTGAGGCCAAGACCTTGAAGCCCATGGAGTACTTCGAGCCATCTCTCTCTCCTGATTCTGTAATCAACACGTGGGAACTCATGGACGGTCTCGACGACGATGGCGATTTGGATTTCGATTCAGATTACAAATCGGCGAAACCCAGTCCGATTCCGGCCAAACCCACCTCGGAAAACGGGTTGACGGCTGTGTGA
Coding sequence (CDS)
ATGGGTTGCTCCGCTTCAAAGCCCGCCGCCGCCCATCCAACCAGAAACTCCGAGTCTTTCTTTTCTGCTTCCCAATCTGCCGGTTCTTCGCCGGCGGTGGCGCGAGCTTTCTCTCTGCCGACGCCCCTCGTCCACCACCCGCCGGACCGGCAAGCCCCACGGCCAACGCCGCCGGTTGAGGCCAAGACCTTGAAGCCCATGGAGTACTTCGAGCCATCTCTCTCTCCTGATTCTGTAATCAACACGTGGGAACTCATGGACGGTCTCGACGACGATGGCGATTTGGATTTCGATTCAGATTACAAATCGGCGAAACCCAGTCCGATTCCGGCCAAACCCACCTCGGAAAACGGGTTGACGGCTGTGTGA
Protein sequence
MGCSASKPAAAHPTRNSESFFSASQSAGSSPAVARAFSLPTPLVHHPPDRQAPRPTPPVEAKTLKPMEYFEPSLSPDSVINTWELMDGLDDDGDLDFDSDYKSAKPSPIPAKPTSENGLTAV
Homology
BLAST of Sgr011691 vs. NCBI nr
Match:
XP_022967816.1 (uncharacterized protein At3g28850-like [Cucurbita maxima])
HSP 1 Score: 125.9 bits (315), Expect = 2.3e-25
Identity = 87/149 (58.39%), Postives = 98/149 (65.77%), Query Frame = 0
Query: 1 MGCSASKPAAAHPT------RNSESFFSAS--QSAGSSPAVARAFSLPTPLVHHPPDRQ- 60
MGCSASKPAAA T RNSE F+S S QSAGSSPAV RAFSLPTPLVHHPP ++
Sbjct: 1 MGCSASKPAAATATTAARSSRNSEPFYSPSPLQSAGSSPAVGRAFSLPTPLVHHPPVKEG 60
Query: 61 --------------APRPTPP--VEAKTLKPMEYFEP-SLSPDSVINTWELMDGLDDDGD 119
+ RPT P AK +KP+++ + LSPDSVINTWELMDGLDDD D
Sbjct: 61 DTHHLVFLTSTTYGSDRPTNPGRAPAKAIKPVQFSDQIFLSPDSVINTWELMDGLDDD-D 120
BLAST of Sgr011691 vs. NCBI nr
Match:
XP_022932860.1 (uncharacterized protein At3g28850-like [Cucurbita moschata])
HSP 1 Score: 124.8 bits (312), Expect = 5.2e-25
Identity = 88/150 (58.67%), Postives = 100/150 (66.67%), Query Frame = 0
Query: 1 MGCSASKPA---AAHPTRNSESFFSAS--QSA-GSSPAVARAFSLPTPLVHHPPDRQ--- 60
MGCSASKPA AA +RNSE F+S S QSA GSSPAV RAFSLPTPLVHHPP ++
Sbjct: 1 MGCSASKPAAATAARSSRNSEPFYSPSPLQSAGGSSPAVGRAFSLPTPLVHHPPVKEGDT 60
Query: 61 ------------APRPTPP--VEAKTLKPMEYFEP-SLSPDSVINTWELMDGLDDDGDLD 120
+ RPT P AK LKP+++ + SLSPDSVINTWELMDGLDDD D+D
Sbjct: 61 HHLVFLTSTTYGSDRPTNPGRPPAKALKPVQFSDQISLSPDSVINTWELMDGLDDD-DVD 120
Query: 121 F-----DSDYKSAKPSPIPAKPTSENGLTA 122
F +S AKPS IPAKPTSENG +
Sbjct: 121 FSHNPINSSLIPAKPSSIPAKPTSENGFNS 149
BLAST of Sgr011691 vs. NCBI nr
Match:
KAG6603324.1 (hypothetical protein SDJN03_03933, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 124.8 bits (312), Expect = 5.2e-25
Identity = 88/150 (58.67%), Postives = 100/150 (66.67%), Query Frame = 0
Query: 1 MGCSASKPA---AAHPTRNSESFFSAS--QSA-GSSPAVARAFSLPTPLVHHPPDRQ--- 60
MGCSASKPA AA +RNSE F+S S QSA GSSPAV RAFSLPTPLVHHPP ++
Sbjct: 1 MGCSASKPAAATAARSSRNSEPFYSPSPLQSAGGSSPAVGRAFSLPTPLVHHPPVKEGDT 60
Query: 61 ------------APRPTPP--VEAKTLKPMEYFEP-SLSPDSVINTWELMDGLDDDGDLD 120
+ RPT P AK LKP+++ + SLSPDSVINTWELMDGLDDD D+D
Sbjct: 61 HHVVFLTSTTYGSDRPTNPGRPPAKALKPVQFSDQISLSPDSVINTWELMDGLDDD-DVD 120
Query: 121 F-----DSDYKSAKPSPIPAKPTSENGLTA 122
F +S AKPS IPAKPTSENG +
Sbjct: 121 FSHNPINSSLIPAKPSSIPAKPTSENGFNS 149
BLAST of Sgr011691 vs. NCBI nr
Match:
KAG7033597.1 (hypothetical protein SDJN02_03321, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 124.8 bits (312), Expect = 5.2e-25
Identity = 88/150 (58.67%), Postives = 100/150 (66.67%), Query Frame = 0
Query: 1 MGCSASKPA---AAHPTRNSESFFSAS--QSA-GSSPAVARAFSLPTPLVHHPPDRQ--- 60
MGCSASKPA AA +RNSE F+S S QSA GSSPAV RAFSLPTPLVHHPP ++
Sbjct: 1 MGCSASKPAAATAARSSRNSEPFYSPSPLQSAGGSSPAVGRAFSLPTPLVHHPPVKEGDT 60
Query: 61 ------------APRPTPP--VEAKTLKPMEYFEP-SLSPDSVINTWELMDGLDDDGDLD 120
+ RPT P AK LKP+++ + SLSPDSVINTWELMDGLDDD D+D
Sbjct: 61 HHLVFLTSTTYGSDRPTNPGRPPAKALKPVQFSDQISLSPDSVINTWELMDGLDDD-DVD 120
Query: 121 F-----DSDYKSAKPSPIPAKPTSENGLTA 122
F +S AKPS IPAKPTSENG +
Sbjct: 121 FSHNPINSSLIPAKPSSIPAKPTSENGFNS 149
BLAST of Sgr011691 vs. NCBI nr
Match:
XP_008455694.1 (PREDICTED: uncharacterized protein At3g28850 [Cucumis melo] >KAA0062761.1 Glutaredoxin [Cucumis melo var. makuwa])
HSP 1 Score: 116.7 bits (291), Expect = 1.4e-22
Identity = 81/152 (53.29%), Postives = 89/152 (58.55%), Query Frame = 0
Query: 1 MGCSASKP----AAAHPTRNSESFF---SASQSAGSSPAVARAFSLPTPLVHHPP----- 60
MGCSASKP AA TRNSESF+ SASQSAGSSPA+ RAFSLPTPLVHHPP
Sbjct: 1 MGCSASKPVAATAATRSTRNSESFYSPSSASQSAGSSPALGRAFSLPTPLVHHPPVNKGD 60
Query: 61 ------------------DR---QAPRPTPPVEAKTLKPMEYFEP-SLSPDSVINTWELM 119
DR + P PP KP+ + + SLSPDSVINTWELM
Sbjct: 61 THHLVSLTSTTYGSLLIIDRPTNSSRSPAPPFHVNAEKPIHFSDQISLSPDSVINTWELM 120
BLAST of Sgr011691 vs. ExPASy TrEMBL
Match:
A0A6J1HT50 (uncharacterized protein At3g28850-like OS=Cucurbita maxima OX=3661 GN=LOC111467220 PE=4 SV=1)
HSP 1 Score: 125.9 bits (315), Expect = 1.1e-25
Identity = 87/149 (58.39%), Postives = 98/149 (65.77%), Query Frame = 0
Query: 1 MGCSASKPAAAHPT------RNSESFFSAS--QSAGSSPAVARAFSLPTPLVHHPPDRQ- 60
MGCSASKPAAA T RNSE F+S S QSAGSSPAV RAFSLPTPLVHHPP ++
Sbjct: 1 MGCSASKPAAATATTAARSSRNSEPFYSPSPLQSAGSSPAVGRAFSLPTPLVHHPPVKEG 60
Query: 61 --------------APRPTPP--VEAKTLKPMEYFEP-SLSPDSVINTWELMDGLDDDGD 119
+ RPT P AK +KP+++ + LSPDSVINTWELMDGLDDD D
Sbjct: 61 DTHHLVFLTSTTYGSDRPTNPGRAPAKAIKPVQFSDQIFLSPDSVINTWELMDGLDDD-D 120
BLAST of Sgr011691 vs. ExPASy TrEMBL
Match:
A0A6J1F398 (uncharacterized protein At3g28850-like OS=Cucurbita moschata OX=3662 GN=LOC111439399 PE=4 SV=1)
HSP 1 Score: 124.8 bits (312), Expect = 2.5e-25
Identity = 88/150 (58.67%), Postives = 100/150 (66.67%), Query Frame = 0
Query: 1 MGCSASKPA---AAHPTRNSESFFSAS--QSA-GSSPAVARAFSLPTPLVHHPPDRQ--- 60
MGCSASKPA AA +RNSE F+S S QSA GSSPAV RAFSLPTPLVHHPP ++
Sbjct: 1 MGCSASKPAAATAARSSRNSEPFYSPSPLQSAGGSSPAVGRAFSLPTPLVHHPPVKEGDT 60
Query: 61 ------------APRPTPP--VEAKTLKPMEYFEP-SLSPDSVINTWELMDGLDDDGDLD 120
+ RPT P AK LKP+++ + SLSPDSVINTWELMDGLDDD D+D
Sbjct: 61 HHLVFLTSTTYGSDRPTNPGRPPAKALKPVQFSDQISLSPDSVINTWELMDGLDDD-DVD 120
Query: 121 F-----DSDYKSAKPSPIPAKPTSENGLTA 122
F +S AKPS IPAKPTSENG +
Sbjct: 121 FSHNPINSSLIPAKPSSIPAKPTSENGFNS 149
BLAST of Sgr011691 vs. ExPASy TrEMBL
Match:
A0A5A7VAR1 (Glutaredoxin OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold382G001020 PE=4 SV=1)
HSP 1 Score: 116.7 bits (291), Expect = 6.8e-23
Identity = 81/152 (53.29%), Postives = 89/152 (58.55%), Query Frame = 0
Query: 1 MGCSASKP----AAAHPTRNSESFF---SASQSAGSSPAVARAFSLPTPLVHHPP----- 60
MGCSASKP AA TRNSESF+ SASQSAGSSPA+ RAFSLPTPLVHHPP
Sbjct: 1 MGCSASKPVAATAATRSTRNSESFYSPSSASQSAGSSPALGRAFSLPTPLVHHPPVNKGD 60
Query: 61 ------------------DR---QAPRPTPPVEAKTLKPMEYFEP-SLSPDSVINTWELM 119
DR + P PP KP+ + + SLSPDSVINTWELM
Sbjct: 61 THHLVSLTSTTYGSLLIIDRPTNSSRSPAPPFHVNAEKPIHFSDQISLSPDSVINTWELM 120
BLAST of Sgr011691 vs. ExPASy TrEMBL
Match:
A0A1S3C2Q7 (uncharacterized protein At3g28850 OS=Cucumis melo OX=3656 GN=LOC103495807 PE=4 SV=1)
HSP 1 Score: 116.7 bits (291), Expect = 6.8e-23
Identity = 81/152 (53.29%), Postives = 89/152 (58.55%), Query Frame = 0
Query: 1 MGCSASKP----AAAHPTRNSESFF---SASQSAGSSPAVARAFSLPTPLVHHPP----- 60
MGCSASKP AA TRNSESF+ SASQSAGSSPA+ RAFSLPTPLVHHPP
Sbjct: 1 MGCSASKPVAATAATRSTRNSESFYSPSSASQSAGSSPALGRAFSLPTPLVHHPPVNKGD 60
Query: 61 ------------------DR---QAPRPTPPVEAKTLKPMEYFEP-SLSPDSVINTWELM 119
DR + P PP KP+ + + SLSPDSVINTWELM
Sbjct: 61 THHLVSLTSTTYGSLLIIDRPTNSSRSPAPPFHVNAEKPIHFSDQISLSPDSVINTWELM 120
BLAST of Sgr011691 vs. ExPASy TrEMBL
Match:
A0A6J1HP31 (uncharacterized protein At5g39865-like OS=Cucurbita maxima OX=3661 GN=LOC111466033 PE=4 SV=1)
HSP 1 Score: 114.4 bits (285), Expect = 3.4e-22
Identity = 85/163 (52.15%), Postives = 94/163 (57.67%), Query Frame = 0
Query: 1 MGCSASKPAAA-----HPTRNSESFF--SASQSAGSSPAVARAFSLPTPLVHHPPDRQA- 60
MGCSASKP AA P+RNSESF SAS SAGSSPAV RAFSLPTP+VHHPP ++
Sbjct: 1 MGCSASKPVAAAAATTRPSRNSESFSSPSASGSAGSSPAVGRAFSLPTPIVHHPPAKKGD 60
Query: 61 ------------------PRPT----------PPVEAKTLKPMEYFEP-SLSPDSVINTW 118
RPT V AK KP + + SLSPDSVINTW
Sbjct: 61 THHLVSLTSTTYGSLLLIDRPTNSQFPGRPAAGAVHAKAEKPTNFSDQISLSPDSVINTW 120
BLAST of Sgr011691 vs. TAIR 10
Match:
AT3G57070.1 (Glutaredoxin family protein )
HSP 1 Score: 62.8 bits (151), Expect = 2.2e-10
Identity = 58/155 (37.42%), Postives = 74/155 (47.74%), Query Frame = 0
Query: 1 MGCSASKPAAAHPTRNSESFFSAS----QSAGSSPAVARAFSLPTPLVHHPPDRQAP--- 60
MG SASK A++ + +S S FS S SSPAV RAFS PTPLVHHPP R+
Sbjct: 1 MGSSASKTASSVSSASSSSAFSPPPTKFSSDSSSPAVQRAFSFPTPLVHHPPARKGDSHH 60
Query: 61 -------------------RPTPPVEAKTLKPMEYFEPS----LSPDSVINTWELMDGLD 119
+ +TL + + +SPDSVINTWELMDGLD
Sbjct: 61 LVSLTSTSYGSLLLLDLDGSKNSSSDQQTLPRISISGKNTPDPVSPDSVINTWELMDGLD 120
BLAST of Sgr011691 vs. TAIR 10
Match:
AT2G41330.1 (Glutaredoxin family protein )
HSP 1 Score: 45.4 bits (106), Expect = 3.7e-05
Identity = 41/122 (33.61%), Postives = 54/122 (44.26%), Query Frame = 0
Query: 1 MGCSASKPAAAHPTRNSESFFSASQSAG---SSPAVARAFSLPTPLVHHPP--------- 60
MG S SK A++ + S ++ S +V +AF+ P P +HHPP
Sbjct: 1 MGSSVSKTASSASASSITSILNSPPETEFNIPSSSVPKAFTFPMPSIHHPPAKKGDTHHF 60
Query: 61 -------------DRQAPRPTPPVEAKTLKPM---EYFEPSLSPDSVINTWELMDGLDDD 95
D + P V K+ K M E S SPDSVINTWELM+ LDD+
Sbjct: 61 VSLTSTTYGSLVLDDRQTLPHISVSGKSNKKMPETEEARDSFSPDSVINTWELMNDLDDE 120
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022967816.1 | 2.3e-25 | 58.39 | uncharacterized protein At3g28850-like [Cucurbita maxima] | [more] |
XP_022932860.1 | 5.2e-25 | 58.67 | uncharacterized protein At3g28850-like [Cucurbita moschata] | [more] |
KAG6603324.1 | 5.2e-25 | 58.67 | hypothetical protein SDJN03_03933, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
KAG7033597.1 | 5.2e-25 | 58.67 | hypothetical protein SDJN02_03321, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
XP_008455694.1 | 1.4e-22 | 53.29 | PREDICTED: uncharacterized protein At3g28850 [Cucumis melo] >KAA0062761.1 Glutar... | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1HT50 | 1.1e-25 | 58.39 | uncharacterized protein At3g28850-like OS=Cucurbita maxima OX=3661 GN=LOC1114672... | [more] |
A0A6J1F398 | 2.5e-25 | 58.67 | uncharacterized protein At3g28850-like OS=Cucurbita moschata OX=3662 GN=LOC11143... | [more] |
A0A5A7VAR1 | 6.8e-23 | 53.29 | Glutaredoxin OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold382G001020 ... | [more] |
A0A1S3C2Q7 | 6.8e-23 | 53.29 | uncharacterized protein At3g28850 OS=Cucumis melo OX=3656 GN=LOC103495807 PE=4 S... | [more] |
A0A6J1HP31 | 3.4e-22 | 52.15 | uncharacterized protein At5g39865-like OS=Cucurbita maxima OX=3661 GN=LOC1114660... | [more] |