Sgr008701 (gene) Monk fruit (Qingpiguo) v1

Overview


Name	Sgr008701
Type	gene
Organism	Siraitia grosvenorii (Monk fruit (Qingpiguo) v1)
Description	structure-specific endonuclease subunit SLX1
Location	tig00007125: 74161 .. 84849 (+)
RNA-Seq Expression	Sgr008701
Synteny	Sgr008701

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGAGTGCTTTCTCAGACATTTCGTTGCCATAAACGCCCAATTGCAAATCCAGACGTTCCGAAACCTTCTTCTTCGTCAACCGAGGATCCAGTTGCTGTGACATTGAGCGTCAAATCGAAGCCGAAGCCGTGGTGTGTGTATCTCATCATCTCCTCCAATTTCCCCATCAAAACCTATGTTGGGGTCACCCTCAACTTCGCTCGCCGGTTTGTCGATTTCTTCTCTTGGGGTTCTTGTTTAAAGCACAGATTTCATGAATTGATATTGAAAATTTATCTGGGTCATGTTCAATTAATCGTTTTCAAGCTTTTTTTTACCCATTTGGCTTCGATCTGGGTAAACTAGTGCAATTTCTTTGAAGAAACATGCTCGAGTTATGTTGCTTGTATGGAGATAACCTCGTATCAAGTCAATTTGGTGCAAGAAGATGAGCTTTATCATGAAAAAAAATCTTGGGTTTAGTTTTTTATTGACAGTTTTCAAGTTGAACTGCTTAATTGATCAGTTGAGGTATTGGTTTTTTATGTTTAGCAAGACGATTTAAAGTCAGGGAGTGTTTTGGGATCATCTACAAACTGTTACGGTGTTTTAGTAGTTATGAGAGGTTAGTGGAGGGAAGAAATGCTTCACCAAGTGTGAATATGCTTCTGACTGAAAAGCAGTAACCATTTCTGCAAAATGTTGGTATTGTTCTAGATGTTTCATAGTTATTTATAAAGAGATGCACTTCAAATGCTTTTCCAGAACCCAATCTTCTAGCCAATTCCTTTTTCCGAAATTTGCAACTACTGATAAGTGATAATTACAGATATTGGTTGATATGAGCCCCCTGGCTCTGGGTTCCGTTCCTTGGCACTCATGTGATGCCTACATTGATTTACATGTTCTTTATGCATAAGAGGTATTTAAATATTTCTTATGGTCATAATGTTATATTCTTGTGCAGTTTGAAACAACATAATGGTGAAATAGAAGGAGGTGCAAAAGCAACTCGTGCAGGACGACCCTGGATCTGTGCGTGCACAATTCATGGTTTTAAAGACCAAAGTCAAGGTATCCATTTAAAATACAAGTTTTAGGATCATGCACCAGTTGAGTTCCATATTTCAAGGGCATTGCTTGGCTATTTGTGATAGTAGTCCTCTAGACACACTGCGTTGCTTTTCCCATGGAGACGTCATATTTCCTTGATGGCATATTCTGCATATATGAATGACTATGATTTTTTTTTTTTTTTTGGAAATTTTCCTCTTCATTACCATAAAGTAGGGTTCCTGTAGTTGATCAATTTGGAAGTTGCTGCATATTATGATTCAGCTTTTCTGGAAGTTGTTGTAGTTGCTTTGTTGTGGTAGCGATCGTGCTATATTAGATGACAACAGTTAGATGTGACAACAGTCAGTTTTTCTGGCATTATGAGAACTATTCCCCTGAGAAACTATCTTTATTCATTGCTCCTCTTTGACCTTTTCTTAACGATGCATACTTTGATGGGAGCTTTCATAGATGTCTAGGTCTGAATTGAGATGAAGCCTTATATGCGTTCGAACTTTTAAAATACTGTACTGGGAGGAGGGGAACTTCATGGCACAGCACCTTACACTTTTAAACTCATTTACAAATGCTGAAAATTTCCTCTTTGATAAGATACAAAATCGGTTTACTCAAGCCCAAAGCGATACCCCTGGTGAGTGGATTAGTAAGTACTGTAGAACCTGTCCTAGAAGAGCCATGAAGGATACGTGCTAAACATCTGAAAATCTTCGGTCCTTTCAATTGAAGAAGTGATGGGGCCAAAGAAAGATAATGTAGTGTAAACAGTGCTCGAGATTTTGTACTCCAAGAGGAGGGGGGGGGGGGGGGATAGGAAAAAAACTCTATAGCAGAACACCCTATAGTTTTAATTCATAAATTAAAGGCTGCAAGTTCATTCAAGGTTGGAGATGATACTCCGGTGAGTAGATCAGGAAGTACCCTAAAACCTATGGCAGAATAGGCTAAGGACACATTCTAGTTCTGAAATTACCTGGCCCCCTTGCAATTGAAGAGCTGATGAGACCAAAAATAAGTAACCCAAAATATAGTCTGCAACACTTGAGATTTTGTACTCTTGTGGGCGTGTTCACTGGAAGGCTGAATACCCTAGCTACACCTAACATGTGAAATGGTTGCATAAGGATGTTGTATTTAGCTTAGAATACAATCATGAAAGTTGAAACTTGAAATTACTTGAGCTTCCTTGAGGCATATTGTTAGAAAAGCTTCTTCCTTGACCTATTGGAAGACCAAGAAAATAGCAGTAGCAGTTGCAAAAAAAGCTATATGCACCAGCAATCCAGAGATGCATACCCACGTGGAAACTATGTTCCCACACTCGATCCGTGTATCACACTGCACCCACTAAGAAGTGTAAAATAATCCGCTCATGAAGACCACCATTGTATAGCCACTTATCAGTCGAAGCAGCTTCCCATATCTGGTAAGAATGCAACCCTATAGCAAAAGTGGGGATAATGACACAAAATAATTTTGTTTCTATAAAGTAGAAATCTAGAAACAGGTTCATGAGTCTCATCACTATTTGGTAAAGGAGCAACAATGAAGGCAATAATAAATACAGAAGTTGCAGTCAGATTATAGTGGATTTTTTTTCTTTCTGTTTGGGAAAGGAGCTGGTAGCTGATGGGTATCGTATTCACATAAACAGCAAGGAAACAACAATGGAGCTGAGAGCTCCGTTACAAGCCTGGCCAATACCGAGAGGGCCGGCGTCTCTCCCACTAGTTCCTAACCCAAACGCTGCCTGCCTCCTACCACCCCCCCCCCACGCCTATATGTCCTGCCCCGTACGCTATTCTAACTAACTAACATACTATTTCCTTTTCTACCCCTCCTTTTATACTTATTCACTATTGGGGGCCTAACATCACCCCCCGGTCCGAAAGACACCTTGTCCTCAAGGTGGAAATCTGGAAATTGCCGACGAATCGTCTCGAGGTTTTCCCACGTTGCCTCTGAGGCGGGTAATGTTTTCCACTGAATGAGGACTTCCCAGGAGCCCGAATCCGCATTGCGTCTAACGCCCAACACTGATTCTGGTTCGAGGATCCACTCCGAGTCGGTACCCAGCGTCGGTAGTGAAGTCTGAGTTACAATTCCGTCACCTACGACCCTTTTTAACTGAGATACGTGGAAGACAGGATGAATGGCTGAGCTGGCTGGCAACTCGAGTTTGTAGGCCACTTTACCTATTCGGTCCAGTATTTGAAATGGCCCAAAAAACTTAGGGGATAGCTTCTCATTTTTCCTTTGGCTCACTGTTTTCTGGCGGTAGGGCCGAACTTTCAGATAAACAAAGTCCCCCACCTCGAAAGACTCCTCTCGTCGTCGCTTGTCCGCATTTCTTTTCATTTGAGATTGGGCTGCAGCCAGTTTATCCTTAAGGGTCAAGAGAGCTTGATCTCTCTCTACCAACTGTTGATCTAGAGTGGCATTTGAAGTCTTTTGTTGGCCATAGAAAACCAAGGGTGGCGGTGGTCGACCATATATTGCCTGGAATGGAGTCGTTCCAATGGACACGTGGAATGTGGTATTGTACCAATACTCCGCCCATCCTAGCCAATCGTGCCACTGTTTCGGTTTCGTGCTGCAGAAACAGCGCAGGTAAGCCTCTAGGCAGCGGTTGACCACTTCCGATTGCCCATCTGTCTGTGGGTGGTAAGCAGTACTTCTGCGGAGATGAGTACCTTGTAAGCGGAACAACTCAGTCCAGAAATTGCTCAAGAAAACCTTATCCCTATCTGATATTATGGATTTCGGAAATCCATGCAGCTTGACTACATTTTGAATAAACGCTTCTGCAACTGACTTAGCTGTGAAAGGATGCCGGAGAGCCACGAAATGAGCATACTTGCTTAGTCTGTCGACCACCACCAGGACGGTGTCGTATCCACTCGATTTGGGAAGGGCCTCCACAAAGTCCATGGTTATATCGTTCCACACTTGGTCTGGAATAGGGAGAGGTTGCAGGAAGCCGGCCGGGGAAAGCGTTTGACTCTTGTTTTGCTGGCAGATGGAGCAGCTATCCACATATTTCTTCACATCTCCCTTCATACCCAGCCAATAAATTTCACTAGCTATCCTTTTGTATGTTCGCAGAAACCCCGAATGCCCTCCCAAGGCAGAATCGTGGAAAGCATGAAGAATTGAGGGAATCAGGGAAGAATTTCGGGGTAGCGCTAAACGGTTTTTGTACAGCAAGGCACCCCGATGAAGGGAGAATTTCGGGCGGCTTTCCGGGTCGGTGAGAAGCTCTTTCTTTATAGCTGATAGGTGGGTGTCGTTGTCCACTTGCTCATTCACCATCCCCGTGTCAATCAATGAAGGAACGGACAGCGCCTTAAATTCTCCCACTGGTGGACAACGAGAAAGTGCATCAGCCGCTCTATTTTCCAGGCCGGGTTTGTATTGGATTTCCATATCGTACCCCAACAACTTAGCCACCCATTTTTGATATTCCGGTTGAATTACCCGCTGTTCTAGTAGATGCTTCAGCGCCCGTTGATCCGTTCGAACGATGAAACGCCGCCCCAAGATGTAATGACGCCATTTCTGCACTGCTAGTGTAACAGCCATCAATTCTCGCTCATAAATTGGTTTCAAGCGGGCTCGATCCGACAGAGTCTGGCTAAAATAAGCAATTGGTCTTTGATGCTGCATCAGCACAGCGCCTAGACCGGTACCTGAGGCGTCTGTCTCTATCACGAAGGGAACTGAAAAATCTGGGAGTGCCAACACCGGAAGCGACACCATCGCGAGTTTCAGTCTCTCAAAAGCCTTGTCGGCCTCAGAGTCCCAGTGAAACGCATCCTTCCGAAGCTGTTGGGTGAGAGGGGCAGCAATTGTTCCGTAATTTTCCACAAACCGGCGATAGTATCCCGTCAATCCCAAGAAACCCCGTAACTCCTTGAGTGTTTTAGGGACCGGCCATTGCATCATCGCTTGAACCTTGGAAGGGTCGGCTTCAACTCCCCTTGTTGAAATCCAGTGACCCAAGTACTCTACCCGTCGTTGAGCGAAGTGGCATTTCCTCATATTTACGCACAGTGAATTCTCTTTCAGCACCCCAAACACCGTGGCGAGGTGATTCACGTGAGAGGCTAAATTGGAGCTGTAAACCAGGATGTCATCAAAAAAGACTAAAACAAATTTACGGAGGTAAGGACGAAACACCTGATTCATCAATGCTTGGAATGTTGCCGGGGCATTGGTTAACCCGAACGGCATGACCATGAACTCATAATGCCCTTCGTGAGTCCTGAAGGCCGTCTTAGGAATATCAGGTTCATGTACTCGAATTTGATGGTAACCGGACTTGAGGTCCAGTTTCGAAAATATTGTAGCACCATGAAGCTCGTCCAGCAGCTCTTCTATGACTGGTATGGGAAAACGATCCGGTATTGTGGATGCGTTGAGGGCTCGGTAATCAACACAGAAACGCCAGCTTCCGTCTTTCTTCCTTACCAATAACACGGGACTAGAGTAAGGACTCGCGCTCGGGCGAATGATCTCCGCCGCCAACATCTCTTGGATTAATTTTTCCATCTCCCCTTTTTGGGCGTGTGGGTAGCGATATGGTCTTACCGAAATGGGAGCGGTCCCTTCTTGCAATTGGATTCGATGATCTATTGCTCTTGAGGGAGGGAGGGTCGTGGGCATGTCGAAAACTGCTGTAAATTCCTTCAACAGAGCACTGATCTCTACCGGAATTCCCTCTGTCGGGTTACCCATCCCTCTGATTTCTTCGTCTGTAGACGAGAGCTGTCGTAATTCGATCAAATAGCCCTGGTCACGATCATCCCACGTTTTGATCAATGTGCGCAACGATGCCCCCGAACGCGTGAGTCCCGGGTCGCCCCTTAACGTTACTCTTTCCCTTCCCAACTCAAACTTCATTTCCAGCGAGTTCCAGTTTACTTCCATTTTTCCCAGGCTTCGTAGCCACTGCATGCCCAATATAACATCGATGCTACCCAAATCCAACGGCAAAAAATCGGCCACAATGTTCAAACCTTGCAAGGACAGAGAGACCCCTTTACAAATACCCTTTCCCTTGACGGCCGCTCCCGTTCCCACGACTACTCCATAGTTGATTGTATCCGATGCGGTCAGGCCCAGCTTCTCCACTATTTTCGGTGCTATGAAGTTGTGGGTCGCCCCACAATCTATGAGAACGAGGACCTCTTGCTCTTGGATGGTACCCGTGAGCTTCATAGTGCCCGGCGCGGTGAGTCCGACTACCGAGTTCAGCGAAAGCTCGACGACCTCCCCTACTGCTGTCTCGGTTTGGTCGGTTTCCTCCATCTCCCTTCCCTCTTCGCTTTCTTCTTCCCCGTCTTGAACAAGGAGCACCTTCAGTTCTTTCTTTTTACATCTATGCCCAGGGGAAAACTTCTCATCACATTTAAAGCAGAGACCTCTATCCTTTCGATGCTGCAGTTCTGCCTCTGACAGACGTTTGTAGGGAGATTCCCGCCGTATCATGGAGGTGGTAGGGGTTCGCTCGCTCAGAGTCACTGTGCGGGTCAGCGCCGGGTCAAGGGCCCTTCCCGCTCCCACCTGCTTTGGACCGCTGAAAATGGTTTTCGTCGCGCGGCCCTGACCCGTGTCTTGCACGAGTTTCCTTACCTGTTCCCGGTCTTCTACCAACTGGGCAACCCTCATCGTTTCCACCAGCCCATTGGGCTTCATACATCTAACTTCAGCTCTGACTGTGGCCTCTAGCCCATTAATGAATGTGCTTAACAACACCTCCTCCGTCAAGTGAGGTAACGGTGCCGCCAGCAGCTCGAAGTTCTTCCGATAGTCGGCCACTGTGCTCGCTTGCTTTACGGCCAAGAACCTGTCACAAAGAGTTCCGTTCAGCGATGGCCGAAAACGATCCAGTAGTTGTTCCTTGAGGTCCTTCCAATCTCTAAACCCCGCTCTCGCCTCTATCCAACGAAACCAAGCTAAGGCTTCTGCCTCAAAACTTACCACCGACACGGTAAGCTTCTCCGAATCTGTGAGATGATGGATTCCGAAGAAACGTTCCGCCCGAAAGAGCCACCCATCCGGATCGTCACCTGAGAAAATGGGCATCTCCACCTTCTTGAACTTGCCTCTGTCCCACAACTCTCCTTCATCGGCCTGGGTTCGCCTATCGGTTTCCCGATTGTCTGATGCTTCCCCATTTGGACGTCCTTTCCTTGTCGCTTCTCCCCTCGGGCCGGGGTGGAGTGTTCCTCCTCTGAACCGATTCCTCCCCTTCGAGGTCTGTCTGTCTTCTGCGCGTTCCTGATGCCTGTTCATACAATATTGCAGACATCGTTTTCTGAGTGTCTTCGAGAGAGGTGATGAGCCTAGCGACGTTTTGCGAAACATGTTCCACCGACCGCTCAATTCCAGGTAATCTTTCTAACTCATTCTTAAACTCTCTCATCTCCTTCTCCACCATATCTAACCTCTCTTCCAACTTCTTCGCCATACCCTTCCTCTTCCCCAGCTCGAACGTGCTCTGATACCAGGATGATGGGTATCGTATTCACATAAACAGCAAGGAAACAACAATGGAGCTGAGAGCTCCGTTACAAGCCTGGCCAATACCGAGAGGGCCGGCGTCTCTCCCACTAGTTCCTAACCCAAACGCTGCCTGCCTCCTACCACCCCCCCCCCACGCCTATATGTCCTGCCCCGTACGCTATTCTAACTAACTAACATACTATTTCCTTTTCTACCCCTCCTTTTATACTTATTCACTATTGGGGGCCTAACAGTAGCTTCTGCAGCTGAAAAGGTCAATGACAGTTTCAGGGCCCCATAATTCATGCCCCAAATTTCTGTAATACATCAGCCATGATATTTGTGATTTTCATGGCTGATACAATGCAACTATAAGGATAAGAAGTACTGTTGTTTGGATTGACTGATTGATGCTAAGAAACAAACTTATTCAATATTTCATGCAACTTTCATATTGCAACTGGCATTCCTCTTGCATATCGATTTGGTTTTAATCAAATCTCAAATAATCTGCATGTCAAGGCTCATACCTTTCAAAGGGGCCTTCCATCTTTAGTGTATTTAGATTTCTTTTCTTATAAATGGAACAAGCTGAAACTTTGTAGATCACCATATATAATATCCCATTAATCAATCACTTGGCTTTAAATTGGAGGTAGTTGGAGATGCATTTATTTCTAATGAGGCAAATGAACCAACTTGTTGTCATCATCTGGACAATTTTTGGTAGGCCAATCTGTACTGCACTACAAAATTCGTCGGGTTTCACCTTGTTTTATTTACCTTAAGTTTCCTGCCTGCATTACCCAAGGAATTTGGTACTTGTGTCTGCTGATTGTATGTTATGTACGGCGTGCTGAATAACTCTAGTGAAGATCCTGTTTCTGGTTGCATTTATACTTTATGGTGTTGTTGCTATGAACATCCTTCAAATTCATGCTCCTTAAAAACCGGGCGAACTCAACCGGGTGATCATATTAAAAACCCTTTGGACCACCAACCCTATTATCAAATGTGTCTCGAGTTTTTCGACTGGTGAATGCTCTGTAAAATCAGTCCCACCATAGCTGATGCTGTATTTATACTCTGGATGCAGCTTGTGAGTTTGAATCAAAATGGAAAGAAGTTTCAAGGAAATTGCCCCATCAGAGGAAGAAGAATGATATGGGAAAGCAGGTGGATGATCAGACATTAAGATTGCTCAAGCACAGGGAAGGAGCTCTGGAAAAAGTGAAGTGTCTGTTTGATTGCAGTCAATTTGAGTTTGATTGGCAATTGGATCCTTTCTGATGCTTTACTTGCTTGGGACTTTGGAAATATTTATCTTTTTATCTTCAATTCTATGAAGTGAAATTAATAAGAAAAGTTGTTTATAAGATAAGCATCCTATGTTTAGAACTGTGTTAAAAGTAGTCGTTTTCAATGTTTTAATTCAAAAGCAATTTTAAGGTTTGAGTGAAGGAGATAATATTTGAAAGCTCCTAGAAAACGATAGGCTTTCAAACAATAAAATATAATGAATTGATTTCAAACCTTTGTCTATTATAGACCATCCGCTATTGATCAGGTAAATGAATGATAGACCATCCACTACTGATAAGGTAAATGAATGAAAGACGCATCTATATTTAGACTTTGTTAAATAAGTTTTATTTACAAATTTAAATACTAAAATAAAATATTTAAAGGTTCAGAGGCTAAAATAAAAGTTATATCGAGGTGAAGCGAATCTTTAATATTGTAAAGGAGTCTGCTCATAAAAAATAAAAATTTTAAATATCACATCATTGTTCATTTATTCAATTTTTAAATATATTAAGTTTTAAATAGTCTAAAGAAAGTTGTCTATTCTCTCAAATATAATGTCAAACCTAAGTTTTTATGGCCAATCTAAGCGTAATTTTAGTATTTAGATATCTATACCTCTCTTTTATAGATTGTAGATTTCTAAAAGAAATGTTTAATATGCTATATTCATAAGTTAGACTTCTTAACCAAAGACTCTATTCTCACAAAATCACATCCTAAGTTTTTATGGCCAATCTAAGCGTAATTTTAGTATTTAGATATCTATACCTCTCTTTTATAGATCGTAGATTTCTAAAAGAAATGTTTAATATGCTATATTCATAAGTAGACTTCTTAACCAAAGACTCTATTCTCACAAAATCACATCCTTACGTCTCAAACTATTCCTCAAAAGTTCCACCCTCGTCACAACTATTCATTTAGATATAACTCTTCATTGTGAGAAATTTTATCGTTTTTCCTCTATTGTTTGTGGATATCTGTCTTTGACTTGATGGTCAAAGTCATATCAATAATCATCATATTTAATCTTCAAGTAACTTCTCTATTTTACTCATGTCCATTCCCCAACAATAAATTGTCAACAAGTACAACAACCCATTACAATTTAACAATAAGAAATTAAAATTTTCAAAAAACGGTTACCTTTTCAAATTTCTTTCATTCGAATGTTGAATTCTGGTAACTCCACATTCCTTCATGAATCATGATACAATTTATTTATTTATTATAATTTTTTTTTTTTTGGGAACTTTTCTTGTAAATAAATAAATAATTATTTGACTTGAAATGAGATCAACGGCCCGATCAGGTCACCAGTCACACTCTTCACGTACGCGCCTAGAGCCGCGTACTCCTCAAACATTCTTACGTCCGCTTTGAACCTCAGAAACTGTGGAAAAAACAGCCAAAAGCTGGTGATCATCACGAACCCGATCGTCAACGGCGTCGATATTATCGGCGGCAGCCGGAACCTACCTCCGACCGCCCTCTTCACCACCATCTCCGCCGGCAAACACAGCCCATGTAGCAGAAAGAAGCACGTCACTTCCCAAGTCGGCGCCATTCTTCCCATGTAGAAGAATATCAGCTCGTGCATCAGGCCGGAGACGACAAACGTTGCCGCCACCGCCACCAGGGACGCCCGTTTTTTCCCCACGACGGCTGCCGCCAAGCTCCGGGATGGCTCGTAGACGGTCAGCCGGAGGATTTTGGTGGCCATCAGGTTCCATCTCCGGCCCCAGAAGTCCTGTAATGAAGTGGATAGGTAGGGCTCGTCGAAGTAGGGCTGAAGCTCCACCTCAAGCGCCGCCCTAG

mRNA sequence

ATGAGAGTGCTTTCTCAGACATTTCGTTGCCATAAACGCCCAATTGCAAATCCAGACGTTCCGAAACCTTCTTCTTCGTCAACCGAGGATCCAGTTGCTGTGACATTGAGCGTCAAATCGAAGCCGAAGCCGTGGTGTGTGTATCTCATCATCTCCTCCAATTTCCCCATCAAAACCTATGTTGGGGTCACCCTCAACTTCGCTCGCCGTTTGAAACAACATAATGGTGAAATAGAAGGAGGTGCAAAAGCAACTCGTGCAGGACGACCCTGGATCTGTGCGTGCACAATTCATGGTTTTAAAGACCAAAGTCAAGCTTGTGAGTTTGAATCAAAATGGAAAGAAGTTTCAAGGAAATTGCCCCATCAGAGGAAGAAGAATGATATGGGAAAGCAGGTGGATGATCAGACATTAAGATTGCTCAAGCACAGGGAAGGAGCTCTGGAAAAAGTGAAGTCACCAGTCACACTCTTCACGTACGCGCCTAGAGCCGCGTACTCCTCAAACATTCTTACGTCCGCTTTGAACCTCAGAAACTGTGGAAAAAACAGCCAAAAGCTGGTGATCATCACGAACCCGATCGTCAACGGCGTCGATATTATCGGCGGCAGCCGGAACCTACCTCCGACCGCCCTCTTCACCACCATCTCCGCCGGCAAACACAGCCCATGCCGGAGACGACAAACGTTGCCGCCACCGCCACCAGGGACGCCCGTTTTTTCCCCACGACGGCTGCCGCCAAGCTCCGGGATGGCTCGTAGACGGTCAGCCGGAGGATTTTGGTGGCCATCAGGTTCCATCTCCGGCCCCAGAAGTCCTGTAATGAAGTGGATAGGTAGGGCTCGTCGAAGTAGGGCTGAAGCTCCACCTCAAGCGCCGCCCTAG

Coding sequence (CDS)

ATGAGAGTGCTTTCTCAGACATTTCGTTGCCATAAACGCCCAATTGCAAATCCAGACGTTCCGAAACCTTCTTCTTCGTCAACCGAGGATCCAGTTGCTGTGACATTGAGCGTCAAATCGAAGCCGAAGCCGTGGTGTGTGTATCTCATCATCTCCTCCAATTTCCCCATCAAAACCTATGTTGGGGTCACCCTCAACTTCGCTCGCCGTTTGAAACAACATAATGGTGAAATAGAAGGAGGTGCAAAAGCAACTCGTGCAGGACGACCCTGGATCTGTGCGTGCACAATTCATGGTTTTAAAGACCAAAGTCAAGCTTGTGAGTTTGAATCAAAATGGAAAGAAGTTTCAAGGAAATTGCCCCATCAGAGGAAGAAGAATGATATGGGAAAGCAGGTGGATGATCAGACATTAAGATTGCTCAAGCACAGGGAAGGAGCTCTGGAAAAAGTGAAGTCACCAGTCACACTCTTCACGTACGCGCCTAGAGCCGCGTACTCCTCAAACATTCTTACGTCCGCTTTGAACCTCAGAAACTGTGGAAAAAACAGCCAAAAGCTGGTGATCATCACGAACCCGATCGTCAACGGCGTCGATATTATCGGCGGCAGCCGGAACCTACCTCCGACCGCCCTCTTCACCACCATCTCCGCCGGCAAACACAGCCCATGCCGGAGACGACAAACGTTGCCGCCACCGCCACCAGGGACGCCCGTTTTTTCCCCACGACGGCTGCCGCCAAGCTCCGGGATGGCTCGTAGACGGTCAGCCGGAGGATTTTGGTGGCCATCAGGTTCCATCTCCGGCCCCAGAAGTCCTGTAATGAAGTGGATAGGTAGGGCTCGTCGAAGTAGGGCTGAAGCTCCACCTCAAGCGCCGCCCTAG

Protein sequence

MRVLSQTFRCHKRPIANPDVPKPSSSSTEDPVAVTLSVKSKPKPWCVYLIISSNFPIKTYVGVTLNFARRLKQHNGEIEGGAKATRAGRPWICACTIHGFKDQSQACEFESKWKEVSRKLPHQRKKNDMGKQVDDQTLRLLKHREGALEKVKSPVTLFTYAPRAAYSSNILTSALNLRNCGKNSQKLVIITNPIVNGVDIIGGSRNLPPTALFTTISAGKHSPCRRRQTLPPPPPGTPVFSPRRLPPSSGMARRRSAGGFWWPSGSISGPRSPVMKWIGRARRSRAEAPPQAPP

Homology

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BLAST of Sgr008701 vs. NCBI nr
Match: XP_022152567.1 (structure-specific endonuclease subunit SLX1 [Momordica charantia])

HSP 1 Score: 240.4 bits (612), Expect = 2.0e-59
Identity = 121/155 (78.06%), Postives = 135/155 (87.10%), Query Frame = 0


Query: 1   MRVLSQTFRCHKRPIANPDVPKP-SSSSTEDPVAVTLSVKS--KPKPWCVYLIISSNFPI 60
           MR+LS TFRCHK PI+N   PKP SSSST+DP A TLS +S  KPKPWCVYLIISSN P 
Sbjct: 33  MRLLSHTFRCHKSPISN---PKPSSSSSTKDPSAATLSFESQLKPKPWCVYLIISSNSPF 92

Query: 61  KTYVGVTLNFARRLKQHNGEIEGGAKATRAGRPWICACTIHGFKDQSQACEFESKWKEVS 120
           KTYVGVTLNF+RRLKQHNGEI+GGAKATRAGRPW+CAC IHGFKDQSQACEFESKWKEVS
Sbjct: 93  KTYVGVTLNFSRRLKQHNGEIKGGAKATRAGRPWVCACMIHGFKDQSQACEFESKWKEVS 152

Query: 121 RKLPHQRKKNDMGKQVDDQTLRLLKHREGALEKVK 153
           RK+ H+RKK+D  +Q D+Q LRLLK+R+ ALEKVK
Sbjct: 153 RKIAHKRKKDDEEEQADEQKLRLLKNRQRALEKVK 184

[Close]

BLAST of Sgr008701 vs. NCBI nr
Match: XP_008461838.1 (PREDICTED: structure-specific endonuclease subunit slx1 [Cucumis melo] >XP_008461839.1 PREDICTED: structure-specific endonuclease subunit slx1 [Cucumis melo])

HSP 1 Score: 240.0 bits (611), Expect = 2.7e-59
Identity = 114/152 (75.00%), Postives = 134/152 (88.16%), Query Frame = 0


Query: 1   MRVLSQTFRCHKRPIANPDVPKPSSSSTEDPVAVTLSVKSKPKPWCVYLIISSNFPIKTY 60
           MR+LSQTFRC K PI+NP +PK SSSST+ P  +    + KPK WCVYLIISSN PIKTY
Sbjct: 1   MRLLSQTFRCQKPPISNPRLPKSSSSSTKGPTLIVKLEEPKPKQWCVYLIISSNSPIKTY 60

Query: 61  VGVTLNFARRLKQHNGEIEGGAKATRAGRPWICACTIHGFKDQSQACEFESKWKEVSRKL 120
           VGVTL+F RRLKQHNGEI+GGAKAT+AGRPWICACTIHGFKDQSQACEFESKWK+VSRK+
Sbjct: 61  VGVTLDFDRRLKQHNGEIKGGAKATQAGRPWICACTIHGFKDQSQACEFESKWKKVSRKI 120

Query: 121 PHQRKKNDMGKQVDDQTLRLLKHREGALEKVK 153
            +++K++D+GKQ+D+QTLRLLKHR+ AL KVK
Sbjct: 121 SYEKKEDDVGKQLDNQTLRLLKHRQRALGKVK 152

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BLAST of Sgr008701 vs. NCBI nr
Match: XP_004151512.1 (structure-specific endonuclease subunit SLX1 [Cucumis sativus] >KGN58557.1 hypothetical protein Csa_001754 [Cucumis sativus])

HSP 1 Score: 236.5 bits (602), Expect = 2.9e-58
Identity = 119/156 (76.28%), Postives = 135/156 (86.54%), Query Frame = 0


Query: 1   MRVLSQTFRCHKRPIANPDVPKPSSSSTEDPVAVTLSVKSKPKP----WCVYLIISSNFP 60
           MR+LS TFRC K PI+NP + K SSSS++DP   TL VKS+PKP    WCVYLIISSN P
Sbjct: 1   MRLLSHTFRCVKPPISNPPLSKSSSSSSKDP---TLIVKSEPKPKLKQWCVYLIISSNSP 60

Query: 61  IKTYVGVTLNFARRLKQHNGEIEGGAKATRAGRPWICACTIHGFKDQSQACEFESKWKEV 120
           IKTYVGVTL+F RRLKQHNGEI+GGAKATRAGRPWICACTIHGFKDQSQACEFESKWK+V
Sbjct: 61  IKTYVGVTLDFDRRLKQHNGEIKGGAKATRAGRPWICACTIHGFKDQSQACEFESKWKKV 120

Query: 121 SRKLPHQRKKNDMGKQVDDQTLRLLKHREGALEKVK 153
           SRK+ +++K+ D+GK +DDQTLRLLKHRE AL KVK
Sbjct: 121 SRKISYEKKEEDVGKLLDDQTLRLLKHRERALGKVK 153

[Close]

BLAST of Sgr008701 vs. NCBI nr
Match: XP_038903984.1 (structure-specific endonuclease subunit slx1 isoform X1 [Benincasa hispida])

HSP 1 Score: 230.7 bits (587), Expect = 1.6e-56
Identity = 113/152 (74.34%), Postives = 130/152 (85.53%), Query Frame = 0


Query: 1   MRVLSQTFRCHKRPIANPDVPKPSSSSTEDPVAVTLSVKSKPKPWCVYLIISSNFPIKTY 60
           MR+LSQTFR  K   +N  + K SSSST+DP+ +  S + KPK WCVYLIISSN PIKTY
Sbjct: 1   MRLLSQTFRTQKPSNSNSQLSKSSSSSTKDPILIVKS-EPKPKQWCVYLIISSNSPIKTY 60

Query: 61  VGVTLNFARRLKQHNGEIEGGAKATRAGRPWICACTIHGFKDQSQACEFESKWKEVSRKL 120
           VGVTL+F RRLKQHNGEI+GGAKATR GRPW+CACTIHGFKDQ QACEFESKWKEVSRK+
Sbjct: 61  VGVTLDFDRRLKQHNGEIKGGAKATRTGRPWLCACTIHGFKDQGQACEFESKWKEVSRKI 120

Query: 121 PHQRKKNDMGKQVDDQTLRLLKHREGALEKVK 153
            +++K++DMGKQVDDQTLRLLKHR+ AL KVK
Sbjct: 121 SYKKKEDDMGKQVDDQTLRLLKHRQRALGKVK 151

[Close]

BLAST of Sgr008701 vs. NCBI nr
Match: XP_022982643.1 (structure-specific endonuclease subunit slx1 isoform X1 [Cucurbita maxima])

HSP 1 Score: 215.3 bits (547), Expect = 7.0e-52
Identity = 112/154 (72.73%), Postives = 128/154 (83.12%), Query Frame = 0


Query: 1   MRVLSQTFRCHKRPIANPDVPKPSSSSTEDPVAVTLSVKSKP--KPWCVYLIISSNFPIK 60
           MR+LSQTFR  K PI++P+V K SSSST+ P   TL++KS+P  K WCVYLIISSN PIK
Sbjct: 1   MRLLSQTFRSQKLPISSPEVSKSSSSSTKVP---TLTIKSEPETKKWCVYLIISSNPPIK 60

Query: 61  TYVGVTLNFARRLKQHNGEIEGGAKATRAGRPWICACTIHGFKDQSQACEFESKWKEVSR 120
           TYVGVTL+F RRLKQHNGEI+GGAKATRAGRPWICAC IHGFK+QSQACEFESKWKE+ R
Sbjct: 61  TYVGVTLDFDRRLKQHNGEIKGGAKATRAGRPWICACKIHGFKNQSQACEFESKWKEICR 120

Query: 121 KLPHQRKKNDMGKQVDDQTLRLLKHREGALEKVK 153
           K+ H RK     ++VDDQTLRLLK R+ AL KVK
Sbjct: 121 KMSHMRK-----EEVDDQTLRLLKQRQRALGKVK 146

[Close]

BLAST of Sgr008701 vs. ExPASy Swiss-Prot
Match: B6JY16 (Structure-specific endonuclease subunit slx1 OS=Schizosaccharomyces japonicus (strain yFS275 / FY16936) OX=402676 GN=slx1 PE=3 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 1.6e-11
Identity = 37/95 (38.95%), Postives = 54/95 (56.84%), Query Frame = 0


Query: 45  WCVYLIISSNFPIKT-YVGVTLNFARRLKQHNGEIEGGAKATRAGRPWICACTIHGFKDQ 104
           +C YL++S     ++ Y+G T + ARRL+QHNGEI+GGA  T+  RPW  AC +HGF  +
Sbjct: 3   YCCYLLVSEKAASRSVYIGSTPDPARRLRQHNGEIKGGAYKTKRSRPWKVACFVHGFPTK 62

Query: 105 SQACEFESKWKEVSRKLPHQRKKNDMGKQVDDQTL 139
             A +FE  W+          +++     V  QTL
Sbjct: 63  IAALQFEWVWQHPQSTRHDDLRQHSRVVSVKRQTL 97

[Close]

BLAST of Sgr008701 vs. ExPASy Swiss-Prot
Match: Q9P7M3 (Structure-specific endonuclease subunit slx1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=slx1 PE=1 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 1.8e-10
Identity = 31/74 (41.89%), Postives = 46/74 (62.16%), Query Frame = 0


Query: 45  WCVYLIISSNFPIK--TYVGVTLNFARRLKQHNGEIEGGAKATRAGRPWICACTIHGFKD 104
           +C YL+ S+        Y+G T +  RRL+QHNGEI GGA  T+ GRPW  +C ++GF +
Sbjct: 7   YCCYLLKSNRTQSSGAVYIGSTPDPPRRLRQHNGEIVGGASKTKHGRPWSISCLVYGFPN 66

Query: 105 QSQACEFESKWKEV 117
           +  A +FE  W+ +
Sbjct: 67  KVSALKFEWNWQNL 80

[Close]

BLAST of Sgr008701 vs. ExPASy Swiss-Prot
Match: A4I1H7 (Structure-specific endonuclease subunit SLX1 homolog OS=Leishmania infantum OX=5671 GN=LinJ25.1380 PE=3 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 6.9e-10
Identity = 36/82 (43.90%), Postives = 48/82 (58.54%), Query Frame = 0


Query: 46  CVYLIISSNFPIK--TYVGVTLNFARRLKQHNGEIEGGAKAT-RAGRPWICACTIHGFKD 105
           CVYL+ S +   +   Y+G T+N  RRL+QHNGE+  GA+ T R GRPW   C + GF D
Sbjct: 7   CVYLLTSLDPQCEGDFYIGYTVNPLRRLRQHNGELVNGARRTSRRGRPWTIVCCVSGFPD 66

Query: 106 QSQACEFESKWKE--VSRKLPH 123
              A +FE  W+    S +L H
Sbjct: 67  DRAALKFEWCWQHPTASARLRH 88

[Close]

BLAST of Sgr008701 vs. ExPASy Swiss-Prot
Match: B8MDD1 (Structure-specific endonuclease subunit slx1 OS=Talaromyces stipitatus (strain ATCC 10500 / CBS 375.48 / QM 6759 / NRRL 1006) OX=441959 GN=slx1 PE=3 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 9.0e-10
Identity = 35/84 (41.67%), Postives = 49/84 (58.33%), Query Frame = 0


Query: 37  SVKSKPKP--WCVYLIISSNFPIKTYVGVTLNFARRLKQHNGEIEGGAKATRAG--RPWI 96
           +V +KP P  +C YL+ S+  P   Y+G T + ARRL+QHNG  +GGAK T     RPW 
Sbjct: 9   AVLTKPIPAFYCCYLLRSAKRPSALYIGSTPDPARRLEQHNGFAKGGAKRTERNTLRPWE 68

Query: 97  CACTIHGFKDQSQACEFESKWKEV 117
               + GF  ++ A +FE  W+ V
Sbjct: 69  MVAIVEGFPSRTGALQFEWSWQHV 92

[Close]

BLAST of Sgr008701 vs. ExPASy Swiss-Prot
Match: Q0UAL6 (Structure-specific endonuclease subunit SLX1 OS=Phaeosphaeria nodorum (strain SN15 / ATCC MYA-4574 / FGSC 10173) OX=321614 GN=SLX1 PE=3 SV=3)

HSP 1 Score: 64.3 bits (155), Expect = 2.6e-09
Identity = 36/83 (43.37%), Postives = 48/83 (57.83%), Query Frame = 0


Query: 36  LSVKSKPKP--WCVYLIISSNFPIKTYVGVTLNFARRLKQHNGEIEGGAKAT--RAGRPW 95
           L ++S+P P  +C YL+ S N     Y+G T N ARRL QHNG  +GGAK T  +  RPW
Sbjct: 5   LKIESRPIPAFYCCYLLRSKNRK-SYYIGSTPNPARRLGQHNGSSKGGAKRTSMQGKRPW 64

Query: 96  ICACTIHGFKDQSQACEFESKWK 115
              C + GF  +  A +FE  W+
Sbjct: 65  EMTCIVTGFPSKFAALQFEWAWQ 86

[Close]

BLAST of Sgr008701 vs. ExPASy TrEMBL
Match: A0A6J1DGL6 (structure-specific endonuclease subunit SLX1 OS=Momordica charantia OX=3673 GN=LOC111020266 PE=4 SV=1)

HSP 1 Score: 240.4 bits (612), Expect = 9.8e-60
Identity = 121/155 (78.06%), Postives = 135/155 (87.10%), Query Frame = 0


Query: 1   MRVLSQTFRCHKRPIANPDVPKP-SSSSTEDPVAVTLSVKS--KPKPWCVYLIISSNFPI 60
           MR+LS TFRCHK PI+N   PKP SSSST+DP A TLS +S  KPKPWCVYLIISSN P 
Sbjct: 33  MRLLSHTFRCHKSPISN---PKPSSSSSTKDPSAATLSFESQLKPKPWCVYLIISSNSPF 92

Query: 61  KTYVGVTLNFARRLKQHNGEIEGGAKATRAGRPWICACTIHGFKDQSQACEFESKWKEVS 120
           KTYVGVTLNF+RRLKQHNGEI+GGAKATRAGRPW+CAC IHGFKDQSQACEFESKWKEVS
Sbjct: 93  KTYVGVTLNFSRRLKQHNGEIKGGAKATRAGRPWVCACMIHGFKDQSQACEFESKWKEVS 152

Query: 121 RKLPHQRKKNDMGKQVDDQTLRLLKHREGALEKVK 153
           RK+ H+RKK+D  +Q D+Q LRLLK+R+ ALEKVK
Sbjct: 153 RKIAHKRKKDDEEEQADEQKLRLLKNRQRALEKVK 184

[Close]

BLAST of Sgr008701 vs. ExPASy TrEMBL
Match: A0A1S3CFH5 (structure-specific endonuclease subunit slx1 OS=Cucumis melo OX=3656 GN=LOC103500344 PE=4 SV=1)

HSP 1 Score: 240.0 bits (611), Expect = 1.3e-59
Identity = 114/152 (75.00%), Postives = 134/152 (88.16%), Query Frame = 0


Query: 1   MRVLSQTFRCHKRPIANPDVPKPSSSSTEDPVAVTLSVKSKPKPWCVYLIISSNFPIKTY 60
           MR+LSQTFRC K PI+NP +PK SSSST+ P  +    + KPK WCVYLIISSN PIKTY
Sbjct: 1   MRLLSQTFRCQKPPISNPRLPKSSSSSTKGPTLIVKLEEPKPKQWCVYLIISSNSPIKTY 60

Query: 61  VGVTLNFARRLKQHNGEIEGGAKATRAGRPWICACTIHGFKDQSQACEFESKWKEVSRKL 120
           VGVTL+F RRLKQHNGEI+GGAKAT+AGRPWICACTIHGFKDQSQACEFESKWK+VSRK+
Sbjct: 61  VGVTLDFDRRLKQHNGEIKGGAKATQAGRPWICACTIHGFKDQSQACEFESKWKKVSRKI 120

Query: 121 PHQRKKNDMGKQVDDQTLRLLKHREGALEKVK 153
            +++K++D+GKQ+D+QTLRLLKHR+ AL KVK
Sbjct: 121 SYEKKEDDVGKQLDNQTLRLLKHRQRALGKVK 152

[Close]

BLAST of Sgr008701 vs. ExPASy TrEMBL
Match: A0A0A0LCZ9 (GIY-YIG domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G683170 PE=4 SV=1)

HSP 1 Score: 236.5 bits (602), Expect = 1.4e-58
Identity = 119/156 (76.28%), Postives = 135/156 (86.54%), Query Frame = 0


Query: 1   MRVLSQTFRCHKRPIANPDVPKPSSSSTEDPVAVTLSVKSKPKP----WCVYLIISSNFP 60
           MR+LS TFRC K PI+NP + K SSSS++DP   TL VKS+PKP    WCVYLIISSN P
Sbjct: 1   MRLLSHTFRCVKPPISNPPLSKSSSSSSKDP---TLIVKSEPKPKLKQWCVYLIISSNSP 60

Query: 61  IKTYVGVTLNFARRLKQHNGEIEGGAKATRAGRPWICACTIHGFKDQSQACEFESKWKEV 120
           IKTYVGVTL+F RRLKQHNGEI+GGAKATRAGRPWICACTIHGFKDQSQACEFESKWK+V
Sbjct: 61  IKTYVGVTLDFDRRLKQHNGEIKGGAKATRAGRPWICACTIHGFKDQSQACEFESKWKKV 120

Query: 121 SRKLPHQRKKNDMGKQVDDQTLRLLKHREGALEKVK 153
           SRK+ +++K+ D+GK +DDQTLRLLKHRE AL KVK
Sbjct: 121 SRKISYEKKEEDVGKLLDDQTLRLLKHRERALGKVK 153

[Close]

BLAST of Sgr008701 vs. ExPASy TrEMBL
Match: A0A6J1J5C9 (structure-specific endonuclease subunit slx1 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111481456 PE=4 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 3.4e-52
Identity = 112/154 (72.73%), Postives = 128/154 (83.12%), Query Frame = 0


Query: 1   MRVLSQTFRCHKRPIANPDVPKPSSSSTEDPVAVTLSVKSKP--KPWCVYLIISSNFPIK 60
           MR+LSQTFR  K PI++P+V K SSSST+ P   TL++KS+P  K WCVYLIISSN PIK
Sbjct: 1   MRLLSQTFRSQKLPISSPEVSKSSSSSTKVP---TLTIKSEPETKKWCVYLIISSNPPIK 60

Query: 61  TYVGVTLNFARRLKQHNGEIEGGAKATRAGRPWICACTIHGFKDQSQACEFESKWKEVSR 120
           TYVGVTL+F RRLKQHNGEI+GGAKATRAGRPWICAC IHGFK+QSQACEFESKWKE+ R
Sbjct: 61  TYVGVTLDFDRRLKQHNGEIKGGAKATRAGRPWICACKIHGFKNQSQACEFESKWKEICR 120

Query: 121 KLPHQRKKNDMGKQVDDQTLRLLKHREGALEKVK 153
           K+ H RK     ++VDDQTLRLLK R+ AL KVK
Sbjct: 121 KMSHMRK-----EEVDDQTLRLLKQRQRALGKVK 146

[Close]

BLAST of Sgr008701 vs. ExPASy TrEMBL
Match: A0A6J1F1V2 (structure-specific endonuclease subunit slx1 OS=Cucurbita moschata OX=3662 GN=LOC111441428 PE=4 SV=1)

HSP 1 Score: 214.5 bits (545), Expect = 5.8e-52
Identity = 113/154 (73.38%), Postives = 127/154 (82.47%), Query Frame = 0


Query: 1   MRVLSQTFRCHKRPIANPDVPKPSSSSTEDPVAVTLSVKSKPKP--WCVYLIISSNFPIK 60
           MR+LSQTFR  K PI++P+V K SSSST+ P   TL VKS+P+P  WCVYLIISSN PIK
Sbjct: 1   MRLLSQTFRSQKLPISSPEVSKSSSSSTKVP---TLIVKSEPEPKKWCVYLIISSNPPIK 60

Query: 61  TYVGVTLNFARRLKQHNGEIEGGAKATRAGRPWICACTIHGFKDQSQACEFESKWKEVSR 120
           TYVGVTL+F RRLKQHNGEI+GGAKATRAGRPWICAC IHGFKDQSQACEFESKWKE+ R
Sbjct: 61  TYVGVTLDFDRRLKQHNGEIKGGAKATRAGRPWICACKIHGFKDQSQACEFESKWKEICR 120

Query: 121 KLPHQRKKNDMGKQVDDQTLRLLKHREGALEKVK 153
           K+ H RK     ++VDD TLRLLK R+ AL KVK
Sbjct: 121 KMCHMRK-----EEVDDVTLRLLKQRQRALGKVK 146

[Close]

BLAST of Sgr008701 vs. TAIR 10
Match: AT5G43210.1 (Excinuclease ABC, C subunit, N-terminal )

HSP 1 Score: 143.3 bits (360), Expect = 3.1e-34
Identity = 81/159 (50.94%), Postives = 103/159 (64.78%), Query Frame = 0


Query: 2   RVLSQTFRCHKRPIANPDVPK---PSSSSTEDPVAVTLSVKS-----KPKPWCVYLIISS 61
           R+LS+TF   K   +NP  P+     +S T+ P+  + S +      K K W VYLI+S+
Sbjct: 3   RLLSRTFPSVKLRDSNPKAPEFKNLKNSQTQVPIPSSSSPQENSKIPKSKSWSVYLILST 62

Query: 62  NFPIKTYVGVTLNFARRLKQHNGEIEGGAKATRAGRPWICACTIHGFKDQSQACEFESKW 121
             PIKTYVG+T +F+RRLKQHNGEI GGAKA+ AGRPW+CAC I GF   SQA  FESKW
Sbjct: 63  TEPIKTYVGITTDFSRRLKQHNGEIRGGAKASSAGRPWLCACIITGFTCLSQASSFESKW 122

Query: 122 KEVSRKLPHQRKKNDMGKQVDDQTLRLLKHREGALEKVK 153
           K  +RKLP ++K  DM      Q+  LL+HR  AL KV+
Sbjct: 123 KIFTRKLPRRKKDEDM-----SQSDALLQHRRRALNKVE 156

[Close]

BLAST of Sgr008701 vs. TAIR 10
Match: AT2G30350.2 (Excinuclease ABC, C subunit, N-terminal )

HSP 1 Score: 59.3 bits (142), Expect = 6.0e-09
Identity = 26/57 (45.61%), Postives = 35/57 (61.40%), Query Frame = 0


Query: 58  KTYVGVTLNFARRLKQHNGEIEGGAKATRAGRPWICACTIHGFKDQSQACEFESKWK 115
           +TY+G T+N  RR++QHNGEI  GA  T+  RPW     I+GF     A +FE  W+
Sbjct: 43  QTYIGFTVNPRRRIRQHNGEITSGAWRTKKKRPWEMVLCIYGFPTNVSALQFEWAWQ 99

The following BLAST results are available for this feature:

BLAST of Sgr008701 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022152567.1	2.0e-59	78.06	structure-specific endonuclease subunit SLX1 [Momordica charantia]	[more]
XP_008461838.1	2.7e-59	75.00	PREDICTED: structure-specific endonuclease subunit slx1 [Cucumis melo] >XP_00846...	[more]
XP_004151512.1	2.9e-58	76.28	structure-specific endonuclease subunit SLX1 [Cucumis sativus] >KGN58557.1 hypot...	[more]
XP_038903984.1	1.6e-56	74.34	structure-specific endonuclease subunit slx1 isoform X1 [Benincasa hispida]	[more]
XP_022982643.1	7.0e-52	72.73	structure-specific endonuclease subunit slx1 isoform X1 [Cucurbita maxima]	[more]

BLAST of Sgr008701 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B6JY16	1.6e-11	38.95	Structure-specific endonuclease subunit slx1 OS=Schizosaccharomyces japonicus (s...	[more]
Q9P7M3	1.8e-10	41.89	Structure-specific endonuclease subunit slx1 OS=Schizosaccharomyces pombe (strai...	[more]
A4I1H7	6.9e-10	43.90	Structure-specific endonuclease subunit SLX1 homolog OS=Leishmania infantum OX=5...	[more]
B8MDD1	9.0e-10	41.67	Structure-specific endonuclease subunit slx1 OS=Talaromyces stipitatus (strain A...	[more]
Q0UAL6	2.6e-09	43.37	Structure-specific endonuclease subunit SLX1 OS=Phaeosphaeria nodorum (strain SN...	[more]

BLAST of Sgr008701 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DGL6	9.8e-60	78.06	structure-specific endonuclease subunit SLX1 OS=Momordica charantia OX=3673 GN=L...	[more]
A0A1S3CFH5	1.3e-59	75.00	structure-specific endonuclease subunit slx1 OS=Cucumis melo OX=3656 GN=LOC10350...	[more]
A0A0A0LCZ9	1.4e-58	76.28	GIY-YIG domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G683170 PE=...	[more]
A0A6J1J5C9	3.4e-52	72.73	structure-specific endonuclease subunit slx1 isoform X1 OS=Cucurbita maxima OX=3...	[more]
A0A6J1F1V2	5.8e-52	73.38	structure-specific endonuclease subunit slx1 OS=Cucurbita moschata OX=3662 GN=LO...	[more]

BLAST of Sgr008701 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G43210.1	3.1e-34	50.94	Excinuclease ABC, C subunit, N-terminal	[more]
AT2G30350.2	6.0e-09	45.61	Excinuclease ABC, C subunit, N-terminal	[more]

InterPro

Analysis Name: InterPro Annotations of Monk fruit (Qingpiguo) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR035901	GIY-YIG endonuclease superfamily	GENE3D	3.40.1440.10		coord: 38..147 e-value: 4.9E-23 score: 83.0
IPR035901	GIY-YIG endonuclease superfamily	SUPERFAMILY	82771	GIY-YIG endonuclease	coord: 44..120
IPR000305	GIY-YIG endonuclease	PFAM	PF01541	GIY-YIG	coord: 45..119 e-value: 1.7E-14 score: 53.8
IPR000305	GIY-YIG endonuclease	PROSITE	PS50164	GIY_YIG	coord: 43..128 score: 17.891838
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 227..242
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 220..294
None	No IPR available	PANTHER	PTHR20208	STRUCTURE-SPECIFIC ENDONUCLEASE SUBUNIT SLX1	coord: 20..154
None	No IPR available	PANTHER	PTHR20208:SF13	EMB\|CAB76036.1	coord: 20..154

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sgr008701.1	Sgr008701.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000724	double-strand break repair via homologous recombination
biological_process	GO:0090305	nucleic acid phosphodiester bond hydrolysis
cellular_component	GO:0033557	Slx1-Slx4 complex
molecular_function	GO:0017108	5'-flap endonuclease activity
molecular_function	GO:0008821	crossover junction endodeoxyribonuclease activity