Sgr005219 (gene) Monk fruit (Qingpiguo) v1

Overview


Name	Sgr005219
Type	gene
Organism	Siraitia grosvenorii (Monk fruit (Qingpiguo) v1)
Description	NERD domain-containing protein
Location	tig00003625: 66202 .. 67387 (-)
RNA-Seq Expression	Sgr005219
Synteny	Sgr005219

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GACTATGATGATAATGGAACTCAAGTGCTTTTGCGTTTTTCTTCATGCTTCCAGACAAATTTATCACTTCATGCAGAGCGGTTATCTAAAATATGAGATGAAAGGAGAAAGTAGAAAATAGAGATGGTACTTTTTGTGTGAATTTTATTTTTACTTTCTGCAGGTTGGAGCTTAAAGGGAAATATATACTAGGAGACTTTCTGGAATTCAAGGGTAAGGAAGAAGATATTGAGGATTTGAGAGATATCAAACGATCAAAGATTAGTCATGTGACCATTCAAAAGACGAGCATGCTTGGATTTGGTAATTTTCTGTATATTTACTACTTGATAAGAAACTGTACTTCGCTTAATCACTTTTATTTTATGAGATGCAGGAGTTAATAAATCAGAATTTTCAAAATTTACTATTAGATTGATCGGCTCTTAAATTGAGAACGGTTCACAATTTTACATCTCTAACATGGGGCAATTTTGCTTGAAAGGGGAACAATTGGATGTTTTAAGATGGGAATATTGTCGTGGACAAGCTAAGGAAGAAACTGTTTCCTTGCTCCTTTGGTGGGGACTTCAATGCTACTACTCCAACTCCACCTCTTTACCCATGTGTTTTTTTTTGGGGGGGAGGGGGAGGGGGAGGGGGAGGGGTTCAATCGCAAATTTAGTCTCTAAATTTTAAAAGTTTCCTATTGACAAATAGATGGTAAAAGGAAATGGATAGTGGGATAAAATATTGTAGCATGTGCAACATACACTTTTTTTTTTAAACAATATATTAGATCCCTTATGTTGAACTTGCAACTCTATCTTGTCCTATTGTTTACTTTCTGATATTATCTGTCACATCCGTGTTGAATTTGTTTAATAGACATATCGTTACGTTATTGATGGTATTATCAGAAGCTAGCTTCCTTAATATGTTATCACAAGCTAGCATACTTAATTTGTTCTTCTACAACATTGTCAAATTATTGTATATACTTAATTTTCTTATTTCTGTATATGCAGCTCCTTCAAGGCTTCAAGTATTGTATACTCCCCGCGATTACCGAAGTGGGGGCTCATCTTCAGAGTGGAGGGAAGTGAATGTAAGATCAAGCACAGAGATTTTATTTCAACCTCAGAATTCTACGAAAATTCGTAAGTTCAAACTCTCTTCAGTTATCTCCTTGACACTCAGTGCGTAG

mRNA sequence

GACTATGATGATAATGGAACTCAAGTGCTTTTGCGTTTTTCTTCATGCTTCCAGACAAATTTATCACTTCATGCAGAGCGGTTGGAGCTTAAAGGGAAATATATACTAGGAGACTTTCTGGAATTCAAGGGTAAGGAAGAAGATATTGAGGATTTGAGAGATATCAAACGATCAAAGATTAGTCATGTGACCATTCAAAAGACGAGCATGCTTGGATTTGCTCCTTCAAGGCTTCAAGTATTGTATACTCCCCGCGATTACCGAAGTGGGGGCTCATCTTCAGAGTGGAGGGAAGTGAATGTAAGATCAAGCACAGAGATTTTATTTCAACCTCAGAATTCTACGAAAATTCGTAAGTTCAAACTCTCTTCAGTTATCTCCTTGACACTCAGTGCGTAG

Coding sequence (CDS)

GACTATGATGATAATGGAACTCAAGTGCTTTTGCGTTTTTCTTCATGCTTCCAGACAAATTTATCACTTCATGCAGAGCGGTTGGAGCTTAAAGGGAAATATATACTAGGAGACTTTCTGGAATTCAAGGGTAAGGAAGAAGATATTGAGGATTTGAGAGATATCAAACGATCAAAGATTAGTCATGTGACCATTCAAAAGACGAGCATGCTTGGATTTGCTCCTTCAAGGCTTCAAGTATTGTATACTCCCCGCGATTACCGAAGTGGGGGCTCATCTTCAGAGTGGAGGGAAGTGAATGTAAGATCAAGCACAGAGATTTTATTTCAACCTCAGAATTCTACGAAAATTCGTAAGTTCAAACTCTCTTCAGTTATCTCCTTGACACTCAGTGCGTAG

Protein sequence

DYDDNGTQVLLRFSSCFQTNLSLHAERLELKGKYILGDFLEFKGKEEDIEDLRDIKRSKISHVTIQKTSMLGFAPSRLQVLYTPRDYRSGGSSSEWREVNVRSSTEILFQPQNSTKIRKFKLSSVISLTLSA

Homology

[Close]

BLAST of Sgr005219 vs. NCBI nr
Match: XP_008459170.1 (PREDICTED: uncharacterized protein LOC103498367 [Cucumis melo] >KAA0032101.1 Plasma membrane isoform 1 [Cucumis melo var. makuwa] >TYK20961.1 Plasma membrane isoform 1 [Cucumis melo var. makuwa])

HSP 1 Score: 186.8 bits (473), Expect = 1.2e-43
Identity = 96/109 (88.07%), Postives = 104/109 (95.41%), Query Frame = 0


Query: 26  ERLELKGKYILGDFLEFKGKEEDIEDLRDIKRSKISHVTIQKTSMLGFAPSRLQVLYTPR 85
           ++LELKGKYILGDFLEF+GKEED++ LRDIKRSKISH+TIQKTSMLGFAP+RLQVLY PR
Sbjct: 213 DKLELKGKYILGDFLEFRGKEEDVDYLRDIKRSKISHLTIQKTSMLGFAPTRLQVLYAPR 272

Query: 86  DYRSGG--SSSEWREVNVRSSTEILFQPQNSTKIRKFKLSSVISLTLSA 133
           DYRSGG  SSSEWREV VRSSTEILFQPQNSTK+RKFKLSSVISLTLSA
Sbjct: 273 DYRSGGSASSSEWREVTVRSSTEILFQPQNSTKVRKFKLSSVISLTLSA 321

[Close]

BLAST of Sgr005219 vs. NCBI nr
Match: XP_022148662.1 (uncharacterized protein LOC111017264 [Momordica charantia])

HSP 1 Score: 185.3 bits (469), Expect = 3.5e-43
Identity = 91/107 (85.05%), Postives = 103/107 (96.26%), Query Frame = 0


Query: 26  ERLELKGKYILGDFLEFKGKEEDIEDLRDIKRSKISHVTIQKTSMLGFAPSRLQVLYTPR 85
           ++LELKGKY+LGDFLEFKGK+ED+EDLR+IKRSK+S +TIQKTSMLGFAP+RLQVLY  R
Sbjct: 213 DKLELKGKYVLGDFLEFKGKDEDVEDLREIKRSKVSQMTIQKTSMLGFAPTRLQVLYASR 272

Query: 86  DYRSGGSSSEWREVNVRSSTEILFQPQNSTKIRKFKLSSVISLTLSA 133
           DYRSGGS+S+W+EVNVRSSTEILFQPQNSTK RKFKLSSVISLTLSA
Sbjct: 273 DYRSGGSTSDWKEVNVRSSTEILFQPQNSTKTRKFKLSSVISLTLSA 319

[Close]

BLAST of Sgr005219 vs. NCBI nr
Match: XP_004148081.1 (uncharacterized protein LOC101217532 [Cucumis sativus] >KGN63421.1 hypothetical protein Csa_022597 [Cucumis sativus])

HSP 1 Score: 184.1 bits (466), Expect = 7.7e-43
Identity = 95/109 (87.16%), Postives = 103/109 (94.50%), Query Frame = 0


Query: 26  ERLELKGKYILGDFLEFKGKEEDIEDLRDIKRSKISHVTIQKTSMLGFAPSRLQVLYTPR 85
           ++LELKGKYILGDFLEF+GKEED++ LRDIKRSKISH+TIQKTSMLGFAP+RLQVLY PR
Sbjct: 213 DKLELKGKYILGDFLEFRGKEEDVDYLRDIKRSKISHLTIQKTSMLGFAPTRLQVLYAPR 272

Query: 86  DYRSGG--SSSEWREVNVRSSTEILFQPQNSTKIRKFKLSSVISLTLSA 133
           DYRSGG  S+SEWREV VRSSTEILFQPQNSTK RKFKLSSVISLTLSA
Sbjct: 273 DYRSGGSASASEWREVTVRSSTEILFQPQNSTKARKFKLSSVISLTLSA 321

[Close]

BLAST of Sgr005219 vs. NCBI nr
Match: XP_038901981.1 (uncharacterized protein LOC120088636 [Benincasa hispida])

HSP 1 Score: 184.1 bits (466), Expect = 7.7e-43
Identity = 95/109 (87.16%), Postives = 103/109 (94.50%), Query Frame = 0


Query: 26  ERLELKGKYILGDFLEFKGKEEDIEDLRDIKRSKISHVTIQKTSMLGFAPSRLQVLYTPR 85
           ++LELKGKYILGDFLEFKGK ED++ LRDIKRSKISH+TIQKTSMLGFAP+RLQVLY PR
Sbjct: 213 DKLELKGKYILGDFLEFKGKGEDVDYLRDIKRSKISHLTIQKTSMLGFAPTRLQVLYAPR 272

Query: 86  DYRSGG--SSSEWREVNVRSSTEILFQPQNSTKIRKFKLSSVISLTLSA 133
           DYRSGG  S+SEWREV VRSSTEILFQPQNSTK+RKFKLSSVISLTLSA
Sbjct: 273 DYRSGGSASASEWREVTVRSSTEILFQPQNSTKVRKFKLSSVISLTLSA 321

[Close]

BLAST of Sgr005219 vs. NCBI nr
Match: XP_022986572.1 (uncharacterized protein LOC111484272 [Cucurbita maxima])

HSP 1 Score: 181.8 bits (460), Expect = 3.8e-42
Identity = 93/109 (85.32%), Postives = 103/109 (94.50%), Query Frame = 0


Query: 26  ERLELKGKYILGDFLEFKGKEEDIEDLRDIKRSKISHVTIQKTSMLGFAPSRLQVLYTPR 85
           ++LELKGKYILG+FLEFKGKEED++DLRDIKRSKISH+TIQKTSMLGFAP+RLQVLY PR
Sbjct: 213 DKLELKGKYILGEFLEFKGKEEDVQDLRDIKRSKISHLTIQKTSMLGFAPTRLQVLYGPR 272

Query: 86  DYRSGG--SSSEWREVNVRSSTEILFQPQNSTKIRKFKLSSVISLTLSA 133
           DYRSGG   +SEW+EV VRSSTEILFQPQNS+K RKFKLSSVISLTLSA
Sbjct: 273 DYRSGGLAPTSEWKEVTVRSSTEILFQPQNSSKARKFKLSSVISLTLSA 321

[Close]

BLAST of Sgr005219 vs. ExPASy TrEMBL
Match: A0A5A7SRC0 (Plasma membrane isoform 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1293G00150 PE=4 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 5.8e-44
Identity = 96/109 (88.07%), Postives = 104/109 (95.41%), Query Frame = 0


Query: 26  ERLELKGKYILGDFLEFKGKEEDIEDLRDIKRSKISHVTIQKTSMLGFAPSRLQVLYTPR 85
           ++LELKGKYILGDFLEF+GKEED++ LRDIKRSKISH+TIQKTSMLGFAP+RLQVLY PR
Sbjct: 213 DKLELKGKYILGDFLEFRGKEEDVDYLRDIKRSKISHLTIQKTSMLGFAPTRLQVLYAPR 272

Query: 86  DYRSGG--SSSEWREVNVRSSTEILFQPQNSTKIRKFKLSSVISLTLSA 133
           DYRSGG  SSSEWREV VRSSTEILFQPQNSTK+RKFKLSSVISLTLSA
Sbjct: 273 DYRSGGSASSSEWREVTVRSSTEILFQPQNSTKVRKFKLSSVISLTLSA 321

[Close]

BLAST of Sgr005219 vs. ExPASy TrEMBL
Match: A0A1S3CA35 (uncharacterized protein LOC103498367 OS=Cucumis melo OX=3656 GN=LOC103498367 PE=4 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 5.8e-44
Identity = 96/109 (88.07%), Postives = 104/109 (95.41%), Query Frame = 0


Query: 26  ERLELKGKYILGDFLEFKGKEEDIEDLRDIKRSKISHVTIQKTSMLGFAPSRLQVLYTPR 85
           ++LELKGKYILGDFLEF+GKEED++ LRDIKRSKISH+TIQKTSMLGFAP+RLQVLY PR
Sbjct: 213 DKLELKGKYILGDFLEFRGKEEDVDYLRDIKRSKISHLTIQKTSMLGFAPTRLQVLYAPR 272

Query: 86  DYRSGG--SSSEWREVNVRSSTEILFQPQNSTKIRKFKLSSVISLTLSA 133
           DYRSGG  SSSEWREV VRSSTEILFQPQNSTK+RKFKLSSVISLTLSA
Sbjct: 273 DYRSGGSASSSEWREVTVRSSTEILFQPQNSTKVRKFKLSSVISLTLSA 321

[Close]

BLAST of Sgr005219 vs. ExPASy TrEMBL
Match: A0A6J1D5P0 (uncharacterized protein LOC111017264 OS=Momordica charantia OX=3673 GN=LOC111017264 PE=4 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 1.7e-43
Identity = 91/107 (85.05%), Postives = 103/107 (96.26%), Query Frame = 0


Query: 26  ERLELKGKYILGDFLEFKGKEEDIEDLRDIKRSKISHVTIQKTSMLGFAPSRLQVLYTPR 85
           ++LELKGKY+LGDFLEFKGK+ED+EDLR+IKRSK+S +TIQKTSMLGFAP+RLQVLY  R
Sbjct: 213 DKLELKGKYVLGDFLEFKGKDEDVEDLREIKRSKVSQMTIQKTSMLGFAPTRLQVLYASR 272

Query: 86  DYRSGGSSSEWREVNVRSSTEILFQPQNSTKIRKFKLSSVISLTLSA 133
           DYRSGGS+S+W+EVNVRSSTEILFQPQNSTK RKFKLSSVISLTLSA
Sbjct: 273 DYRSGGSTSDWKEVNVRSSTEILFQPQNSTKTRKFKLSSVISLTLSA 319

[Close]

BLAST of Sgr005219 vs. ExPASy TrEMBL
Match: A0A0A0LTU6 (NERD domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G442250 PE=4 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 3.8e-43
Identity = 95/109 (87.16%), Postives = 103/109 (94.50%), Query Frame = 0


Query: 26  ERLELKGKYILGDFLEFKGKEEDIEDLRDIKRSKISHVTIQKTSMLGFAPSRLQVLYTPR 85
           ++LELKGKYILGDFLEF+GKEED++ LRDIKRSKISH+TIQKTSMLGFAP+RLQVLY PR
Sbjct: 213 DKLELKGKYILGDFLEFRGKEEDVDYLRDIKRSKISHLTIQKTSMLGFAPTRLQVLYAPR 272

Query: 86  DYRSGG--SSSEWREVNVRSSTEILFQPQNSTKIRKFKLSSVISLTLSA 133
           DYRSGG  S+SEWREV VRSSTEILFQPQNSTK RKFKLSSVISLTLSA
Sbjct: 273 DYRSGGSASASEWREVTVRSSTEILFQPQNSTKARKFKLSSVISLTLSA 321

[Close]

BLAST of Sgr005219 vs. ExPASy TrEMBL
Match: A0A6J1J7Y0 (uncharacterized protein LOC111484272 OS=Cucurbita maxima OX=3661 GN=LOC111484272 PE=4 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 1.9e-42
Identity = 93/109 (85.32%), Postives = 103/109 (94.50%), Query Frame = 0


Query: 26  ERLELKGKYILGDFLEFKGKEEDIEDLRDIKRSKISHVTIQKTSMLGFAPSRLQVLYTPR 85
           ++LELKGKYILG+FLEFKGKEED++DLRDIKRSKISH+TIQKTSMLGFAP+RLQVLY PR
Sbjct: 213 DKLELKGKYILGEFLEFKGKEEDVQDLRDIKRSKISHLTIQKTSMLGFAPTRLQVLYGPR 272

Query: 86  DYRSGG--SSSEWREVNVRSSTEILFQPQNSTKIRKFKLSSVISLTLSA 133
           DYRSGG   +SEW+EV VRSSTEILFQPQNS+K RKFKLSSVISLTLSA
Sbjct: 273 DYRSGGLAPTSEWKEVTVRSSTEILFQPQNSSKARKFKLSSVISLTLSA 321

[Close]

BLAST of Sgr005219 vs. TAIR 10
Match: AT1G65020.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NERD (InterPro:IPR011528); Has 69 Blast hits to 69 proteins in 27 species: Archae - 0; Bacteria - 18; Metazoa - 8; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). )

HSP 1 Score: 138.3 bits (347), Expect = 4.5e-33
Identity = 74/109 (67.89%), Postives = 94/109 (86.24%), Query Frame = 0


Query: 26  ERLELK-GKYILGDFLEFKGKEEDIEDLRDIKRSKISHVTIQKTSMLGFAPSRLQVLYTP 85
           +R+ELK  K +LG+FLEFKGK+ED   LR+IKRSK+  V+IQKTSM G APSRLQVLY+ 
Sbjct: 211 DRVELKSSKIVLGEFLEFKGKQEDTLALRNIKRSKVDRVSIQKTSMFGLAPSRLQVLYSY 270

Query: 86  RDYRSGGSS-SEWREVNVRSSTEILFQPQNSTKIRKFKLSSVISLTLSA 133
           RDYRS GSS +E +EV VRSSTE+LFQP++STK++KFKLSS++S++LSA
Sbjct: 271 RDYRSEGSSGAESKEVTVRSSTEVLFQPRDSTKMKKFKLSSLVSISLSA 319

The following BLAST results are available for this feature:

BLAST of Sgr005219 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008459170.1	1.2e-43	88.07	PREDICTED: uncharacterized protein LOC103498367 [Cucumis melo] >KAA0032101.1 Pla...	[more]
XP_022148662.1	3.5e-43	85.05	uncharacterized protein LOC111017264 [Momordica charantia]	[more]
XP_004148081.1	7.7e-43	87.16	uncharacterized protein LOC101217532 [Cucumis sativus] >KGN63421.1 hypothetical ...	[more]
XP_038901981.1	7.7e-43	87.16	uncharacterized protein LOC120088636 [Benincasa hispida]	[more]
XP_022986572.1	3.8e-42	85.32	uncharacterized protein LOC111484272 [Cucurbita maxima]	[more]

BLAST of Sgr005219 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sgr005219 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SRC0	5.8e-44	88.07	Plasma membrane isoform 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A1S3CA35	5.8e-44	88.07	uncharacterized protein LOC103498367 OS=Cucumis melo OX=3656 GN=LOC103498367 PE=...	[more]
A0A6J1D5P0	1.7e-43	85.05	uncharacterized protein LOC111017264 OS=Momordica charantia OX=3673 GN=LOC111017...	[more]
A0A0A0LTU6	3.8e-43	87.16	NERD domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G442250 PE=4 S...	[more]
A0A6J1J7Y0	1.9e-42	85.32	uncharacterized protein LOC111484272 OS=Cucurbita maxima OX=3661 GN=LOC111484272...	[more]

BLAST of Sgr005219 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G65020.1	4.5e-33	67.89	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]

InterPro

Analysis Name: InterPro Annotations of Monk fruit (Qingpiguo) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR35287:SF2	BNAA02G11880D PROTEIN	coord: 26..132
None	No IPR available	PANTHER	PTHR35287	SI:ZFOS-911D5.4	coord: 26..132

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sgr005219.1	Sgr005219.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:1902600	proton transmembrane transport
cellular_component	GO:0000221	vacuolar proton-transporting V-type ATPase, V1 domain
molecular_function	GO:0046961	proton-transporting ATPase activity, rotational mechanism