Sed0028102 (gene) Chayote v1

Overview


Name	Sed0028102
Type	gene
Organism	Sechium edule (Chayote v1)
Description	transcription termination factor MTERF4, chloroplastic
Location	LG03: 13645675 .. 13649409 (-)
RNA-Seq Expression	Sed0028102
Synteny	Sed0028102

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGTTTATTAAAAAGTAACCCTATCTTCCCACGCTCTCCATTTCCAGTGTTCGCCATTGCAGGCCTTCAAGCTCTCGCTCTTCTTGCCCCGACCATAAGAAATCTCCGGTAAGTTCCTCAGTTTTCGTACTAAAATTTACATGCTGAAGTTCGGACCTTTTTTCCCTTCAATTTTTGGCGGTTGTTATCGGCGTTTCTTTGGGTCGATTTTCCGGCAGAAATTGGTGGCGGTAATGATTCAGTACGGTGGTTTTGGAAGTGGGTCAAATCTCTCAGAGATAGAACAAGTTTGAAAAACAAAGGGCGGGTGAAATTTGTTTAAGAGAGGATTTGATTTGGTCTTTTTAGTTTTGCATATATTTGATGCTTGATTCTCTTCAAACTCTTAGAATTTTTGGACTATGTCATACTTTTGAAAGTGGATGTAAATAATTAGCAAGGAGGGTAGAATAATCATAGTTAAGAAAGACAACCGTATTGATAATTCTATACGAGCATCAAATAATAGGAGGAAGCTTTGTCTACATATTAGAGAATATGGGGTTCCACCTTAAAACCAATTGGTAATGAGCAGAGTAATTCATATCTCTTTTACATTGATGTTGGACGCTCCCACTTTTCAATGTGGAACATTTGTGAGATCCTAACATTACAAATATCCTTTTGTTTCATACAGTCCATAATGTCCAGAAAAAAAGGCTCTTACAAAACTCTCCCATTTCCCATTCCCTAGGGCGGCGCAGTGGCACCTGGGTGTTGGGAGTGTACTCCCCTTCGCATCCTTAGTTTGGCATTGGTGTGGGAATTAGTTTCCCTAGTGGCCCTGCTTCCCACCTCCAGTCCTACGATGTATTCTAGTACCACAGTTTAGAGATGGACCAGTGGTATCCCAGGTTTAGTGGACCAAAGTTCCAAGTTCTCGGGTCATCGAAAAAAAAAAACTCCCATTTCCCAAATAAGCTTGGTCTTGATCTTGAATAGATGCCCCTTGTGGGTAATAGACAGCAAACACTTAGAATTTTCAGGTAGAGGGACACTCTAGTTGAAAGCCAATAAAATATAATCCTATAAGGCATGAGTTAATTGGCCTCTAGAGAAAATATGATCCTGTTGTTTCTGAATTCTGTTTACAAAGGACTGGGGGGCTAATGTCAGATGAGGAGCCTTTGTTGCAGCATATCATAACTAGGATGTAATCGAAATTAAATTTTGTAGTGTCTTTAGTATTATACGCTCATCTTGTAATCTGTGTTGTTGGTGCTTATGGAAAGAACGAAATCAAAGAGTTGTTTAGGTAAAGGAGACACCATTATGCAAGTTTTATGATTCTATTGTTTATTTAGTAGTTGTGCAAATAGTTCCCTCTTTTTCATCATTATAGTTATGTCTCCCTCCATGCTAAGGAGAGTGACTTTTTGTAATTCTCTCTTCCGGGGTTCACCAATTCTTTTGTAATTTCACTCATCAATAAAATTGCTTCTTAGCCAGAAGAAAGTAAATACGAGTTAATCCATTTTGTACAATATTTTGTTATCCGTAGAGATGTTTTTTTCTTCTTCTTATTTTCAAATCATTATTTAAATAGTAACATATATGTAGTTTTCTTTCCAGGTGCAGTTGAGTGGAAAATCTGGAGGCAAGATGATCAGAGGCCATGCTGGTTTGGTGAAACCTAATTTTTCCATCATGTTATTCGAGATGCCTACTCTTAAGTGTCACAAATTCAAACTTAGTACCACATCAACTTTTCCAGCGCCTGCTATCCATGAGAAAAGGAGAGGTTTGATTACAAAGCTACAATATTCTCCCGGTGATAGGAGAACGGTTTCCAAATCTGTGCAGTCAACTGTTACATCAAAACCTTACAGTTCTCAAGTGGGTAGAAAAGAGGGAAGTTCTTCATCATTATATAGTCGCCCTAGCTTAGTGGAAATGAAGAATGTGAGGTTGGAAAATCGTGCAAAGGTGTACGAGTTCTTGCGTGGAATTGGTGTAGTTCCTGATGAGCTTGATGGATTGGAGCTTCCTGTAACAATTGATGTTATGAAGGAACGTGTCGATTTTCTTCTCAAGTTGGGACTTACAATTGAAGATATAAATAACTACCCTCTTGTTCTTGGCTGCAGTGTTAAAAAAAATATGATACCAGTACTTGATTACCTTGGTAAATTAGGTGTTAGGAAATCTACTTTCACTGAGTTTTTAAGAAGGTATCCGCAAGTCCTCCATTCTAGCGTCGTTGTAGACCTTGCTCCAGTAGTCAAGTATCTTCAAGGCATGGATATTAAACCAAGTGACGTCCCACGCGTTCTTGAGAGATATCCGGAAGTATTAGGGTTTAAGCTTGAGGGAACCATGAGTACTTCAGTGGCATACTTGGTAGGAATTGGAGTGGCAAGAAGAGAAATTGGAGGGGTTTTAACCAAATACCCTGAAATTTTGGGAATGAGGGTTGCTCGGGTAATCAAGCCGTTTGTCGAATATCTTGAAAGTTTGGGAATTCCAAGATTAGCAGTTGCTAGGTTAATAGAGAACCGGCCACACATTCTGGGGTTTGGATTGGAAAAAAAGGTTAAACCCAATATTCAATTGCTCTTGGAGTTTAATGTAAGAGAAGCATACCTTTCTTCTATAGTTGCACAGTATGCCGAGATCATAGGAATGGACCTTGAGACTAGGCTTCTAAGTCAAAGGAACTTACTAAAATCAATAATCGAATTGGATGATGATAACTTTGGCACTATCATTGAAAAGATGCCACAAATTGTTAGCCTTAGCAGTTCAGCTGTGATCAACCATGTGGATTTCTTAAAAAATTGTGGGTTTTCCTTACTGCAAGTAAAGAACATGGTTATTGGTTGCCCTCAATTGCTTGCTTTGAATCTTGACATAATGAAACACAGCTTTCAGTTCTTCCAAAAGCAGATGGGAAGGCCTTTAGACGATTTAGTTGCTTTTCCTGCCTTCTTTACTTATAGTCTGGAGTCCACAATAAAACCCAGACACAGGAAGGTTGTGCAGAAGGGAATTAGCTGTTCACTTTCATGGCTCCTCAATTGTTCCGATGACAAGTTTGTCGAAAGGATGTCCTACGACACCATTGACATGGAGGAGATGGAAACCGAACCTATGTTCGATATGAATTCTCTTGTCCAACCCCGTAATGATGAATCCGATTCTGACTATGAAGAGGACAGTGAGGAGGAGGAGAAGGAGGAGGAGGCTTGACAGGGTATTTTCTTGGCTTCGGGAAATGGTCTGGACTGAAGGGCAGTGATTAAGTTATTTTTTTTTACAATTTTTGGATCTCATTAGCATCTGCAACAAATTTGGAAAGGTAGTTCATTCAGTTCTTTTCTTCCGTACTAAATTTGGGTACAGTTTTGTTTTCTTTTACTAGTCCAAACCGTTTCCCATTAGGTATGACACAGTAAGCTGCAGCATTGACCATTTTGTAACGTGATTGTATATTGTCTTGTTGAAATTGATCTGTATGAAAGTCATAGTCTTCCTTTGCGAACTGCATTTTTCATCTCTTATTTCTTGTTGCGAAGAAAATTTGATTTAGTCTTACGATTTCGGTCTATGACTCTGTATGTCTCGAATTAAAAGAGGTGCAGATTGTGTATGATATTTCTTATTCTACATGGCTTAATGAATTAAGAGAACATTGTGTATGATATTTCTTATACTTTGTTCATCTAGATGTTATGATACAAGAAATATTGCTCCATGC

mRNA sequence

TGTTTATTAAAAAGTAACCCTATCTTCCCACGCTCTCCATTTCCAGTGTTCGCCATTGCAGGCCTTCAAGCTCTCGCTCTTCTTGCCCCGACCATAAGAAATCTCCGGTGCAGTTGAGTGGAAAATCTGGAGGCAAGATGATCAGAGGCCATGCTGGTTTGGTGAAACCTAATTTTTCCATCATGTTATTCGAGATGCCTACTCTTAAGTGTCACAAATTCAAACTTAGTACCACATCAACTTTTCCAGCGCCTGCTATCCATGAGAAAAGGAGAGGTTTGATTACAAAGCTACAATATTCTCCCGGTGATAGGAGAACGGTTTCCAAATCTGTGCAGTCAACTGTTACATCAAAACCTTACAGTTCTCAAGTGGGTAGAAAAGAGGGAAGTTCTTCATCATTATATAGTCGCCCTAGCTTAGTGGAAATGAAGAATGTGAGGTTGGAAAATCGTGCAAAGGTGTACGAGTTCTTGCGTGGAATTGGTGTAGTTCCTGATGAGCTTGATGGATTGGAGCTTCCTGTAACAATTGATGTTATGAAGGAACGTGTCGATTTTCTTCTCAAGTTGGGACTTACAATTGAAGATATAAATAACTACCCTCTTGTTCTTGGCTGCAGTGTTAAAAAAAATATGATACCAGTACTTGATTACCTTGGTAAATTAGGTGTTAGGAAATCTACTTTCACTGAGTTTTTAAGAAGGTATCCGCAAGTCCTCCATTCTAGCGTCGTTGTAGACCTTGCTCCAGTAGTCAAGTATCTTCAAGGCATGGATATTAAACCAAGTGACGTCCCACGCGTTCTTGAGAGATATCCGGAAGTATTAGGGTTTAAGCTTGAGGGAACCATGAGTACTTCAGTGGCATACTTGGTAGGAATTGGAGTGGCAAGAAGAGAAATTGGAGGGGTTTTAACCAAATACCCTGAAATTTTGGGAATGAGGGTTGCTCGGGTAATCAAGCCGTTTGTCGAATATCTTGAAAGTTTGGGAATTCCAAGATTAGCAGTTGCTAGGTTAATAGAGAACCGGCCACACATTCTGGGGTTTGGATTGGAAAAAAAGGTTAAACCCAATATTCAATTGCTCTTGGAGTTTAATGTAAGAGAAGCATACCTTTCTTCTATAGTTGCACAGTATGCCGAGATCATAGGAATGGACCTTGAGACTAGGCTTCTAAGTCAAAGGAACTTACTAAAATCAATAATCGAATTGGATGATGATAACTTTGGCACTATCATTGAAAAGATGCCACAAATTGTTAGCCTTAGCAGTTCAGCTGTGATCAACCATGTGGATTTCTTAAAAAATTGTGGGTTTTCCTTACTGCAAGTAAAGAACATGGTTATTGGTTGCCCTCAATTGCTTGCTTTGAATCTTGACATAATGAAACACAGCTTTCAGTTCTTCCAAAAGCAGATGGGAAGGCCTTTAGACGATTTAGTTGCTTTTCCTGCCTTCTTTACTTATAGTCTGGAGTCCACAATAAAACCCAGACACAGGAAGGTTGTGCAGAAGGGAATTAGCTGTTCACTTTCATGGCTCCTCAATTGTTCCGATGACAAGTTTGTCGAAAGGATGTCCTACGACACCATTGACATGGAGGAGATGGAAACCGAACCTATGTTCGATATGAATTCTCTTGTCCAACCCCGTAATGATGAATCCGATTCTGACTATGAAGAGGACAGTGAGGAGGAGGAGAAGGAGGAGGAGGCTTGACAGGGTATTTTCTTGGCTTCGGGAAATGGTCTGGACTGAAGGGCAGTGATTAAGTTATTTTTTTTTACAATTTTTGGATCTCATTAGCATCTGCAACAAATTTGGAAAGGTAGTTCATTCAGTTCTTTTCTTCCGTACTAAATTTGGGTACAGTTTTGTTTTCTTTTACTAGTCCAAACCGTTTCCCATTAGGTATGACACAGTAAGCTGCAGCATTGACCATTTTGTAACGTGATTGTATATTGTCTTGTTGAAATTGATCTGTATGAAAGTCATAGTCTTCCTTTGCGAACTGCATTTTTCATCTCTTATTTCTTGTTGCGAAGAAAATTTGATTTAGTCTTACGATTTCGGTCTATGACTCTGTATGTCTCGAATTAAAAGAGGTGCAGATTGTGTATGATATTTCTTATTCTACATGGCTTAATGAATTAAGAGAACATTGTGTATGATATTTCTTATACTTTGTTCATCTAGATGTTATGATACAAGAAATATTGCTCCATGC

Coding sequence (CDS)

ATGATCAGAGGCCATGCTGGTTTGGTGAAACCTAATTTTTCCATCATGTTATTCGAGATGCCTACTCTTAAGTGTCACAAATTCAAACTTAGTACCACATCAACTTTTCCAGCGCCTGCTATCCATGAGAAAAGGAGAGGTTTGATTACAAAGCTACAATATTCTCCCGGTGATAGGAGAACGGTTTCCAAATCTGTGCAGTCAACTGTTACATCAAAACCTTACAGTTCTCAAGTGGGTAGAAAAGAGGGAAGTTCTTCATCATTATATAGTCGCCCTAGCTTAGTGGAAATGAAGAATGTGAGGTTGGAAAATCGTGCAAAGGTGTACGAGTTCTTGCGTGGAATTGGTGTAGTTCCTGATGAGCTTGATGGATTGGAGCTTCCTGTAACAATTGATGTTATGAAGGAACGTGTCGATTTTCTTCTCAAGTTGGGACTTACAATTGAAGATATAAATAACTACCCTCTTGTTCTTGGCTGCAGTGTTAAAAAAAATATGATACCAGTACTTGATTACCTTGGTAAATTAGGTGTTAGGAAATCTACTTTCACTGAGTTTTTAAGAAGGTATCCGCAAGTCCTCCATTCTAGCGTCGTTGTAGACCTTGCTCCAGTAGTCAAGTATCTTCAAGGCATGGATATTAAACCAAGTGACGTCCCACGCGTTCTTGAGAGATATCCGGAAGTATTAGGGTTTAAGCTTGAGGGAACCATGAGTACTTCAGTGGCATACTTGGTAGGAATTGGAGTGGCAAGAAGAGAAATTGGAGGGGTTTTAACCAAATACCCTGAAATTTTGGGAATGAGGGTTGCTCGGGTAATCAAGCCGTTTGTCGAATATCTTGAAAGTTTGGGAATTCCAAGATTAGCAGTTGCTAGGTTAATAGAGAACCGGCCACACATTCTGGGGTTTGGATTGGAAAAAAAGGTTAAACCCAATATTCAATTGCTCTTGGAGTTTAATGTAAGAGAAGCATACCTTTCTTCTATAGTTGCACAGTATGCCGAGATCATAGGAATGGACCTTGAGACTAGGCTTCTAAGTCAAAGGAACTTACTAAAATCAATAATCGAATTGGATGATGATAACTTTGGCACTATCATTGAAAAGATGCCACAAATTGTTAGCCTTAGCAGTTCAGCTGTGATCAACCATGTGGATTTCTTAAAAAATTGTGGGTTTTCCTTACTGCAAGTAAAGAACATGGTTATTGGTTGCCCTCAATTGCTTGCTTTGAATCTTGACATAATGAAACACAGCTTTCAGTTCTTCCAAAAGCAGATGGGAAGGCCTTTAGACGATTTAGTTGCTTTTCCTGCCTTCTTTACTTATAGTCTGGAGTCCACAATAAAACCCAGACACAGGAAGGTTGTGCAGAAGGGAATTAGCTGTTCACTTTCATGGCTCCTCAATTGTTCCGATGACAAGTTTGTCGAAAGGATGTCCTACGACACCATTGACATGGAGGAGATGGAAACCGAACCTATGTTCGATATGAATTCTCTTGTCCAACCCCGTAATGATGAATCCGATTCTGACTATGAAGAGGACAGTGAGGAGGAGGAGAAGGAGGAGGAGGCTTGA

Protein sequence

MIRGHAGLVKPNFSIMLFEMPTLKCHKFKLSTTSTFPAPAIHEKRRGLITKLQYSPGDRRTVSKSVQSTVTSKPYSSQVGRKEGSSSSLYSRPSLVEMKNVRLENRAKVYEFLRGIGVVPDELDGLELPVTIDVMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNMIPVLDYLGKLGVRKSTFTEFLRRYPQVLHSSVVVDLAPVVKYLQGMDIKPSDVPRVLERYPEVLGFKLEGTMSTSVAYLVGIGVARREIGGVLTKYPEILGMRVARVIKPFVEYLESLGIPRLAVARLIENRPHILGFGLEKKVKPNIQLLLEFNVREAYLSSIVAQYAEIIGMDLETRLLSQRNLLKSIIELDDDNFGTIIEKMPQIVSLSSSAVINHVDFLKNCGFSLLQVKNMVIGCPQLLALNLDIMKHSFQFFQKQMGRPLDDLVAFPAFFTYSLESTIKPRHRKVVQKGISCSLSWLLNCSDDKFVERMSYDTIDMEEMETEPMFDMNSLVQPRNDESDSDYEEDSEEEEKEEEA

Homology

[Close]

BLAST of Sed0028102 vs. NCBI nr
Match: KAG7021053.1 (Transcription termination factor MTERF4, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 935.6 bits (2417), Expect = 1.8e-268
Identity = 475/522 (91.00%), Postives = 499/522 (95.59%), Query Frame = 0


Query: 1   MIRGHAGLVKPNFSIMLFEMPTLKCHKFKLSTTSTFPAPAIHEKRRGLITKLQYSPGDRR 60
           MIRGH G++KPNFSIML EMPTLKCHKFK  TTSTF     HEKRRGLITKLQYS GDRR
Sbjct: 15  MIRGHTGVLKPNFSIMLLEMPTLKCHKFKFGTTSTFQTSPNHEKRRGLITKLQYSRGDRR 74

Query: 61  TVSKSVQSTVTSKPYSSQVGRKEGSSSSLYSRPSLVEMKNVRLENRAKVYEFLRGIGVVP 120
           TVSKS+ ST+TSKPYSS+VGRKEGS+SSLYSRPSLVEMKNVR ENRAKVYEFLRGIG+VP
Sbjct: 75  TVSKSLHSTITSKPYSSKVGRKEGSASSLYSRPSLVEMKNVRQENRAKVYEFLRGIGIVP 134

Query: 121 DELDGLELPVTIDVMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNMIPVLDYLGKLGVR 180
           DELDGLELPVT+DVMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNM+PVLDYLGKLGVR
Sbjct: 135 DELDGLELPVTVDVMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNMVPVLDYLGKLGVR 194

Query: 181 KSTFTEFLRRYPQVLHSSVVVDLAPVVKYLQGMDIKPSDVPRVLERYPEVLGFKLEGTMS 240
           KSTFTEFLRRYPQVLHSSVVVDL PVVKYLQGMDIKPSD+PRVLERYPEVLGFKLEGTMS
Sbjct: 195 KSTFTEFLRRYPQVLHSSVVVDLGPVVKYLQGMDIKPSDIPRVLERYPEVLGFKLEGTMS 254

Query: 241 TSVAYLVGIGVARREIGGVLTKYPEILGMRVARVIKPFVEYLESLGIPRLAVARLIENRP 300
           TSVAYLVGIGVARREIGGVLTKYPEILGMRVARVIKPFVEYLESLGIPRLAVARLIE RP
Sbjct: 255 TSVAYLVGIGVARREIGGVLTKYPEILGMRVARVIKPFVEYLESLGIPRLAVARLIEKRP 314

Query: 301 HILGFGLEKKVKPNIQLLLEFNVREAYLSSIVAQYAEIIGMDLETRLLSQRNLLKSIIEL 360
           HILGFGLEK+VKPNIQLLLEFNVREAYLSSIVAQYAEIIGMDLET+L SQRNLLKSIIEL
Sbjct: 315 HILGFGLEKRVKPNIQLLLEFNVREAYLSSIVAQYAEIIGMDLETKLPSQRNLLKSIIEL 374

Query: 361 DDDNFGTIIEKMPQIVSLSSSAVINHVDFLKNCGFSLLQVKNMVIGCPQLLALNLDIMKH 420
           D++NFGTIIEKMPQ+VSLSSSAV +HVDFLK+CGFSL QVKNMVIGCPQLLALNLDIMKH
Sbjct: 375 DNNNFGTIIEKMPQVVSLSSSAVNSHVDFLKSCGFSLQQVKNMVIGCPQLLALNLDIMKH 434

Query: 421 SFQFFQKQMGRPLDDLVAFPAFFTYSLESTIKPRHRKVVQKGISCSLSWLLNCSDDKFVE 480
           SFQFF+K+MGRPLDDLVAFPAFFTY LESTIKPRHRKVVQKG++CSLSWLLNCSD+KF E
Sbjct: 435 SFQFFRKEMGRPLDDLVAFPAFFTYGLESTIKPRHRKVVQKGVTCSLSWLLNCSDEKFAE 494

Query: 481 RMSYDTIDMEEMETEPMFDMNSLVQPRNDESDSDYEEDSEEE 523
           RM+YDTIDMEEMET P FDM+SL QPR DESDSDYEEDSEEE
Sbjct: 495 RMTYDTIDMEEMETAPTFDMSSLTQPRYDESDSDYEEDSEEE 536

[Close]

BLAST of Sed0028102 vs. NCBI nr
Match: KAG6586221.1 (Transcription termination factor MTERF4, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 934.9 bits (2415), Expect = 3.1e-268
Identity = 475/522 (91.00%), Postives = 499/522 (95.59%), Query Frame = 0


Query: 1   MIRGHAGLVKPNFSIMLFEMPTLKCHKFKLSTTSTFPAPAIHEKRRGLITKLQYSPGDRR 60
           MIRGH G++KPNFSIML EMPTLKCHKFK  TTSTF     HEKRRGLITKLQYS GDRR
Sbjct: 2   MIRGHTGVLKPNFSIMLLEMPTLKCHKFKFGTTSTFQTSPNHEKRRGLITKLQYSRGDRR 61

Query: 61  TVSKSVQSTVTSKPYSSQVGRKEGSSSSLYSRPSLVEMKNVRLENRAKVYEFLRGIGVVP 120
           TVSKS+ ST+TSKPYSS+VGRKEGS+SSLYSRPSLVEMKNVR ENRAKVYEFLRGIG+VP
Sbjct: 62  TVSKSLHSTITSKPYSSKVGRKEGSASSLYSRPSLVEMKNVRQENRAKVYEFLRGIGIVP 121

Query: 121 DELDGLELPVTIDVMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNMIPVLDYLGKLGVR 180
           DELDGLELPVT+DVMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNM+PVLDYLGKLGVR
Sbjct: 122 DELDGLELPVTVDVMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNMVPVLDYLGKLGVR 181

Query: 181 KSTFTEFLRRYPQVLHSSVVVDLAPVVKYLQGMDIKPSDVPRVLERYPEVLGFKLEGTMS 240
           KSTFTEFLRRYPQVLHSSVVVDL PVVKYLQGMDIKPSD+PRVLERYPEVLGFKLEGTMS
Sbjct: 182 KSTFTEFLRRYPQVLHSSVVVDLGPVVKYLQGMDIKPSDIPRVLERYPEVLGFKLEGTMS 241

Query: 241 TSVAYLVGIGVARREIGGVLTKYPEILGMRVARVIKPFVEYLESLGIPRLAVARLIENRP 300
           TSVAYLVGIGVARREIGGVLTKYPEILGMRVARVIKPFVEYLESLGIPRLAVARLIE RP
Sbjct: 242 TSVAYLVGIGVARREIGGVLTKYPEILGMRVARVIKPFVEYLESLGIPRLAVARLIEKRP 301

Query: 301 HILGFGLEKKVKPNIQLLLEFNVREAYLSSIVAQYAEIIGMDLETRLLSQRNLLKSIIEL 360
           HILGFGLEK+VKPNIQLLLEFNVREAYLSSIVAQYAEIIGMDLET+L SQRNLLKSIIEL
Sbjct: 302 HILGFGLEKRVKPNIQLLLEFNVREAYLSSIVAQYAEIIGMDLETKLPSQRNLLKSIIEL 361

Query: 361 DDDNFGTIIEKMPQIVSLSSSAVINHVDFLKNCGFSLLQVKNMVIGCPQLLALNLDIMKH 420
           D++NFGTIIEKMPQ+VSLSSSAV +HVDFLK+CGFSL QVKNMVIGCPQLLALNLDIMKH
Sbjct: 362 DNNNFGTIIEKMPQVVSLSSSAVNSHVDFLKSCGFSLQQVKNMVIGCPQLLALNLDIMKH 421

Query: 421 SFQFFQKQMGRPLDDLVAFPAFFTYSLESTIKPRHRKVVQKGISCSLSWLLNCSDDKFVE 480
           SFQFF+K+MGRPLDDLVAFPAFFTY LESTIKPRHRKVVQKG++CSLSWLLNCSD+KF E
Sbjct: 422 SFQFFRKEMGRPLDDLVAFPAFFTYGLESTIKPRHRKVVQKGMTCSLSWLLNCSDEKFAE 481

Query: 481 RMSYDTIDMEEMETEPMFDMNSLVQPRNDESDSDYEEDSEEE 523
           RM+YDTIDMEEMET P FDM+SL QPR DESDSDYEEDSEEE
Sbjct: 482 RMTYDTIDMEEMETAPTFDMSSLTQPRYDESDSDYEEDSEEE 523

[Close]

BLAST of Sed0028102 vs. NCBI nr
Match: XP_022938209.1 (transcription termination factor MTERF4, chloroplastic [Cucurbita moschata] >XP_022938210.1 transcription termination factor MTERF4, chloroplastic [Cucurbita moschata] >XP_022938211.1 transcription termination factor MTERF4, chloroplastic [Cucurbita moschata])

HSP 1 Score: 934.1 bits (2413), Expect = 5.3e-268
Identity = 476/522 (91.19%), Postives = 497/522 (95.21%), Query Frame = 0


Query: 1   MIRGHAGLVKPNFSIMLFEMPTLKCHKFKLSTTSTFPAPAIHEKRRGLITKLQYSPGDRR 60
           MIRGH G+VKPNFSIML EMPTLKCHKFK  TTSTF     HEKRRGLITKLQYS GD R
Sbjct: 2   MIRGHTGVVKPNFSIMLLEMPTLKCHKFKFDTTSTFQTSPNHEKRRGLITKLQYSRGDWR 61

Query: 61  TVSKSVQSTVTSKPYSSQVGRKEGSSSSLYSRPSLVEMKNVRLENRAKVYEFLRGIGVVP 120
           TVSKS+ ST+TSKPYSS+VGRKEGS+SSLYSRPSLVEMKNVR ENRAKVYEFLRGIG+VP
Sbjct: 62  TVSKSLHSTITSKPYSSKVGRKEGSASSLYSRPSLVEMKNVRQENRAKVYEFLRGIGIVP 121

Query: 121 DELDGLELPVTIDVMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNMIPVLDYLGKLGVR 180
           DELDGLELPVT+DVMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNM+PVLDYLGKLGVR
Sbjct: 122 DELDGLELPVTVDVMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNMVPVLDYLGKLGVR 181

Query: 181 KSTFTEFLRRYPQVLHSSVVVDLAPVVKYLQGMDIKPSDVPRVLERYPEVLGFKLEGTMS 240
           KSTFTEFLRRYPQVLHSSVVVDL PVVKYLQGMDIKPSD+PRVLERYPEVLGFKLEGTMS
Sbjct: 182 KSTFTEFLRRYPQVLHSSVVVDLGPVVKYLQGMDIKPSDIPRVLERYPEVLGFKLEGTMS 241

Query: 241 TSVAYLVGIGVARREIGGVLTKYPEILGMRVARVIKPFVEYLESLGIPRLAVARLIENRP 300
           TSVAYLVGIGVARREIGGVLTKYPEILGMRVARVIKPFVEYLESLGIPRLAVARLIE RP
Sbjct: 242 TSVAYLVGIGVARREIGGVLTKYPEILGMRVARVIKPFVEYLESLGIPRLAVARLIEKRP 301

Query: 301 HILGFGLEKKVKPNIQLLLEFNVREAYLSSIVAQYAEIIGMDLETRLLSQRNLLKSIIEL 360
           HILGFGLEK+VKPNIQLLLEFNVREAYLSSIVAQYAEIIGMDLET+L SQRNLLKSIIEL
Sbjct: 302 HILGFGLEKRVKPNIQLLLEFNVREAYLSSIVAQYAEIIGMDLETKLPSQRNLLKSIIEL 361

Query: 361 DDDNFGTIIEKMPQIVSLSSSAVINHVDFLKNCGFSLLQVKNMVIGCPQLLALNLDIMKH 420
           D+DNFGTIIEKMPQ+VSLSSSAV +HVD LK+CGFSL QVKNMVIGCPQLLALNLDIMKH
Sbjct: 362 DNDNFGTIIEKMPQVVSLSSSAVNSHVDCLKSCGFSLQQVKNMVIGCPQLLALNLDIMKH 421

Query: 421 SFQFFQKQMGRPLDDLVAFPAFFTYSLESTIKPRHRKVVQKGISCSLSWLLNCSDDKFVE 480
           SFQFFQK+MGRPLDDLVAFPAFFTY LESTIKPRHRKVVQKG++CSLSWLLNCSD+KF E
Sbjct: 422 SFQFFQKEMGRPLDDLVAFPAFFTYGLESTIKPRHRKVVQKGVTCSLSWLLNCSDEKFAE 481

Query: 481 RMSYDTIDMEEMETEPMFDMNSLVQPRNDESDSDYEEDSEEE 523
           RM+YDTIDMEEMET P FDM+SL QPR DESDSDYEEDSEEE
Sbjct: 482 RMTYDTIDMEEMETAPTFDMSSLTQPRYDESDSDYEEDSEEE 523

[Close]

BLAST of Sed0028102 vs. NCBI nr
Match: XP_023538106.1 (transcription termination factor MTERF4, chloroplastic [Cucurbita pepo subsp. pepo] >XP_023538107.1 transcription termination factor MTERF4, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 934.1 bits (2413), Expect = 5.3e-268
Identity = 476/522 (91.19%), Postives = 497/522 (95.21%), Query Frame = 0


Query: 1   MIRGHAGLVKPNFSIMLFEMPTLKCHKFKLSTTSTFPAPAIHEKRRGLITKLQYSPGDRR 60
           MIRGH G+VKPNFSIML EMPTLKC KFK  TTSTF     HEKRRGLITKLQYS GDRR
Sbjct: 2   MIRGHTGVVKPNFSIMLLEMPTLKCQKFKFITTSTFQTSPNHEKRRGLITKLQYSRGDRR 61

Query: 61  TVSKSVQSTVTSKPYSSQVGRKEGSSSSLYSRPSLVEMKNVRLENRAKVYEFLRGIGVVP 120
           TVSKS+ ST+TSKPYSS+V RKEGS+SSLYSRPSLVEMKNVR ENRAKVYEFLRGIG+VP
Sbjct: 62  TVSKSLHSTITSKPYSSKVSRKEGSASSLYSRPSLVEMKNVRQENRAKVYEFLRGIGIVP 121

Query: 121 DELDGLELPVTIDVMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNMIPVLDYLGKLGVR 180
           DELDGLELPVT+DVMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNM+PVLDYLGKLGVR
Sbjct: 122 DELDGLELPVTVDVMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNMVPVLDYLGKLGVR 181

Query: 181 KSTFTEFLRRYPQVLHSSVVVDLAPVVKYLQGMDIKPSDVPRVLERYPEVLGFKLEGTMS 240
           KSTFTEFLRRYPQVLHSSVVVDL PVVKYLQGMDIKPSD+PRVLERYPEVLGFKLEGTMS
Sbjct: 182 KSTFTEFLRRYPQVLHSSVVVDLGPVVKYLQGMDIKPSDIPRVLERYPEVLGFKLEGTMS 241

Query: 241 TSVAYLVGIGVARREIGGVLTKYPEILGMRVARVIKPFVEYLESLGIPRLAVARLIENRP 300
           TSVAYLVGIGVARREIGGVLTKYPEILGMRVARVIKPFVEYLESLGIPRLAVARLIE RP
Sbjct: 242 TSVAYLVGIGVARREIGGVLTKYPEILGMRVARVIKPFVEYLESLGIPRLAVARLIEKRP 301

Query: 301 HILGFGLEKKVKPNIQLLLEFNVREAYLSSIVAQYAEIIGMDLETRLLSQRNLLKSIIEL 360
           HILGFGLEK+VKPNIQLLLEFNVREAYLSSIVAQYAEIIGMDLET+L SQRNLLKSIIEL
Sbjct: 302 HILGFGLEKRVKPNIQLLLEFNVREAYLSSIVAQYAEIIGMDLETKLPSQRNLLKSIIEL 361

Query: 361 DDDNFGTIIEKMPQIVSLSSSAVINHVDFLKNCGFSLLQVKNMVIGCPQLLALNLDIMKH 420
           D+DNFGTIIEKMPQ+VSLSSSAV +HVDFLK+CGFSL QVKNMVIGCPQLLALNLDIMKH
Sbjct: 362 DNDNFGTIIEKMPQVVSLSSSAVNSHVDFLKSCGFSLQQVKNMVIGCPQLLALNLDIMKH 421

Query: 421 SFQFFQKQMGRPLDDLVAFPAFFTYSLESTIKPRHRKVVQKGISCSLSWLLNCSDDKFVE 480
           SFQFFQK+MGRPLDDLVAFPAFFTY LESTIKPRHRKVVQKG++CSLSWLLNCSD+KF E
Sbjct: 422 SFQFFQKEMGRPLDDLVAFPAFFTYGLESTIKPRHRKVVQKGVTCSLSWLLNCSDEKFAE 481

Query: 481 RMSYDTIDMEEMETEPMFDMNSLVQPRNDESDSDYEEDSEEE 523
           RM+YDTIDMEEMET P FDM+SL QPR DESDSDYEEDSEEE
Sbjct: 482 RMTYDTIDMEEMETAPTFDMSSLTQPRYDESDSDYEEDSEEE 523

[Close]

BLAST of Sed0028102 vs. NCBI nr
Match: XP_022965673.1 (transcription termination factor MTERF4, chloroplastic [Cucurbita maxima] >XP_022965674.1 transcription termination factor MTERF4, chloroplastic [Cucurbita maxima] >XP_022965675.1 transcription termination factor MTERF4, chloroplastic [Cucurbita maxima])

HSP 1 Score: 929.5 bits (2401), Expect = 1.3e-266
Identity = 474/522 (90.80%), Postives = 494/522 (94.64%), Query Frame = 0


Query: 1   MIRGHAGLVKPNFSIMLFEMPTLKCHKFKLSTTSTFPAPAIHEKRRGLITKLQYSPGDRR 60
           MIRGH G+VKPNFSIML EMPTLKCHKFK  TTSTF A   HEKR  LITKLQYS GDR+
Sbjct: 2   MIRGHTGVVKPNFSIMLLEMPTLKCHKFKFGTTSTFQASPNHEKRGSLITKLQYSRGDRK 61

Query: 61  TVSKSVQSTVTSKPYSSQVGRKEGSSSSLYSRPSLVEMKNVRLENRAKVYEFLRGIGVVP 120
           TVSKS+ ST+TSKPYSS+V RKEGS+SSLYSRPSLVEMKNVR ENRAKVYEFLRGIG+VP
Sbjct: 62  TVSKSLHSTITSKPYSSKVSRKEGSASSLYSRPSLVEMKNVRQENRAKVYEFLRGIGIVP 121

Query: 121 DELDGLELPVTIDVMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNMIPVLDYLGKLGVR 180
           DELDGLELPVT+DVMKERVDFLLKLGL IEDINNYPLVLGCSVKKNM+PVLDYLGKLGVR
Sbjct: 122 DELDGLELPVTVDVMKERVDFLLKLGLAIEDINNYPLVLGCSVKKNMVPVLDYLGKLGVR 181

Query: 181 KSTFTEFLRRYPQVLHSSVVVDLAPVVKYLQGMDIKPSDVPRVLERYPEVLGFKLEGTMS 240
           KSTFTEFLRRYPQVLHSSVVVDL PVVKYLQGMDIKPSD+PRVLERYPEVLGFKLEGTMS
Sbjct: 182 KSTFTEFLRRYPQVLHSSVVVDLGPVVKYLQGMDIKPSDIPRVLERYPEVLGFKLEGTMS 241

Query: 241 TSVAYLVGIGVARREIGGVLTKYPEILGMRVARVIKPFVEYLESLGIPRLAVARLIENRP 300
           TSVAYLVGIGVARREIGGVLTKYPEILGMRVARVIKPFVEYLESLGIPRLAVARLIE RP
Sbjct: 242 TSVAYLVGIGVARREIGGVLTKYPEILGMRVARVIKPFVEYLESLGIPRLAVARLIEKRP 301

Query: 301 HILGFGLEKKVKPNIQLLLEFNVREAYLSSIVAQYAEIIGMDLETRLLSQRNLLKSIIEL 360
           HILGFGLEKKVKPNIQLLLEFNVREAYLSSIVAQYAEIIGMDLET+L SQRNLLKSIIEL
Sbjct: 302 HILGFGLEKKVKPNIQLLLEFNVREAYLSSIVAQYAEIIGMDLETKLPSQRNLLKSIIEL 361

Query: 361 DDDNFGTIIEKMPQIVSLSSSAVINHVDFLKNCGFSLLQVKNMVIGCPQLLALNLDIMKH 420
           D+DNFGTIIEKMPQ+VSLSSSAV +HVDFLK+CGFSL QVKNMVIGCPQLLALNLDIMKH
Sbjct: 362 DNDNFGTIIEKMPQVVSLSSSAVNSHVDFLKSCGFSLQQVKNMVIGCPQLLALNLDIMKH 421

Query: 421 SFQFFQKQMGRPLDDLVAFPAFFTYSLESTIKPRHRKVVQKGISCSLSWLLNCSDDKFVE 480
           SFQFFQK+MGRPLDDLVAFPAFFTY LESTIKPRHRKVV KGI+CSLSWLLNCSD+KF E
Sbjct: 422 SFQFFQKEMGRPLDDLVAFPAFFTYGLESTIKPRHRKVVHKGITCSLSWLLNCSDEKFAE 481

Query: 481 RMSYDTIDMEEMETEPMFDMNSLVQPRNDESDSDYEEDSEEE 523
           RM+YDTIDMEEMET P FDM+SL QPR DESDSDYEED EEE
Sbjct: 482 RMTYDTIDMEEMETAPSFDMSSLTQPRYDESDSDYEEDGEEE 523

[Close]

BLAST of Sed0028102 vs. ExPASy Swiss-Prot
Match: Q9ZT96 (Transcription termination factor MTERF4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF4 PE=1 SV=1)

HSP 1 Score: 687.2 bits (1772), Expect = 1.5e-196
Identity = 362/537 (67.41%), Postives = 433/537 (80.63%), Query Frame = 0


Query: 2   IRGHAGLVKPNFSIMLFEMPTLKCHKFKLSTTSTFPAPAIHEKR--RGLITKLQYSPGDR 61
           IR   G  KP F ++ FE P+    + +  + ST+     H+KR   G+   +Q +  +R
Sbjct: 3   IRFCNGFTKPGFLLVHFEPPSFFAVRSRSLSDSTYGNLCNHKKRPGTGIGLTVQCAIANR 62

Query: 62  RTVSKSVQS--TVTSKPYSSQVGR-------KEGSSSSLYSRPSLVEMKNVRLENRAKVY 121
           R  S+S+ S     S   SS  GR       K   S SLYSRPSL++M   +  NRAKVY
Sbjct: 63  RFSSRSLDSPRRERSSRSSSSSGRDRDRDKDKGRDSKSLYSRPSLLDMNKEKAANRAKVY 122

Query: 122 EFLRGIGVVPDELDGLELPVTIDVMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNMIPV 181
           EFLRGIG+VPDELDGLELPVT DVMKERV+FL KLGLTIEDINNYPLVLGCSVKKNM+PV
Sbjct: 123 EFLRGIGIVPDELDGLELPVTADVMKERVEFLHKLGLTIEDINNYPLVLGCSVKKNMVPV 182

Query: 182 LDYLGKLGVRKSTFTEFLRRYPQVLHSSVVVDLAPVVKYLQGMDIKPSDVPRVLERYPEV 241
           LDYLGKLGVRKSTFTEFLRRYPQVLHSSVV+DLAPVVKYLQG+DIKPSDVPRVLERYPEV
Sbjct: 183 LDYLGKLGVRKSTFTEFLRRYPQVLHSSVVIDLAPVVKYLQGLDIKPSDVPRVLERYPEV 242

Query: 242 LGFKLEGTMSTSVAYLVGIGVARREIGGVLTKYPEILGMRVARVIKPFVEYLESLGIPRL 301
           LGFKLEGTMSTSVAYLVGIGVARREIGG+LT+YPEILGMRVAR+IKP VEYLE LGIPRL
Sbjct: 243 LGFKLEGTMSTSVAYLVGIGVARREIGGILTRYPEILGMRVARIIKPLVEYLEVLGIPRL 302

Query: 302 AVARLIENRPHILGFGLEKKVKPNIQLLLEFNVREAYLSSIVAQYAEIIGMDLETRLLSQ 361
           A ARLIE RPHILGF L+  VKPN+Q+L +FNVRE  L SI+AQY EIIG+DL+ +L +Q
Sbjct: 303 AAARLIEKRPHILGFELDDTVKPNVQILQDFNVRETSLPSIIAQYPEIIGIDLKPKLDTQ 362

Query: 362 RNLLKSIIELDDDNFGTIIEKMPQIVSLSSSAVINHVDFLKNCGFSLLQVKNMVIGCPQL 421
           R LL S I L+ ++ G++IE+MPQ VSLS S ++ H+DFL  CGFS+ Q + MVIGCPQ+
Sbjct: 363 RKLLCSAIHLNPEDLGSLIERMPQFVSLSESPMLKHIDFLTKCGFSIDQTREMVIGCPQV 422

Query: 422 LALNLDIMKHSFQFFQKQMGRPLDDLVAFPAFFTYSLESTIKPRHRKVVQKGISCSLSWL 481
           LALNL IMK SF++FQK+M RPL DLV FPAFFTY LEST+KPRH+K+++KGI CSL+W+
Sbjct: 423 LALNLGIMKLSFEYFQKEMKRPLQDLVDFPAFFTYGLESTVKPRHKKIIKKGIKCSLAWM 482

Query: 482 LNCSDDKFVERMSYDTIDMEEMETEP-MFDMNSLVQP-RNDESDSDYEEDSEEEEKE 526
           LNCSD+KF +RMSYDTID+EE+ET+P  FDMN+L+QP R +ESDS+YEE+ +++++E
Sbjct: 483 LNCSDEKFEQRMSYDTIDIEEVETDPSSFDMNTLMQPEREEESDSEYEEEEDDDDEE 539

[Close]

BLAST of Sed0028102 vs. ExPASy Swiss-Prot
Match: Q6AUK6 (Transcription termination factor MTERF4, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0404000 PE=2 SV=1)

HSP 1 Score: 560.8 bits (1444), Expect = 1.6e-158
Identity = 278/443 (62.75%), Postives = 356/443 (80.36%), Query Frame = 0


Query: 86  SSSLYSRPSLVEMKNVRLENRAKVYEFLRGIGVVPDELDGLELPVTIDVMKERVDFLLKL 145
           SSSLY+RPSL++M+  R   RA V  FL  +GV P EL GLELP T+DVM+ERV+FL  L
Sbjct: 63  SSSLYARPSLLDMERGRAARRADVDAFLASLGVDPGELAGLELPATVDVMRERVEFLHSL 122

Query: 146 GLTIEDINNYPLVLGCSVKKNMIPVLDYLGKLGVRKSTFTEFLRRYPQVLHSSVVVDLAP 205
            L+ ED+  YPL LGCSV+KNM+PVLDYLGKLGVR+    + LRRYPQVLH+SVVVDLAP
Sbjct: 123 DLSNEDLAAYPLALGCSVRKNMVPVLDYLGKLGVRQDALPDLLRRYPQVLHASVVVDLAP 182

Query: 206 VVKYLQGMDIKPSDVPRVLERYPEVLGFKLEGTMSTSVAYLVGIGVARREIGGVLTKYPE 265
           VVKYLQGMD++P DVPRVLERYPE+LGFKLEGTMSTS+AYLVGIGVARR++G V+T++PE
Sbjct: 183 VVKYLQGMDVRPHDVPRVLERYPELLGFKLEGTMSTSIAYLVGIGVARRQVGSVITRFPE 242

Query: 266 ILGMRVARVIKPFVEYLESLGIPRLAVARLIENRPHILGFGLEKKVKPNIQLLLEFNVRE 325
           +LGMRV ++IKPFVE+LE +G+ RLA+AR+IE +P++LGFGLE KVKPNI+ LLEF VR+
Sbjct: 243 VLGMRVGKIIKPFVEHLEGIGLQRLAIARIIEKKPYVLGFGLEDKVKPNIEALLEFGVRK 302

Query: 326 AYLSSIVAQYAEIIGMDLETRLLSQRNLLKSIIELDDDNFGTIIEKMPQIVSLSSSAVIN 385
             L+ IVAQY +I+G++L  +L +Q++L +S I +  ++FG +IE+MPQ +SL  +AV+ 
Sbjct: 303 EALAFIVAQYPDILGIELRDKLATQQSLFESSILVSSEDFGRVIERMPQAISLGRTAVLK 362

Query: 386 HVDFLKNCGFSLLQVKNMVIGCPQLLALNLDIMKHSFQFFQKQMGRPLDDLVAFPAFFTY 445
           HV+FL +CGF L QV  MV+ CPQLLALN+DIMK SF++FQ +M R L++LV FPAFFTY
Sbjct: 363 HVNFLTSCGFLLSQVSKMVVACPQLLALNMDIMKMSFEYFQNEMERDLEELVEFPAFFTY 422

Query: 446 SLESTIKPRHRKVVQKGISCSLSWLLNCSDDKFVERMSYDTIDMEEMETEPMFDMNSLVQ 505
            LEST++PRH  V +KG +CSL+WLLNCSD KF ERM YDTI +EEME +  FD N+L +
Sbjct: 423 GLESTVRPRHEMVAKKGFTCSLAWLLNCSDAKFDERMKYDTIGIEEMEVDNSFDTNTLSE 482

Query: 506 PRNDE-SDSDYEEDSEEEEKEEE 528
              DE  D D +EDS+ +  ++E
Sbjct: 483 RVEDEVEDEDLDEDSDYDSTDDE 505

[Close]

BLAST of Sed0028102 vs. ExPASy Swiss-Prot
Match: B6TGN4 (Transcription termination factor MTERF4, chloroplastic OS=Zea mays OX=4577 GN=MTERF4 PE=2 SV=1)

HSP 1 Score: 550.1 bits (1416), Expect = 2.8e-155
Identity = 270/442 (61.09%), Postives = 357/442 (80.77%), Query Frame = 0


Query: 86  SSSLYSRPSLVEMKNVRLENRAKVYEFLRGIGVVPDELDGLELPVTIDVMKERVDFLLKL 145
           SSSLY+RPSL++M+  R   RA V  FL  +GV P EL GLELPVT+DVM+ER +FL  L
Sbjct: 54  SSSLYARPSLLDMERDRATRRADVDAFLTSLGVDPGELAGLELPVTVDVMRERAEFLGSL 113

Query: 146 GLTIEDINNYPLVLGCSVKKNMIPVLDYLGKLGVRKSTFTEFLRRYPQVLHSSVVVDLAP 205
           GLT ED+  YPL LGCSV+KNM+PVLDYLGKLGVR+    + LRRYPQVLH+SVVVDLAP
Sbjct: 114 GLTQEDLAAYPLALGCSVRKNMVPVLDYLGKLGVRRDALPDLLRRYPQVLHASVVVDLAP 173

Query: 206 VVKYLQGMDIKPSDVPRVLERYPEVLGFKLEGTMSTSVAYLVGIGVARREIGGVLTKYPE 265
           VVKYLQGMD++P+DVPRVLERYPE+LGFKLEGTMSTSVAYLVGIGV RR++G V+T++PE
Sbjct: 174 VVKYLQGMDVRPTDVPRVLERYPELLGFKLEGTMSTSVAYLVGIGVGRRQVGSVITRFPE 233

Query: 266 ILGMRVARVIKPFVEYLESLGIPRLAVARLIENRPHILGFGLEKKVKPNIQLLLEFNVRE 325
           +LGMRV ++IKPFVE+LE +G+ RLA+AR+IE +P++LGFGL++KVKPNI+ L++  VR+
Sbjct: 234 VLGMRVGKIIKPFVEHLEGIGLQRLAIARIIEKKPYVLGFGLQEKVKPNIEALVDIGVRK 293

Query: 326 AYLSSIVAQYAEIIGMDLETRLLSQRNLLKSIIELDDDNFGTIIEKMPQIVSLSSSAVIN 385
             L+SIV QY +++G++L  +L++Q++L +S I +  ++FG ++E+MPQ +SL  +AV+ 
Sbjct: 294 EALASIVMQYPDVLGLELRDKLVAQQSLFESSILVSREDFGRVLERMPQAISLGRAAVLK 353

Query: 386 HVDFLKNCGFSLLQVKNMVIGCPQLLALNLDIMKHSFQFFQKQMGRPLDDLVAFPAFFTY 445
           HV+FL  CGF L QV  MV+ CPQLLALN+DIM+ +F++F+ +M R L++LV FPAFFTY
Sbjct: 354 HVNFLTACGFMLSQVSKMVVACPQLLALNIDIMRMNFEYFKNEMERDLEELVEFPAFFTY 413

Query: 446 SLESTIKPRHRKVVQKGISCSLSWLLNCSDDKFVERMSYDTIDMEEMETEPMFDMNSLVQ 505
            +EST++PRH  V +KG++CSL+WLLNCSD KF ERM YDTI +EEME E   DMN+ V 
Sbjct: 414 GIESTVRPRHEMVSRKGLTCSLAWLLNCSDAKFDERMKYDTIGVEEMEREDSSDMNASV- 473

Query: 506 PRNDESDSDYEEDSEEEEKEEE 528
              DE +S+  EDS+  + ++E
Sbjct: 474 ---DEVESEEYEDSDYGDSDDE 491

[Close]

BLAST of Sed0028102 vs. ExPASy Swiss-Prot
Match: F4IHL3 (Transcription termination factor MTERF2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF2 PE=3 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 2.6e-31
Identity = 95/365 (26.03%), Postives = 185/365 (50.68%), Query Frame = 0


Query: 164 KKNMIPVLDYLGKLGVRKSTFTEFLRRYPQVLHSSVVVDLAPVVKYLQGMDIKPSDVPRV 223
           ++ +  +++YL   GVR+      + R P++L  S + ++   V +   M +  +D   +
Sbjct: 278 REELNEIVEYLESNGVRRDWMGYVVGRCPELLSFS-MEEVKSRVDFFLKMGMNQNDFGTM 337

Query: 224 LERYPEVLGFKLEGTMSTSVAYLVGIGVARREIGGVLTKYPEILGMRVARVIKPFVEYLE 283
           +  YP+++GF     M   + YL   G++  E+G +L   P ++G  +    KP V+Y  
Sbjct: 338 VYDYPKIIGFFSFQVMEKKINYLKEFGLSTEEVGRLLAYKPHLMGCSIEERWKPLVKYFY 397

Query: 284 SLGIPRLAVARLIENRPHILGFGLEKKVKPNIQLLLEFNVREAYLSSIVAQYAEIIGMDL 343
            LGIP+  + R++  +P +    LEK + P ++ L E  +    + +++ ++  ++   L
Sbjct: 398 YLGIPKEGMKRILVVKPILYCIDLEKTIAPKVRFLQEMGIPNEAIGNMLVKFPSLLTNSL 457

Query: 344 ETRLLSQRNLLKSIIELDDDNFGTIIEKMPQIVSLSSSAVIN-HVDFLKNCGFSLLQVKN 403
             ++      L +   +   + G +I   P ++  S    +  ++ +  + G    Q+  
Sbjct: 458 YKKIRPVVIFLLTRAGVTQKDIGKVIAMDPALLGCSIGTKLEPNMRYYISLGIRFYQLGE 517

Query: 404 MVIGCPQLLALNLDIMKHSFQFFQKQMGRPLDDLVAFPAFFTYSLESTIKPRHRKVVQKG 463
           M+   P LL  N+D ++  +++ ++ M RPL DL+ FP FF+YSLE  I PRH  +V+  
Sbjct: 518 MIADFPMLLRYNVDNLRPKYRYLRRTMIRPLQDLIEFPRFFSYSLERRIIPRHTIMVENR 577

Query: 464 ISCSLSWLLNCSDDKFVERMSYDTIDMEEMETEPMFDMNSLVQPRNDESDSDYEEDSEEE 523
           ++  L ++L C+D++F ER   D ++  E     +   +S  QP +DE+ SD E    +E
Sbjct: 578 VNFKLRYMLACTDEEF-ERRVRDKVERRERFEAGLDSEDS--QP-SDENISDQEIAFSDE 637

Query: 524 EKEEE 528
            +EEE
Sbjct: 638 AEEEE 637

[Close]

BLAST of Sed0028102 vs. ExPASy Swiss-Prot
Match: Q9SZL6 (Transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MTERF6 PE=2 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 7.4e-31
Identity = 68/276 (24.64%), Postives = 146/276 (52.90%), Query Frame = 0


Query: 215 IKPSDVPRVLERYPEVLGFKLEGTMSTSVAYLVGIGVARREIGGVLTKYPEILGMRVARV 274
           I+   +P ++ R P++L  +L+  +   V  L  +G   RE+   +TK+P IL   V   
Sbjct: 54  IQERKLPYIVSRCPKILTLRLDERLIPMVECLSSLGRNPREVASAITKFPPILSHSVEEK 113

Query: 275 IKPFVEYLESLGIPRLAVARLIENRPHILGFGLEKKVKPNIQLLLEFNV-REAYLSSIVA 334
           + P + + ++LG+P   + ++I   P ++ + ++ K+   +  L    + ++  +  ++ 
Sbjct: 114 LCPLLAFFQALGVPETQLGKMILFNPRLISYSIDTKLTVIVSFLASLGLDQDGMIGKVLV 173

Query: 335 QYAEIIGMDLETRLLSQRNLLKSIIELDDDNFGTIIEKMPQIVSLSSSAVIN-HVDFLKN 394
           +   ++G  ++ RL      LKS + L +D   +++   PQ++    + ++  + D+LK 
Sbjct: 174 KNPFLMGYSVDKRLRPTTEFLKSSVGLSEDGIKSVVMNFPQLLCRDVNKILKPNYDYLKE 233

Query: 395 CGFSLLQVKNMVIGCPQLLALNL-DIMKHSFQFFQKQMGRPLDDLVAFPAFFTYSLESTI 454
           CGF   Q+  MV G PQ+L  ++ + ++   +F  + MGR +D++ ++P FF + L+  +
Sbjct: 234 CGFGDSQIATMVTGYPQILIKSVKNSLQPRIRFLVQVMGRGMDEVASYPEFFHHGLKKKV 293

Query: 455 KPRHRKVVQKGISCSLSWLLNCSDDKFVERMSYDTI 488
           + R + V +  I CSL  +L+C+  KF E+  +  +
Sbjct: 294 ESRFKLVKKNNIDCSLREMLDCNTKKFHEKFGFSEV 329

[Close]

BLAST of Sed0028102 vs. ExPASy TrEMBL
Match: A0A6J1FDE7 (transcription termination factor MTERF4, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111444359 PE=3 SV=1)

HSP 1 Score: 934.1 bits (2413), Expect = 2.6e-268
Identity = 476/522 (91.19%), Postives = 497/522 (95.21%), Query Frame = 0


Query: 1   MIRGHAGLVKPNFSIMLFEMPTLKCHKFKLSTTSTFPAPAIHEKRRGLITKLQYSPGDRR 60
           MIRGH G+VKPNFSIML EMPTLKCHKFK  TTSTF     HEKRRGLITKLQYS GD R
Sbjct: 2   MIRGHTGVVKPNFSIMLLEMPTLKCHKFKFDTTSTFQTSPNHEKRRGLITKLQYSRGDWR 61

Query: 61  TVSKSVQSTVTSKPYSSQVGRKEGSSSSLYSRPSLVEMKNVRLENRAKVYEFLRGIGVVP 120
           TVSKS+ ST+TSKPYSS+VGRKEGS+SSLYSRPSLVEMKNVR ENRAKVYEFLRGIG+VP
Sbjct: 62  TVSKSLHSTITSKPYSSKVGRKEGSASSLYSRPSLVEMKNVRQENRAKVYEFLRGIGIVP 121

Query: 121 DELDGLELPVTIDVMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNMIPVLDYLGKLGVR 180
           DELDGLELPVT+DVMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNM+PVLDYLGKLGVR
Sbjct: 122 DELDGLELPVTVDVMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNMVPVLDYLGKLGVR 181

Query: 181 KSTFTEFLRRYPQVLHSSVVVDLAPVVKYLQGMDIKPSDVPRVLERYPEVLGFKLEGTMS 240
           KSTFTEFLRRYPQVLHSSVVVDL PVVKYLQGMDIKPSD+PRVLERYPEVLGFKLEGTMS
Sbjct: 182 KSTFTEFLRRYPQVLHSSVVVDLGPVVKYLQGMDIKPSDIPRVLERYPEVLGFKLEGTMS 241

Query: 241 TSVAYLVGIGVARREIGGVLTKYPEILGMRVARVIKPFVEYLESLGIPRLAVARLIENRP 300
           TSVAYLVGIGVARREIGGVLTKYPEILGMRVARVIKPFVEYLESLGIPRLAVARLIE RP
Sbjct: 242 TSVAYLVGIGVARREIGGVLTKYPEILGMRVARVIKPFVEYLESLGIPRLAVARLIEKRP 301

Query: 301 HILGFGLEKKVKPNIQLLLEFNVREAYLSSIVAQYAEIIGMDLETRLLSQRNLLKSIIEL 360
           HILGFGLEK+VKPNIQLLLEFNVREAYLSSIVAQYAEIIGMDLET+L SQRNLLKSIIEL
Sbjct: 302 HILGFGLEKRVKPNIQLLLEFNVREAYLSSIVAQYAEIIGMDLETKLPSQRNLLKSIIEL 361

Query: 361 DDDNFGTIIEKMPQIVSLSSSAVINHVDFLKNCGFSLLQVKNMVIGCPQLLALNLDIMKH 420
           D+DNFGTIIEKMPQ+VSLSSSAV +HVD LK+CGFSL QVKNMVIGCPQLLALNLDIMKH
Sbjct: 362 DNDNFGTIIEKMPQVVSLSSSAVNSHVDCLKSCGFSLQQVKNMVIGCPQLLALNLDIMKH 421

Query: 421 SFQFFQKQMGRPLDDLVAFPAFFTYSLESTIKPRHRKVVQKGISCSLSWLLNCSDDKFVE 480
           SFQFFQK+MGRPLDDLVAFPAFFTY LESTIKPRHRKVVQKG++CSLSWLLNCSD+KF E
Sbjct: 422 SFQFFQKEMGRPLDDLVAFPAFFTYGLESTIKPRHRKVVQKGVTCSLSWLLNCSDEKFAE 481

Query: 481 RMSYDTIDMEEMETEPMFDMNSLVQPRNDESDSDYEEDSEEE 523
           RM+YDTIDMEEMET P FDM+SL QPR DESDSDYEEDSEEE
Sbjct: 482 RMTYDTIDMEEMETAPTFDMSSLTQPRYDESDSDYEEDSEEE 523

[Close]

BLAST of Sed0028102 vs. ExPASy TrEMBL
Match: A0A6J1HPD6 (transcription termination factor MTERF4, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111465502 PE=3 SV=1)

HSP 1 Score: 929.5 bits (2401), Expect = 6.3e-267
Identity = 474/522 (90.80%), Postives = 494/522 (94.64%), Query Frame = 0


Query: 1   MIRGHAGLVKPNFSIMLFEMPTLKCHKFKLSTTSTFPAPAIHEKRRGLITKLQYSPGDRR 60
           MIRGH G+VKPNFSIML EMPTLKCHKFK  TTSTF A   HEKR  LITKLQYS GDR+
Sbjct: 2   MIRGHTGVVKPNFSIMLLEMPTLKCHKFKFGTTSTFQASPNHEKRGSLITKLQYSRGDRK 61

Query: 61  TVSKSVQSTVTSKPYSSQVGRKEGSSSSLYSRPSLVEMKNVRLENRAKVYEFLRGIGVVP 120
           TVSKS+ ST+TSKPYSS+V RKEGS+SSLYSRPSLVEMKNVR ENRAKVYEFLRGIG+VP
Sbjct: 62  TVSKSLHSTITSKPYSSKVSRKEGSASSLYSRPSLVEMKNVRQENRAKVYEFLRGIGIVP 121

Query: 121 DELDGLELPVTIDVMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNMIPVLDYLGKLGVR 180
           DELDGLELPVT+DVMKERVDFLLKLGL IEDINNYPLVLGCSVKKNM+PVLDYLGKLGVR
Sbjct: 122 DELDGLELPVTVDVMKERVDFLLKLGLAIEDINNYPLVLGCSVKKNMVPVLDYLGKLGVR 181

Query: 181 KSTFTEFLRRYPQVLHSSVVVDLAPVVKYLQGMDIKPSDVPRVLERYPEVLGFKLEGTMS 240
           KSTFTEFLRRYPQVLHSSVVVDL PVVKYLQGMDIKPSD+PRVLERYPEVLGFKLEGTMS
Sbjct: 182 KSTFTEFLRRYPQVLHSSVVVDLGPVVKYLQGMDIKPSDIPRVLERYPEVLGFKLEGTMS 241

Query: 241 TSVAYLVGIGVARREIGGVLTKYPEILGMRVARVIKPFVEYLESLGIPRLAVARLIENRP 300
           TSVAYLVGIGVARREIGGVLTKYPEILGMRVARVIKPFVEYLESLGIPRLAVARLIE RP
Sbjct: 242 TSVAYLVGIGVARREIGGVLTKYPEILGMRVARVIKPFVEYLESLGIPRLAVARLIEKRP 301

Query: 301 HILGFGLEKKVKPNIQLLLEFNVREAYLSSIVAQYAEIIGMDLETRLLSQRNLLKSIIEL 360
           HILGFGLEKKVKPNIQLLLEFNVREAYLSSIVAQYAEIIGMDLET+L SQRNLLKSIIEL
Sbjct: 302 HILGFGLEKKVKPNIQLLLEFNVREAYLSSIVAQYAEIIGMDLETKLPSQRNLLKSIIEL 361

Query: 361 DDDNFGTIIEKMPQIVSLSSSAVINHVDFLKNCGFSLLQVKNMVIGCPQLLALNLDIMKH 420
           D+DNFGTIIEKMPQ+VSLSSSAV +HVDFLK+CGFSL QVKNMVIGCPQLLALNLDIMKH
Sbjct: 362 DNDNFGTIIEKMPQVVSLSSSAVNSHVDFLKSCGFSLQQVKNMVIGCPQLLALNLDIMKH 421

Query: 421 SFQFFQKQMGRPLDDLVAFPAFFTYSLESTIKPRHRKVVQKGISCSLSWLLNCSDDKFVE 480
           SFQFFQK+MGRPLDDLVAFPAFFTY LESTIKPRHRKVV KGI+CSLSWLLNCSD+KF E
Sbjct: 422 SFQFFQKEMGRPLDDLVAFPAFFTYGLESTIKPRHRKVVHKGITCSLSWLLNCSDEKFAE 481

Query: 481 RMSYDTIDMEEMETEPMFDMNSLVQPRNDESDSDYEEDSEEE 523
           RM+YDTIDMEEMET P FDM+SL QPR DESDSDYEED EEE
Sbjct: 482 RMTYDTIDMEEMETAPSFDMSSLTQPRYDESDSDYEEDGEEE 523

[Close]

BLAST of Sed0028102 vs. ExPASy TrEMBL
Match: A0A6J1DUY1 (transcription termination factor MTERF4, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111023323 PE=3 SV=1)

HSP 1 Score: 916.8 bits (2368), Expect = 4.2e-263
Identity = 465/522 (89.08%), Postives = 497/522 (95.21%), Query Frame = 0


Query: 1   MIRGHAGLVKPNFSIMLFEMPTLKCHKFKLSTTSTFPAPAIHEKRRGLITKLQYSPGDRR 60
           MIR HAG+VKPNFSI++ +MPTLKC KF  +TTS F  P+  ++RRGLIT+LQYS GDRR
Sbjct: 2   MIRRHAGVVKPNFSIIVPKMPTLKCCKFTFTTTSIFQTPSNRDRRRGLITRLQYSDGDRR 61

Query: 61  TVSKSVQSTVTSKPYSSQVGRKEGSSSSLYSRPSLVEMKNVRLENRAKVYEFLRGIGVVP 120
           TVSKS+ ST+TSKP S++VGRKEGS+SSLYS PSLVEMKNVRLENRAKVYEFL GIG+VP
Sbjct: 62  TVSKSLHSTITSKPSSTRVGRKEGSASSLYSHPSLVEMKNVRLENRAKVYEFLCGIGIVP 121

Query: 121 DELDGLELPVTIDVMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNMIPVLDYLGKLGVR 180
           DELDGLELPVT+DVMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNMIPVLDYLGKLGVR
Sbjct: 122 DELDGLELPVTVDVMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNMIPVLDYLGKLGVR 181

Query: 181 KSTFTEFLRRYPQVLHSSVVVDLAPVVKYLQGMDIKPSDVPRVLERYPEVLGFKLEGTMS 240
           KSTFTEFLRRYPQVLH+SVVVDLAPVVKYLQGMDIKP+D+P VLERYPEVLGFKLEGTMS
Sbjct: 182 KSTFTEFLRRYPQVLHASVVVDLAPVVKYLQGMDIKPNDIPHVLERYPEVLGFKLEGTMS 241

Query: 241 TSVAYLVGIGVARREIGGVLTKYPEILGMRVARVIKPFVEYLESLGIPRLAVARLIENRP 300
           TSVAYLVGIGVAR+EIGGVLTKYP+ILGMRVARVIKPFVEYLESLGIPRLAVARLIE RP
Sbjct: 242 TSVAYLVGIGVARKEIGGVLTKYPDILGMRVARVIKPFVEYLESLGIPRLAVARLIEKRP 301

Query: 301 HILGFGLEKKVKPNIQLLLEFNVREAYLSSIVAQYAEIIGMDLETRLLSQRNLLKSIIEL 360
           HILGFGLEKKVKPNIQ+LL+FNVRE YLSSIVAQYAEIIGMDLET+LLSQRNLLKSIIEL
Sbjct: 302 HILGFGLEKKVKPNIQMLLKFNVREEYLSSIVAQYAEIIGMDLETKLLSQRNLLKSIIEL 361

Query: 361 DDDNFGTIIEKMPQIVSLSSSAVINHVDFLKNCGFSLLQVKNMVIGCPQLLALNLDIMKH 420
           DDDNFGTII KMPQIVSLSSSAVINHVDFLK+CGFSL+QVKNMVIGCPQLLALNLDIMKH
Sbjct: 362 DDDNFGTIIGKMPQIVSLSSSAVINHVDFLKSCGFSLVQVKNMVIGCPQLLALNLDIMKH 421

Query: 421 SFQFFQKQMGRPLDDLVAFPAFFTYSLESTIKPRHRKVVQKGISCSLSWLLNCSDDKFVE 480
           SFQFFQ +MGRPLDDLV FPAFFTY LESTIKPRHRKVVQKGI+CSLSWLLNCSD+KF E
Sbjct: 422 SFQFFQMEMGRPLDDLVTFPAFFTYGLESTIKPRHRKVVQKGITCSLSWLLNCSDEKFAE 481

Query: 481 RMSYDTIDMEEMETEPMFDMNSLVQPRNDESDSDYEEDSEEE 523
           RM+YDTIDMEEMET P FDMNSL+QPRND+SDSDYEEDSEEE
Sbjct: 482 RMTYDTIDMEEMETAPTFDMNSLIQPRNDDSDSDYEEDSEEE 523

[Close]

BLAST of Sed0028102 vs. ExPASy TrEMBL
Match: A0A1S3CR33 (transcription termination factor MTERF4, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103503367 PE=3 SV=1)

HSP 1 Score: 911.4 bits (2354), Expect = 1.8e-261
Identity = 466/523 (89.10%), Postives = 490/523 (93.69%), Query Frame = 0


Query: 1   MIRGHAGLVKPNFSIMLFEMPTLKCHKFKLSTTSTFPAPAIHEKRRGLITKLQYSPGDRR 60
           MIRGHAG+VKPN S MLFEM TL+CH FK + T TF    IHEKRR L T+LQYS GDRR
Sbjct: 1   MIRGHAGVVKPNVSFMLFEMSTLECHNFKFTATPTFLTSCIHEKRRCLTTQLQYSHGDRR 60

Query: 61  TVSKSVQSTVTSKPYSSQVGRKEGSS-SSLYSRPSLVEMKNVRLENRAKVYEFLRGIGVV 120
           TV KS+ ST++SKPYSS+VGRK GSS SSLYSRPSLVEMKNVRLENR+KVYEFLRGIGVV
Sbjct: 61  TVFKSLHSTISSKPYSSKVGRKGGSSGSSLYSRPSLVEMKNVRLENRSKVYEFLRGIGVV 120

Query: 121 PDELDGLELPVTIDVMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNMIPVLDYLGKLGV 180
           PDELDGLELPVT+DVMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNMIPVLDYLGKLGV
Sbjct: 121 PDELDGLELPVTVDVMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNMIPVLDYLGKLGV 180

Query: 181 RKSTFTEFLRRYPQVLHSSVVVDLAPVVKYLQGMDIKPSDVPRVLERYPEVLGFKLEGTM 240
           RKSTFTEFL+RYPQVLHSSVVVDLAPVVKYLQGMDIKP+D+PRVLERYPEVLGFKLEGTM
Sbjct: 181 RKSTFTEFLKRYPQVLHSSVVVDLAPVVKYLQGMDIKPNDIPRVLERYPEVLGFKLEGTM 240

Query: 241 STSVAYLVGIGVARREIGGVLTKYPEILGMRVARVIKPFVEYLESLGIPRLAVARLIENR 300
           STSVAYLVGIGVARREIGG+LTKYPEILGMRVARVIKPFVEYLE LGIPRLAVARLIE R
Sbjct: 241 STSVAYLVGIGVARREIGGILTKYPEILGMRVARVIKPFVEYLEGLGIPRLAVARLIEKR 300

Query: 301 PHILGFGLEKKVKPNIQLLLEFNVREAYLSSIVAQYAEIIGMDLETRLLSQRNLLKSIIE 360
           PHILGFGLEKKVKPNIQLLLEF VREAYL SIVAQYAEIIGMDLE  L +QRNLLKS+IE
Sbjct: 301 PHILGFGLEKKVKPNIQLLLEFKVREAYLPSIVAQYAEIIGMDLEANLQTQRNLLKSLIE 360

Query: 361 LDDDNFGTIIEKMPQIVSLSSSAVINHVDFLKNCGFSLLQVKNMVIGCPQLLALNLDIMK 420
           LD+DNFGTIIEKMPQIVSLS SAVINHVDFLK CGFSLLQVKNMVIGCPQLLALN+DIMK
Sbjct: 361 LDNDNFGTIIEKMPQIVSLSRSAVINHVDFLKTCGFSLLQVKNMVIGCPQLLALNIDIMK 420

Query: 421 HSFQFFQKQMGRPLDDLVAFPAFFTYSLESTIKPRHRKVVQKGISCSLSWLLNCSDDKFV 480
           HSF+FFQ +MGRPL+DL  FPAFFTY LESTIKPRHRKVVQKGISCSLSWLLNC+D+KFV
Sbjct: 421 HSFEFFQMEMGRPLEDLATFPAFFTYGLESTIKPRHRKVVQKGISCSLSWLLNCADEKFV 480

Query: 481 ERMSYDTIDMEEMETEPMFDMNSLVQPRNDESDSDYEEDSEEE 523
           ERMSYDTIDMEEMET P FDMNSLVQPRNDESDS+YEEDSEEE
Sbjct: 481 ERMSYDTIDMEEMETTPTFDMNSLVQPRNDESDSEYEEDSEEE 523

[Close]

BLAST of Sed0028102 vs. ExPASy TrEMBL
Match: A0A5A7VMZ0 (Transcription termination factor MTERF4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold5G00320 PE=3 SV=1)

HSP 1 Score: 911.4 bits (2354), Expect = 1.8e-261
Identity = 466/523 (89.10%), Postives = 490/523 (93.69%), Query Frame = 0


Query: 1   MIRGHAGLVKPNFSIMLFEMPTLKCHKFKLSTTSTFPAPAIHEKRRGLITKLQYSPGDRR 60
           MIRGHAG+VKPN S MLFEM TL+CH FK + T TF    IHEKRR L T+LQYS GDRR
Sbjct: 1   MIRGHAGVVKPNVSFMLFEMSTLECHNFKFTATPTFLTSCIHEKRRCLTTQLQYSHGDRR 60

Query: 61  TVSKSVQSTVTSKPYSSQVGRKEGSS-SSLYSRPSLVEMKNVRLENRAKVYEFLRGIGVV 120
           TV KS+ ST++SKPYSS+VGRK GSS SSLYSRPSLVEMKNVRLENR+KVYEFLRGIGVV
Sbjct: 61  TVFKSLHSTISSKPYSSKVGRKGGSSGSSLYSRPSLVEMKNVRLENRSKVYEFLRGIGVV 120

Query: 121 PDELDGLELPVTIDVMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNMIPVLDYLGKLGV 180
           PDELDGLELPVT+DVMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNMIPVLDYLGKLGV
Sbjct: 121 PDELDGLELPVTVDVMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNMIPVLDYLGKLGV 180

Query: 181 RKSTFTEFLRRYPQVLHSSVVVDLAPVVKYLQGMDIKPSDVPRVLERYPEVLGFKLEGTM 240
           RKSTFTEFL+RYPQVLHSSVVVDLAPVVKYLQGMDIKP+D+PRVLERYPEVLGFKLEGTM
Sbjct: 181 RKSTFTEFLKRYPQVLHSSVVVDLAPVVKYLQGMDIKPNDIPRVLERYPEVLGFKLEGTM 240

Query: 241 STSVAYLVGIGVARREIGGVLTKYPEILGMRVARVIKPFVEYLESLGIPRLAVARLIENR 300
           STSVAYLVGIGVARREIGG+LTKYPEILGMRVARVIKPFVEYLE LGIPRLAVARLIE R
Sbjct: 241 STSVAYLVGIGVARREIGGILTKYPEILGMRVARVIKPFVEYLEGLGIPRLAVARLIEKR 300

Query: 301 PHILGFGLEKKVKPNIQLLLEFNVREAYLSSIVAQYAEIIGMDLETRLLSQRNLLKSIIE 360
           PHILGFGLEKKVKPNIQLLLEF VREAYL SIVAQYAEIIGMDLE  L +QRNLLKS+IE
Sbjct: 301 PHILGFGLEKKVKPNIQLLLEFKVREAYLPSIVAQYAEIIGMDLEANLQTQRNLLKSLIE 360

Query: 361 LDDDNFGTIIEKMPQIVSLSSSAVINHVDFLKNCGFSLLQVKNMVIGCPQLLALNLDIMK 420
           LD+DNFGTIIEKMPQIVSLS SAVINHVDFLK CGFSLLQVKNMVIGCPQLLALN+DIMK
Sbjct: 361 LDNDNFGTIIEKMPQIVSLSRSAVINHVDFLKTCGFSLLQVKNMVIGCPQLLALNIDIMK 420

Query: 421 HSFQFFQKQMGRPLDDLVAFPAFFTYSLESTIKPRHRKVVQKGISCSLSWLLNCSDDKFV 480
           HSF+FFQ +MGRPL+DL  FPAFFTY LESTIKPRHRKVVQKGISCSLSWLLNC+D+KFV
Sbjct: 421 HSFEFFQMEMGRPLEDLATFPAFFTYGLESTIKPRHRKVVQKGISCSLSWLLNCADEKFV 480

Query: 481 ERMSYDTIDMEEMETEPMFDMNSLVQPRNDESDSDYEEDSEEE 523
           ERMSYDTIDMEEMET P FDMNSLVQPRNDESDS+YEEDSEEE
Sbjct: 481 ERMSYDTIDMEEMETTPTFDMNSLVQPRNDESDSEYEEDSEEE 523

[Close]

BLAST of Sed0028102 vs. TAIR 10
Match: AT4G02990.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 687.2 bits (1772), Expect = 1.0e-197
Identity = 362/537 (67.41%), Postives = 433/537 (80.63%), Query Frame = 0


Query: 2   IRGHAGLVKPNFSIMLFEMPTLKCHKFKLSTTSTFPAPAIHEKR--RGLITKLQYSPGDR 61
           IR   G  KP F ++ FE P+    + +  + ST+     H+KR   G+   +Q +  +R
Sbjct: 3   IRFCNGFTKPGFLLVHFEPPSFFAVRSRSLSDSTYGNLCNHKKRPGTGIGLTVQCAIANR 62

Query: 62  RTVSKSVQS--TVTSKPYSSQVGR-------KEGSSSSLYSRPSLVEMKNVRLENRAKVY 121
           R  S+S+ S     S   SS  GR       K   S SLYSRPSL++M   +  NRAKVY
Sbjct: 63  RFSSRSLDSPRRERSSRSSSSSGRDRDRDKDKGRDSKSLYSRPSLLDMNKEKAANRAKVY 122

Query: 122 EFLRGIGVVPDELDGLELPVTIDVMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNMIPV 181
           EFLRGIG+VPDELDGLELPVT DVMKERV+FL KLGLTIEDINNYPLVLGCSVKKNM+PV
Sbjct: 123 EFLRGIGIVPDELDGLELPVTADVMKERVEFLHKLGLTIEDINNYPLVLGCSVKKNMVPV 182

Query: 182 LDYLGKLGVRKSTFTEFLRRYPQVLHSSVVVDLAPVVKYLQGMDIKPSDVPRVLERYPEV 241
           LDYLGKLGVRKSTFTEFLRRYPQVLHSSVV+DLAPVVKYLQG+DIKPSDVPRVLERYPEV
Sbjct: 183 LDYLGKLGVRKSTFTEFLRRYPQVLHSSVVIDLAPVVKYLQGLDIKPSDVPRVLERYPEV 242

Query: 242 LGFKLEGTMSTSVAYLVGIGVARREIGGVLTKYPEILGMRVARVIKPFVEYLESLGIPRL 301
           LGFKLEGTMSTSVAYLVGIGVARREIGG+LT+YPEILGMRVAR+IKP VEYLE LGIPRL
Sbjct: 243 LGFKLEGTMSTSVAYLVGIGVARREIGGILTRYPEILGMRVARIIKPLVEYLEVLGIPRL 302

Query: 302 AVARLIENRPHILGFGLEKKVKPNIQLLLEFNVREAYLSSIVAQYAEIIGMDLETRLLSQ 361
           A ARLIE RPHILGF L+  VKPN+Q+L +FNVRE  L SI+AQY EIIG+DL+ +L +Q
Sbjct: 303 AAARLIEKRPHILGFELDDTVKPNVQILQDFNVRETSLPSIIAQYPEIIGIDLKPKLDTQ 362

Query: 362 RNLLKSIIELDDDNFGTIIEKMPQIVSLSSSAVINHVDFLKNCGFSLLQVKNMVIGCPQL 421
           R LL S I L+ ++ G++IE+MPQ VSLS S ++ H+DFL  CGFS+ Q + MVIGCPQ+
Sbjct: 363 RKLLCSAIHLNPEDLGSLIERMPQFVSLSESPMLKHIDFLTKCGFSIDQTREMVIGCPQV 422

Query: 422 LALNLDIMKHSFQFFQKQMGRPLDDLVAFPAFFTYSLESTIKPRHRKVVQKGISCSLSWL 481
           LALNL IMK SF++FQK+M RPL DLV FPAFFTY LEST+KPRH+K+++KGI CSL+W+
Sbjct: 423 LALNLGIMKLSFEYFQKEMKRPLQDLVDFPAFFTYGLESTVKPRHKKIIKKGIKCSLAWM 482

Query: 482 LNCSDDKFVERMSYDTIDMEEMETEP-MFDMNSLVQP-RNDESDSDYEEDSEEEEKE 526
           LNCSD+KF +RMSYDTID+EE+ET+P  FDMN+L+QP R +ESDS+YEE+ +++++E
Sbjct: 483 LNCSDEKFEQRMSYDTIDIEEVETDPSSFDMNTLMQPEREEESDSEYEEEEDDDDEE 539

[Close]

BLAST of Sed0028102 vs. TAIR 10
Match: AT2G44020.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 439.9 bits (1130), Expect = 2.9e-123
Identity = 212/430 (49.30%), Postives = 318/430 (73.95%), Query Frame = 0


Query: 95  LVEMKNVRLENRAKVYEFLRGIGVVPDELDGLELPVTIDVMKERVDFLLKLGLTIEDINN 154
           +++ K  +L NR K+ ++L+G+G++ DEL+ +ELP TI+VM ERV+FL KLGLTI+DIN 
Sbjct: 72  VIQGKKEKLVNRVKICDYLKGLGIITDELESIELPSTIEVMCERVEFLQKLGLTIDDINE 131

Query: 155 YPLVLGCSVKKNMIPVLDYLGKLGVRKSTFTEFLRRYPQVLHSSVVVDLAPVVKYLQGMD 214
           YPL+LGCSV+KN+IPVL YL K+G+ +S   EF++ YPQVLH+SVVV+LAPVVK+L+G+D
Sbjct: 132 YPLMLGCSVRKNLIPVLAYLEKIGISRSKLGEFVKNYPQVLHASVVVELAPVVKFLRGLD 191

Query: 215 IKPSDVPRVLERYPEVLGFKLEGTMSTSVAYLVGIGVARREIGGVLTKYPEILGMRVARV 274
           ++  D+  VL +YPE+LGFKLEGTMSTSVAYLV IGV+ R+IG ++T+YP +LGMRV  +
Sbjct: 192 VEKQDLGYVLMKYPELLGFKLEGTMSTSVAYLVSIGVSPRDIGPMVTQYPYLLGMRVGTM 251

Query: 275 IKPFVEYLESLGIPRLAVARLIENRPHILGFGLEKKVKPNIQLLLEFNVREAYLSSIVAQ 334
           IKP V+YL S+G+P+  VAR++E R +I+G+ LE+ VKPN+  L+ F V++  L  ++AQ
Sbjct: 252 IKPLVDYLISIGLPKKIVARMLEKRSYIVGYNLEETVKPNVDCLISFGVKKELLPLLIAQ 311

Query: 335 YAEIIGMDLETRLLSQRNLLKSIIELDDDNFGTIIEKMPQIVSLSSSAVINHVDFLKNCG 394
           Y +I+G+ ++ ++ +Q+      +++D + F  ++EKMPQIVSL  + ++  ++FL    
Sbjct: 312 YPQILGLPVKAKMSTQQYFFSLKLKIDPEGFARVVEKMPQIVSLKQNVIMKPIEFLLGRA 371

Query: 395 FSLLQVKNMVIGCPQLLALNLDIMKHSFQFFQKQMGRPLDDLVAFPAFFTYSLESTIKPR 454
           F +  +  MV+ CPQ+L   +++MK+S+ F++ +MGRP+ +LV +P +FTYSLES IKPR
Sbjct: 372 FQVEDIAKMVVRCPQILCSRVELMKNSYYFYKTEMGRPMKELVEYPEYFTYSLESRIKPR 431

Query: 455 HRKVVQKGISCSLSWLLNCSDDKFVERMSYDTIDMEEMETE-PMFDMNSLVQPRNDESDS 514
           ++K+  KGI  SL+W LNCSD +F ER+  + ID    +TE P FDM   ++    E  +
Sbjct: 432 YQKLQSKGIRSSLNWFLNCSDQRFEERLQGNFID---PDTEGPTFDMGGKLEMPGGEIVT 491

Query: 515 DYEEDSEEEE 524
           D EED  ++E
Sbjct: 492 DEEEDESDDE 498

[Close]

BLAST of Sed0028102 vs. TAIR 10
Match: AT2G21710.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 138.3 bits (347), Expect = 1.8e-32
Identity = 95/365 (26.03%), Postives = 185/365 (50.68%), Query Frame = 0


Query: 164 KKNMIPVLDYLGKLGVRKSTFTEFLRRYPQVLHSSVVVDLAPVVKYLQGMDIKPSDVPRV 223
           ++ +  +++YL   GVR+      + R P++L  S + ++   V +   M +  +D   +
Sbjct: 278 REELNEIVEYLESNGVRRDWMGYVVGRCPELLSFS-MEEVKSRVDFFLKMGMNQNDFGTM 337

Query: 224 LERYPEVLGFKLEGTMSTSVAYLVGIGVARREIGGVLTKYPEILGMRVARVIKPFVEYLE 283
           +  YP+++GF     M   + YL   G++  E+G +L   P ++G  +    KP V+Y  
Sbjct: 338 VYDYPKIIGFFSFQVMEKKINYLKEFGLSTEEVGRLLAYKPHLMGCSIEERWKPLVKYFY 397

Query: 284 SLGIPRLAVARLIENRPHILGFGLEKKVKPNIQLLLEFNVREAYLSSIVAQYAEIIGMDL 343
            LGIP+  + R++  +P +    LEK + P ++ L E  +    + +++ ++  ++   L
Sbjct: 398 YLGIPKEGMKRILVVKPILYCIDLEKTIAPKVRFLQEMGIPNEAIGNMLVKFPSLLTNSL 457

Query: 344 ETRLLSQRNLLKSIIELDDDNFGTIIEKMPQIVSLSSSAVIN-HVDFLKNCGFSLLQVKN 403
             ++      L +   +   + G +I   P ++  S    +  ++ +  + G    Q+  
Sbjct: 458 YKKIRPVVIFLLTRAGVTQKDIGKVIAMDPALLGCSIGTKLEPNMRYYISLGIRFYQLGE 517

Query: 404 MVIGCPQLLALNLDIMKHSFQFFQKQMGRPLDDLVAFPAFFTYSLESTIKPRHRKVVQKG 463
           M+   P LL  N+D ++  +++ ++ M RPL DL+ FP FF+YSLE  I PRH  +V+  
Sbjct: 518 MIADFPMLLRYNVDNLRPKYRYLRRTMIRPLQDLIEFPRFFSYSLERRIIPRHTIMVENR 577

Query: 464 ISCSLSWLLNCSDDKFVERMSYDTIDMEEMETEPMFDMNSLVQPRNDESDSDYEEDSEEE 523
           ++  L ++L C+D++F ER   D ++  E     +   +S  QP +DE+ SD E    +E
Sbjct: 578 VNFKLRYMLACTDEEF-ERRVRDKVERRERFEAGLDSEDS--QP-SDENISDQEIAFSDE 637

Query: 524 EKEEE 528
            +EEE
Sbjct: 638 AEEEE 637

[Close]

BLAST of Sed0028102 vs. TAIR 10
Match: AT4G38160.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 136.7 bits (343), Expect = 5.3e-32
Identity = 68/276 (24.64%), Postives = 146/276 (52.90%), Query Frame = 0


Query: 215 IKPSDVPRVLERYPEVLGFKLEGTMSTSVAYLVGIGVARREIGGVLTKYPEILGMRVARV 274
           I+   +P ++ R P++L  +L+  +   V  L  +G   RE+   +TK+P IL   V   
Sbjct: 54  IQERKLPYIVSRCPKILTLRLDERLIPMVECLSSLGRNPREVASAITKFPPILSHSVEEK 113

Query: 275 IKPFVEYLESLGIPRLAVARLIENRPHILGFGLEKKVKPNIQLLLEFNV-REAYLSSIVA 334
           + P + + ++LG+P   + ++I   P ++ + ++ K+   +  L    + ++  +  ++ 
Sbjct: 114 LCPLLAFFQALGVPETQLGKMILFNPRLISYSIDTKLTVIVSFLASLGLDQDGMIGKVLV 173

Query: 335 QYAEIIGMDLETRLLSQRNLLKSIIELDDDNFGTIIEKMPQIVSLSSSAVIN-HVDFLKN 394
           +   ++G  ++ RL      LKS + L +D   +++   PQ++    + ++  + D+LK 
Sbjct: 174 KNPFLMGYSVDKRLRPTTEFLKSSVGLSEDGIKSVVMNFPQLLCRDVNKILKPNYDYLKE 233

Query: 395 CGFSLLQVKNMVIGCPQLLALNL-DIMKHSFQFFQKQMGRPLDDLVAFPAFFTYSLESTI 454
           CGF   Q+  MV G PQ+L  ++ + ++   +F  + MGR +D++ ++P FF + L+  +
Sbjct: 234 CGFGDSQIATMVTGYPQILIKSVKNSLQPRIRFLVQVMGRGMDEVASYPEFFHHGLKKKV 293

Query: 455 KPRHRKVVQKGISCSLSWLLNCSDDKFVERMSYDTI 488
           + R + V +  I CSL  +L+C+  KF E+  +  +
Sbjct: 294 ESRFKLVKKNNIDCSLREMLDCNTKKFHEKFGFSEV 329

[Close]

BLAST of Sed0028102 vs. TAIR 10
Match: AT4G38160.2 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 136.7 bits (343), Expect = 5.3e-32
Identity = 68/276 (24.64%), Postives = 146/276 (52.90%), Query Frame = 0


Query: 215 IKPSDVPRVLERYPEVLGFKLEGTMSTSVAYLVGIGVARREIGGVLTKYPEILGMRVARV 274
           I+   +P ++ R P++L  +L+  +   V  L  +G   RE+   +TK+P IL   V   
Sbjct: 54  IQERKLPYIVSRCPKILTLRLDERLIPMVECLSSLGRNPREVASAITKFPPILSHSVEEK 113

Query: 275 IKPFVEYLESLGIPRLAVARLIENRPHILGFGLEKKVKPNIQLLLEFNV-REAYLSSIVA 334
           + P + + ++LG+P   + ++I   P ++ + ++ K+   +  L    + ++  +  ++ 
Sbjct: 114 LCPLLAFFQALGVPETQLGKMILFNPRLISYSIDTKLTVIVSFLASLGLDQDGMIGKVLV 173

Query: 335 QYAEIIGMDLETRLLSQRNLLKSIIELDDDNFGTIIEKMPQIVSLSSSAVIN-HVDFLKN 394
           +   ++G  ++ RL      LKS + L +D   +++   PQ++    + ++  + D+LK 
Sbjct: 174 KNPFLMGYSVDKRLRPTTEFLKSSVGLSEDGIKSVVMNFPQLLCRDVNKILKPNYDYLKE 233

Query: 395 CGFSLLQVKNMVIGCPQLLALNL-DIMKHSFQFFQKQMGRPLDDLVAFPAFFTYSLESTI 454
           CGF   Q+  MV G PQ+L  ++ + ++   +F  + MGR +D++ ++P FF + L+  +
Sbjct: 234 CGFGDSQIATMVTGYPQILIKSVKNSLQPRIRFLVQVMGRGMDEVASYPEFFHHGLKKKV 293

Query: 455 KPRHRKVVQKGISCSLSWLLNCSDDKFVERMSYDTI 488
           + R + V +  I CSL  +L+C+  KF E+  +  +
Sbjct: 294 ESRFKLVKKNNIDCSLREMLDCNTKKFHEKFGFSEV 329

The following BLAST results are available for this feature:

BLAST of Sed0028102 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7021053.1	1.8e-268	91.00	Transcription termination factor MTERF4, chloroplastic, partial [Cucurbita argyr...	[more]
KAG6586221.1	3.1e-268	91.00	Transcription termination factor MTERF4, chloroplastic, partial [Cucurbita argyr...	[more]
XP_022938209.1	5.3e-268	91.19	transcription termination factor MTERF4, chloroplastic [Cucurbita moschata] >XP_...	[more]
XP_023538106.1	5.3e-268	91.19	transcription termination factor MTERF4, chloroplastic [Cucurbita pepo subsp. pe...	[more]
XP_022965673.1	1.3e-266	90.80	transcription termination factor MTERF4, chloroplastic [Cucurbita maxima] >XP_02...	[more]

BLAST of Sed0028102 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZT96	1.5e-196	67.41	Transcription termination factor MTERF4, chloroplastic OS=Arabidopsis thaliana O...	[more]
Q6AUK6	1.6e-158	62.75	Transcription termination factor MTERF4, chloroplastic OS=Oryza sativa subsp. ja...	[more]
B6TGN4	2.8e-155	61.09	Transcription termination factor MTERF4, chloroplastic OS=Zea mays OX=4577 GN=MT...	[more]
F4IHL3	2.6e-31	26.03	Transcription termination factor MTERF2, chloroplastic OS=Arabidopsis thaliana O...	[more]
Q9SZL6	7.4e-31	24.64	Transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Arabidop...	[more]

BLAST of Sed0028102 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FDE7	2.6e-268	91.19	transcription termination factor MTERF4, chloroplastic OS=Cucurbita moschata OX=...	[more]
A0A6J1HPD6	6.3e-267	90.80	transcription termination factor MTERF4, chloroplastic OS=Cucurbita maxima OX=36...	[more]
A0A6J1DUY1	4.2e-263	89.08	transcription termination factor MTERF4, chloroplastic OS=Momordica charantia OX...	[more]
A0A1S3CR33	1.8e-261	89.10	transcription termination factor MTERF4, chloroplastic OS=Cucumis melo OX=3656 G...	[more]
A0A5A7VMZ0	1.8e-261	89.10	Transcription termination factor MTERF4 OS=Cucumis melo var. makuwa OX=1194695 G...	[more]

BLAST of Sed0028102 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G02990.1	1.0e-197	67.41	Mitochondrial transcription termination factor family protein	[more]
AT2G44020.1	2.9e-123	49.30	Mitochondrial transcription termination factor family protein	[more]
AT2G21710.1	1.8e-32	26.03	Mitochondrial transcription termination factor family protein	[more]
AT4G38160.1	5.3e-32	24.64	Mitochondrial transcription termination factor family protein	[more]
AT4G38160.2	5.3e-32	24.64	Mitochondrial transcription termination factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	SMART	SM00733	mt_12	coord: 433..464 e-value: 0.0025 score: 27.1 coord: 257..288 e-value: 1.1E-4 score: 31.6 coord: 401..432 e-value: 0.49 score: 19.5 coord: 185..216 e-value: 7.6E-4 score: 28.8 coord: 86..119 e-value: 770.0 score: 4.8 coord: 221..252 e-value: 0.0053 score: 26.0 coord: 366..396 e-value: 0.034 score: 23.3 coord: 293..324 e-value: 0.0017 score: 27.6 coord: 329..361 e-value: 180.0 score: 9.6 coord: 149..180 e-value: 0.0039 score: 26.4
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PFAM	PF02536	mTERF	coord: 171..478 e-value: 1.0E-104 score: 349.9
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PANTHER	PTHR13068	CGI-12 PROTEIN-RELATED	coord: 31..513
IPR038538	MTERF superfamily, mitochondrial/chloroplastic	GENE3D	1.25.70.10	Transcription termination factor 3, mitochondrial	coord: 134..275 e-value: 2.7E-25 score: 91.0 coord: 276..489 e-value: 2.4E-49 score: 169.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 497..528
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 511..528
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 59..89
None	No IPR available	PANTHER	PTHR13068:SF109	TRANSCRIPTION TERMINATION FACTOR MTERF4, CHLOROPLASTIC	coord: 31..513

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0028102.1	Sed0028102.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006353	DNA-templated transcription, termination
biological_process	GO:0009793	embryo development ending in seed dormancy
biological_process	GO:0042794	plastid rRNA transcription
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0008380	RNA splicing
cellular_component	GO:0009536	plastid
molecular_function	GO:0003690	double-stranded DNA binding
molecular_function	GO:0003729	mRNA binding