Sed0028169 (gene) Chayote v1

Overview


Name	Sed0028169
Type	gene
Organism	Sechium edule (Chayote v1)
Description	protein SODIUM POTASSIUM ROOT DEFECTIVE 3-like
Location	LG14: 4550798 .. 4553840 (+)
RNA-Seq Expression	Sed0028169
Synteny	Sed0028169

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCAACAAGAAAAACATATTTGTTAAAAATCTATCTTTTTCTTTCTCTTTCTCAACCACACACACAAAAACAAATACACCAAATCTTAAAAATCTCATTTTATCCAAAAAATAATCTCATTTTCTTTCATCATCATTATGAAAACTTTAGAGTTTCTGTGCGCCTCCCAAGCCTCCACCGCCGTGTCTCTTCCCACCGGCGACCAAGCCCCGCCTCCTTCCGCCGCCGGAAGAGAGATCGACCGCCACAACCCATTAATCTCCGACGGAAAGAGAACCACAGCTTCCAGAAGTTTCCCCAATATTCCTCCATGTTCTTCCCACTATTCCCCCATCAATCCTCTCCCTTACCACCAACTTTCCGCCGCCGCCTCCCCCAATCTCGCCGCCGGCCAGATCGGCTCCGGCGACTCTATGGGGCTGAAGAAGAAAAAGAAAAGCTCCTCAATTATTAGAGCTGACATTGCCAGGTTTGTCTTTTATTAACTTATTCATTTTCTTTTATTTTACTTTTAGTACATTTATTATTTATTGGGATTTTAGATTCTTTTTAAGCGAAATTTAAGATGCATGTGTCAATGGGATTTTGCATGTATAACAAAAAAAGGTAAAATATTTTCATCTATAGCACAAAATCTAAAATAATTTTATTTGTAGCAGAAAATTCAAATTGATTTCTATCACTTGTTGAGTTCTATTAGTGATAGAATTTAATCAATGATAAATTTATTCTATCACTCTTTAAGTTTTCTATCAGTGATAGAAATCTAAATTGAGTTCTATCACTAGGTGAGTGATAGACTATCACTAGGTGAGTGATAGAAATAAATATGCTATAGATGAATTATTTTAAAAATTATGCTACAAATATAATAGAAGAGGTAGAATGTGCTGCTGGTAAATTCTCATCTTAAAATTTATTCAAACTATAAATTGTTTATATACATTTTAGCTGCATTTTTTTTCGCTTTCGGTTTGAATTCAAAATCTTATATATTTACACCCAGCTATCATTTTTTTTTTAATATTTGATGTTGATAGCACATTCATGTTTTTTTAGAAAAACATCTATTAGTTTTAATTTTTTTAAAAATAATTTCAAATTTCATATGAATGAAATTTATCTAATTTAACTCATCAAATTTTTTATTATTATTATATTTGAGTTTTTTTCTAAAATTTTAACATTCTTAAAGGAATCAGTGAAAAATCCCTTTTTTAATAAAACAATATTTGAAAAAAAAAAAAGAGACCTCAATCCCTAATTTTATAATTATATATTATATATATATTTATTTATTCCAATAAAAATATTTTGATAGAGAAGTCTTGAACTTATAATCTTACAATTATTGGATAGGAACTTATAACATTGTTAGATATAGATTTTTTTTTGAAAGCTTGTTGGATATAGATTTAATCTTTTACAAAAGAGTAAAGAGGGAAACTAGAATACTTTAGATCTATTTGGGAATTTATTTAAGTATAATTTATTTAGGTTTTAATTTTCTTTTTTTGAGAAATTATTTAGGTTTTAATTAGATTATTCATTTTAAATGCATGATAAATTAATGATATATTTGAATTTTAATAATTGGGTCATAAATATAAATATTTTGATTTTGTTTGGGCTCTTAGGTGGAGTTGTGGGAAGCCTACTAATTTGTCAACGCCTCCGGGCTCGATGCGGTTCCTTTTGAACGACAAGTCGTTTCGTGATGGGTCGACGGATCGGGTTTCCACATCTATCCTTTCAACTGAAACTAACCAAAAAGTAATTAATTCAGAGATTTTGGAATGCAAAACATCTCCACCTTCCAACCAGGTTAGTCATTTTCAACCTATATCCAAAAACACACTACAAATAACACTTTTTTGTTTCATAAATAAAATCAACAAGTTACATATTCAAATATTTGTGTTGTATACACAAATAATGTTATGCTTGTTATAACAAGTATAATTTAATTGACATAAAATTTATACTATCAAGACTCGAAATTAGAATTTCAAAATTTATCGAGAGTCAATGACGCAATTGATTATCTAGTCTGGTGTTAATCCATTTCAATTCTACAATGGGCATTACTCTCAACCTAACTAAATTTCAAAAAAAAAAACTCGAAATTAAAGATTTGTTTCGTATTATAAATGGGCATTACTCTCAACCCAACTAAAAAAGCTATTCGATAGAAAGAAAAAATATATATATCTTTCTTCTATTTTTGAAATTAATTGTCAAAATAAAAAATATTAATTAATTTTTTTTGGTATGTTTTAATGACATCTCCCACTCTCTCAGGTTGTGGTTTTGAGGGTATCATTGCACTGCAGAGGCTGTGAAGGAAAACTGAGGAAACACCTTTCAAAAATGGAAGGTAAGAAATGGAAAATAGCAGCCTAATATTTTTTTCTTTTTTGGTAAATTTATTTATTTATAATTAAATGGCGATACAATCTTAATTAGTTTAAAATGATACTCCAAAATGGTCAAGAGTTTCAATGCCATTTTGTATGGCCAAATAATCGAGAAGGAAGACTCGAATCTATGATCGCTAATCTTAGTTATTGTCAATATTTAGCAGAAAACTGTTGAACTGATTGTAAGTCATTAGTAATGGTTTATTACAAAAATTTATTTTTTCCAATAATTTTTCAATACAATTTGATAAAAAAAAAATGATAAAAAAAGAAGGGGCAAAACTCAAGTAAAAATTTGTATAATGAATTCTAATGTTGTATAATTGGTTTGAAAATGCAGGGGTCAACTCCTTCACCATAGACTTTGCAGCCAAAAAGGTTACAATAATGGGAAATATTACACCACAAGGTGTGTTGGAAAGTGTAGCTAAGGTTAAAAATGCCCAATTTTGGCCATCCCTTCCTTCCAAACCCTAATCATCATCATCAACCAAATGTATTGAACCAAGTCCCATCCATGACTATTTTGTTTTGAGCTTTCAATTTTTTATATTAAGTTTGTTTATTGATTATTTTTATTTAGTAATGTAATTTCTAGCTAGAAACATGAAATTTGTTTGCCAA

mRNA sequence

GCAACAAGAAAAACATATTTGTTAAAAATCTATCTTTTTCTTTCTCTTTCTCAACCACACACACAAAAACAAATACACCAAATCTTAAAAATCTCATTTTATCCAAAAAATAATCTCATTTTCTTTCATCATCATTATGAAAACTTTAGAGTTTCTGTGCGCCTCCCAAGCCTCCACCGCCGTGTCTCTTCCCACCGGCGACCAAGCCCCGCCTCCTTCCGCCGCCGGAAGAGAGATCGACCGCCACAACCCATTAATCTCCGACGGAAAGAGAACCACAGCTTCCAGAAGTTTCCCCAATATTCCTCCATGTTCTTCCCACTATTCCCCCATCAATCCTCTCCCTTACCACCAACTTTCCGCCGCCGCCTCCCCCAATCTCGCCGCCGGCCAGATCGGCTCCGGCGACTCTATGGGGCTGAAGAAGAAAAAGAAAAGCTCCTCAATTATTAGAGCTGACATTGCCAGGTGGAGTTGTGGGAAGCCTACTAATTTGTCAACGCCTCCGGGCTCGATGCGGTTCCTTTTGAACGACAAGTCGTTTCGTGATGGGTCGACGGATCGGGTTTCCACATCTATCCTTTCAACTGAAACTAACCAAAAAGTAATTAATTCAGAGATTTTGGAATGCAAAACATCTCCACCTTCCAACCAGGTTGTGGTTTTGAGGGTATCATTGCACTGCAGAGGCTGTGAAGGAAAACTGAGGAAACACCTTTCAAAAATGGAAGGGGTCAACTCCTTCACCATAGACTTTGCAGCCAAAAAGGTTACAATAATGGGAAATATTACACCACAAGGTGTGTTGGAAAGTGTAGCTAAGGTTAAAAATGCCCAATTTTGGCCATCCCTTCCTTCCAAACCCTAATCATCATCATCAACCAAATGTATTGAACCAAGTCCCATCCATGACTATTTTGTTTTGAGCTTTCAATTTTTTATATTAAGTTTGTTTATTGATTATTTTTATTTAGTAATGTAATTTCTAGCTAGAAACATGAAATTTGTTTGCCAA

Coding sequence (CDS)

ATGAAAACTTTAGAGTTTCTGTGCGCCTCCCAAGCCTCCACCGCCGTGTCTCTTCCCACCGGCGACCAAGCCCCGCCTCCTTCCGCCGCCGGAAGAGAGATCGACCGCCACAACCCATTAATCTCCGACGGAAAGAGAACCACAGCTTCCAGAAGTTTCCCCAATATTCCTCCATGTTCTTCCCACTATTCCCCCATCAATCCTCTCCCTTACCACCAACTTTCCGCCGCCGCCTCCCCCAATCTCGCCGCCGGCCAGATCGGCTCCGGCGACTCTATGGGGCTGAAGAAGAAAAAGAAAAGCTCCTCAATTATTAGAGCTGACATTGCCAGGTGGAGTTGTGGGAAGCCTACTAATTTGTCAACGCCTCCGGGCTCGATGCGGTTCCTTTTGAACGACAAGTCGTTTCGTGATGGGTCGACGGATCGGGTTTCCACATCTATCCTTTCAACTGAAACTAACCAAAAAGTAATTAATTCAGAGATTTTGGAATGCAAAACATCTCCACCTTCCAACCAGGTTGTGGTTTTGAGGGTATCATTGCACTGCAGAGGCTGTGAAGGAAAACTGAGGAAACACCTTTCAAAAATGGAAGGGGTCAACTCCTTCACCATAGACTTTGCAGCCAAAAAGGTTACAATAATGGGAAATATTACACCACAAGGTGTGTTGGAAAGTGTAGCTAAGGTTAAAAATGCCCAATTTTGGCCATCCCTTCCTTCCAAACCCTAA

Protein sequence

MKTLEFLCASQASTAVSLPTGDQAPPPSAAGREIDRHNPLISDGKRTTASRSFPNIPPCSSHYSPINPLPYHQLSAAASPNLAAGQIGSGDSMGLKKKKKSSSIIRADIARWSCGKPTNLSTPPGSMRFLLNDKSFRDGSTDRVSTSILSTETNQKVINSEILECKTSPPSNQVVVLRVSLHCRGCEGKLRKHLSKMEGVNSFTIDFAAKKVTIMGNITPQGVLESVAKVKNAQFWPSLPSKP

Homology

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BLAST of Sed0028169 vs. NCBI nr
Match: XP_023543184.1 (protein SODIUM POTASSIUM ROOT DEFECTIVE 3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 339.3 bits (869), Expect = 2.7e-89
Identity = 187/261 (71.65%), Postives = 208/261 (79.69%), Query Frame = 0


Query: 1   MKTLEFLCASQASTAVSLPTGDQAPPPSAAGREIDRHNPLISDGKRT-TASRSFPNIPPC 60
           MKT+  LCASQASTAVSLPT +Q     A GR IDRHNP+I+DG+R+ T SR+FPN PPC
Sbjct: 1   MKTINLLCASQASTAVSLPTAEQPSSTPAVGRAIDRHNPIIADGRRSVTTSRTFPN-PPC 60

Query: 61  SSHYSPINPLPYHQL----SAAASPNLAAGQIGSGDS----MGL-KKKKKSSSIIRADIA 120
           SS YSPINPLPYHQL    SAAA+PNLAA QI SG S     GL KKKKK SSII  D  
Sbjct: 61  SSQYSPINPLPYHQLHPAASAAATPNLAADQIRSGGSATTHKGLKKKKKKGSSIISTDFV 120

Query: 121 RWSCGKPTNLSTPPGSMRFLLNDKSFRDGSTDRVSTSILSTETNQKVIN----------- 180
           RWSC KP++L+TPPGSMR+LLNDKS RDGSTDR+STSILS++TN K  +           
Sbjct: 121 RWSCAKPSDLATPPGSMRYLLNDKSVRDGSTDRLSTSILSSQTNNKPDSGTENRDESKPT 180

Query: 181 SEIL---ECKTSPPSNQVVVLRVSLHCRGCEGKLRKHLSKMEGVNSFTIDFAAKKVTIMG 238
           +EIL   +CK+SPPSN VVVLRVSLHCRGCEGKLRKHLSKMEGVNSF IDFAAKKVTIMG
Sbjct: 181 AEILLEDDCKSSPPSNHVVVLRVSLHCRGCEGKLRKHLSKMEGVNSFNIDFAAKKVTIMG 240

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BLAST of Sed0028169 vs. NCBI nr
Match: XP_022977250.1 (protein SODIUM POTASSIUM ROOT DEFECTIVE 3-like [Cucurbita maxima])

HSP 1 Score: 333.6 bits (854), Expect = 1.5e-87
Identity = 185/261 (70.88%), Postives = 206/261 (78.93%), Query Frame = 0


Query: 1   MKTLEFLCASQASTAVSLPTGDQAPPPSAAGREIDRHNPLISDGKRT-TASRSFPNIPPC 60
           MKT+  LCASQASTAVSLPT +Q     A GR IDRHNP+I+DG+R+ T SR+FPN PPC
Sbjct: 1   MKTINLLCASQASTAVSLPTAEQPSSTPAVGRAIDRHNPIIADGRRSVTTSRTFPN-PPC 60

Query: 61  SSHYSPINPLPYHQL---SAAASPNLAAGQIGSGDS---MGLKKKKK---SSSIIRADIA 120
           SS YSPINPLPYHQL   +AAA+PNL A QI SGDS    GLKKKKK    SSII  D  
Sbjct: 61  SSQYSPINPLPYHQLHPAAAAATPNLTADQIHSGDSATHKGLKKKKKKKMGSSIISTDFV 120

Query: 121 RWSCGKPTNLSTPPGSMRFLLNDKSFRDGSTDRVSTSILSTETNQKVIN----------- 180
           RWSC KP +L+TP GSMR+LLNDKS RDGSTDR+STSILS++TN K  +           
Sbjct: 121 RWSCVKPRDLATPLGSMRYLLNDKSVRDGSTDRLSTSILSSQTNNKPDSGTENRDESKPT 180

Query: 181 SEIL---ECKTSPPSNQVVVLRVSLHCRGCEGKLRKHLSKMEGVNSFTIDFAAKKVTIMG 238
           +EIL   +CK+SPPSN VVVLRVSLHCRGCEGKLRKHLSKMEGVNSF IDFAAKKVTIMG
Sbjct: 181 AEILLEDDCKSSPPSNHVVVLRVSLHCRGCEGKLRKHLSKMEGVNSFNIDFAAKKVTIMG 240

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BLAST of Sed0028169 vs. NCBI nr
Match: KAG7033858.1 (Protein SODIUM POTASSIUM ROOT DEFECTIVE 3, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 331.3 bits (848), Expect = 7.2e-87
Identity = 183/256 (71.48%), Postives = 204/256 (79.69%), Query Frame = 0


Query: 1   MKTLEFLCASQASTAVSLPTGDQAPPPSAAGREIDRHNPLISDGKRT-TASRSFPNIPPC 60
           MKT+  LCASQASTAVSLPT +Q     A GR IDRHNP+I+DG+R+ T SR+FPN PPC
Sbjct: 1   MKTINLLCASQASTAVSLPTAEQPSSTPAVGRAIDRHNPIIADGRRSVTTSRTFPN-PPC 60

Query: 61  SSHYSPINPLPYHQLSAAASPNLAAGQIGSGDS---MGL-KKKKKSSSIIRADIARWSCG 120
           SS YSPINPLPYHQL  AA+   AA QI SG S    GL KKKKKSSSII  D  RWSC 
Sbjct: 61  SSQYSPINPLPYHQLHPAAAA-AAADQIRSGGSATHKGLKKKKKKSSSIISTDFVRWSCA 120

Query: 121 KPTNLSTPPGSMRFLLNDKSFRDGSTDRVSTSILSTETNQKVIN-----------SEIL- 180
           KP++L+TPPGSMR+LLNDKS RDGSTDR+STSILS++TN K  +           +EIL 
Sbjct: 121 KPSDLATPPGSMRYLLNDKSVRDGSTDRLSTSILSSQTNNKPDSGTENRDESKPTAEILL 180

Query: 181 --ECKTSPPSNQVVVLRVSLHCRGCEGKLRKHLSKMEGVNSFTIDFAAKKVTIMGNITPQ 238
             +CK+SPPSN VVVLRVSLHCRGCEGKLRKHLSKMEGVNSF IDFAAKKVTIMGNITP+
Sbjct: 181 EDDCKSSPPSNHVVVLRVSLHCRGCEGKLRKHLSKMEGVNSFNIDFAAKKVTIMGNITPE 240

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BLAST of Sed0028169 vs. NCBI nr
Match: KAG6603681.1 (Protein SODIUM POTASSIUM ROOT DEFECTIVE 3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 328.2 bits (840), Expect = 6.1e-86
Identity = 177/252 (70.24%), Postives = 200/252 (79.37%), Query Frame = 0


Query: 1   MKTLEFLCASQASTAVSLPTGDQAPPPSAAGREIDRHNPLISDGKRT-TASRSFPNIPPC 60
           MKT+  LCASQASTAVSLPT +Q     A GR IDRHNP+I+DG+R+ T SR+FPN PPC
Sbjct: 1   MKTINLLCASQASTAVSLPTAEQPSSTPAVGRAIDRHNPIIADGRRSVTTSRTFPN-PPC 60

Query: 61  SSHYSPINPLPYHQLSAAASPNLAAGQIGSGDSMGL-KKKKKSSSIIRADIARWSCGKPT 120
           SS YSPINPLPYHQL  AA+  + +G  GS    GL KKKKK SSII  D  RWSC KP+
Sbjct: 61  SSQYSPINPLPYHQLHPAAADQIRSG--GSATHKGLKKKKKKGSSIISTDFVRWSCAKPS 120

Query: 121 NLSTPPGSMRFLLNDKSFRDGSTDRVSTSILSTETNQKVIN-----------SEIL---E 180
           +L+TPPGSMR+LLNDKS RDGSTDR+STSILS++TN K  +           +EIL   +
Sbjct: 121 DLATPPGSMRYLLNDKSVRDGSTDRLSTSILSSQTNNKPDSGTENRDESKPTAEILLEDD 180

Query: 181 CKTSPPSNQVVVLRVSLHCRGCEGKLRKHLSKMEGVNSFTIDFAAKKVTIMGNITPQGVL 237
           CK+SPPSN VVVLRVSLHCRGCEGKLRKHLSKMEGVNSF IDFAAKKVTIMGNITP+GVL
Sbjct: 181 CKSSPPSNHVVVLRVSLHCRGCEGKLRKHLSKMEGVNSFNIDFAAKKVTIMGNITPEGVL 240

[Close]

BLAST of Sed0028169 vs. NCBI nr
Match: XP_022950246.1 (protein SODIUM POTASSIUM ROOT DEFECTIVE 3-like [Cucurbita moschata])

HSP 1 Score: 324.7 bits (831), Expect = 6.8e-85
Identity = 180/256 (70.31%), Postives = 201/256 (78.52%), Query Frame = 0


Query: 1   MKTLEFLCASQASTAVSLPTGDQAPPPSAAGREIDRHNPLISDGKRT-TASRSFPNIPPC 60
           MKT+  LCASQASTAVSLPT +Q     A GR IDRHNP+I+DG+R+ T SR+FPN PPC
Sbjct: 1   MKTINLLCASQASTAVSLPTAEQPSSTPAVGRAIDRHNPIIADGRRSVTTSRTFPN-PPC 60

Query: 61  SSHYSPINPLPYHQLSAAASPNLAAGQIGSGDS---MGL-KKKKKSSSIIRADIARWSCG 120
           SS YSPINPLPYHQL  AA+   AA QI SG S    GL KKKKK SSII  D  RWSC 
Sbjct: 61  SSQYSPINPLPYHQLHPAAA---AADQIRSGGSATHKGLKKKKKKGSSIISTDFVRWSCA 120

Query: 121 KPTNLSTPPGSMRFLLNDKSFRDGSTDRVSTSILSTETNQKVIN-----------SEIL- 180
           KP++L+TPPGSMR+LLNDKS  DGSTDR+STSILS++TN K  +           +EIL 
Sbjct: 121 KPSDLATPPGSMRYLLNDKSVPDGSTDRLSTSILSSQTNNKPDSGTENRDESKPTAEILL 180

Query: 181 --ECKTSPPSNQVVVLRVSLHCRGCEGKLRKHLSKMEGVNSFTIDFAAKKVTIMGNITPQ 238
             +CK+SPP N VVVLRVSLHCRGCEGKLRKHLSKMEGVNSF IDFAAKKVTIMGNITP+
Sbjct: 181 EDDCKSSPPFNHVVVLRVSLHCRGCEGKLRKHLSKMEGVNSFNIDFAAKKVTIMGNITPE 240

[Close]

BLAST of Sed0028169 vs. ExPASy Swiss-Prot
Match: Q8RXH8 (Protein SODIUM POTASSIUM ROOT DEFECTIVE 3 OS=Arabidopsis thaliana OX=3702 GN=NAKR3 PE=2 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 1.5e-34
Identity = 115/259 (44.40%), Postives = 148/259 (57.14%), Query Frame = 0


Query: 1   MKTLEFLCASQASTAVSLPTGDQAPPPSAAGREIDRHNPLISDGKRTTASRSFPNIPPCS 60
           MK   F CASQASTA +   G++    +   R IDRHNP+I DG+R+  +       PCS
Sbjct: 1   MKAGMFYCASQASTATA--NGER----TVTARAIDRHNPIIKDGRRSFTA-------PCS 60

Query: 61  SHYSPINPLPYHQLSAAASPNLAAGQIGSGDSMGLKKKKKSSS-----IIRADI--ARWS 120
           S    +   PY QLS            G G S+ + K ++S+S     +I  D+  AR S
Sbjct: 61  SGDDYV--APYRQLSKITR---VPSSSGDGKSVQVDKGRRSNSGSLMKLISYDVSLARKS 120

Query: 121 CG-KPTNLSTPPGSMRFLL-NDKSFRDGST--DRVSTSILSTETNQKVINSEILECKTS- 180
            G       TPPGS R+LL +D     GST  D V+T        ++  +  + E K S 
Sbjct: 121 FGCVVATPKTPPGSTRYLLGSDPVSLAGSTGQDTVATEESEASAPKRGSSGPVEEKKKSS 180

Query: 181 -PPSNQVVVLRVSL--HCRGCEGKLRKHLSKMEGVNSFTIDFAAKKVTIMGNITPQGVLE 240
              S+QVVVLRVSL  HCRGC+GK++KHLSKM+GV SF IDFA+KKVT+ G+ITP  VL 
Sbjct: 181 GSGSDQVVVLRVSLHCHCRGCQGKVKKHLSKMQGVTSFNIDFASKKVTVTGDITPLEVLG 240

Query: 241 SVAKVKNAQFW-PSLPSKP 244
            ++KVKNAQFW P  PS P
Sbjct: 241 CLSKVKNAQFWTPPPPSIP 241

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BLAST of Sed0028169 vs. ExPASy Swiss-Prot
Match: Q58FZ0 (Protein SODIUM POTASSIUM ROOT DEFECTIVE 2 OS=Arabidopsis thaliana OX=3702 GN=NAKR2 PE=2 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 1.5e-31
Identity = 103/256 (40.23%), Postives = 139/256 (54.30%), Query Frame = 0


Query: 8   CASQASTAV--------SLPTGDQAPPPSAAGREIDRHNPLISDGKRTTASRSFPNIPPC 67
           CASQASTA+           T D+    S  GR IDRHNP+I DG+R+ A   F  +P  
Sbjct: 7   CASQASTAICSSMDHVHKSTTTDEDERNS--GRAIDRHNPIIKDGRRSFAD-DFIKLPTS 66

Query: 68  SSHYSPIN-PLPYHQLSAAASPNLAAGQIGSGDSMGLKK--------KKKSSSIIRADIA 127
           +      N  L  ++   + +   + G  G G +  L K         +KS S     +A
Sbjct: 67  AEDGEMSNKKLEIYKGRRSITGRRSTGGGGGGGAAALLKLITNDIGLARKSFSC----VA 126

Query: 128 RWSCGKPTNLSTPPGSMRFLL-NDKSFRDGSTDRVSTSILSTET---NQKVINSEILECK 187
           R +C     + TP GS R+LL +D     GS D+     +  E      K +  +   C 
Sbjct: 127 RPACDL---IKTPVGSTRYLLGSDPDSITGSVDQDPAKTVEAEAPAGEDKTLTEKKTTC- 186

Query: 188 TSPPSNQVVVLRVSLHCRGCEGKLRKHLSKMEGVNSFTIDFAAKKVTIMGNITPQGVLES 241
                 QVVVL+VSLHCRGCEGK+RKHL++M+GV SF IDFAAKKVT+ G+ITP  +L+S
Sbjct: 187 -GDTDQQVVVLKVSLHCRGCEGKVRKHLARMQGVTSFNIDFAAKKVTVTGDITPLEILDS 246

[Close]

BLAST of Sed0028169 vs. ExPASy Swiss-Prot
Match: Q8LDS4 (Protein SODIUM POTASSIUM ROOT DEFECTIVE 1 OS=Arabidopsis thaliana OX=3702 GN=NAKR1 PE=1 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 1.4e-29
Identity = 111/333 (33.33%), Postives = 143/333 (42.94%), Query Frame = 0


Query: 7   LCASQASTAVSLPTGDQAPPPSAA--------GREIDRHNPLISDGKRTTASRSFPNIPP 66
           LCASQAST     T DQ   PS++        GR IDRHNP+I DG+R T   S PN+ P
Sbjct: 2   LCASQASTTTLCSTMDQTSQPSSSSSATIRLGGRAIDRHNPIIRDGRRLTPPPS-PNLNP 61

Query: 67  CSSHYSPINPLPYHQLSAAASPNLAAGQIGSGDSMGLKKKKKSSSIIRADIARWSCGKPT 126
            SS  S      YH      +P +    + S +   L K+K          +  SC    
Sbjct: 62  SSSSSS-----TYH------TPLMTRLGLESSEQKRLAKRKSKKGDSDVGKSPVSC---F 121

Query: 127 NLSTPPGSMRFLLNDKSFRDGSTDR---------------------------------VS 186
           +  TP GS R+LL++  F DG  D                                  +S
Sbjct: 122 SSDTPQGSSRYLLSNPVFFDGFVDSDPIPIPIDEPEITKADDLNNFHEDRLIINASKYLS 181

Query: 187 TSILSTETNQ-------------------------------------KVINSEILECKTS 243
           TS    E  Q                                     K ++S   +    
Sbjct: 182 TSASFLEKKQPDFFEGFLDYEPVLSPDNPFSEPTKASPTASLSSLEDKDVSSPDFKFSPP 241

[Close]

BLAST of Sed0028169 vs. ExPASy Swiss-Prot
Match: Q94BT9 (Copper transport protein ATX1 OS=Arabidopsis thaliana OX=3702 GN=ATX1 PE=1 SV=2)

HSP 1 Score: 70.9 bits (172), Expect = 2.3e-11
Identity = 32/66 (48.48%), Postives = 44/66 (66.67%), Query Frame = 0


Query: 172 NQVVVLRVSLHCRGCEGKLRKHLSKMEGVNSFTIDFAAKKVTIMGNITPQGVLESVAKV- 231
           +Q VVLRV++ C GC G +++ L KMEGV SF +D   +KVT+ GN+ P  VL++V K  
Sbjct: 2   SQTVVLRVAMTCEGCVGAVKRVLGKMEGVESFDVDIKEQKVTVKGNVQPDAVLQTVTKTG 61

Query: 232 KNAQFW 237
           K   FW
Sbjct: 62  KKTAFW 67

[Close]

BLAST of Sed0028169 vs. ExPASy Swiss-Prot
Match: O82089 (Copper transport protein CCH OS=Arabidopsis thaliana OX=3702 GN=CCH PE=1 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 3.0e-11
Identity = 31/66 (46.97%), Postives = 44/66 (66.67%), Query Frame = 0


Query: 173 QVVVLRVSLHCRGCEGKLRKHLSKMEGVNSFTIDFAAKKVTIMGNITPQGVLESVAKV-K 232
           Q VVL+V + C+GC G + + L KMEGV SF ID   +KVT+ GN+ P+ V ++V+K  K
Sbjct: 3   QTVVLKVGMSCQGCVGAVNRVLGKMEGVESFDIDIKEQKVTVKGNVEPEAVFQTVSKTGK 62

Query: 233 NAQFWP 238
              +WP
Sbjct: 63  KTSYWP 68

[Close]

BLAST of Sed0028169 vs. ExPASy TrEMBL
Match: A0A6J1ILS7 (protein SODIUM POTASSIUM ROOT DEFECTIVE 3-like OS=Cucurbita maxima OX=3661 GN=LOC111477619 PE=4 SV=1)

HSP 1 Score: 333.6 bits (854), Expect = 7.0e-88
Identity = 185/261 (70.88%), Postives = 206/261 (78.93%), Query Frame = 0


Query: 1   MKTLEFLCASQASTAVSLPTGDQAPPPSAAGREIDRHNPLISDGKRT-TASRSFPNIPPC 60
           MKT+  LCASQASTAVSLPT +Q     A GR IDRHNP+I+DG+R+ T SR+FPN PPC
Sbjct: 1   MKTINLLCASQASTAVSLPTAEQPSSTPAVGRAIDRHNPIIADGRRSVTTSRTFPN-PPC 60

Query: 61  SSHYSPINPLPYHQL---SAAASPNLAAGQIGSGDS---MGLKKKKK---SSSIIRADIA 120
           SS YSPINPLPYHQL   +AAA+PNL A QI SGDS    GLKKKKK    SSII  D  
Sbjct: 61  SSQYSPINPLPYHQLHPAAAAATPNLTADQIHSGDSATHKGLKKKKKKKMGSSIISTDFV 120

Query: 121 RWSCGKPTNLSTPPGSMRFLLNDKSFRDGSTDRVSTSILSTETNQKVIN----------- 180
           RWSC KP +L+TP GSMR+LLNDKS RDGSTDR+STSILS++TN K  +           
Sbjct: 121 RWSCVKPRDLATPLGSMRYLLNDKSVRDGSTDRLSTSILSSQTNNKPDSGTENRDESKPT 180

Query: 181 SEIL---ECKTSPPSNQVVVLRVSLHCRGCEGKLRKHLSKMEGVNSFTIDFAAKKVTIMG 238
           +EIL   +CK+SPPSN VVVLRVSLHCRGCEGKLRKHLSKMEGVNSF IDFAAKKVTIMG
Sbjct: 181 AEILLEDDCKSSPPSNHVVVLRVSLHCRGCEGKLRKHLSKMEGVNSFNIDFAAKKVTIMG 240

[Close]

BLAST of Sed0028169 vs. ExPASy TrEMBL
Match: A0A6J1GEB0 (protein SODIUM POTASSIUM ROOT DEFECTIVE 3-like OS=Cucurbita moschata OX=3662 GN=LOC111453393 PE=4 SV=1)

HSP 1 Score: 324.7 bits (831), Expect = 3.3e-85
Identity = 180/256 (70.31%), Postives = 201/256 (78.52%), Query Frame = 0


Query: 1   MKTLEFLCASQASTAVSLPTGDQAPPPSAAGREIDRHNPLISDGKRT-TASRSFPNIPPC 60
           MKT+  LCASQASTAVSLPT +Q     A GR IDRHNP+I+DG+R+ T SR+FPN PPC
Sbjct: 1   MKTINLLCASQASTAVSLPTAEQPSSTPAVGRAIDRHNPIIADGRRSVTTSRTFPN-PPC 60

Query: 61  SSHYSPINPLPYHQLSAAASPNLAAGQIGSGDS---MGL-KKKKKSSSIIRADIARWSCG 120
           SS YSPINPLPYHQL  AA+   AA QI SG S    GL KKKKK SSII  D  RWSC 
Sbjct: 61  SSQYSPINPLPYHQLHPAAA---AADQIRSGGSATHKGLKKKKKKGSSIISTDFVRWSCA 120

Query: 121 KPTNLSTPPGSMRFLLNDKSFRDGSTDRVSTSILSTETNQKVIN-----------SEIL- 180
           KP++L+TPPGSMR+LLNDKS  DGSTDR+STSILS++TN K  +           +EIL 
Sbjct: 121 KPSDLATPPGSMRYLLNDKSVPDGSTDRLSTSILSSQTNNKPDSGTENRDESKPTAEILL 180

Query: 181 --ECKTSPPSNQVVVLRVSLHCRGCEGKLRKHLSKMEGVNSFTIDFAAKKVTIMGNITPQ 238
             +CK+SPP N VVVLRVSLHCRGCEGKLRKHLSKMEGVNSF IDFAAKKVTIMGNITP+
Sbjct: 181 EDDCKSSPPFNHVVVLRVSLHCRGCEGKLRKHLSKMEGVNSFNIDFAAKKVTIMGNITPE 240

[Close]

BLAST of Sed0028169 vs. ExPASy TrEMBL
Match: A0A5A7TZF0 (HMA domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold908G001570 PE=4 SV=1)

HSP 1 Score: 306.6 bits (784), Expect = 9.2e-80
Identity = 172/264 (65.15%), Postives = 195/264 (73.86%), Query Frame = 0


Query: 1   MKTLEFLCASQASTAVSLPTGDQAPPPSAAGREIDRHNPLISDGKRT--TASRSFPNIPP 60
           MKT++F CASQASTAV  P+   A   +AAGR IDRHNP+I+DG+R+  T+  +FPN PP
Sbjct: 1   MKTIDFFCASQASTAVDQPSSTPA-TVAAAGRFIDRHNPIIADGRRSNVTSRTNFPN-PP 60

Query: 61  CSSHYSPINPLPYHQLSAAASPNLAAGQIGSGDSMGLKKK------KKSSSIIRADIARW 120
           CSS YSPINPLPYHQL AAASPN+A  QI S +   LK K      KKSSSI+  D  RW
Sbjct: 61  CSSQYSPINPLPYHQLHAAASPNVAGDQIRSENHKDLKMKKKKKKIKKSSSIVTTDFVRW 120

Query: 121 SCGKPTNLSTPPGSMRFLLNDKSFRDGSTDRVSTSI-----LSTETNQ--------KVIN 180
           SC KP++L+TPPGSMR+LLNDKS RDGS DR+ST I     L+    Q          I+
Sbjct: 121 SCAKPSDLATPPGSMRYLLNDKSVRDGSMDRISTPIPIHKNLTPSDQQHPHQPQPTPQIS 180

Query: 181 SEILECKTSPPSNQVVVLRVSLHCRGCEGKLRKHLSKMEGVNSFTIDFAAKKVTIMGNIT 240
           S+   C  SPPSNQVVVLRVSLHCRGCEGKLRKHLSKMEGVNSF IDFAAKKVTIMGNIT
Sbjct: 181 SDD-HCNKSPPSNQVVVLRVSLHCRGCEGKLRKHLSKMEGVNSFNIDFAAKKVTIMGNIT 240

Query: 241 PQGVLESVAKVKNAQFWPSLPSKP 244
           PQG+LESV+KVKNAQFWP     P
Sbjct: 241 PQGMLESVSKVKNAQFWPYADPTP 261

[Close]

BLAST of Sed0028169 vs. ExPASy TrEMBL
Match: A0A1S3BIC7 (uncharacterized protein LOC103489885 OS=Cucumis melo OX=3656 GN=LOC103489885 PE=4 SV=1)

HSP 1 Score: 306.6 bits (784), Expect = 9.2e-80
Identity = 172/264 (65.15%), Postives = 195/264 (73.86%), Query Frame = 0


Query: 1   MKTLEFLCASQASTAVSLPTGDQAPPPSAAGREIDRHNPLISDGKRT--TASRSFPNIPP 60
           MKT++F CASQASTAV  P+   A   +AAGR IDRHNP+I+DG+R+  T+  +FPN PP
Sbjct: 1   MKTIDFFCASQASTAVDQPSSTPA-TVAAAGRFIDRHNPIIADGRRSNVTSRTNFPN-PP 60

Query: 61  CSSHYSPINPLPYHQLSAAASPNLAAGQIGSGDSMGLKKK------KKSSSIIRADIARW 120
           CSS YSPINPLPYHQL AAASPN+A  QI S +   LK K      KKSSSI+  D  RW
Sbjct: 61  CSSQYSPINPLPYHQLHAAASPNVAGDQIRSENHKDLKMKKKKKKIKKSSSIVTTDFVRW 120

Query: 121 SCGKPTNLSTPPGSMRFLLNDKSFRDGSTDRVSTSI-----LSTETNQ--------KVIN 180
           SC KP++L+TPPGSMR+LLNDKS RDGS DR+ST I     L+    Q          I+
Sbjct: 121 SCAKPSDLATPPGSMRYLLNDKSVRDGSMDRISTPIPIHKNLTPSDQQHPHQPQPTPQIS 180

Query: 181 SEILECKTSPPSNQVVVLRVSLHCRGCEGKLRKHLSKMEGVNSFTIDFAAKKVTIMGNIT 240
           S+   C  SPPSNQVVVLRVSLHCRGCEGKLRKHLSKMEGVNSF IDFAAKKVTIMGNIT
Sbjct: 181 SDD-HCNKSPPSNQVVVLRVSLHCRGCEGKLRKHLSKMEGVNSFNIDFAAKKVTIMGNIT 240

Query: 241 PQGVLESVAKVKNAQFWPSLPSKP 244
           PQG+LESV+KVKNAQFWP     P
Sbjct: 241 PQGMLESVSKVKNAQFWPYADPTP 261

[Close]

BLAST of Sed0028169 vs. ExPASy TrEMBL
Match: A0A6J1CRH8 (protein SODIUM POTASSIUM ROOT DEFECTIVE 2-like OS=Momordica charantia OX=3673 GN=LOC111013647 PE=4 SV=1)

HSP 1 Score: 298.9 bits (764), Expect = 1.9e-77
Identity = 168/261 (64.37%), Postives = 192/261 (73.56%), Query Frame = 0


Query: 1   MKTLEFLCASQASTAVSLP---TGDQAPPPSA------AGREIDRHNPLISDGKRTTA-- 60
           MK ++ LCASQASTAV LP   T   A  PS+      AG  IDRHNP+IS G+R T+  
Sbjct: 1   MKGVDMLCASQASTAVCLPLPTTAAAADQPSSSPLQPGAGAAIDRHNPIISGGRRITSRI 60

Query: 61  SRSFPNIPPCSSHYSPINPLPYHQLSAAASPNLAAGQIGSGDSMGLKKKKKSSSIIRADI 120
           + +FPN PPCSS YSPINPLPYH L A+ +   AA Q    D +   KKKK +SII  D+
Sbjct: 61  ATTFPN-PPCSSQYSPINPLPYHHLHASPAAAAAATQ----DPLNKIKKKKKTSIITTDL 120

Query: 121 ARWSCGKPTNLSTPPGSMRFLLNDKSFRDGSTDRVSTSILSTETNQKVINS--------- 180
            RWSC KP++L+TPPGSMR+LLNDKSFRDGS DR+S SIL +E++ KV +S         
Sbjct: 121 VRWSCAKPSDLATPPGSMRYLLNDKSFRDGSMDRLSKSILQSESHLKVTSSIENNRDESK 180

Query: 181 ---EILECKTSPPSNQVVVLRVSLHCRGCEGKLRKHLSKMEGVNSFTIDFAAKKVTIMGN 239
              EI E KT  PSNQVVVLRVSLHCRGCEGKLRKHLSKMEGVNSF IDFAAK VTIMGN
Sbjct: 181 STIEISEAKTPSPSNQVVVLRVSLHCRGCEGKLRKHLSKMEGVNSFNIDFAAKMVTIMGN 240

[Close]

BLAST of Sed0028169 vs. TAIR 10
Match: AT3G53530.1 (Chloroplast-targeted copper chaperone protein )

HSP 1 Score: 147.9 bits (372), Expect = 1.1e-35
Identity = 115/259 (44.40%), Postives = 148/259 (57.14%), Query Frame = 0


Query: 1   MKTLEFLCASQASTAVSLPTGDQAPPPSAAGREIDRHNPLISDGKRTTASRSFPNIPPCS 60
           MK   F CASQASTA +   G++    +   R IDRHNP+I DG+R+  +       PCS
Sbjct: 1   MKAGMFYCASQASTATA--NGER----TVTARAIDRHNPIIKDGRRSFTA-------PCS 60

Query: 61  SHYSPINPLPYHQLSAAASPNLAAGQIGSGDSMGLKKKKKSSS-----IIRADI--ARWS 120
           S    +   PY QLS            G G S+ + K ++S+S     +I  D+  AR S
Sbjct: 61  SGDDYV--APYRQLSKITR---VPSSSGDGKSVQVDKGRRSNSGSLMKLISYDVSLARKS 120

Query: 121 CG-KPTNLSTPPGSMRFLL-NDKSFRDGST--DRVSTSILSTETNQKVINSEILECKTS- 180
            G       TPPGS R+LL +D     GST  D V+T        ++  +  + E K S 
Sbjct: 121 FGCVVATPKTPPGSTRYLLGSDPVSLAGSTGQDTVATEESEASAPKRGSSGPVEEKKKSS 180

Query: 181 -PPSNQVVVLRVSL--HCRGCEGKLRKHLSKMEGVNSFTIDFAAKKVTIMGNITPQGVLE 240
              S+QVVVLRVSL  HCRGC+GK++KHLSKM+GV SF IDFA+KKVT+ G+ITP  VL 
Sbjct: 181 GSGSDQVVVLRVSLHCHCRGCQGKVKKHLSKMQGVTSFNIDFASKKVTVTGDITPLEVLG 240

Query: 241 SVAKVKNAQFW-PSLPSKP 244
            ++KVKNAQFW P  PS P
Sbjct: 241 CLSKVKNAQFWTPPPPSIP 241

[Close]

BLAST of Sed0028169 vs. TAIR 10
Match: AT3G53530.2 (Chloroplast-targeted copper chaperone protein )

HSP 1 Score: 143.3 bits (360), Expect = 2.6e-34
Identity = 115/260 (44.23%), Postives = 148/260 (56.92%), Query Frame = 0


Query: 1   MKTLEFLCASQASTAVSLPTGDQAPPPSAAGREIDRHNPLISDGKRTTASRSFPNIPPCS 60
           MK   F CASQASTA +   G++    +   R IDRHNP+I DG+R+  +       PCS
Sbjct: 1   MKAGMFYCASQASTATA--NGER----TVTARAIDRHNPIIKDGRRSFTA-------PCS 60

Query: 61  SHYSPINPLPYHQLSAAASPNLAAGQIGSGDSMGLKKKKKSSS-----IIRADI--ARWS 120
           S    +   PY QLS            G G S+ + K ++S+S     +I  D+  AR S
Sbjct: 61  SGDDYV--APYRQLSKITR---VPSSSGDGKSVQVDKGRRSNSGSLMKLISYDVSLARKS 120

Query: 121 CG-KPTNLSTPPGSMRFLL-NDKSFRDGST--DRVSTSILSTETNQKVINSEILECKTS- 180
            G       TPPGS R+LL +D     GST  D V+T        ++  +  + E K S 
Sbjct: 121 FGCVVATPKTPPGSTRYLLGSDPVSLAGSTGQDTVATEESEASAPKRGSSGPVEEKKKSS 180

Query: 181 -PPSNQVVVLRVSL--HCRGCEGKLRKHLSKME-GVNSFTIDFAAKKVTIMGNITPQGVL 240
              S+QVVVLRVSL  HCRGC+GK++KHLSKM+ GV SF IDFA+KKVT+ G+ITP  VL
Sbjct: 181 GSGSDQVVVLRVSLHCHCRGCQGKVKKHLSKMQVGVTSFNIDFASKKVTVTGDITPLEVL 240

Query: 241 ESVAKVKNAQFW-PSLPSKP 244
             ++KVKNAQFW P  PS P
Sbjct: 241 GCLSKVKNAQFWTPPPPSIP 242

[Close]

BLAST of Sed0028169 vs. TAIR 10
Match: AT2G37390.2 (Chloroplast-targeted copper chaperone protein )

HSP 1 Score: 138.3 bits (347), Expect = 8.4e-33
Identity = 102/253 (40.32%), Postives = 140/253 (55.34%), Query Frame = 0


Query: 8   CASQASTAV--------SLPTGDQAPPPSAAGREIDRHNPLISDGKRTTASRSFPNIPPC 67
           CASQASTA+           T D+    S  GR IDRHNP+I DG+R+ A   F  +P  
Sbjct: 7   CASQASTAICSSMDHVHKSTTTDEDERNS--GRAIDRHNPIIKDGRRSFAD-DFIKLPTS 66

Query: 68  SSHYSPIN-PLPYHQLSAAASPNLAAGQIGSGDSMGLKK--------KKKSSSIIRADIA 127
           +      N  L  ++   + +   + G  G G +  L K         +KS S     +A
Sbjct: 67  AEDGEMSNKKLEIYKGRRSITGRRSTGGGGGGGAAALLKLITNDIGLARKSFSC----VA 126

Query: 128 RWSCGKPTNLSTPPGSMRFLL-NDKSFRDGSTDRVSTSILSTETNQKVINSEILECKTSP 187
           R +C     + TP GS R+LL +D     GS D+     +  E       +   +  T  
Sbjct: 127 RPACDL---IKTPVGSTRYLLGSDPDSITGSVDQDPAKTVEAEAPAGEDKTLTEKKTTCG 186

Query: 188 PSNQVVVLRVSLHCRGCEGKLRKHLSKMEGVNSFTIDFAAKKVTIMGNITPQGVLESVAK 241
            ++QVVVL+VSLHCRGCEGK+RKHL++M+GV SF IDFAAKKVT+ G+ITP  +L+S++K
Sbjct: 187 DTDQVVVLKVSLHCRGCEGKVRKHLARMQGVTSFNIDFAAKKVTVTGDITPLEILDSISK 246

[Close]

BLAST of Sed0028169 vs. TAIR 10
Match: AT2G37390.1 (Chloroplast-targeted copper chaperone protein )

HSP 1 Score: 137.9 bits (346), Expect = 1.1e-32
Identity = 103/256 (40.23%), Postives = 139/256 (54.30%), Query Frame = 0


Query: 8   CASQASTAV--------SLPTGDQAPPPSAAGREIDRHNPLISDGKRTTASRSFPNIPPC 67
           CASQASTA+           T D+    S  GR IDRHNP+I DG+R+ A   F  +P  
Sbjct: 7   CASQASTAICSSMDHVHKSTTTDEDERNS--GRAIDRHNPIIKDGRRSFAD-DFIKLPTS 66

Query: 68  SSHYSPIN-PLPYHQLSAAASPNLAAGQIGSGDSMGLKK--------KKKSSSIIRADIA 127
           +      N  L  ++   + +   + G  G G +  L K         +KS S     +A
Sbjct: 67  AEDGEMSNKKLEIYKGRRSITGRRSTGGGGGGGAAALLKLITNDIGLARKSFSC----VA 126

Query: 128 RWSCGKPTNLSTPPGSMRFLL-NDKSFRDGSTDRVSTSILSTET---NQKVINSEILECK 187
           R +C     + TP GS R+LL +D     GS D+     +  E      K +  +   C 
Sbjct: 127 RPACDL---IKTPVGSTRYLLGSDPDSITGSVDQDPAKTVEAEAPAGEDKTLTEKKTTC- 186

Query: 188 TSPPSNQVVVLRVSLHCRGCEGKLRKHLSKMEGVNSFTIDFAAKKVTIMGNITPQGVLES 241
                 QVVVL+VSLHCRGCEGK+RKHL++M+GV SF IDFAAKKVT+ G+ITP  +L+S
Sbjct: 187 -GDTDQQVVVLKVSLHCRGCEGKVRKHLARMQGVTSFNIDFAAKKVTVTGDITPLEILDS 246

[Close]

BLAST of Sed0028169 vs. TAIR 10
Match: AT5G02600.2 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 131.3 bits (329), Expect = 1.0e-30
Identity = 111/333 (33.33%), Postives = 143/333 (42.94%), Query Frame = 0


Query: 7   LCASQASTAVSLPTGDQAPPPSAA--------GREIDRHNPLISDGKRTTASRSFPNIPP 66
           LCASQAST     T DQ   PS++        GR IDRHNP+I DG+R T   S PN+ P
Sbjct: 2   LCASQASTTTLCSTMDQTSQPSSSSSATIRLGGRAIDRHNPIIRDGRRLTPPPS-PNLNP 61

Query: 67  CSSHYSPINPLPYHQLSAAASPNLAAGQIGSGDSMGLKKKKKSSSIIRADIARWSCGKPT 126
            SS  S      YH      +P +    + S +   L K+K          +  SC    
Sbjct: 62  SSSSSS-----TYH------TPLMTRLGLESSEQKRLAKRKSKKGDSDVGKSPVSC---F 121

Query: 127 NLSTPPGSMRFLLNDKSFRDGSTDR---------------------------------VS 186
           +  TP GS R+LL++  F DG  D                                  +S
Sbjct: 122 SSDTPQGSSRYLLSNPVFFDGFVDSDPIPIPIDEPEITKADDLNNFHEDRLIINASKYLS 181

Query: 187 TSILSTETNQ-------------------------------------KVINSEILECKTS 243
           TS    E  Q                                     K ++S   +    
Sbjct: 182 TSASFLEKKQPDFFEGFLDYEPVLSPDNPFSEPTKASPTASLSSLEDKDVSSPDFKFSPP 241

The following BLAST results are available for this feature:

BLAST of Sed0028169 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023543184.1	2.7e-89	71.65	protein SODIUM POTASSIUM ROOT DEFECTIVE 3-like [Cucurbita pepo subsp. pepo]	[more]
XP_022977250.1	1.5e-87	70.88	protein SODIUM POTASSIUM ROOT DEFECTIVE 3-like [Cucurbita maxima]	[more]
KAG7033858.1	7.2e-87	71.48	Protein SODIUM POTASSIUM ROOT DEFECTIVE 3, partial [Cucurbita argyrosperma subsp...	[more]
KAG6603681.1	6.1e-86	70.24	Protein SODIUM POTASSIUM ROOT DEFECTIVE 3, partial [Cucurbita argyrosperma subsp...	[more]
XP_022950246.1	6.8e-85	70.31	protein SODIUM POTASSIUM ROOT DEFECTIVE 3-like [Cucurbita moschata]	[more]

BLAST of Sed0028169 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8RXH8	1.5e-34	44.40	Protein SODIUM POTASSIUM ROOT DEFECTIVE 3 OS=Arabidopsis thaliana OX=3702 GN=NAK...	[more]
Q58FZ0	1.5e-31	40.23	Protein SODIUM POTASSIUM ROOT DEFECTIVE 2 OS=Arabidopsis thaliana OX=3702 GN=NAK...	[more]
Q8LDS4	1.4e-29	33.33	Protein SODIUM POTASSIUM ROOT DEFECTIVE 1 OS=Arabidopsis thaliana OX=3702 GN=NAK...	[more]
Q94BT9	2.3e-11	48.48	Copper transport protein ATX1 OS=Arabidopsis thaliana OX=3702 GN=ATX1 PE=1 SV=2	[more]
O82089	3.0e-11	46.97	Copper transport protein CCH OS=Arabidopsis thaliana OX=3702 GN=CCH PE=1 SV=1	[more]

BLAST of Sed0028169 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1ILS7	7.0e-88	70.88	protein SODIUM POTASSIUM ROOT DEFECTIVE 3-like OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A6J1GEB0	3.3e-85	70.31	protein SODIUM POTASSIUM ROOT DEFECTIVE 3-like OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A5A7TZF0	9.2e-80	65.15	HMA domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc...	[more]
A0A1S3BIC7	9.2e-80	65.15	uncharacterized protein LOC103489885 OS=Cucumis melo OX=3656 GN=LOC103489885 PE=...	[more]
A0A6J1CRH8	1.9e-77	64.37	protein SODIUM POTASSIUM ROOT DEFECTIVE 2-like OS=Momordica charantia OX=3673 GN...	[more]

BLAST of Sed0028169 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G53530.1	1.1e-35	44.40	Chloroplast-targeted copper chaperone protein	[more]
AT3G53530.2	2.6e-34	44.23	Chloroplast-targeted copper chaperone protein	[more]
AT2G37390.2	8.4e-33	40.32	Chloroplast-targeted copper chaperone protein	[more]
AT2G37390.1	1.1e-32	40.23	Chloroplast-targeted copper chaperone protein	[more]
AT5G02600.2	1.0e-30	33.33	Heavy metal transport/detoxification superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.30.70.100		coord: 171..234 e-value: 3.6E-15 score: 58.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 17..56
None	No IPR available	PANTHER	PTHR46119:SF15	PROTEIN SODIUM POTASSIUM ROOT DEFECTIVE 2	coord: 1..241
IPR006121	Heavy metal-associated domain, HMA	PFAM	PF00403	HMA	coord: 177..227 e-value: 6.4E-12 score: 45.7
IPR006121	Heavy metal-associated domain, HMA	PROSITE	PS50846	HMA_2	coord: 173..230 score: 10.491467
IPR006121	Heavy metal-associated domain, HMA	CDD	cd00371	HMA	coord: 176..229 e-value: 5.77668E-12 score: 57.6157
IPR044526	Protein SODIUM POTASSIUM ROOT DEFECTIVE 1/2/3	PANTHER	PTHR46119	OS08G0405700 PROTEIN	coord: 1..241
IPR036163	Heavy metal-associated domain superfamily	SUPERFAMILY	55008	HMA, heavy metal-associated domain	coord: 171..230

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0028169.1	Sed0028169.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0046872	metal ion binding