Sed0027922 (gene) Chayote v1

Overview


Name	Sed0027922
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Pentatricopeptide repeat-containing protein
Location	LG06: 2141195 .. 2143504 (+)
RNA-Seq Expression	Sed0027922
Synteny	Sed0027922

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGCAACGCTTCACTAGCCATCCTCGAACCTTCCTTCGCCTCGCGGGCCCTTTACTCGAAATGGGTCACCACAAATCTTGTTCGACATGTGCTCCACAGCTTCAAGTCTCCGAGCTCGATCAAACCATGGGTTCGGTACACTTCATTTCCTTAAACTCTTGTTTTCATCTCTTGGGACTTTGTAAGCACATTGATACCCTCATCAAGTTTCATGGGTTGTTAATTGTTCACGGCCTTGTTGGTAATCTTCTTTGTGATACCAAGTTAGTCGGTGTTTATGGCGCACTTGGGGATGTGGGTTCTGCGCGCAAGGTGTTCGATCAAATGCCTGACCCAGATTTTTATGCGTGGAAGGTCATGGTCAGGTGGTATTTTTTGAATGATATGTTTGTGGGTGTTATTCCGTTTTATAATCGCATGAGACTGTCTTTTAGGGATTGTGATAACATTATTTTTTCGATTATTTTGAAAGCTTGTAGTGAATTGCGTGAAATTGTTGAAGGGAGAAAGGTTCATTGCCAGATTGTTAAGGTTGGGGGTCCTGATGGTTTTGTATTGACTGGTTTGATTGATATGTATGCAAAATGTGGGCAGATTAGCTGCTCAAGTGTTGTGTTTGAAGGAATTGTTGATAAGGATGTGGTTTCTTGGACTTCTATGATTTCGGGTTATGTTCAAAATGATTGTGCAGAGGAGGGTCTGATTCTATTCAATCGGATGAGAGAAGCTTTGGTTGTGAGCAACCAATTTACTTTTGGGAGTATAATCAGTGCGTGTACAAAATTAAGAGCCTTGCATCAGGGGAAATGGGTACATGGCTATGCCATTAAGAACGTTGTTCAACTTAGCACTTTCGTAGCGACCGCGTTCTTAGATATGTATGTTAAATGTGGGCAAACTAGAGAAGCTCGTATGATATTCGATGGGCTACCTATTATTGATTTGGTTTCATGGACTGCAATGATTGTTGGGTATACCCAAGCTGGCCAACCTACTGAGGCATTGAGGCTTTTCACTGATGAAATAAGGTATGATCTCCTACCTAACTCTGTTACTGCTGCAAGTGTTCTTTCATCGTGTTCGGTTTCTGGTAATTTAAGTTTAGGAATGTCAGTTCATGGACTTGCCATTAAACTTTGGCTGGAAGAGTGTGCAGTGAAAAATGCTCTTATTGACATGTATGCTAAATGCAATTTGATTGACGATGCTCGTGTTATATTTCACGGGGTTTTCGAAAAAGATGTGATTACTTGGAACTCTATGATAAGTGGGTATGCTCAGAATGGGTCTGCATATGAAGCTCTCTGGCTCTTTAATCAAATGAGAACAGAGTCCTCTGCCCCTGATGCAATAACACTGGTGAGTACCCTTTCAGCTTCTGCCATCCTAGGTGCGGTACAAGTCGGTTCATCACTTCATGCTTACTCAATAAAAGAAGGCTTATTTTCATCTAATCTTTACATTGGCACTGCACTTCTGAACTTTTATGCCAAATGTGGCGATGCTAAGTCAGCACGGATGGTGTTCGACAGTATGGGAGATAAGAACATTATCACGTGGAGTGCGATGATAGGTGGTTATGGAGTGCAGGGTGATGGAAGTGGATCCCTTGCCATTTTCTCTGACATGTTGAAGGAGGATTTGAAACCCAATGAAATAATTTTCACGACGGTTTTATCTGCTTGTAGCTATTCCGGAATGGTTGAAGAGGGATGGAGATATTTCAAATCAATGAGTGAGGATTATAACTTTGCACCATCCATGAAACACTATGCTTGTATGGTTGATCTCTTAGCTCGATCTGGTAGACTGGATGAAGCATTGGACTTTATTAAGAAAATGCCGATTCAACCGAACATCAGTTTGTATGGAGCTTTTCTTCATGGATGTGGATTATATTCAAGGTTTGATCTTGGAGAAATGGCAGTGAAGGAAATGTTGCAGCTTCATCCAAATGAAGCTTGCTATTATGTGCTTTTGTCTAACTTGTACGCTTCAGATGGGAGATGGGGTCAAGTTAATGAGATAAGGCAGTTGATGTTACAAAGAGGATTGAACAAAGTCCCAGGGTATAGCCAAGTAGAAACTAATTGACTAATGTTGTTCGTATCTTCACGTTTCCGTTGAGATAATCAGGTGACCGTACTCGGTAATACTGATCTATATATGCTTCGTTTACCGCTGACTACATCTACTCAGCTGAAATCCTCATTCTAGCAGACTCACTTTCTTATGACTAGTTGTTCATCAATAGAAAAGACTGGTGGTCAGCGTAAAACCATCACGCCTTCCGTGGTGAGCGACTGA

mRNA sequence

ATGTTGCAACGCTTCACTAGCCATCCTCGAACCTTCCTTCGCCTCGCGGGCCCTTTACTCGAAATGGGTCACCACAAATCTTGTTCGACATGTGCTCCACAGCTTCAAGTCTCCGAGCTCGATCAAACCATGGGTTCGGTACACTTCATTTCCTTAAACTCTTGTTTTCATCTCTTGGGACTTTGTAAGCACATTGATACCCTCATCAAGTTTCATGGGTTGTTAATTGTTCACGGCCTTGTTGGTAATCTTCTTTGTGATACCAAGTTAGTCGGTGTTTATGGCGCACTTGGGGATGTGGGTTCTGCGCGCAAGGTGTTCGATCAAATGCCTGACCCAGATTTTTATGCGTGGAAGGTCATGGTCAGGTGGTATTTTTTGAATGATATGTTTGTGGGTGTTATTCCGTTTTATAATCGCATGAGACTGTCTTTTAGGGATTGTGATAACATTATTTTTTCGATTATTTTGAAAGCTTGTAGTGAATTGCGTGAAATTGTTGAAGGGAGAAAGGTTCATTGCCAGATTGTTAAGGTTGGGGGTCCTGATGGTTTTGTATTGACTGGTTTGATTGATATGTATGCAAAATGTGGGCAGATTAGCTGCTCAAGTGTTGTGTTTGAAGGAATTGTTGATAAGGATGTGGTTTCTTGGACTTCTATGATTTCGGGTTATGTTCAAAATGATTGTGCAGAGGAGGGTCTGATTCTATTCAATCGGATGAGAGAAGCTTTGGTTGTGAGCAACCAATTTACTTTTGGGAGTATAATCAGTGCGTGTACAAAATTAAGAGCCTTGCATCAGGGGAAATGGGTACATGGCTATGCCATTAAGAACGTTGTTCAACTTAGCACTTTCGTAGCGACCGCGTTCTTAGATATGTATGTTAAATGTGGGCAAACTAGAGAAGCTCGTATGATATTCGATGGGCTACCTATTATTGATTTGGTTTCATGGACTGCAATGATTGTTGGGTATACCCAAGCTGGCCAACCTACTGAGGCATTGAGGCTTTTCACTGATGAAATAAGGTATGATCTCCTACCTAACTCTGTTACTGCTGCAAGTGTTCTTTCATCGTGTTCGGTTTCTGGTAATTTAAGTTTAGGAATGTCAGTTCATGGACTTGCCATTAAACTTTGGCTGGAAGAGTGTGCAGTGAAAAATGCTCTTATTGACATGTATGCTAAATGCAATTTGATTGACGATGCTCGTGTTATATTTCACGGGGTTTTCGAAAAAGATGTGATTACTTGGAACTCTATGATAAGTGGGTATGCTCAGAATGGGTCTGCATATGAAGCTCTCTGGCTCTTTAATCAAATGAGAACAGAGTCCTCTGCCCCTGATGCAATAACACTGGTGAGTACCCTTTCAGCTTCTGCCATCCTAGGTGCGGTACAAGTCGGTTCATCACTTCATGCTTACTCAATAAAAGAAGGCTTATTTTCATCTAATCTTTACATTGGCACTGCACTTCTGAACTTTTATGCCAAATGTGGCGATGCTAAGTCAGCACGGATGGTGTTCGACAGTATGGGAGATAAGAACATTATCACGTGGAGTGCGATGATAGGTGGTTATGGAGTGCAGGGTGATGGAAGTGGATCCCTTGCCATTTTCTCTGACATGTTGAAGGAGGATTTGAAACCCAATGAAATAATTTTCACGACGGTTTTATCTGCTTGTAGCTATTCCGGAATGGTTGAAGAGGGATGGAGATATTTCAAATCAATGAGTGAGGATTATAACTTTGCACCATCCATGAAACACTATGCTTGTATGGTTGATCTCTTAGCTCGATCTGGTAGACTGGATGAAGCATTGGACTTTATTAAGAAAATGCCGATTCAACCGAACATCAGTTTGTATGGAGCTTTTCTTCATGGATGTGGATTATATTCAAGGTTTGATCTTGGAGAAATGGCAGTGAAGGAAATGTTGCAGCTTCATCCAAATGAAGCTTGCTATTATGTGCTTTTGTCTAACTTGTACGCTTCAGATGGGAGATGGGGTCAAGTTAATGAGATAAGGCAGTTGATGTTACAAAGAGGATTGAACAAAGTCCCAGGTTGTTCATCAATAGAAAAGACTGGTGGTCAGCGTAAAACCATCACGCCTTCCGTGGTGAGCGACTGA

Coding sequence (CDS)

ATGTTGCAACGCTTCACTAGCCATCCTCGAACCTTCCTTCGCCTCGCGGGCCCTTTACTCGAAATGGGTCACCACAAATCTTGTTCGACATGTGCTCCACAGCTTCAAGTCTCCGAGCTCGATCAAACCATGGGTTCGGTACACTTCATTTCCTTAAACTCTTGTTTTCATCTCTTGGGACTTTGTAAGCACATTGATACCCTCATCAAGTTTCATGGGTTGTTAATTGTTCACGGCCTTGTTGGTAATCTTCTTTGTGATACCAAGTTAGTCGGTGTTTATGGCGCACTTGGGGATGTGGGTTCTGCGCGCAAGGTGTTCGATCAAATGCCTGACCCAGATTTTTATGCGTGGAAGGTCATGGTCAGGTGGTATTTTTTGAATGATATGTTTGTGGGTGTTATTCCGTTTTATAATCGCATGAGACTGTCTTTTAGGGATTGTGATAACATTATTTTTTCGATTATTTTGAAAGCTTGTAGTGAATTGCGTGAAATTGTTGAAGGGAGAAAGGTTCATTGCCAGATTGTTAAGGTTGGGGGTCCTGATGGTTTTGTATTGACTGGTTTGATTGATATGTATGCAAAATGTGGGCAGATTAGCTGCTCAAGTGTTGTGTTTGAAGGAATTGTTGATAAGGATGTGGTTTCTTGGACTTCTATGATTTCGGGTTATGTTCAAAATGATTGTGCAGAGGAGGGTCTGATTCTATTCAATCGGATGAGAGAAGCTTTGGTTGTGAGCAACCAATTTACTTTTGGGAGTATAATCAGTGCGTGTACAAAATTAAGAGCCTTGCATCAGGGGAAATGGGTACATGGCTATGCCATTAAGAACGTTGTTCAACTTAGCACTTTCGTAGCGACCGCGTTCTTAGATATGTATGTTAAATGTGGGCAAACTAGAGAAGCTCGTATGATATTCGATGGGCTACCTATTATTGATTTGGTTTCATGGACTGCAATGATTGTTGGGTATACCCAAGCTGGCCAACCTACTGAGGCATTGAGGCTTTTCACTGATGAAATAAGGTATGATCTCCTACCTAACTCTGTTACTGCTGCAAGTGTTCTTTCATCGTGTTCGGTTTCTGGTAATTTAAGTTTAGGAATGTCAGTTCATGGACTTGCCATTAAACTTTGGCTGGAAGAGTGTGCAGTGAAAAATGCTCTTATTGACATGTATGCTAAATGCAATTTGATTGACGATGCTCGTGTTATATTTCACGGGGTTTTCGAAAAAGATGTGATTACTTGGAACTCTATGATAAGTGGGTATGCTCAGAATGGGTCTGCATATGAAGCTCTCTGGCTCTTTAATCAAATGAGAACAGAGTCCTCTGCCCCTGATGCAATAACACTGGTGAGTACCCTTTCAGCTTCTGCCATCCTAGGTGCGGTACAAGTCGGTTCATCACTTCATGCTTACTCAATAAAAGAAGGCTTATTTTCATCTAATCTTTACATTGGCACTGCACTTCTGAACTTTTATGCCAAATGTGGCGATGCTAAGTCAGCACGGATGGTGTTCGACAGTATGGGAGATAAGAACATTATCACGTGGAGTGCGATGATAGGTGGTTATGGAGTGCAGGGTGATGGAAGTGGATCCCTTGCCATTTTCTCTGACATGTTGAAGGAGGATTTGAAACCCAATGAAATAATTTTCACGACGGTTTTATCTGCTTGTAGCTATTCCGGAATGGTTGAAGAGGGATGGAGATATTTCAAATCAATGAGTGAGGATTATAACTTTGCACCATCCATGAAACACTATGCTTGTATGGTTGATCTCTTAGCTCGATCTGGTAGACTGGATGAAGCATTGGACTTTATTAAGAAAATGCCGATTCAACCGAACATCAGTTTGTATGGAGCTTTTCTTCATGGATGTGGATTATATTCAAGGTTTGATCTTGGAGAAATGGCAGTGAAGGAAATGTTGCAGCTTCATCCAAATGAAGCTTGCTATTATGTGCTTTTGTCTAACTTGTACGCTTCAGATGGGAGATGGGGTCAAGTTAATGAGATAAGGCAGTTGATGTTACAAAGAGGATTGAACAAAGTCCCAGGTTGTTCATCAATAGAAAAGACTGGTGGTCAGCGTAAAACCATCACGCCTTCCGTGGTGAGCGACTGA

Protein sequence

MLQRFTSHPRTFLRLAGPLLEMGHHKSCSTCAPQLQVSELDQTMGSVHFISLNSCFHLLGLCKHIDTLIKFHGLLIVHGLVGNLLCDTKLVGVYGALGDVGSARKVFDQMPDPDFYAWKVMVRWYFLNDMFVGVIPFYNRMRLSFRDCDNIIFSIILKACSELREIVEGRKVHCQIVKVGGPDGFVLTGLIDMYAKCGQISCSSVVFEGIVDKDVVSWTSMISGYVQNDCAEEGLILFNRMREALVVSNQFTFGSIISACTKLRALHQGKWVHGYAIKNVVQLSTFVATAFLDMYVKCGQTREARMIFDGLPIIDLVSWTAMIVGYTQAGQPTEALRLFTDEIRYDLLPNSVTAASVLSSCSVSGNLSLGMSVHGLAIKLWLEECAVKNALIDMYAKCNLIDDARVIFHGVFEKDVITWNSMISGYAQNGSAYEALWLFNQMRTESSAPDAITLVSTLSASAILGAVQVGSSLHAYSIKEGLFSSNLYIGTALLNFYAKCGDAKSARMVFDSMGDKNIITWSAMIGGYGVQGDGSGSLAIFSDMLKEDLKPNEIIFTTVLSACSYSGMVEEGWRYFKSMSEDYNFAPSMKHYACMVDLLARSGRLDEALDFIKKMPIQPNISLYGAFLHGCGLYSRFDLGEMAVKEMLQLHPNEACYYVLLSNLYASDGRWGQVNEIRQLMLQRGLNKVPGCSSIEKTGGQRKTITPSVVSD

Homology

[Close]

BLAST of Sed0027922 vs. NCBI nr
Match: XP_022997487.1 (pentatricopeptide repeat-containing protein At2g03380, mitochondrial [Cucurbita maxima] >XP_022997497.1 pentatricopeptide repeat-containing protein At2g03380, mitochondrial [Cucurbita maxima] >XP_022997504.1 pentatricopeptide repeat-containing protein At2g03380, mitochondrial [Cucurbita maxima] >XP_022997514.1 pentatricopeptide repeat-containing protein At2g03380, mitochondrial [Cucurbita maxima] >XP_022997519.1 pentatricopeptide repeat-containing protein At2g03380, mitochondrial [Cucurbita maxima] >XP_022997526.1 pentatricopeptide repeat-containing protein At2g03380, mitochondrial [Cucurbita maxima] >XP_022997533.1 pentatricopeptide repeat-containing protein At2g03380, mitochondrial [Cucurbita maxima])

HSP 1 Score: 1234.2 bits (3192), Expect = 0.0e+00
Identity = 600/700 (85.71%), Postives = 650/700 (92.86%), Query Frame = 0


Query: 1   MLQRFTSHPRTFLRLAGPLLEMGHHKSCSTCAPQLQVSELDQTMGSVHFISLNSCFHLLG 60
           MLQRF S PR F RLAGPLLEMGHH S ST A Q  +S+LDQTM SV FISL+SCF+ +G
Sbjct: 1   MLQRFFSLPRIFSRLAGPLLEMGHHISYSTYASQPPLSDLDQTMASVQFISLHSCFYFMG 60

Query: 61  LCKHIDTLIKFHGLLIVHGLVGNLLCDTKLVGVYGALGDVGSARKVFDQMPDPDFYAWKV 120
           LC++IDTLIKFHGLLIVHGLVGNLLCDTKLVGVYGALGDVGSAR VFDQM DPDFYAWKV
Sbjct: 61  LCRNIDTLIKFHGLLIVHGLVGNLLCDTKLVGVYGALGDVGSARMVFDQMRDPDFYAWKV 120

Query: 121 MVRWYFLNDMFVGVIPFYNRMRLSFRDCDNIIFSIILKACSELREIVEGRKVHCQIVKVG 180
           M+RWYFLNDMF  +IPFYNRMR+SFR+CDNIIFSIILKAC ELREI EGRKVHCQIVKVG
Sbjct: 121 MIRWYFLNDMFANIIPFYNRMRMSFRECDNIIFSIILKACCELREIDEGRKVHCQIVKVG 180

Query: 181 GPDGFVLTGLIDMYAKCGQISCSSVVFEGIVDKDVVSWTSMISGYVQNDCAEEGLILFNR 240
           GPD FVLTGLIDMY KCGQI CSS VFEGI+DK+VVSWT+MI+GYVQNDCAEEGL+LFNR
Sbjct: 181 GPDSFVLTGLIDMYGKCGQIECSSAVFEGIIDKNVVSWTTMIAGYVQNDCAEEGLVLFNR 240

Query: 241 MREALVVSNQFTFGSIISACTKLRALHQGKWVHGYAIKNVVQLSTFVATAFLDMYVKCGQ 300
           MRE+LV SNQFT GSII+ACT+LRALHQGKWVHGYAIKNV++LS+F+ATAFLDMYVKCGQ
Sbjct: 241 MRESLVESNQFTLGSIITACTRLRALHQGKWVHGYAIKNVIELSSFLATAFLDMYVKCGQ 300

Query: 301 TREARMIFDGLPIIDLVSWTAMIVGYTQAGQPTEALRLFTDEIRYDLLPNSVTAASVLSS 360
           TR+ARMIFD LP IDLVSWTAMIVGYTQAGQP EAL LFTD+IR  LLPNSVTAAS+LS+
Sbjct: 301 TRDARMIFDELPTIDLVSWTAMIVGYTQAGQPNEALSLFTDKIRSGLLPNSVTAASILSA 360

Query: 361 CSVSGNLSLGMSVHGLAIKLWLEECAVKNALIDMYAKCNLIDDARVIFHGVFEKDVITWN 420
           CSVSGNLS+GMSVHGL IKL L ECAVKNALIDMYAKC++IDDA V+F GV EKDVITWN
Sbjct: 361 CSVSGNLSIGMSVHGLGIKLGLAECAVKNALIDMYAKCHMIDDAYVVFLGVLEKDVITWN 420

Query: 421 SMISGYAQNGSAYEALWLFNQMRTESSAPDAITLVSTLSASAILGAVQVGSSLHAYSIKE 480
           SMISGY QNGSAY+AL LFNQMR++S APDAITLVSTLSASAILGAVQ+GSSLHAYSIKE
Sbjct: 421 SMISGYTQNGSAYDALRLFNQMRSDSLAPDAITLVSTLSASAILGAVQLGSSLHAYSIKE 480

Query: 481 GLFSSNLYIGTALLNFYAKCGDAKSARMVFDSMGDKNIITWSAMIGGYGVQGDGSGSLAI 540
           GLFSSNLYIGTALLN YAKCGDAKSARMVFDSMGDKNIITWSAMIGGYGVQGDGSGSLAI
Sbjct: 481 GLFSSNLYIGTALLNLYAKCGDAKSARMVFDSMGDKNIITWSAMIGGYGVQGDGSGSLAI 540

Query: 541 FSDMLKEDLKPNEIIFTTVLSACSYSGMVEEGWRYFKSMSEDYNFAPSMKHYACMVDLLA 600
           FSDMLKEDLKPN++IFTTVLSACSYSGMVEEGW+YFKSMS+DYN+APSMKHYACMVDLL+
Sbjct: 541 FSDMLKEDLKPNDVIFTTVLSACSYSGMVEEGWKYFKSMSQDYNYAPSMKHYACMVDLLS 600

Query: 601 RSGRLDEALDFIKKMPIQPNISLYGAFLHGCGLYSRFDLGEMAVKEMLQLHPNEACYYVL 660
           RSGRL+EALDFIKKMP+QP+ISLYGAFLHGCGLYSRFDLGE+ V+EML+LHPNEAC YVL
Sbjct: 601 RSGRLEEALDFIKKMPVQPDISLYGAFLHGCGLYSRFDLGEVIVREMLELHPNEACLYVL 660

Query: 661 LSNLYASDGRWGQVNEIRQLMLQRGLNKVPGCSSIEKTGG 701
           LSNLYASDGRWGQVNE+R LML+RGL KVPG S +E   G
Sbjct: 661 LSNLYASDGRWGQVNEVRDLMLRRGLKKVPGYSLVETNAG 700

[Close]

BLAST of Sed0027922 vs. NCBI nr
Match: KAG7032406.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1227.2 bits (3174), Expect = 0.0e+00
Identity = 597/701 (85.16%), Postives = 653/701 (93.15%), Query Frame = 0


Query: 1   MLQRFTSHPRTFLRLAGPLLEMGHHKSCSTCAPQLQVSELDQTMGSVHFISLNSCFHLLG 60
           MLQRF S PR F RLAGPLLEMGHH S ST A Q  +S+LDQTM SV FISL+SCF+ +G
Sbjct: 1   MLQRFFSLPRIFSRLAGPLLEMGHHISYSTYASQPPLSDLDQTMASVQFISLHSCFYFMG 60

Query: 61  LCKHIDTLIKFHGLLIVHGLVGNLLCDTKLVGVYGALGDVGSARKVFDQMPDPDFYAWKV 120
           LC++IDTLIKFHGLLIVHGLVGNLLCDTKLVGVYGALGDVGSAR VFDQM DPDFYAWKV
Sbjct: 61  LCRNIDTLIKFHGLLIVHGLVGNLLCDTKLVGVYGALGDVGSARMVFDQMRDPDFYAWKV 120

Query: 121 MVRWYFLNDMFVGVIPFYNRMRLSFRDCDNIIFSIILKACSELREIVEGRKVHCQIVKVG 180
           M+RWYFLNDMF  +IPFYNRMR+SF++CDNIIFSIILKACSELREI EGRKVHCQIVKVG
Sbjct: 121 MIRWYFLNDMFANIIPFYNRMRMSFKECDNIIFSIILKACSELREIDEGRKVHCQIVKVG 180

Query: 181 GPDGFVLTGLIDMYAKCGQISCSSVVFEGIVDKDVVSWTSMISGYVQNDCAEEGLILFNR 240
           GPD FVLTGLIDMY KCGQI CSS VFEGI+DK+VVSWT+MI+GYVQNDCAEEGL+LFNR
Sbjct: 181 GPDSFVLTGLIDMYGKCGQIECSSAVFEGIIDKNVVSWTTMIAGYVQNDCAEEGLVLFNR 240

Query: 241 MREALVVSNQFTFGSIISACTKLRALHQGKWVHGYAIKNV-VQLSTFVATAFLDMYVKCG 300
           MRE+LV SNQFT GSII+ACT+LRALHQGKWVHGYAIKNV ++L++F+ATAFLDMYVKCG
Sbjct: 241 MRESLVESNQFTLGSIITACTRLRALHQGKWVHGYAIKNVIIELNSFLATAFLDMYVKCG 300

Query: 301 QTREARMIFDGLPIIDLVSWTAMIVGYTQAGQPTEALRLFTDEIRYDLLPNSVTAASVLS 360
           QTR+ARMIFD LP IDLVSWTAMIVGY+QAGQP +ALRLFTD+IR  LLPNSVTAAS+LS
Sbjct: 301 QTRDARMIFDELPSIDLVSWTAMIVGYSQAGQPNDALRLFTDKIRSGLLPNSVTAASILS 360

Query: 361 SCSVSGNLSLGMSVHGLAIKLWLEECAVKNALIDMYAKCNLIDDARVIFHGVFEKDVITW 420
           +CSVSGNLS+GM VHGL IKL LEECAVKNALIDMYAKC++IDDA V+F GV EKDVITW
Sbjct: 361 ACSVSGNLSIGMLVHGLGIKLGLEECAVKNALIDMYAKCHMIDDAYVVFLGVLEKDVITW 420

Query: 421 NSMISGYAQNGSAYEALWLFNQMRTESSAPDAITLVSTLSASAILGAVQVGSSLHAYSIK 480
           NSMISGYAQ+GSAY+AL LFNQM+++S APDAITLVS LSASAILGAVQVGSSLHAYSIK
Sbjct: 421 NSMISGYAQSGSAYDALRLFNQMKSDSLAPDAITLVSALSASAILGAVQVGSSLHAYSIK 480

Query: 481 EGLFSSNLYIGTALLNFYAKCGDAKSARMVFDSMGDKNIITWSAMIGGYGVQGDGSGSLA 540
           EGLFSSNLYIGTALLN YAKCGDAKSARMVFDSMGDKNIITWSAMIGGYGVQGDGSGSLA
Sbjct: 481 EGLFSSNLYIGTALLNLYAKCGDAKSARMVFDSMGDKNIITWSAMIGGYGVQGDGSGSLA 540

Query: 541 IFSDMLKEDLKPNEIIFTTVLSACSYSGMVEEGWRYFKSMSEDYNFAPSMKHYACMVDLL 600
           IFSDMLKEDLKPN++IFTTVLSACSYSGMVEEGWRYFKSMS+DYN+APSMKHYACMVDLL
Sbjct: 541 IFSDMLKEDLKPNDVIFTTVLSACSYSGMVEEGWRYFKSMSQDYNYAPSMKHYACMVDLL 600

Query: 601 ARSGRLDEALDFIKKMPIQPNISLYGAFLHGCGLYSRFDLGEMAVKEMLQLHPNEACYYV 660
           +RSGRL+EAL+FIKKMP+QP+ISLYGAFLHGCGLYSRFDLGE+ V+EML+LHPNEAC+YV
Sbjct: 601 SRSGRLEEALEFIKKMPVQPDISLYGAFLHGCGLYSRFDLGEVIVREMLELHPNEACFYV 660

Query: 661 LLSNLYASDGRWGQVNEIRQLMLQRGLNKVPGCSSIEKTGG 701
           LLSNLYASDGRWGQVNE+R LML+RGL KVPG S +E   G
Sbjct: 661 LLSNLYASDGRWGQVNEVRDLMLRRGLKKVPGYSLVETNAG 701

[Close]

BLAST of Sed0027922 vs. NCBI nr
Match: XP_038893238.1 (pentatricopeptide repeat-containing protein At2g03380, mitochondrial [Benincasa hispida])

HSP 1 Score: 1226.5 bits (3172), Expect = 0.0e+00
Identity = 600/700 (85.71%), Postives = 643/700 (91.86%), Query Frame = 0


Query: 1   MLQRFTSHPRTFLRLAGPLLEMGHHKSCSTCAPQLQVSELDQTMGSVHFISLNSCFHLLG 60
           MLQRF + PR F RLAGPLL+MGHH S    A    +S+L QTM S   ISL+SCF+L+G
Sbjct: 1   MLQRFFNLPRAFSRLAGPLLQMGHHMSYCAYASHPPLSDLHQTMASAQSISLHSCFYLIG 60

Query: 61  LCKHIDTLIKFHGLLIVHGLVGNLLCDTKLVGVYGALGDVGSARKVFDQMPDPDFYAWKV 120
           LCK+IDTLIKFHGLLIVHGLVGNLLCDTKLVGVYGALGDVGSAR VFDQMPDPDFYAWKV
Sbjct: 61  LCKNIDTLIKFHGLLIVHGLVGNLLCDTKLVGVYGALGDVGSARMVFDQMPDPDFYAWKV 120

Query: 121 MVRWYFLNDMFVGVIPFYNRMRLSFRDCDNIIFSIILKACSELREIVEGRKVHCQIVKVG 180
           M+RWYFLND+FV +IPFYNRMR+SFR+CD IIFSIILKACSELREI EGRKVHCQIVKVG
Sbjct: 121 MIRWYFLNDLFVDIIPFYNRMRMSFRECDKIIFSIILKACSELREIDEGRKVHCQIVKVG 180

Query: 181 GPDGFVLTGLIDMYAKCGQISCSSVVFEGIVDKDVVSWTSMISGYVQNDCAEEGLILFNR 240
           GPD FVLTGLIDMY KCGQI  SSVVFE IVDK+VVSWTSMI+GYVQN+CAEEGL+LFNR
Sbjct: 181 GPDSFVLTGLIDMYGKCGQIESSSVVFEEIVDKNVVSWTSMIAGYVQNNCAEEGLVLFNR 240

Query: 241 MREALVVSNQFTFGSIISACTKLRALHQGKWVHGYAIKNVVQLSTFVATAFLDMYVKCGQ 300
           MREALV SN FT GSII+ACTKLRALHQGKWVHGYAIKN+++LS+F+ATAFLDMYVKCGQ
Sbjct: 241 MREALVESNPFTLGSIITACTKLRALHQGKWVHGYAIKNMMELSSFLATAFLDMYVKCGQ 300

Query: 301 TREARMIFDGLPIIDLVSWTAMIVGYTQAGQPTEALRLFTDEIRYDLLPNSVTAASVLSS 360
           T++ARMIFD LP IDLVSWTAM+VGYTQ GQP EALRLF DEIR  LLPNSVTAASVLSS
Sbjct: 301 TKDARMIFDELPTIDLVSWTAMVVGYTQVGQPNEALRLFADEIRSGLLPNSVTAASVLSS 360

Query: 361 CSVSGNLSLGMSVHGLAIKLWLEECAVKNALIDMYAKCNLIDDARVIFHGVFEKDVITWN 420
           CSVSGNLSLGMSVHGL IKL LEECAVKNALIDMY+KC++IDDA VIF GV EKDVITWN
Sbjct: 361 CSVSGNLSLGMSVHGLGIKLGLEECAVKNALIDMYSKCHMIDDAYVIFRGVLEKDVITWN 420

Query: 421 SMISGYAQNGSAYEALWLFNQMRTESSAPDAITLVSTLSASAILGAVQVGSSLHAYSIKE 480
           SMISGYAQNGSAYE+L LFN MR++  APDAITLVSTLSASA +GAVQVGSSLHAYSIKE
Sbjct: 421 SMISGYAQNGSAYESLRLFNLMRSDYLAPDAITLVSTLSASATIGAVQVGSSLHAYSIKE 480

Query: 481 GLFSSNLYIGTALLNFYAKCGDAKSARMVFDSMGDKNIITWSAMIGGYGVQGDGSGSLAI 540
           GLFSSNLYIGTALLNFYAKCGDAKSARMVFD MGDKNIITWSAMIGGYGVQGDGSGSL++
Sbjct: 481 GLFSSNLYIGTALLNFYAKCGDAKSARMVFDGMGDKNIITWSAMIGGYGVQGDGSGSLSV 540

Query: 541 FSDMLKEDLKPNEIIFTTVLSACSYSGMVEEGWRYFKSMSEDYNFAPSMKHYACMVDLLA 600
           FSDMLKEDLKPNE+IFTTVLSACSYSGMVEEGWRYFKSM +DYNF PSMKHYACMVDLLA
Sbjct: 541 FSDMLKEDLKPNEVIFTTVLSACSYSGMVEEGWRYFKSMIQDYNFVPSMKHYACMVDLLA 600

Query: 601 RSGRLDEALDFIKKMPIQPNISLYGAFLHGCGLYSRFDLGEMAVKEMLQLHPNEACYYVL 660
           RSGRLDEALDFIKKMP+QP+ISLYGAFLHGCGLYSRFDLGE+ V+EMLQLHPNEACYYVL
Sbjct: 601 RSGRLDEALDFIKKMPVQPDISLYGAFLHGCGLYSRFDLGEVVVREMLQLHPNEACYYVL 660

Query: 661 LSNLYASDGRWGQVNEIRQLMLQRGLNKVPGCSSIEKTGG 701
           LSNLYASDGRWGQVNE+R LMLQRGLNKVPG S +E   G
Sbjct: 661 LSNLYASDGRWGQVNEVRDLMLQRGLNKVPGYSIVESNEG 700

[Close]

BLAST of Sed0027922 vs. NCBI nr
Match: XP_022957571.1 (pentatricopeptide repeat-containing protein At2g03380, mitochondrial [Cucurbita moschata] >XP_022957572.1 pentatricopeptide repeat-containing protein At2g03380, mitochondrial [Cucurbita moschata] >XP_022957573.1 pentatricopeptide repeat-containing protein At2g03380, mitochondrial [Cucurbita moschata] >XP_022957574.1 pentatricopeptide repeat-containing protein At2g03380, mitochondrial [Cucurbita moschata] >XP_022957575.1 pentatricopeptide repeat-containing protein At2g03380, mitochondrial [Cucurbita moschata] >XP_022957577.1 pentatricopeptide repeat-containing protein At2g03380, mitochondrial [Cucurbita moschata] >XP_022957578.1 pentatricopeptide repeat-containing protein At2g03380, mitochondrial [Cucurbita moschata])

HSP 1 Score: 1224.2 bits (3166), Expect = 0.0e+00
Identity = 598/701 (85.31%), Postives = 650/701 (92.72%), Query Frame = 0


Query: 1   MLQRFTSHPRTFLRLAGPLLEMGHHKSCSTCAPQLQVSELDQTMGSVHFISLNSCFHLLG 60
           MLQRF S PR F RLAGPLLEMGHH S ST A Q  +S+LDQTM SV FISL+SCF+ +G
Sbjct: 1   MLQRFFSLPRIFSRLAGPLLEMGHHISYSTYASQPPLSDLDQTMASVQFISLHSCFYFMG 60

Query: 61  LCKHIDTLIKFHGLLIVHGLVGNLLCDTKLVGVYGALGDVGSARKVFDQMPDPDFYAWKV 120
           LC++IDTLIKFHGLLIVHGLVGNLLCDTKLVGVYGALGDVGSAR VFDQM DPDFYAWKV
Sbjct: 61  LCRNIDTLIKFHGLLIVHGLVGNLLCDTKLVGVYGALGDVGSARMVFDQMRDPDFYAWKV 120

Query: 121 MVRWYFLNDMFVGVIPFYNRMRLSFRDCDNIIFSIILKACSELREIVEGRKVHCQIVKVG 180
           M+RWYFLNDMF  +IPFYNRMR+SF++CDNIIFSIILKACSELREI EGRKVHCQIVKVG
Sbjct: 121 MIRWYFLNDMFANIIPFYNRMRMSFKECDNIIFSIILKACSELREIDEGRKVHCQIVKVG 180

Query: 181 GPDGFVLTGLIDMYAKCGQISCSSVVFEGIVDKDVVSWTSMISGYVQNDCAEEGLILFNR 240
           GPD FVLTGLIDMY KCGQI CSS VFEGI+DK+VVSWT+MI+GYVQNDCAEEGL+LFNR
Sbjct: 181 GPDSFVLTGLIDMYGKCGQIECSSAVFEGIIDKNVVSWTTMIAGYVQNDCAEEGLVLFNR 240

Query: 241 MREALVVSNQFTFGSIISACTKLRALHQGKWVHGYAIKNVV-QLSTFVATAFLDMYVKCG 300
           MRE+LV SNQFT GSII+ACT+LRALHQGKWVHGYAIKNV+ +L++F+ATAFLDMYVKCG
Sbjct: 241 MRESLVESNQFTLGSIITACTRLRALHQGKWVHGYAIKNVIFELNSFLATAFLDMYVKCG 300

Query: 301 QTREARMIFDGLPIIDLVSWTAMIVGYTQAGQPTEALRLFTDEIRYDLLPNSVTAASVLS 360
           QTR+ARMIFD LP IDLVSWTAMIVGY+QAGQP EALRLFTD+IR  LLPNSVTAAS+LS
Sbjct: 301 QTRDARMIFDELPSIDLVSWTAMIVGYSQAGQPNEALRLFTDKIRSGLLPNSVTAASILS 360

Query: 361 SCSVSGNLSLGMSVHGLAIKLWLEECAVKNALIDMYAKCNLIDDARVIFHGVFEKDVITW 420
           +CSVSGNLS+GM VHGL IKL LEECAVKNALIDMYAKC++IDDA V+F GV EKDVITW
Sbjct: 361 ACSVSGNLSIGMLVHGLGIKLGLEECAVKNALIDMYAKCHMIDDAYVVFLGVLEKDVITW 420

Query: 421 NSMISGYAQNGSAYEALWLFNQMRTESSAPDAITLVSTLSASAILGAVQVGSSLHAYSIK 480
           NSMISGYAQ+GSAY+AL LFNQMR++S APDAITLVS LSASAILGAVQVGSSLH YSIK
Sbjct: 421 NSMISGYAQSGSAYDALRLFNQMRSDSLAPDAITLVSALSASAILGAVQVGSSLHVYSIK 480

Query: 481 EGLFSSNLYIGTALLNFYAKCGDAKSARMVFDSMGDKNIITWSAMIGGYGVQGDGSGSLA 540
           EGLFSSNLYIGTALLN YAKCGDAKSARMVFDSMGDKNIITWSAMIGGYGVQGDGSGSLA
Sbjct: 481 EGLFSSNLYIGTALLNLYAKCGDAKSARMVFDSMGDKNIITWSAMIGGYGVQGDGSGSLA 540

Query: 541 IFSDMLKEDLKPNEIIFTTVLSACSYSGMVEEGWRYFKSMSEDYNFAPSMKHYACMVDLL 600
           IFSDMLKEDLKPN++IFTTVLSACSYSGMVEEGWRYFKSMS+DYN+APSMKHYACMVDLL
Sbjct: 541 IFSDMLKEDLKPNDVIFTTVLSACSYSGMVEEGWRYFKSMSQDYNYAPSMKHYACMVDLL 600

Query: 601 ARSGRLDEALDFIKKMPIQPNISLYGAFLHGCGLYSRFDLGEMAVKEMLQLHPNEACYYV 660
           +RSGRL+EALDFIKKMP+QP+ISLYGAFLHGCGLYSRFDLGE+ V+EML+LHPNEA  YV
Sbjct: 601 SRSGRLEEALDFIKKMPVQPDISLYGAFLHGCGLYSRFDLGEVIVREMLELHPNEASLYV 660

Query: 661 LLSNLYASDGRWGQVNEIRQLMLQRGLNKVPGCSSIEKTGG 701
           LLSNLYASDGRWGQVNE+R LML+RGL KVPG S +E   G
Sbjct: 661 LLSNLYASDGRWGQVNEVRDLMLRRGLKKVPGYSLVETNAG 701

[Close]

BLAST of Sed0027922 vs. NCBI nr
Match: KAG6601646.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1223.4 bits (3164), Expect = 0.0e+00
Identity = 595/701 (84.88%), Postives = 651/701 (92.87%), Query Frame = 0


Query: 1   MLQRFTSHPRTFLRLAGPLLEMGHHKSCSTCAPQLQVSELDQTMGSVHFISLNSCFHLLG 60
           MLQRF S PR F RLAGPLLEMGHH   ST A Q  +S+LDQTM SV FISL+SCF+ +G
Sbjct: 1   MLQRFFSLPRIFSRLAGPLLEMGHHIFYSTYASQPPLSDLDQTMASVQFISLHSCFYFMG 60

Query: 61  LCKHIDTLIKFHGLLIVHGLVGNLLCDTKLVGVYGALGDVGSARKVFDQMPDPDFYAWKV 120
           LC++IDTLIKFHGLLIVHGLVGNLLCDTKLVGVYGALGDVGSAR VFDQM DPDFYAWKV
Sbjct: 61  LCRNIDTLIKFHGLLIVHGLVGNLLCDTKLVGVYGALGDVGSARMVFDQMRDPDFYAWKV 120

Query: 121 MVRWYFLNDMFVGVIPFYNRMRLSFRDCDNIIFSIILKACSELREIVEGRKVHCQIVKVG 180
           M+RWYFLNDMF  +IPFYNRMR+SF++CDNIIFSIILKACSELREI EGRKVHCQIVKVG
Sbjct: 121 MIRWYFLNDMFANIIPFYNRMRMSFKECDNIIFSIILKACSELREIDEGRKVHCQIVKVG 180

Query: 181 GPDGFVLTGLIDMYAKCGQISCSSVVFEGIVDKDVVSWTSMISGYVQNDCAEEGLILFNR 240
           GPD FVLTGLIDMY KCGQI CSS VFEGI+DK+VVSWT+MI+GYVQNDCAEEGL+LFNR
Sbjct: 181 GPDSFVLTGLIDMYGKCGQIECSSAVFEGIIDKNVVSWTTMIAGYVQNDCAEEGLVLFNR 240

Query: 241 MREALVVSNQFTFGSIISACTKLRALHQGKWVHGYAIKNV-VQLSTFVATAFLDMYVKCG 300
           MRE+LV SNQFT GSII+ACT+LRALHQGKWVHGYAIKNV ++L++F+ATAFLDMYVKCG
Sbjct: 241 MRESLVESNQFTLGSIITACTRLRALHQGKWVHGYAIKNVIIELNSFLATAFLDMYVKCG 300

Query: 301 QTREARMIFDGLPIIDLVSWTAMIVGYTQAGQPTEALRLFTDEIRYDLLPNSVTAASVLS 360
           QTR+ARMIFD LP IDLVSWTAMIVGY+QAGQP +ALRLFTD+IR  LLPNSVTAAS+LS
Sbjct: 301 QTRDARMIFDELPSIDLVSWTAMIVGYSQAGQPNDALRLFTDKIRSGLLPNSVTAASILS 360

Query: 361 SCSVSGNLSLGMSVHGLAIKLWLEECAVKNALIDMYAKCNLIDDARVIFHGVFEKDVITW 420
           +CSVSGNLS+GM VHGL IKL LEECAVKNALIDMYAKC++IDDA V+F GV EKDVITW
Sbjct: 361 ACSVSGNLSIGMLVHGLGIKLGLEECAVKNALIDMYAKCHMIDDAYVVFLGVLEKDVITW 420

Query: 421 NSMISGYAQNGSAYEALWLFNQMRTESSAPDAITLVSTLSASAILGAVQVGSSLHAYSIK 480
           NSMISGYAQ+GSAY+AL LFNQM+++S APDAITLVS LSASAILGAVQVGSSLHAYSIK
Sbjct: 421 NSMISGYAQSGSAYDALRLFNQMKSDSLAPDAITLVSALSASAILGAVQVGSSLHAYSIK 480

Query: 481 EGLFSSNLYIGTALLNFYAKCGDAKSARMVFDSMGDKNIITWSAMIGGYGVQGDGSGSLA 540
           EGLFSSNLYIGTALLN YAKCGDAKSARMVFDSMGDKNIITWSAMIGGYGVQGDGSGSLA
Sbjct: 481 EGLFSSNLYIGTALLNLYAKCGDAKSARMVFDSMGDKNIITWSAMIGGYGVQGDGSGSLA 540

Query: 541 IFSDMLKEDLKPNEIIFTTVLSACSYSGMVEEGWRYFKSMSEDYNFAPSMKHYACMVDLL 600
           IFSDMLKEDLKPN++IFTTVLSACSYSGMVEEGWRYFKSMS+DYN+ PSMKHYACMVDLL
Sbjct: 541 IFSDMLKEDLKPNDVIFTTVLSACSYSGMVEEGWRYFKSMSQDYNYVPSMKHYACMVDLL 600

Query: 601 ARSGRLDEALDFIKKMPIQPNISLYGAFLHGCGLYSRFDLGEMAVKEMLQLHPNEACYYV 660
           +RSGRL+EAL+FIKKMP+QP+ISLYGAFLHGCGLYSRFDLGE+ V+EML+LHPNEAC+YV
Sbjct: 601 SRSGRLEEALEFIKKMPVQPDISLYGAFLHGCGLYSRFDLGEVIVREMLELHPNEACFYV 660

Query: 661 LLSNLYASDGRWGQVNEIRQLMLQRGLNKVPGCSSIEKTGG 701
           LLSNLYASDGRWGQVNE+R LML+RGL KVPG S +E   G
Sbjct: 661 LLSNLYASDGRWGQVNEVRDLMLRRGLKKVPGYSLVETNAG 701

[Close]

BLAST of Sed0027922 vs. ExPASy Swiss-Prot
Match: Q9ZQ74 (Pentatricopeptide repeat-containing protein At2g03380, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E47 PE=3 SV=1)

HSP 1 Score: 759.6 bits (1960), Expect = 3.2e-218
Identity = 370/653 (56.66%), Postives = 489/653 (74.89%), Query Frame = 0


Query: 46  SVHFISLNSCFHLLGLCKHIDTLIKFHGLLIVHGLVGNLLCDTKLVGVYGALGDVGSARK 105
           S+H+ + + CF LL  C +ID+L + HG+L  +GL+G++   TKLV +YG  G    AR 
Sbjct: 38  SLHYAASSPCFLLLSKCTNIDSLRQSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARL 97

Query: 106 VFDQMPDPDFYAWKVMVRWYFLNDMFVGVIPFYN-RMRLSFRDCDNIIFSIILKACSELR 165
           VFDQ+P+PDFY WKVM+R Y LN   V V+  Y+  M+  FR  D+I+FS  LKAC+EL+
Sbjct: 98  VFDQIPEPDFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFR-YDDIVFSKALKACTELQ 157

Query: 166 EIVEGRKVHCQIVKVGGPDGFVLTGLIDMYAKCGQISCSSVVFEGIVDKDVVSWTSMISG 225
           ++  G+K+HCQ+VKV   D  VLTGL+DMYAKCG+I  +  VF  I  ++VV WTSMI+G
Sbjct: 158 DLDNGKKIHCQLVKVPSFDNVVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAG 217

Query: 226 YVQNDCAEEGLILFNRMREALVVSNQFTFGSIISACTKLRALHQGKWVHGYAIKNVVQLS 285
           YV+ND  EEGL+LFNRMRE  V+ N++T+G++I ACTKL ALHQGKW HG  +K+ ++LS
Sbjct: 218 YVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELS 277

Query: 286 TFVATAFLDMYVKCGQTREARMIFDGLPIIDLVSWTAMIVGYTQAGQPTEALRLFTDEIR 345
           + + T+ LDMYVKCG    AR +F+    +DLV WTAMIVGYT  G   EAL LF     
Sbjct: 278 SCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKG 337

Query: 346 YDLLPNSVTAASVLSSCSVSGNLSLGMSVHGLAIKLWLEECAVKNALIDMYAKCNLIDDA 405
            ++ PN VT ASVLS C +  NL LG SVHGL+IK+ + +  V NAL+ MYAKC    DA
Sbjct: 338 VEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIWDTNVANALVHMYAKCYQNRDA 397

Query: 406 RVIFHGVFEKDVITWNSMISGYAQNGSAYEALWLFNQMRTESSAPDAITLVSTLSASAIL 465
           + +F    EKD++ WNS+ISG++QNGS +EAL+LF++M +ES  P+ +T+ S  SA A L
Sbjct: 398 KYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASL 457

Query: 466 GAVQVGSSLHAYSIKEG-LFSSNLYIGTALLNFYAKCGDAKSARMVFDSMGDKNIITWSA 525
           G++ VGSSLHAYS+K G L SS++++GTALL+FYAKCGD +SAR++FD++ +KN ITWSA
Sbjct: 458 GSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSA 517

Query: 526 MIGGYGVQGDGSGSLAIFSDMLKEDLKPNEIIFTTVLSACSYSGMVEEGWRYFKSMSEDY 585
           MIGGYG QGD  GSL +F +MLK+  KPNE  FT++LSAC ++GMV EG +YF SM +DY
Sbjct: 518 MIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDY 577

Query: 586 NFAPSMKHYACMVDLLARSGRLDEALDFIKKMPIQPNISLYGAFLHGCGLYSRFDLGEMA 645
           NF PS KHY CMVD+LAR+G L++ALD I+KMPIQP++  +GAFLHGCG++SRFDLGE+ 
Sbjct: 578 NFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIV 637

Query: 646 VKEMLQLHPNEACYYVLLSNLYASDGRWGQVNEIRQLMLQRGLNKVPGCSSIE 697
           +K+ML LHP++A YYVL+SNLYASDGRW Q  E+R LM QRGL+K+ G S++E
Sbjct: 638 IKKMLDLHPDDASYYVLVSNLYASDGRWNQAKEVRNLMKQRGLSKIAGHSTME 689

[Close]

BLAST of Sed0027922 vs. ExPASy Swiss-Prot
Match: Q3E6Q1 (Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H40 PE=2 SV=1)

HSP 1 Score: 448.0 bits (1151), Expect = 2.0e-124
Identity = 234/643 (36.39%), Postives = 378/643 (58.79%), Query Frame = 0


Query: 58  LLGLCKHIDTLIKFHGLLIVHGLVGNLLCDTKLVGVYGALGDVGSARKVFDQMPDPDFYA 117
           LL  C  +  L +   L+  +GL       TKLV ++   G V  A +VF+ +       
Sbjct: 43  LLERCSSLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVL 102

Query: 118 WKVMVRWYFLNDMFVGVIPFYNRMRLSFRDCDNII--FSIILKACSELREIVEGRKVHCQ 177
           +  M++ +         + F+ RMR  + D + ++  F+ +LK C +  E+  G+++H  
Sbjct: 103 YHTMLKGFAKVSDLDKALQFFVRMR--YDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGL 162

Query: 178 IVKVG-GPDGFVLTGLIDMYAKCGQISCSSVVFEGIVDKDVVSWTSMISGYVQNDCAEEG 237
           +VK G   D F +TGL +MYAKC Q++ +  VF+ + ++D+VSW ++++GY QN  A   
Sbjct: 163 LVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMA 222

Query: 238 LILFNRMREALVVSNQFTFGSIISACTKLRALHQGKWVHGYAIKNVVQLSTFVATAFLDM 297
           L +   M E  +  +  T  S++ A + LR +  GK +HGYA+++       ++TA +DM
Sbjct: 223 LEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDM 282

Query: 298 YVKCGQTREARMIFDGLPIIDLVSWTAMIVGYTQAGQPTEALRLFTDEIRYDLLPNSVTA 357
           Y KCG    AR +FDG+   ++VSW +MI  Y Q   P EA+ +F   +   + P  V+ 
Sbjct: 283 YAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSV 342

Query: 358 ASVLSSCSVSGNLSLGMSVHGLAIKLWLE-ECAVKNALIDMYAKCNLIDDARVIFHGVFE 417
              L +C+  G+L  G  +H L+++L L+   +V N+LI MY KC  +D A  +F  +  
Sbjct: 343 MGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQS 402

Query: 418 KDVITWNSMISGYAQNGSAYEALWLFNQMRTESSAPDAITLVSTLSASAILGAVQVGSSL 477
           + +++WN+MI G+AQNG   +AL  F+QMR+ +  PD  T VS ++A A L        +
Sbjct: 403 RTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWI 462

Query: 478 HAYSIKEGLFSSNLYIGTALLNFYAKCGDAKSARMVFDSMGDKNIITWSAMIGGYGVQGD 537
           H   ++  L   N+++ TAL++ YAKCG    AR++FD M ++++ TW+AMI GYG  G 
Sbjct: 463 HGVVMRSCL-DKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGF 522

Query: 538 GSGSLAIFSDMLKEDLKPNEIIFTTVLSACSYSGMVEEGWRYFKSMSEDYNFAPSMKHYA 597
           G  +L +F +M K  +KPN + F +V+SACS+SG+VE G + F  M E+Y+   SM HY 
Sbjct: 523 GKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYG 582

Query: 598 CMVDLLARSGRLDEALDFIKKMPIQPNISLYGAFLHGCGLYSRFDLGEMAVKEMLQLHPN 657
            MVDLL R+GRL+EA DFI +MP++P +++YGA L  C ++   +  E A + + +L+P+
Sbjct: 583 AMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPD 642

Query: 658 EACYYVLLSNLYASDGRWGQVNEIRQLMLQRGLNKVPGCSSIE 697
           +  Y+VLL+N+Y +   W +V ++R  ML++GL K PGCS +E
Sbjct: 643 DGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVE 682

[Close]

BLAST of Sed0027922 vs. ExPASy Swiss-Prot
Match: O81767 (Pentatricopeptide repeat-containing protein At4g33990 OS=Arabidopsis thaliana OX=3702 GN=EMB2758 PE=3 SV=2)

HSP 1 Score: 432.6 bits (1111), Expect = 8.8e-120
Identity = 236/644 (36.65%), Postives = 375/644 (58.23%), Query Frame = 0


Query: 58  LLGLCKHIDTLIKFHGLLIVHGLVGNLLCDTKLVGVYGALGDVGSARKVFDQMPDPDFYA 117
           L   C ++ +    H  L+V   + N+    KLV +Y  LG+V  AR  FD + + D YA
Sbjct: 60  LFRYCTNLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYA 119

Query: 118 WKVMVRWYFLNDMFVGVIPFYNRMRLSF-RDCDNIIFSIILKACSELREIVEGRKVHCQI 177
           W +M+  Y        VI  ++   LS     D   F  +LKAC   R +++G K+HC  
Sbjct: 120 WNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKAC---RTVIDGNKIHCLA 179

Query: 178 VKVGGP-DGFVLTGLIDMYAKCGQISCSSVVFEGIVDKDVVSWTSMISGYVQNDCAEEGL 237
           +K G   D +V   LI +Y++   +  + ++F+ +  +D+ SW +MISGY Q+  A+E L
Sbjct: 180 LKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEAL 239

Query: 238 ILFNRMREALVVSNQFTFGSIISACTKLRALHQGKWVHGYAIKNVVQLSTFVATAFLDMY 297
            L N +R      +  T  S++SACT+    ++G  +H Y+IK+ ++   FV+   +D+Y
Sbjct: 240 TLSNGLR----AMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLY 299

Query: 298 VKCGQTREARMIFDGLPIIDLVSWTAMIVGYTQAGQPTEALRLFTDEIRYDLLPNSVTAA 357
            + G+ R+ + +FD + + DL+SW ++I  Y    QP  A+ LF +     + P+ +T  
Sbjct: 300 AEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLI 359

Query: 358 SVLSSCSVSGNLSLGMSVHGLAIK--LWLEECAVKNALIDMYAKCNLIDDARVIFHGVFE 417
           S+ S  S  G++    SV G  ++   +LE+  + NA++ MYAK  L+D AR +F+ +  
Sbjct: 360 SLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPN 419

Query: 418 KDVITWNSMISGYAQNGSAYEALWLFNQMRTESS-APDAITLVSTLSASAILGAVQVGSS 477
            DVI+WN++ISGYAQNG A EA+ ++N M  E   A +  T VS L A +  GA++ G  
Sbjct: 420 TDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMK 479

Query: 478 LHAYSIKEGLFSSNLYIGTALLNFYAKCGDAKSARMVFDSMGDKNIITWSAMIGGYGVQG 537
           LH   +K GL+  ++++ T+L + Y KCG  + A  +F  +   N + W+ +I  +G  G
Sbjct: 480 LHGRLLKNGLY-LDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHG 539

Query: 538 DGSGSLAIFSDMLKEDLKPNEIIFTTVLSACSYSGMVEEGWRYFKSMSEDYNFAPSMKHY 597
            G  ++ +F +ML E +KP+ I F T+LSACS+SG+V+EG   F+ M  DY   PS+KHY
Sbjct: 540 HGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHY 599

Query: 598 ACMVDLLARSGRLDEALDFIKKMPIQPNISLYGAFLHGCGLYSRFDLGEMAVKEMLQLHP 657
            CMVD+  R+G+L+ AL FIK M +QP+ S++GA L  C ++   DLG++A + + ++ P
Sbjct: 600 GCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEP 659

Query: 658 NEACYYVLLSNLYASDGRWGQVNEIRQLMLQRGLNKVPGCSSIE 697
               Y+VLLSN+YAS G+W  V+EIR +   +GL K PG SS+E
Sbjct: 660 EHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSME 695

[Close]

BLAST of Sed0027922 vs. ExPASy Swiss-Prot
Match: Q9C507 (Putative pentatricopeptide repeat-containing protein At1g69350, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E66 PE=3 SV=1)

HSP 1 Score: 416.4 bits (1069), Expect = 6.6e-115
Identity = 220/662 (33.23%), Postives = 379/662 (57.25%), Query Frame = 0


Query: 37  VSELDQTMGSVHFISLNSCFHLLGLCKHIDTLIKFHGLLIVHGLVGNLLCDTKLVGVYGA 96
           VSE  Q    V    L +C    G  +H+    K HG +I  G+  + + +T L+ +YG 
Sbjct: 92  VSETTQISKFVFPSVLRAC---AGSREHLSVGGKVHGRIIKGGVDDDAVIETSLLCMYGQ 151

Query: 97  LGDVGSARKVFDQMPDPDFYAWKVMVRWYFLNDMFVGVIPFYNRMRLSFRDCDNIIFSII 156
            G++  A KVFD MP  D  AW  +V     N   V  +  +  M     + D +    +
Sbjct: 152 TGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISV 211

Query: 157 LKACSELREIVEGRKVHCQIV-KVGGPDGFVLTGLIDMYAKCGQISCSSVVFEGIVDKDV 216
           ++ C+EL  +   R VH QI  K+   D  +   L+ MY+KCG +  S  +FE I  K+ 
Sbjct: 212 VEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNA 271

Query: 217 VSWTSMISGYVQNDCAEEGLILFNRMREALVVSNQFTFGSIISACTKLRALHQGKWVHGY 276
           VSWT+MIS Y + + +E+ L  F+ M ++ +  N  T  S++S+C  +  + +GK VHG+
Sbjct: 272 VSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGF 331

Query: 277 AIKNVVQLS-TFVATAFLDMYVKCGQTREARMIFDGLPIIDLVSWTAMIVGYTQAGQPTE 336
           A++  +  +   ++ A +++Y +CG+  +   +   +   ++V+W ++I  Y   G   +
Sbjct: 332 AVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQ 391

Query: 337 ALRLFTDEIRYDLLPNSVTAASVLSSCSVSGNLSLGMSVHGLAIKLWLEECAVKNALIDM 396
           AL LF   +   + P++ T AS +S+C  +G + LG  +HG  I+  + +  V+N+LIDM
Sbjct: 392 ALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDVSDEFVQNSLIDM 451

Query: 397 YAKCNLIDDARVIFHGVFEKDVITWNSMISGYAQNGSAYEALWLFNQMRTESSAPDAITL 456
           Y+K   +D A  +F+ +  + V+TWNSM+ G++QNG++ EA+ LF+ M       + +T 
Sbjct: 452 YSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTF 511

Query: 457 VSTLSASAILGAVQVGSSLHAYSIKEGLFSSNLYIGTALLNFYAKCGDAKSARMVFDSMG 516
           ++ + A + +G+++ G  +H   I  GL   +L+  TAL++ YAKCGD  +A  VF +M 
Sbjct: 512 LAVIQACSSIGSLEKGKWVHHKLIISGL--KDLFTDTALIDMYAKCGDLNAAETVFRAMS 571

Query: 517 DKNIITWSAMIGGYGVQGDGSGSLAIFSDMLKEDLKPNEIIFTTVLSACSYSGMVEEGWR 576
            ++I++WS+MI  YG+ G    +++ F+ M++   KPNE++F  VLSAC +SG VEEG +
Sbjct: 572 SRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEG-K 631

Query: 577 YFKSMSEDYNFAPSMKHYACMVDLLARSGRLDEALDFIKKMPIQPNISLYGAFLHGCGLY 636
           Y+ ++ + +  +P+ +H+AC +DLL+RSG L EA   IK+MP   + S++G+ ++GC ++
Sbjct: 632 YYFNLMKSFGVSPNSEHFACFIDLLSRSGDLKEAYRTIKEMPFLADASVWGSLVNGCRIH 691

Query: 637 SRFDLGEMAVKEMLQLHPNEACYYVLLSNLYASDGRWGQVNEIRQLMLQRGLNKVPGCSS 696
            + D+ +    ++  +  ++  YY LLSN+YA +G W +   +R  M    L KVPG S+
Sbjct: 692 QKMDIIKAIKNDLSDIVTDDTGYYTLLSNIYAEEGEWEEFRRLRSAMKSSNLKKVPGYSA 747

[Close]

BLAST of Sed0027922 vs. ExPASy Swiss-Prot
Match: Q9SN39 (Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DOT4 PE=2 SV=1)

HSP 1 Score: 416.4 bits (1069), Expect = 6.6e-115
Identity = 228/645 (35.35%), Postives = 362/645 (56.12%), Query Frame = 0


Query: 63  KHIDTLIKFHGLLIVHGLVGNLLCDTKLVGVYGALGDVGSARKVFDQMPDPDFYAWKVMV 122
           K +D  I+ +G +I   L       +KL  +Y   GD+  A +VFD++       W +++
Sbjct: 114 KEVDNFIRGNGFVIDSNL------GSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILM 173

Query: 123 RWYFLNDMFVGVIPFYNRMRLSFRDCDNIIFSIILKACSELREIVEGRKVHCQIVKVG-G 182
                +  F G I  + +M  S  + D+  FS + K+ S LR +  G ++H  I+K G G
Sbjct: 174 NELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFG 233

Query: 183 PDGFVLTGLIDMYAKCGQISCSSVVFEGIVDKDVVSWTSMISGYVQNDCAEEGLILFNRM 242
               V   L+  Y K  ++  +  VF+ + ++DV+SW S+I+GYV N  AE+GL +F +M
Sbjct: 234 ERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQM 293

Query: 243 REALVVSNQFTFGSIISACTKLRALHQGKWVHGYAIKNVVQLSTFVATAFLDMYVKCGQT 302
             + +  +  T  S+ + C   R +  G+ VH   +K             LDMY KCG  
Sbjct: 294 LVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDL 353

Query: 303 REARMIFDGLPIIDLVSWTAMIVGYTQAGQPTEALRLFTDEIRYDLLPNSVTAASVLSSC 362
             A+ +F  +    +VS+T+MI GY + G   EA++LF +     + P+  T  +VL+ C
Sbjct: 354 DSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCC 413

Query: 363 SVSGNLSLGMSVHGLAIKLWLEE------CAVKNALIDMYAKCNLIDDARVIFHGVFEKD 422
           +    L  G  VH      W++E        V NAL+DMYAKC  + +A ++F  +  KD
Sbjct: 414 ARYRLLDEGKRVHE-----WIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKD 473

Query: 423 VITWNSMISGYAQNGSAYEALWLFNQMRTESS-APDAITLVSTLSASAILGAVQVGSSLH 482
           +I+WN++I GY++N  A EAL LFN +  E   +PD  T+   L A A L A   G  +H
Sbjct: 474 IISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIH 533

Query: 483 AYSIKEGLFSSNLYIGTALLNFYAKCGDAKSARMVFDSMGDKNIITWSAMIGGYGVQGDG 542
            Y ++ G FS   ++  +L++ YAKCG    A M+FD +  K++++W+ MI GYG+ G G
Sbjct: 534 GYIMRNGYFSDR-HVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFG 593

Query: 543 SGSLAIFSDMLKEDLKPNEIIFTTVLSACSYSGMVEEGWRYFKSMSEDYNFAPSMKHYAC 602
             ++A+F+ M +  ++ +EI F ++L ACS+SG+V+EGWR+F  M  +    P+++HYAC
Sbjct: 594 KEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYAC 653

Query: 603 MVDLLARSGRLDEALDFIKKMPIQPNISLYGAFLHGCGLYSRFDLGEMAVKEMLQLHPNE 662
           +VD+LAR+G L +A  FI+ MPI P+ +++GA L GC ++    L E   +++ +L P  
Sbjct: 654 IVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPEN 713

Query: 663 ACYYVLLSNLYASDGRWGQVNEIRQLMLQRGLNKVPGCSSIEKTG 700
             YYVL++N+YA   +W QV  +R+ + QRGL K PGCS IE  G
Sbjct: 714 TGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKG 746

[Close]

BLAST of Sed0027922 vs. ExPASy TrEMBL
Match: A0A6J1KBI2 (pentatricopeptide repeat-containing protein At2g03380, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111492392 PE=4 SV=1)

HSP 1 Score: 1234.2 bits (3192), Expect = 0.0e+00
Identity = 600/700 (85.71%), Postives = 650/700 (92.86%), Query Frame = 0


Query: 1   MLQRFTSHPRTFLRLAGPLLEMGHHKSCSTCAPQLQVSELDQTMGSVHFISLNSCFHLLG 60
           MLQRF S PR F RLAGPLLEMGHH S ST A Q  +S+LDQTM SV FISL+SCF+ +G
Sbjct: 1   MLQRFFSLPRIFSRLAGPLLEMGHHISYSTYASQPPLSDLDQTMASVQFISLHSCFYFMG 60

Query: 61  LCKHIDTLIKFHGLLIVHGLVGNLLCDTKLVGVYGALGDVGSARKVFDQMPDPDFYAWKV 120
           LC++IDTLIKFHGLLIVHGLVGNLLCDTKLVGVYGALGDVGSAR VFDQM DPDFYAWKV
Sbjct: 61  LCRNIDTLIKFHGLLIVHGLVGNLLCDTKLVGVYGALGDVGSARMVFDQMRDPDFYAWKV 120

Query: 121 MVRWYFLNDMFVGVIPFYNRMRLSFRDCDNIIFSIILKACSELREIVEGRKVHCQIVKVG 180
           M+RWYFLNDMF  +IPFYNRMR+SFR+CDNIIFSIILKAC ELREI EGRKVHCQIVKVG
Sbjct: 121 MIRWYFLNDMFANIIPFYNRMRMSFRECDNIIFSIILKACCELREIDEGRKVHCQIVKVG 180

Query: 181 GPDGFVLTGLIDMYAKCGQISCSSVVFEGIVDKDVVSWTSMISGYVQNDCAEEGLILFNR 240
           GPD FVLTGLIDMY KCGQI CSS VFEGI+DK+VVSWT+MI+GYVQNDCAEEGL+LFNR
Sbjct: 181 GPDSFVLTGLIDMYGKCGQIECSSAVFEGIIDKNVVSWTTMIAGYVQNDCAEEGLVLFNR 240

Query: 241 MREALVVSNQFTFGSIISACTKLRALHQGKWVHGYAIKNVVQLSTFVATAFLDMYVKCGQ 300
           MRE+LV SNQFT GSII+ACT+LRALHQGKWVHGYAIKNV++LS+F+ATAFLDMYVKCGQ
Sbjct: 241 MRESLVESNQFTLGSIITACTRLRALHQGKWVHGYAIKNVIELSSFLATAFLDMYVKCGQ 300

Query: 301 TREARMIFDGLPIIDLVSWTAMIVGYTQAGQPTEALRLFTDEIRYDLLPNSVTAASVLSS 360
           TR+ARMIFD LP IDLVSWTAMIVGYTQAGQP EAL LFTD+IR  LLPNSVTAAS+LS+
Sbjct: 301 TRDARMIFDELPTIDLVSWTAMIVGYTQAGQPNEALSLFTDKIRSGLLPNSVTAASILSA 360

Query: 361 CSVSGNLSLGMSVHGLAIKLWLEECAVKNALIDMYAKCNLIDDARVIFHGVFEKDVITWN 420
           CSVSGNLS+GMSVHGL IKL L ECAVKNALIDMYAKC++IDDA V+F GV EKDVITWN
Sbjct: 361 CSVSGNLSIGMSVHGLGIKLGLAECAVKNALIDMYAKCHMIDDAYVVFLGVLEKDVITWN 420

Query: 421 SMISGYAQNGSAYEALWLFNQMRTESSAPDAITLVSTLSASAILGAVQVGSSLHAYSIKE 480
           SMISGY QNGSAY+AL LFNQMR++S APDAITLVSTLSASAILGAVQ+GSSLHAYSIKE
Sbjct: 421 SMISGYTQNGSAYDALRLFNQMRSDSLAPDAITLVSTLSASAILGAVQLGSSLHAYSIKE 480

Query: 481 GLFSSNLYIGTALLNFYAKCGDAKSARMVFDSMGDKNIITWSAMIGGYGVQGDGSGSLAI 540
           GLFSSNLYIGTALLN YAKCGDAKSARMVFDSMGDKNIITWSAMIGGYGVQGDGSGSLAI
Sbjct: 481 GLFSSNLYIGTALLNLYAKCGDAKSARMVFDSMGDKNIITWSAMIGGYGVQGDGSGSLAI 540

Query: 541 FSDMLKEDLKPNEIIFTTVLSACSYSGMVEEGWRYFKSMSEDYNFAPSMKHYACMVDLLA 600
           FSDMLKEDLKPN++IFTTVLSACSYSGMVEEGW+YFKSMS+DYN+APSMKHYACMVDLL+
Sbjct: 541 FSDMLKEDLKPNDVIFTTVLSACSYSGMVEEGWKYFKSMSQDYNYAPSMKHYACMVDLLS 600

Query: 601 RSGRLDEALDFIKKMPIQPNISLYGAFLHGCGLYSRFDLGEMAVKEMLQLHPNEACYYVL 660
           RSGRL+EALDFIKKMP+QP+ISLYGAFLHGCGLYSRFDLGE+ V+EML+LHPNEAC YVL
Sbjct: 601 RSGRLEEALDFIKKMPVQPDISLYGAFLHGCGLYSRFDLGEVIVREMLELHPNEACLYVL 660

Query: 661 LSNLYASDGRWGQVNEIRQLMLQRGLNKVPGCSSIEKTGG 701
           LSNLYASDGRWGQVNE+R LML+RGL KVPG S +E   G
Sbjct: 661 LSNLYASDGRWGQVNEVRDLMLRRGLKKVPGYSLVETNAG 700

[Close]

BLAST of Sed0027922 vs. ExPASy TrEMBL
Match: A0A6J1GZK8 (pentatricopeptide repeat-containing protein At2g03380, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111458927 PE=4 SV=1)

HSP 1 Score: 1224.2 bits (3166), Expect = 0.0e+00
Identity = 598/701 (85.31%), Postives = 650/701 (92.72%), Query Frame = 0


Query: 1   MLQRFTSHPRTFLRLAGPLLEMGHHKSCSTCAPQLQVSELDQTMGSVHFISLNSCFHLLG 60
           MLQRF S PR F RLAGPLLEMGHH S ST A Q  +S+LDQTM SV FISL+SCF+ +G
Sbjct: 1   MLQRFFSLPRIFSRLAGPLLEMGHHISYSTYASQPPLSDLDQTMASVQFISLHSCFYFMG 60

Query: 61  LCKHIDTLIKFHGLLIVHGLVGNLLCDTKLVGVYGALGDVGSARKVFDQMPDPDFYAWKV 120
           LC++IDTLIKFHGLLIVHGLVGNLLCDTKLVGVYGALGDVGSAR VFDQM DPDFYAWKV
Sbjct: 61  LCRNIDTLIKFHGLLIVHGLVGNLLCDTKLVGVYGALGDVGSARMVFDQMRDPDFYAWKV 120

Query: 121 MVRWYFLNDMFVGVIPFYNRMRLSFRDCDNIIFSIILKACSELREIVEGRKVHCQIVKVG 180
           M+RWYFLNDMF  +IPFYNRMR+SF++CDNIIFSIILKACSELREI EGRKVHCQIVKVG
Sbjct: 121 MIRWYFLNDMFANIIPFYNRMRMSFKECDNIIFSIILKACSELREIDEGRKVHCQIVKVG 180

Query: 181 GPDGFVLTGLIDMYAKCGQISCSSVVFEGIVDKDVVSWTSMISGYVQNDCAEEGLILFNR 240
           GPD FVLTGLIDMY KCGQI CSS VFEGI+DK+VVSWT+MI+GYVQNDCAEEGL+LFNR
Sbjct: 181 GPDSFVLTGLIDMYGKCGQIECSSAVFEGIIDKNVVSWTTMIAGYVQNDCAEEGLVLFNR 240

Query: 241 MREALVVSNQFTFGSIISACTKLRALHQGKWVHGYAIKNVV-QLSTFVATAFLDMYVKCG 300
           MRE+LV SNQFT GSII+ACT+LRALHQGKWVHGYAIKNV+ +L++F+ATAFLDMYVKCG
Sbjct: 241 MRESLVESNQFTLGSIITACTRLRALHQGKWVHGYAIKNVIFELNSFLATAFLDMYVKCG 300

Query: 301 QTREARMIFDGLPIIDLVSWTAMIVGYTQAGQPTEALRLFTDEIRYDLLPNSVTAASVLS 360
           QTR+ARMIFD LP IDLVSWTAMIVGY+QAGQP EALRLFTD+IR  LLPNSVTAAS+LS
Sbjct: 301 QTRDARMIFDELPSIDLVSWTAMIVGYSQAGQPNEALRLFTDKIRSGLLPNSVTAASILS 360

Query: 361 SCSVSGNLSLGMSVHGLAIKLWLEECAVKNALIDMYAKCNLIDDARVIFHGVFEKDVITW 420
           +CSVSGNLS+GM VHGL IKL LEECAVKNALIDMYAKC++IDDA V+F GV EKDVITW
Sbjct: 361 ACSVSGNLSIGMLVHGLGIKLGLEECAVKNALIDMYAKCHMIDDAYVVFLGVLEKDVITW 420

Query: 421 NSMISGYAQNGSAYEALWLFNQMRTESSAPDAITLVSTLSASAILGAVQVGSSLHAYSIK 480
           NSMISGYAQ+GSAY+AL LFNQMR++S APDAITLVS LSASAILGAVQVGSSLH YSIK
Sbjct: 421 NSMISGYAQSGSAYDALRLFNQMRSDSLAPDAITLVSALSASAILGAVQVGSSLHVYSIK 480

Query: 481 EGLFSSNLYIGTALLNFYAKCGDAKSARMVFDSMGDKNIITWSAMIGGYGVQGDGSGSLA 540
           EGLFSSNLYIGTALLN YAKCGDAKSARMVFDSMGDKNIITWSAMIGGYGVQGDGSGSLA
Sbjct: 481 EGLFSSNLYIGTALLNLYAKCGDAKSARMVFDSMGDKNIITWSAMIGGYGVQGDGSGSLA 540

Query: 541 IFSDMLKEDLKPNEIIFTTVLSACSYSGMVEEGWRYFKSMSEDYNFAPSMKHYACMVDLL 600
           IFSDMLKEDLKPN++IFTTVLSACSYSGMVEEGWRYFKSMS+DYN+APSMKHYACMVDLL
Sbjct: 541 IFSDMLKEDLKPNDVIFTTVLSACSYSGMVEEGWRYFKSMSQDYNYAPSMKHYACMVDLL 600

Query: 601 ARSGRLDEALDFIKKMPIQPNISLYGAFLHGCGLYSRFDLGEMAVKEMLQLHPNEACYYV 660
           +RSGRL+EALDFIKKMP+QP+ISLYGAFLHGCGLYSRFDLGE+ V+EML+LHPNEA  YV
Sbjct: 601 SRSGRLEEALDFIKKMPVQPDISLYGAFLHGCGLYSRFDLGEVIVREMLELHPNEASLYV 660

Query: 661 LLSNLYASDGRWGQVNEIRQLMLQRGLNKVPGCSSIEKTGG 701
           LLSNLYASDGRWGQVNE+R LML+RGL KVPG S +E   G
Sbjct: 661 LLSNLYASDGRWGQVNEVRDLMLRRGLKKVPGYSLVETNAG 701

[Close]

BLAST of Sed0027922 vs. ExPASy TrEMBL
Match: A0A1S4E1F1 (pentatricopeptide repeat-containing protein At2g03380, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103496696 PE=4 SV=1)

HSP 1 Score: 1204.9 bits (3116), Expect = 0.0e+00
Identity = 590/700 (84.29%), Postives = 636/700 (90.86%), Query Frame = 0


Query: 1   MLQRFTSHPRTFLRLAGPLLEMGHHKSCSTCAPQLQVSELDQTMGSVHFISLNSCFHLLG 60
           MLQRF S PR F  L G LL+MGH  S ST A    +S+L QTM SV FISL+SC +L+G
Sbjct: 1   MLQRFFSLPRAFSHLTGSLLQMGHRMSYSTYASHPPLSDLHQTMPSVQFISLHSCCYLMG 60

Query: 61  LCKHIDTLIKFHGLLIVHGLVGNLLCDTKLVGVYGALGDVGSARKVFDQMPDPDFYAWKV 120
           L ++IDTLIKFHGLLIVHGL+GNLLCDTKLVGVYGALGDV SAR VFDQMPDPDFYAWKV
Sbjct: 61  LFRNIDTLIKFHGLLIVHGLIGNLLCDTKLVGVYGALGDVRSARMVFDQMPDPDFYAWKV 120

Query: 121 MVRWYFLNDMFVGVIPFYNRMRLSFRDCDNIIFSIILKACSELREIVEGRKVHCQIVKVG 180
           M+RWYFLND+FV VIPFYN MR+SFR+CDNIIFSIILKACSELREI EGRKVHCQIVKVG
Sbjct: 121 MIRWYFLNDLFVDVIPFYNCMRMSFRECDNIIFSIILKACSELREIDEGRKVHCQIVKVG 180

Query: 181 GPDGFVLTGLIDMYAKCGQISCSSVVFEGIVDKDVVSWTSMISGYVQNDCAEEGLILFNR 240
           GPD FV+TGLIDMY KC Q+ CSS VFE I+DK+VVSWTSMI+GYVQN+CAEEGL+LFNR
Sbjct: 181 GPDSFVMTGLIDMYGKCRQVECSSAVFEEIMDKNVVSWTSMIAGYVQNNCAEEGLVLFNR 240

Query: 241 MREALVVSNQFTFGSIISACTKLRALHQGKWVHGYAIKNVVQLSTFVATAFLDMYVKCGQ 300
           MR+ALV SN FT GSII+ACTKLRALHQGKWVHGYAIKN+V+ S+F+AT FLDMYVKCGQ
Sbjct: 241 MRDALVESNPFTLGSIINACTKLRALHQGKWVHGYAIKNIVEFSSFLATTFLDMYVKCGQ 300

Query: 301 TREARMIFDGLPIIDLVSWTAMIVGYTQAGQPTEALRLFTDEIRYDLLPNSVTAASVLSS 360
           TR+ARMIFD LP IDLVSWTAMIVGYTQA QP + LRLF DEIR DLLPNSVTAASVLS+
Sbjct: 301 TRDARMIFDELPTIDLVSWTAMIVGYTQASQPNDGLRLFADEIRSDLLPNSVTAASVLSA 360

Query: 361 CSVSGNLSLGMSVHGLAIKLWLEECAVKNALIDMYAKCNLIDDARVIFHGVFEKDVITWN 420
           CSVSGNL+LGMSVHGL IKL LEECAVKNALIDMYAKC+ I DA VIFHGV EKDVITWN
Sbjct: 361 CSVSGNLNLGMSVHGLGIKLGLEECAVKNALIDMYAKCHKIGDAYVIFHGVLEKDVITWN 420

Query: 421 SMISGYAQNGSAYEALWLFNQMRTESSAPDAITLVSTLSASAILGAVQVGSSLHAYSIKE 480
           SMISGYAQNGSAY+AL LFNQMR+ S APDAITLVSTLSASA LGAVQVGSSLHAYS+KE
Sbjct: 421 SMISGYAQNGSAYDALRLFNQMRSYSLAPDAITLVSTLSASATLGAVQVGSSLHAYSVKE 480

Query: 481 GLFSSNLYIGTALLNFYAKCGDAKSARMVFDSMGDKNIITWSAMIGGYGVQGDGSGSLAI 540
           GLFSSNLYIGTALLNFYAKCGDAKSAR VFDSMGDKNIITWSAMIGGYGVQGDGSGSL+I
Sbjct: 481 GLFSSNLYIGTALLNFYAKCGDAKSARTVFDSMGDKNIITWSAMIGGYGVQGDGSGSLSI 540

Query: 541 FSDMLKEDLKPNEIIFTTVLSACSYSGMVEEGWRYFKSMSEDYNFAPSMKHYACMVDLLA 600
           FSDMLKEDLKPNE+IFTT+LSACS SGMVEEGWRYFKSM +DYNF PSMKHYACMVDLLA
Sbjct: 541 FSDMLKEDLKPNEVIFTTILSACSSSGMVEEGWRYFKSMIQDYNFVPSMKHYACMVDLLA 600

Query: 601 RSGRLDEALDFIKKMPIQPNISLYGAFLHGCGLYSRFDLGEMAVKEMLQLHPNEACYYVL 660
           RSGRLDEALDFIKKMP+QP++SLYGAFLHGCGLYSRFDLGE+ V+EMLQLHPNEACYYVL
Sbjct: 601 RSGRLDEALDFIKKMPVQPDVSLYGAFLHGCGLYSRFDLGEVVVREMLQLHPNEACYYVL 660

Query: 661 LSNLYASDGRWGQVNEIRQLMLQRGLNKVPGCSSIEKTGG 701
           LSNLYASDG+WGQVNE+R LMLQRGLNKVPG S +E   G
Sbjct: 661 LSNLYASDGKWGQVNEVRDLMLQRGLNKVPGYSLVETNAG 700

[Close]

BLAST of Sed0027922 vs. ExPASy TrEMBL
Match: A0A5D3DQT2 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold436G001190 PE=4 SV=1)

HSP 1 Score: 1203.0 bits (3111), Expect = 0.0e+00
Identity = 589/696 (84.63%), Postives = 635/696 (91.24%), Query Frame = 0


Query: 1   MLQRFTSHPRTFLRLAGPLLEMGHHKSCSTCAPQLQVSELDQTMGSVHFISLNSCFHLLG 60
           MLQRF S PR F  L G LL+MGH  S ST A    +S+L QTM SV FISL+SC +L+G
Sbjct: 1   MLQRFFSLPRAFSHLTGSLLQMGHRMSYSTYASHPPLSDLHQTMPSVQFISLHSCCYLMG 60

Query: 61  LCKHIDTLIKFHGLLIVHGLVGNLLCDTKLVGVYGALGDVGSARKVFDQMPDPDFYAWKV 120
           L ++IDTLIKFHGLLIVHGL+GNLLCDTKLVGVYGALGDV SAR VFDQMPDPDFYAWKV
Sbjct: 61  LFRNIDTLIKFHGLLIVHGLIGNLLCDTKLVGVYGALGDVRSARMVFDQMPDPDFYAWKV 120

Query: 121 MVRWYFLNDMFVGVIPFYNRMRLSFRDCDNIIFSIILKACSELREIVEGRKVHCQIVKVG 180
           M+RWYFLND+FV VIPFYN MR+SFR+CDNIIFSIILKACSELREI EGRKVHCQIVKVG
Sbjct: 121 MIRWYFLNDLFVDVIPFYNCMRMSFRECDNIIFSIILKACSELREIDEGRKVHCQIVKVG 180

Query: 181 GPDGFVLTGLIDMYAKCGQISCSSVVFEGIVDKDVVSWTSMISGYVQNDCAEEGLILFNR 240
           GPD FV+TGLIDMY KC Q+ CSS VFE I+DK+VVSWTSMI+GYVQN+CAEEGL+LFNR
Sbjct: 181 GPDSFVMTGLIDMYGKCRQVECSSAVFEEIMDKNVVSWTSMIAGYVQNNCAEEGLVLFNR 240

Query: 241 MREALVVSNQFTFGSIISACTKLRALHQGKWVHGYAIKNVVQLSTFVATAFLDMYVKCGQ 300
           MR+ALV SN FT GSII+ACTKLRALHQGKWVHGYAIKN+V+ S+F+AT FLDMYVKCGQ
Sbjct: 241 MRDALVESNPFTLGSIINACTKLRALHQGKWVHGYAIKNIVEFSSFLATTFLDMYVKCGQ 300

Query: 301 TREARMIFDGLPIIDLVSWTAMIVGYTQAGQPTEALRLFTDEIRYDLLPNSVTAASVLSS 360
           TR+ARMIFD LP IDLVSWTAMIVGYTQA QP + LRLF DEIR DLLPNSVTAASVLS+
Sbjct: 301 TRDARMIFDELPTIDLVSWTAMIVGYTQASQPNDGLRLFADEIRSDLLPNSVTAASVLSA 360

Query: 361 CSVSGNLSLGMSVHGLAIKLWLEECAVKNALIDMYAKCNLIDDARVIFHGVFEKDVITWN 420
           CSVSGNL+LGMSVHGL IKL LEECAVKNALIDMYAKC+ I DA VIFHGV EKDVITWN
Sbjct: 361 CSVSGNLNLGMSVHGLGIKLGLEECAVKNALIDMYAKCHKIGDAYVIFHGVLEKDVITWN 420

Query: 421 SMISGYAQNGSAYEALWLFNQMRTESSAPDAITLVSTLSASAILGAVQVGSSLHAYSIKE 480
           SMISGYAQNGSAY+AL LFNQMR+ S APDAITLVSTLSASA LGAVQVGSSLHAYS+KE
Sbjct: 421 SMISGYAQNGSAYDALRLFNQMRSYSLAPDAITLVSTLSASATLGAVQVGSSLHAYSVKE 480

Query: 481 GLFSSNLYIGTALLNFYAKCGDAKSARMVFDSMGDKNIITWSAMIGGYGVQGDGSGSLAI 540
           GLFSSNLYIGTALLNFYAKCGDAKSAR VFDSMGDKNIITWSAMIGGYGVQGDGSGSL+I
Sbjct: 481 GLFSSNLYIGTALLNFYAKCGDAKSARTVFDSMGDKNIITWSAMIGGYGVQGDGSGSLSI 540

Query: 541 FSDMLKEDLKPNEIIFTTVLSACSYSGMVEEGWRYFKSMSEDYNFAPSMKHYACMVDLLA 600
           FSDMLKEDLKPNE+IFTT+LSACS SGMVEEGWRYFKSM +DYNF PSMKHYACMVDLLA
Sbjct: 541 FSDMLKEDLKPNEVIFTTILSACSSSGMVEEGWRYFKSMIQDYNFVPSMKHYACMVDLLA 600

Query: 601 RSGRLDEALDFIKKMPIQPNISLYGAFLHGCGLYSRFDLGEMAVKEMLQLHPNEACYYVL 660
           RSGRLDEALDFIKKMP+QP++SLYGAFLHGCGLYSRFDLGE+ V+EMLQLHPNEACYYVL
Sbjct: 601 RSGRLDEALDFIKKMPVQPDVSLYGAFLHGCGLYSRFDLGEVVVREMLQLHPNEACYYVL 660

Query: 661 LSNLYASDGRWGQVNEIRQLMLQRGLNKVPGCSSIE 697
           LSNLYASDG+WGQVNE+R LMLQRGLNKVPG S +E
Sbjct: 661 LSNLYASDGKWGQVNEVRDLMLQRGLNKVPGYSLVE 696

[Close]

BLAST of Sed0027922 vs. ExPASy TrEMBL
Match: A0A6J1DCB9 (pentatricopeptide repeat-containing protein At2g03380, mitochondrial isoform X2 OS=Momordica charantia OX=3673 GN=LOC111018771 PE=4 SV=1)

HSP 1 Score: 1201.8 bits (3108), Expect = 0.0e+00
Identity = 593/700 (84.71%), Postives = 636/700 (90.86%), Query Frame = 0


Query: 1   MLQRFTSHPRTFLRLAGPLLEMGHHKSCSTCAPQLQVSELDQTMGSVHFISLNSCFHLLG 60
           MLQRF S  R+F RLAG L+E+G +  CST  PQ Q+SELDQTM SV FISLNS F+L+G
Sbjct: 1   MLQRFLSLRRSFSRLAGSLIELG-NMYCSTYPPQPQLSELDQTMASVQFISLNSSFYLMG 60

Query: 61  LCKHIDTLIKFHGLLIVHGLVGNLLCDTKLVGVYGALGDVGSARKVFDQMPDPDFYAWKV 120
           LC++IDTLIKFHGLLIVHGLVGNLLCDTKLVGVYGALGDV SAR VFDQMPD DFYAWKV
Sbjct: 61  LCRNIDTLIKFHGLLIVHGLVGNLLCDTKLVGVYGALGDVDSARLVFDQMPDRDFYAWKV 120

Query: 121 MVRWYFLNDMFVGVIPFYNRMRLSFRDCDNIIFSIILKACSELREIVEGRKVHCQIVKVG 180
           M+RWYFLNDMF  +IPFYN MR+SF + DNIIFSIILKACSELREIVEGRKVH QIVKVG
Sbjct: 121 MIRWYFLNDMFADIIPFYNSMRMSFTESDNIIFSIILKACSELREIVEGRKVHGQIVKVG 180

Query: 181 GPDGFVLTGLIDMYAKCGQISCSSVVFEGIVDKDVVSWTSMISGYVQNDCAEEGLILFNR 240
           GPD FVLTGL+DMYAKCGQI CS  VFEGI+DK+VVSWTSMI+GYVQNDCAEEGL+LFNR
Sbjct: 181 GPDSFVLTGLVDMYAKCGQIECSCAVFEGIIDKNVVSWTSMIAGYVQNDCAEEGLVLFNR 240

Query: 241 MREALVVSNQFTFGSIISACTKLRALHQGKWVHGYAIKNVVQLSTFVATAFLDMYVKCGQ 300
           MR ALV SNQFT GSII+ACTKLRALHQGKWVHGYAIKNVV+LS F+ T FLDMYVKCGQ
Sbjct: 241 MRAALVESNQFTLGSIITACTKLRALHQGKWVHGYAIKNVVKLSAFLTTTFLDMYVKCGQ 300

Query: 301 TREARMIFDGLPIIDLVSWTAMIVGYTQAGQPTEALRLFTDEIRYDLLPNSVTAASVLSS 360
           TR+AR++FD LP ID VSWTAMIVGYTQAGQP EALRLF  EIR DLLPNSVTAA+VLSS
Sbjct: 301 TRDARIMFDELPTIDRVSWTAMIVGYTQAGQPNEALRLFAGEIRSDLLPNSVTAATVLSS 360

Query: 361 CSVSGNLSLGMSVHGLAIKLWLEECAVKNALIDMYAKCNLIDDARVIFHGVFEKDVITWN 420
           CSVSGNL+LGMSVHGL IKL LEEC VKNALIDMYAKC++ID+A VIFHGV EKDVITWN
Sbjct: 361 CSVSGNLNLGMSVHGLGIKLGLEECGVKNALIDMYAKCHMIDEAYVIFHGVLEKDVITWN 420

Query: 421 SMISGYAQNGSAYEALWLFNQMRTESSAPDAITLVSTLSASAILGAVQVGSSLHAYSIKE 480
           SMISGYAQNG+A EAL LFNQMR+ S+APDAITLVS LSASA LGAV VGSSLHAYSIK 
Sbjct: 421 SMISGYAQNGTANEALLLFNQMRSSSAAPDAITLVSALSASATLGAVHVGSSLHAYSIKV 480

Query: 481 GLFSSNLYIGTALLNFYAKCGDAKSARMVFDSMGDKNIITWSAMIGGYGVQGDGSGSLAI 540
           GLFS NLYIGT LLNFYAKCGDAKSARMVFDSMGDKNIITWSAMIGGYGVQGDGSGSLAI
Sbjct: 481 GLFSLNLYIGTTLLNFYAKCGDAKSARMVFDSMGDKNIITWSAMIGGYGVQGDGSGSLAI 540

Query: 541 FSDMLKEDLKPNEIIFTTVLSACSYSGMVEEGWRYFKSMSEDYNFAPSMKHYACMVDLLA 600
           FSDMLKED+KPNE+IFTTVLSACSYSGMV EGWRYFKSMS+DYNF PSMKHYACMVDLLA
Sbjct: 541 FSDMLKEDVKPNEVIFTTVLSACSYSGMVAEGWRYFKSMSQDYNFMPSMKHYACMVDLLA 600

Query: 601 RSGRLDEALDFIKKMPIQPNISLYGAFLHGCGLYSRFDLGEMAVKEMLQLHPNEACYYVL 660
           RSGRLDEALDFIKKMP+QP+ISLYGAFLHGCGLYSRFDLGE+ VKEMLQLHP+EACYYVL
Sbjct: 601 RSGRLDEALDFIKKMPVQPDISLYGAFLHGCGLYSRFDLGEVVVKEMLQLHPDEACYYVL 660

Query: 661 LSNLYASDGRWGQVNEIRQLMLQRGLNKVPGCSSIEKTGG 701
           LSNLYASDGRWGQVN++R+LM QRGLNK PG S +E   G
Sbjct: 661 LSNLYASDGRWGQVNQVRELMQQRGLNKDPGYSLVETDAG 699

[Close]

BLAST of Sed0027922 vs. TAIR 10
Match: AT2G03380.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 759.6 bits (1960), Expect = 2.2e-219
Identity = 370/653 (56.66%), Postives = 489/653 (74.89%), Query Frame = 0


Query: 46  SVHFISLNSCFHLLGLCKHIDTLIKFHGLLIVHGLVGNLLCDTKLVGVYGALGDVGSARK 105
           S+H+ + + CF LL  C +ID+L + HG+L  +GL+G++   TKLV +YG  G    AR 
Sbjct: 38  SLHYAASSPCFLLLSKCTNIDSLRQSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARL 97

Query: 106 VFDQMPDPDFYAWKVMVRWYFLNDMFVGVIPFYN-RMRLSFRDCDNIIFSIILKACSELR 165
           VFDQ+P+PDFY WKVM+R Y LN   V V+  Y+  M+  FR  D+I+FS  LKAC+EL+
Sbjct: 98  VFDQIPEPDFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFR-YDDIVFSKALKACTELQ 157

Query: 166 EIVEGRKVHCQIVKVGGPDGFVLTGLIDMYAKCGQISCSSVVFEGIVDKDVVSWTSMISG 225
           ++  G+K+HCQ+VKV   D  VLTGL+DMYAKCG+I  +  VF  I  ++VV WTSMI+G
Sbjct: 158 DLDNGKKIHCQLVKVPSFDNVVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAG 217

Query: 226 YVQNDCAEEGLILFNRMREALVVSNQFTFGSIISACTKLRALHQGKWVHGYAIKNVVQLS 285
           YV+ND  EEGL+LFNRMRE  V+ N++T+G++I ACTKL ALHQGKW HG  +K+ ++LS
Sbjct: 218 YVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELS 277

Query: 286 TFVATAFLDMYVKCGQTREARMIFDGLPIIDLVSWTAMIVGYTQAGQPTEALRLFTDEIR 345
           + + T+ LDMYVKCG    AR +F+    +DLV WTAMIVGYT  G   EAL LF     
Sbjct: 278 SCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKG 337

Query: 346 YDLLPNSVTAASVLSSCSVSGNLSLGMSVHGLAIKLWLEECAVKNALIDMYAKCNLIDDA 405
            ++ PN VT ASVLS C +  NL LG SVHGL+IK+ + +  V NAL+ MYAKC    DA
Sbjct: 338 VEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIWDTNVANALVHMYAKCYQNRDA 397

Query: 406 RVIFHGVFEKDVITWNSMISGYAQNGSAYEALWLFNQMRTESSAPDAITLVSTLSASAIL 465
           + +F    EKD++ WNS+ISG++QNGS +EAL+LF++M +ES  P+ +T+ S  SA A L
Sbjct: 398 KYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASL 457

Query: 466 GAVQVGSSLHAYSIKEG-LFSSNLYIGTALLNFYAKCGDAKSARMVFDSMGDKNIITWSA 525
           G++ VGSSLHAYS+K G L SS++++GTALL+FYAKCGD +SAR++FD++ +KN ITWSA
Sbjct: 458 GSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSA 517

Query: 526 MIGGYGVQGDGSGSLAIFSDMLKEDLKPNEIIFTTVLSACSYSGMVEEGWRYFKSMSEDY 585
           MIGGYG QGD  GSL +F +MLK+  KPNE  FT++LSAC ++GMV EG +YF SM +DY
Sbjct: 518 MIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDY 577

Query: 586 NFAPSMKHYACMVDLLARSGRLDEALDFIKKMPIQPNISLYGAFLHGCGLYSRFDLGEMA 645
           NF PS KHY CMVD+LAR+G L++ALD I+KMPIQP++  +GAFLHGCG++SRFDLGE+ 
Sbjct: 578 NFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIV 637

Query: 646 VKEMLQLHPNEACYYVLLSNLYASDGRWGQVNEIRQLMLQRGLNKVPGCSSIE 697
           +K+ML LHP++A YYVL+SNLYASDGRW Q  E+R LM QRGL+K+ G S++E
Sbjct: 638 IKKMLDLHPDDASYYVLVSNLYASDGRWNQAKEVRNLMKQRGLSKIAGHSTME 689

[Close]

BLAST of Sed0027922 vs. TAIR 10
Match: AT1G11290.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 448.0 bits (1151), Expect = 1.4e-125
Identity = 234/643 (36.39%), Postives = 378/643 (58.79%), Query Frame = 0


Query: 58  LLGLCKHIDTLIKFHGLLIVHGLVGNLLCDTKLVGVYGALGDVGSARKVFDQMPDPDFYA 117
           LL  C  +  L +   L+  +GL       TKLV ++   G V  A +VF+ +       
Sbjct: 43  LLERCSSLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVL 102

Query: 118 WKVMVRWYFLNDMFVGVIPFYNRMRLSFRDCDNII--FSIILKACSELREIVEGRKVHCQ 177
           +  M++ +         + F+ RMR  + D + ++  F+ +LK C +  E+  G+++H  
Sbjct: 103 YHTMLKGFAKVSDLDKALQFFVRMR--YDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGL 162

Query: 178 IVKVG-GPDGFVLTGLIDMYAKCGQISCSSVVFEGIVDKDVVSWTSMISGYVQNDCAEEG 237
           +VK G   D F +TGL +MYAKC Q++ +  VF+ + ++D+VSW ++++GY QN  A   
Sbjct: 163 LVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMA 222

Query: 238 LILFNRMREALVVSNQFTFGSIISACTKLRALHQGKWVHGYAIKNVVQLSTFVATAFLDM 297
           L +   M E  +  +  T  S++ A + LR +  GK +HGYA+++       ++TA +DM
Sbjct: 223 LEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDM 282

Query: 298 YVKCGQTREARMIFDGLPIIDLVSWTAMIVGYTQAGQPTEALRLFTDEIRYDLLPNSVTA 357
           Y KCG    AR +FDG+   ++VSW +MI  Y Q   P EA+ +F   +   + P  V+ 
Sbjct: 283 YAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSV 342

Query: 358 ASVLSSCSVSGNLSLGMSVHGLAIKLWLE-ECAVKNALIDMYAKCNLIDDARVIFHGVFE 417
              L +C+  G+L  G  +H L+++L L+   +V N+LI MY KC  +D A  +F  +  
Sbjct: 343 MGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQS 402

Query: 418 KDVITWNSMISGYAQNGSAYEALWLFNQMRTESSAPDAITLVSTLSASAILGAVQVGSSL 477
           + +++WN+MI G+AQNG   +AL  F+QMR+ +  PD  T VS ++A A L        +
Sbjct: 403 RTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWI 462

Query: 478 HAYSIKEGLFSSNLYIGTALLNFYAKCGDAKSARMVFDSMGDKNIITWSAMIGGYGVQGD 537
           H   ++  L   N+++ TAL++ YAKCG    AR++FD M ++++ TW+AMI GYG  G 
Sbjct: 463 HGVVMRSCL-DKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGF 522

Query: 538 GSGSLAIFSDMLKEDLKPNEIIFTTVLSACSYSGMVEEGWRYFKSMSEDYNFAPSMKHYA 597
           G  +L +F +M K  +KPN + F +V+SACS+SG+VE G + F  M E+Y+   SM HY 
Sbjct: 523 GKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYG 582

Query: 598 CMVDLLARSGRLDEALDFIKKMPIQPNISLYGAFLHGCGLYSRFDLGEMAVKEMLQLHPN 657
            MVDLL R+GRL+EA DFI +MP++P +++YGA L  C ++   +  E A + + +L+P+
Sbjct: 583 AMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPD 642

Query: 658 EACYYVLLSNLYASDGRWGQVNEIRQLMLQRGLNKVPGCSSIE 697
           +  Y+VLL+N+Y +   W +V ++R  ML++GL K PGCS +E
Sbjct: 643 DGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVE 682

[Close]

BLAST of Sed0027922 vs. TAIR 10
Match: AT4G33990.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 432.6 bits (1111), Expect = 6.3e-121
Identity = 236/644 (36.65%), Postives = 375/644 (58.23%), Query Frame = 0


Query: 58  LLGLCKHIDTLIKFHGLLIVHGLVGNLLCDTKLVGVYGALGDVGSARKVFDQMPDPDFYA 117
           L   C ++ +    H  L+V   + N+    KLV +Y  LG+V  AR  FD + + D YA
Sbjct: 60  LFRYCTNLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYA 119

Query: 118 WKVMVRWYFLNDMFVGVIPFYNRMRLSF-RDCDNIIFSIILKACSELREIVEGRKVHCQI 177
           W +M+  Y        VI  ++   LS     D   F  +LKAC   R +++G K+HC  
Sbjct: 120 WNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKAC---RTVIDGNKIHCLA 179

Query: 178 VKVGGP-DGFVLTGLIDMYAKCGQISCSSVVFEGIVDKDVVSWTSMISGYVQNDCAEEGL 237
           +K G   D +V   LI +Y++   +  + ++F+ +  +D+ SW +MISGY Q+  A+E L
Sbjct: 180 LKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEAL 239

Query: 238 ILFNRMREALVVSNQFTFGSIISACTKLRALHQGKWVHGYAIKNVVQLSTFVATAFLDMY 297
            L N +R      +  T  S++SACT+    ++G  +H Y+IK+ ++   FV+   +D+Y
Sbjct: 240 TLSNGLR----AMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLY 299

Query: 298 VKCGQTREARMIFDGLPIIDLVSWTAMIVGYTQAGQPTEALRLFTDEIRYDLLPNSVTAA 357
            + G+ R+ + +FD + + DL+SW ++I  Y    QP  A+ LF +     + P+ +T  
Sbjct: 300 AEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLI 359

Query: 358 SVLSSCSVSGNLSLGMSVHGLAIK--LWLEECAVKNALIDMYAKCNLIDDARVIFHGVFE 417
           S+ S  S  G++    SV G  ++   +LE+  + NA++ MYAK  L+D AR +F+ +  
Sbjct: 360 SLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPN 419

Query: 418 KDVITWNSMISGYAQNGSAYEALWLFNQMRTESS-APDAITLVSTLSASAILGAVQVGSS 477
            DVI+WN++ISGYAQNG A EA+ ++N M  E   A +  T VS L A +  GA++ G  
Sbjct: 420 TDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMK 479

Query: 478 LHAYSIKEGLFSSNLYIGTALLNFYAKCGDAKSARMVFDSMGDKNIITWSAMIGGYGVQG 537
           LH   +K GL+  ++++ T+L + Y KCG  + A  +F  +   N + W+ +I  +G  G
Sbjct: 480 LHGRLLKNGLY-LDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHG 539

Query: 538 DGSGSLAIFSDMLKEDLKPNEIIFTTVLSACSYSGMVEEGWRYFKSMSEDYNFAPSMKHY 597
            G  ++ +F +ML E +KP+ I F T+LSACS+SG+V+EG   F+ M  DY   PS+KHY
Sbjct: 540 HGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHY 599

Query: 598 ACMVDLLARSGRLDEALDFIKKMPIQPNISLYGAFLHGCGLYSRFDLGEMAVKEMLQLHP 657
            CMVD+  R+G+L+ AL FIK M +QP+ S++GA L  C ++   DLG++A + + ++ P
Sbjct: 600 GCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEP 659

Query: 658 NEACYYVLLSNLYASDGRWGQVNEIRQLMLQRGLNKVPGCSSIE 697
               Y+VLLSN+YAS G+W  V+EIR +   +GL K PG SS+E
Sbjct: 660 EHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSME 695

[Close]

BLAST of Sed0027922 vs. TAIR 10
Match: AT1G69350.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 416.4 bits (1069), Expect = 4.7e-116
Identity = 220/662 (33.23%), Postives = 379/662 (57.25%), Query Frame = 0


Query: 37  VSELDQTMGSVHFISLNSCFHLLGLCKHIDTLIKFHGLLIVHGLVGNLLCDTKLVGVYGA 96
           VSE  Q    V    L +C    G  +H+    K HG +I  G+  + + +T L+ +YG 
Sbjct: 92  VSETTQISKFVFPSVLRAC---AGSREHLSVGGKVHGRIIKGGVDDDAVIETSLLCMYGQ 151

Query: 97  LGDVGSARKVFDQMPDPDFYAWKVMVRWYFLNDMFVGVIPFYNRMRLSFRDCDNIIFSII 156
            G++  A KVFD MP  D  AW  +V     N   V  +  +  M     + D +    +
Sbjct: 152 TGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISV 211

Query: 157 LKACSELREIVEGRKVHCQIV-KVGGPDGFVLTGLIDMYAKCGQISCSSVVFEGIVDKDV 216
           ++ C+EL  +   R VH QI  K+   D  +   L+ MY+KCG +  S  +FE I  K+ 
Sbjct: 212 VEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNA 271

Query: 217 VSWTSMISGYVQNDCAEEGLILFNRMREALVVSNQFTFGSIISACTKLRALHQGKWVHGY 276
           VSWT+MIS Y + + +E+ L  F+ M ++ +  N  T  S++S+C  +  + +GK VHG+
Sbjct: 272 VSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGF 331

Query: 277 AIKNVVQLS-TFVATAFLDMYVKCGQTREARMIFDGLPIIDLVSWTAMIVGYTQAGQPTE 336
           A++  +  +   ++ A +++Y +CG+  +   +   +   ++V+W ++I  Y   G   +
Sbjct: 332 AVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQ 391

Query: 337 ALRLFTDEIRYDLLPNSVTAASVLSSCSVSGNLSLGMSVHGLAIKLWLEECAVKNALIDM 396
           AL LF   +   + P++ T AS +S+C  +G + LG  +HG  I+  + +  V+N+LIDM
Sbjct: 392 ALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDVSDEFVQNSLIDM 451

Query: 397 YAKCNLIDDARVIFHGVFEKDVITWNSMISGYAQNGSAYEALWLFNQMRTESSAPDAITL 456
           Y+K   +D A  +F+ +  + V+TWNSM+ G++QNG++ EA+ LF+ M       + +T 
Sbjct: 452 YSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTF 511

Query: 457 VSTLSASAILGAVQVGSSLHAYSIKEGLFSSNLYIGTALLNFYAKCGDAKSARMVFDSMG 516
           ++ + A + +G+++ G  +H   I  GL   +L+  TAL++ YAKCGD  +A  VF +M 
Sbjct: 512 LAVIQACSSIGSLEKGKWVHHKLIISGL--KDLFTDTALIDMYAKCGDLNAAETVFRAMS 571

Query: 517 DKNIITWSAMIGGYGVQGDGSGSLAIFSDMLKEDLKPNEIIFTTVLSACSYSGMVEEGWR 576
            ++I++WS+MI  YG+ G    +++ F+ M++   KPNE++F  VLSAC +SG VEEG +
Sbjct: 572 SRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEG-K 631

Query: 577 YFKSMSEDYNFAPSMKHYACMVDLLARSGRLDEALDFIKKMPIQPNISLYGAFLHGCGLY 636
           Y+ ++ + +  +P+ +H+AC +DLL+RSG L EA   IK+MP   + S++G+ ++GC ++
Sbjct: 632 YYFNLMKSFGVSPNSEHFACFIDLLSRSGDLKEAYRTIKEMPFLADASVWGSLVNGCRIH 691

Query: 637 SRFDLGEMAVKEMLQLHPNEACYYVLLSNLYASDGRWGQVNEIRQLMLQRGLNKVPGCSS 696
            + D+ +    ++  +  ++  YY LLSN+YA +G W +   +R  M    L KVPG S+
Sbjct: 692 QKMDIIKAIKNDLSDIVTDDTGYYTLLSNIYAEEGEWEEFRRLRSAMKSSNLKKVPGYSA 747

[Close]

BLAST of Sed0027922 vs. TAIR 10
Match: AT4G18750.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 416.4 bits (1069), Expect = 4.7e-116
Identity = 228/645 (35.35%), Postives = 362/645 (56.12%), Query Frame = 0


Query: 63  KHIDTLIKFHGLLIVHGLVGNLLCDTKLVGVYGALGDVGSARKVFDQMPDPDFYAWKVMV 122
           K +D  I+ +G +I   L       +KL  +Y   GD+  A +VFD++       W +++
Sbjct: 114 KEVDNFIRGNGFVIDSNL------GSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILM 173

Query: 123 RWYFLNDMFVGVIPFYNRMRLSFRDCDNIIFSIILKACSELREIVEGRKVHCQIVKVG-G 182
                +  F G I  + +M  S  + D+  FS + K+ S LR +  G ++H  I+K G G
Sbjct: 174 NELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFG 233

Query: 183 PDGFVLTGLIDMYAKCGQISCSSVVFEGIVDKDVVSWTSMISGYVQNDCAEEGLILFNRM 242
               V   L+  Y K  ++  +  VF+ + ++DV+SW S+I+GYV N  AE+GL +F +M
Sbjct: 234 ERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQM 293

Query: 243 REALVVSNQFTFGSIISACTKLRALHQGKWVHGYAIKNVVQLSTFVATAFLDMYVKCGQT 302
             + +  +  T  S+ + C   R +  G+ VH   +K             LDMY KCG  
Sbjct: 294 LVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDL 353

Query: 303 REARMIFDGLPIIDLVSWTAMIVGYTQAGQPTEALRLFTDEIRYDLLPNSVTAASVLSSC 362
             A+ +F  +    +VS+T+MI GY + G   EA++LF +     + P+  T  +VL+ C
Sbjct: 354 DSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCC 413

Query: 363 SVSGNLSLGMSVHGLAIKLWLEE------CAVKNALIDMYAKCNLIDDARVIFHGVFEKD 422
           +    L  G  VH      W++E        V NAL+DMYAKC  + +A ++F  +  KD
Sbjct: 414 ARYRLLDEGKRVHE-----WIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKD 473

Query: 423 VITWNSMISGYAQNGSAYEALWLFNQMRTESS-APDAITLVSTLSASAILGAVQVGSSLH 482
           +I+WN++I GY++N  A EAL LFN +  E   +PD  T+   L A A L A   G  +H
Sbjct: 474 IISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIH 533

Query: 483 AYSIKEGLFSSNLYIGTALLNFYAKCGDAKSARMVFDSMGDKNIITWSAMIGGYGVQGDG 542
            Y ++ G FS   ++  +L++ YAKCG    A M+FD +  K++++W+ MI GYG+ G G
Sbjct: 534 GYIMRNGYFSDR-HVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFG 593

Query: 543 SGSLAIFSDMLKEDLKPNEIIFTTVLSACSYSGMVEEGWRYFKSMSEDYNFAPSMKHYAC 602
             ++A+F+ M +  ++ +EI F ++L ACS+SG+V+EGWR+F  M  +    P+++HYAC
Sbjct: 594 KEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYAC 653

Query: 603 MVDLLARSGRLDEALDFIKKMPIQPNISLYGAFLHGCGLYSRFDLGEMAVKEMLQLHPNE 662
           +VD+LAR+G L +A  FI+ MPI P+ +++GA L GC ++    L E   +++ +L P  
Sbjct: 654 IVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPEN 713

Query: 663 ACYYVLLSNLYASDGRWGQVNEIRQLMLQRGLNKVPGCSSIEKTG 700
             YYVL++N+YA   +W QV  +R+ + QRGL K PGCS IE  G
Sbjct: 714 TGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKG 746

The following BLAST results are available for this feature:

BLAST of Sed0027922 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022997487.1	0.0e+00	85.71	pentatricopeptide repeat-containing protein At2g03380, mitochondrial [Cucurbita ...	[more]
KAG7032406.1	0.0e+00	85.16	Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a...	[more]
XP_038893238.1	0.0e+00	85.71	pentatricopeptide repeat-containing protein At2g03380, mitochondrial [Benincasa ...	[more]
XP_022957571.1	0.0e+00	85.31	pentatricopeptide repeat-containing protein At2g03380, mitochondrial [Cucurbita ...	[more]
KAG6601646.1	0.0e+00	84.88	Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a...	[more]

BLAST of Sed0027922 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZQ74	3.2e-218	56.66	Pentatricopeptide repeat-containing protein At2g03380, mitochondrial OS=Arabidop...	[more]
Q3E6Q1	2.0e-124	36.39	Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidop...	[more]
O81767	8.8e-120	36.65	Pentatricopeptide repeat-containing protein At4g33990 OS=Arabidopsis thaliana OX...	[more]
Q9C507	6.6e-115	33.23	Putative pentatricopeptide repeat-containing protein At1g69350, mitochondrial OS...	[more]
Q9SN39	6.6e-115	35.35	Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis t...	[more]

BLAST of Sed0027922 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KBI2	0.0e+00	85.71	pentatricopeptide repeat-containing protein At2g03380, mitochondrial OS=Cucurbit...	[more]
A0A6J1GZK8	0.0e+00	85.31	pentatricopeptide repeat-containing protein At2g03380, mitochondrial OS=Cucurbit...	[more]
A0A1S4E1F1	0.0e+00	84.29	pentatricopeptide repeat-containing protein At2g03380, mitochondrial OS=Cucumis ...	[more]
A0A5D3DQT2	0.0e+00	84.63	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A6J1DCB9	0.0e+00	84.71	pentatricopeptide repeat-containing protein At2g03380, mitochondrial isoform X2 ...	[more]

BLAST of Sed0027922 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G03380.1	2.2e-219	56.66	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT1G11290.1	1.4e-125	36.39	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT4G33990.1	6.3e-121	36.65	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G69350.1	4.7e-116	33.23	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT4G18750.1	4.7e-116	35.35	Pentatricopeptide repeat (PPR) superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 567..693 e-value: 1.6E-18 score: 68.7 coord: 376..468 e-value: 3.0E-18 score: 67.8 coord: 268..373 e-value: 6.4E-16 score: 60.2 coord: 469..566 e-value: 3.3E-20 score: 74.2
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 128..267 e-value: 4.4E-21 score: 77.6
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 389..409 e-value: 0.37 score: 11.1 coord: 555..581 e-value: 0.0078 score: 16.4 coord: 417..444 e-value: 1.7E-8 score: 34.1 coord: 289..309 e-value: 1.2 score: 9.5 coord: 317..339 e-value: 2.5E-4 score: 21.1 coord: 491..518 e-value: 0.056 score: 13.7 coord: 519..548 e-value: 5.6E-4 score: 20.0 coord: 592..615 e-value: 0.0083 score: 16.3
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 555..588 e-value: 7.9E-5 score: 20.6 coord: 417..451 e-value: 6.4E-6 score: 24.0 coord: 216..243 e-value: 0.0013 score: 16.8 coord: 317..342 e-value: 0.0013 score: 16.7 coord: 519..553 e-value: 1.9E-5 score: 22.5 coord: 592..615 e-value: 0.0023 score: 16.0
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 213..261 e-value: 3.8E-8 score: 33.4
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 517..551 score: 10.281757
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 315..349 score: 10.248873
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 214..248 score: 9.569272
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 415..449 score: 12.298636
None	No IPR available	PANTHER	PTHR24015	OS07G0578800 PROTEIN-RELATED	coord: 62..701
None	No IPR available	PANTHER	PTHR24015:SF1951	PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN MITOCHONDRIAL	coord: 62..701

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0027922.1	Sed0027922.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009451	RNA modification
cellular_component	GO:0043231	intracellular membrane-bounded organelle
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003723	RNA binding