Sgr003110 (gene) Monk fruit (Qingpiguo) v1

Overview
NameSgr003110
Typegene
OrganismSiraitia grosvenorii (Monk fruit (Qingpiguo) v1)
DescriptionClavata3/ESR (CLE) gene family member MtCLE20
Locationtig00001969: 43324 .. 43566 (-)
RNA-Seq ExpressionSgr003110
SyntenySgr003110
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCGGTTCTTCAAGTTTCCGGCAGCCGGTGTGAAGCTGCGGATAATGGCGGTGGCTTTGCTGGTGCTGTTAATCTCCGGCGAGAATGGAGAAGAAAAAGTTGTGGGGTTAAAGGAAGCGACCCCGAATGAGAAAGAGAGAGACAGACAAGTGAAAGAGCAGCGTACGATAAGGTCATTCGATGTTTTCATGTCCGGCAAGAGGAAGGTTCCAAACGCTTCAGATCCACTCCACAACCGTTGA

mRNA sequence

ATGCGGTTCTTCAAGTTTCCGGCAGCCGGTGTGAAGCTGCGGATAATGGCGGTGGCTTTGCTGGTGCTGTTAATCTCCGGCGAGAATGGAGAAGAAAAAGTTGTGGGGTTAAAGGAAGCGACCCCGAATGAGAAAGAGAGAGACAGACAAGTGAAAGAGCAGCGTACGATAAGGTCATTCGATGTTTTCATGTCCGGCAAGAGGAAGGTTCCAAACGCTTCAGATCCACTCCACAACCGTTGA

Coding sequence (CDS)

ATGCGGTTCTTCAAGTTTCCGGCAGCCGGTGTGAAGCTGCGGATAATGGCGGTGGCTTTGCTGGTGCTGTTAATCTCCGGCGAGAATGGAGAAGAAAAAGTTGTGGGGTTAAAGGAAGCGACCCCGAATGAGAAAGAGAGAGACAGACAAGTGAAAGAGCAGCGTACGATAAGGTCATTCGATGTTTTCATGTCCGGCAAGAGGAAGGTTCCAAACGCTTCAGATCCACTCCACAACCGTTGA

Protein sequence

MRFFKFPAAGVKLRIMAVALLVLLISGENGEEKVVGLKEATPNEKERDRQVKEQRTIRSFDVFMSGKRKVPNASDPLHNR
Homology
BLAST of Sgr003110 vs. NCBI nr
Match: RQO86854.1 (hypothetical protein POPTR_002G121800 [Populus trichocarpa])

HSP 1 Score: 61.6 bits (148), Expect = 3.5e-06
Identity = 36/80 (45.00%), Postives = 46/80 (57.50%), Query Frame = 0

Query: 1  MRFFKFPAAGVKLRIMAVALLVLLISGENGEEKVVGLKEATPNEKERDRQVKEQRTIRSF 60
          M + + P   V  + M + LLVL +SG+  EE  V +     N++      K+QR   SF
Sbjct: 10 MHYQQSPRVFVLQKPMVILLLVLFVSGDRKEETTVNV-HGLQNQQPPSSTEKQQRLRHSF 69

Query: 61 DVFMSGKRKVPNASDPLHNR 81
          D F S KRKVPNASDPLHNR
Sbjct: 70 DTFFSSKRKVPNASDPLHNR 88

BLAST of Sgr003110 vs. NCBI nr
Match: EOY15803.1 (Uncharacterized protein TCM_034761 [Theobroma cacao])

HSP 1 Score: 61.2 bits (147), Expect = 4.6e-06
Identity = 35/70 (50.00%), Postives = 45/70 (64.29%), Query Frame = 0

Query: 15 IMAVALLVLLISGENGEEK--VVGLKEATPNEKERD--RQVKEQRTIRSFDVFMSGKRKV 74
          ++ + LL LL+SG+  EE   +VG+   +P  KE+   RQ + QR    FD F S KRKV
Sbjct: 16 VVVIMLLSLLVSGDQKEESSVLVGMNGYSPGTKEKQPVRQQQHQRLRHHFDAFFSSKRKV 75

Query: 75 PNASDPLHNR 81
          PNASDPLHNR
Sbjct: 76 PNASDPLHNR 85

BLAST of Sgr003110 vs. NCBI nr
Match: KAG6784477.1 (hypothetical protein POTOM_010173 [Populus tomentosa])

HSP 1 Score: 60.1 bits (144), Expect = 1.0e-05
Identity = 35/80 (43.75%), Postives = 46/80 (57.50%), Query Frame = 0

Query: 1   MRFFKFPAAGVKLRIMAVALLVLLISGENGEEKVVGLKEATPNEKERDRQVKEQRTIRSF 60
           M + + P   V  + + + LLVL +SG+  EE  V +     N++      K+QR   SF
Sbjct: 100 MHYQQSPRVFVLQKPIVILLLVLFVSGDRKEETTVNV-HGLQNQQPPSSTEKQQRLRHSF 159

Query: 61  DVFMSGKRKVPNASDPLHNR 81
           D F S KRKVPNASDPLHNR
Sbjct: 160 DTFFSSKRKVPNASDPLHNR 178

BLAST of Sgr003110 vs. NCBI nr
Match: KAB5568891.1 (hypothetical protein DKX38_002684 [Salix brachista])

HSP 1 Score: 60.1 bits (144), Expect = 1.0e-05
Identity = 33/69 (47.83%), Postives = 45/69 (65.22%), Query Frame = 0

Query: 14 RIMAVALLVLLISGENGEEKVVGLKEATPNEKE--RDRQVKEQRTIRSFDVFMSGKRKVP 73
          +++ + LLVL ISG+  EEK V +     N++      + ++QR  RSFD F S KRKVP
Sbjct: 23 KLVVLILLVLFISGDQKEEKTVRIVHGLQNQQPPGSTEKQQQQRLRRSFDKFFSSKRKVP 82

Query: 74 NASDPLHNR 81
          NA+DPLHNR
Sbjct: 83 NAADPLHNR 91

BLAST of Sgr003110 vs. NCBI nr
Match: OIW14530.1 (hypothetical protein TanjilG_12929, partial [Lupinus angustifolius])

HSP 1 Score: 58.9 bits (141), Expect = 2.3e-05
Identity = 39/73 (53.42%), Postives = 44/73 (60.27%), Query Frame = 0

Query: 14 RIMAVALLVLLISGENGEEKVVGLKEATPNEKERD-RQVK-----EQRTIRSFDVFMSGK 73
          R++   LL  L+ GE  EE VVGL    PN +E+  RQ K     EQ     FDVF S K
Sbjct: 16 RVLFFVLLTFLVCGEK-EESVVGLSNQKPNTQEKQLRQKKLLQHQEQVPKYPFDVFASEK 75

Query: 74 RKVPNASDPLHNR 81
          RKVPNASDPLHNR
Sbjct: 76 RKVPNASDPLHNR 87

BLAST of Sgr003110 vs. ExPASy TrEMBL
Match: F6GZW1 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_18s0001g09630 PE=4 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 1.7e-06
Identity = 34/81 (41.98%), Postives = 51/81 (62.96%), Query Frame = 0

Query: 1  MRFFKFPAAGVKLRIMAVALLVLLISGENGEEKVVGLKEATPNEKERDRQVKEQRTIR-S 60
          MR ++    G+  + M +  L LL+ G+  E   VG    +P  +E+ +Q ++Q+ +R S
Sbjct: 1  MRSYQCLRVGLLQKFMVLVFLSLLVFGQKEEAMDVGTNGESPGIQEKQQQKQQQQRLRHS 60

Query: 61 FDVFMSGKRKVPNASDPLHNR 81
           DVF+S KR+VPNASDPLHNR
Sbjct: 61 LDVFLSSKRRVPNASDPLHNR 81

BLAST of Sgr003110 vs. ExPASy TrEMBL
Match: A0A3N7G2Y1 (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_002G121800 PE=4 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 1.7e-06
Identity = 36/80 (45.00%), Postives = 46/80 (57.50%), Query Frame = 0

Query: 1  MRFFKFPAAGVKLRIMAVALLVLLISGENGEEKVVGLKEATPNEKERDRQVKEQRTIRSF 60
          M + + P   V  + M + LLVL +SG+  EE  V +     N++      K+QR   SF
Sbjct: 10 MHYQQSPRVFVLQKPMVILLLVLFVSGDRKEETTVNV-HGLQNQQPPSSTEKQQRLRHSF 69

Query: 61 DVFMSGKRKVPNASDPLHNR 81
          D F S KRKVPNASDPLHNR
Sbjct: 70 DTFFSSKRKVPNASDPLHNR 88

BLAST of Sgr003110 vs. ExPASy TrEMBL
Match: A0A061FFX3 (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_034761 PE=4 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 2.2e-06
Identity = 35/70 (50.00%), Postives = 45/70 (64.29%), Query Frame = 0

Query: 15 IMAVALLVLLISGENGEEK--VVGLKEATPNEKERD--RQVKEQRTIRSFDVFMSGKRKV 74
          ++ + LL LL+SG+  EE   +VG+   +P  KE+   RQ + QR    FD F S KRKV
Sbjct: 16 VVVIMLLSLLVSGDQKEESSVLVGMNGYSPGTKEKQPVRQQQHQRLRHHFDAFFSSKRKV 75

Query: 75 PNASDPLHNR 81
          PNASDPLHNR
Sbjct: 76 PNASDPLHNR 85

BLAST of Sgr003110 vs. ExPASy TrEMBL
Match: A0A5N5NQQ2 (Uncharacterized protein OS=Salix brachista OX=2182728 GN=DKX38_002684 PE=4 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 5.0e-06
Identity = 33/69 (47.83%), Postives = 45/69 (65.22%), Query Frame = 0

Query: 14 RIMAVALLVLLISGENGEEKVVGLKEATPNEKE--RDRQVKEQRTIRSFDVFMSGKRKVP 73
          +++ + LLVL ISG+  EEK V +     N++      + ++QR  RSFD F S KRKVP
Sbjct: 23 KLVVLILLVLFISGDQKEEKTVRIVHGLQNQQPPGSTEKQQQQRLRRSFDKFFSSKRKVP 82

Query: 74 NASDPLHNR 81
          NA+DPLHNR
Sbjct: 83 NAADPLHNR 91

BLAST of Sgr003110 vs. ExPASy TrEMBL
Match: A0A1J7I7E8 (Uncharacterized protein (Fragment) OS=Lupinus angustifolius OX=3871 GN=TanjilG_12929 PE=4 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 1.1e-05
Identity = 39/73 (53.42%), Postives = 44/73 (60.27%), Query Frame = 0

Query: 14 RIMAVALLVLLISGENGEEKVVGLKEATPNEKERD-RQVK-----EQRTIRSFDVFMSGK 73
          R++   LL  L+ GE  EE VVGL    PN +E+  RQ K     EQ     FDVF S K
Sbjct: 16 RVLFFVLLTFLVCGEK-EESVVGLSNQKPNTQEKQLRQKKLLQHQEQVPKYPFDVFASEK 75

Query: 74 RKVPNASDPLHNR 81
          RKVPNASDPLHNR
Sbjct: 76 RKVPNASDPLHNR 87

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
RQO86854.13.5e-0645.00hypothetical protein POPTR_002G121800 [Populus trichocarpa][more]
EOY15803.14.6e-0650.00Uncharacterized protein TCM_034761 [Theobroma cacao][more]
KAG6784477.11.0e-0543.75hypothetical protein POTOM_010173 [Populus tomentosa][more]
KAB5568891.11.0e-0547.83hypothetical protein DKX38_002684 [Salix brachista][more]
OIW14530.12.3e-0553.42hypothetical protein TanjilG_12929, partial [Lupinus angustifolius][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
F6GZW11.7e-0641.98Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_18s0001g09630 PE=4 SV=... [more]
A0A3N7G2Y11.7e-0645.00Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_002G121800 PE=4 ... [more]
A0A061FFX32.2e-0650.00Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_034761 PE=4 SV=1[more]
A0A5N5NQQ25.0e-0647.83Uncharacterized protein OS=Salix brachista OX=2182728 GN=DKX38_002684 PE=4 SV=1[more]
A0A1J7I7E81.1e-0553.42Uncharacterized protein (Fragment) OS=Lupinus angustifolius OX=3871 GN=TanjilG_1... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Monk fruit (Qingpiguo) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR039316CLAVATA3/ESR (CLE)-related protein 25/26PANTHERPTHR34277CLAVATA3/ESR (CLE)-RELATED PROTEIN 26coord: 3..80
NoneNo IPR availablePANTHERPTHR34277:SF1CLAVATA3/ESR (CLE) GENE FAMILY MEMBER MTCLE20coord: 3..80

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sgr003110.1Sgr003110.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0045168 cell-cell signaling involved in cell fate commitment