Sed0027829 (gene) Chayote v1

Overview


Name	Sed0027829
Type	gene
Organism	Sechium edule (Chayote v1)
Description	protein ABA DEFICIENT 4, chloroplastic
Location	LG05: 38076049 .. 38080985 (-)
RNA-Seq Expression	Sed0027829
Synteny	Sed0027829

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTGTTCATGACAATAAAGTTGGAGGTTTGACCTCCTATGTGTGGTTTGAAATGGAGAGAAAAAAAAAGTACATAAAATAGGTATAGGAAAAAGTAGGTAAAATAAAACAAAAGAAATACTGAAATTGAGATGGGAGTAGTGCGCTAAGCGAAGAGATTGTGGAATTTGAGAGGTGGCATCAAAGCCATCAACATAAAGTAGAAGAATTGGAAAGCACAGCAATGGAAATGGATAAGCATTTAGGAACACAACTCCACCAAATATCAAATTCCACTTTCAGATTCAGATTGCAAAACCCATCTTCAATCTTGTCTCCTTGTATTTCCTAAGTGGGAAACTTGTACGATTCCTTTTCCTATCATCAAAACTTACTGTTGTTGGATTCAACCCTTTTTGAGTTTTCCCTTTTTCTTTTAATAACTCACTAACTTTCTGGGTCTGATGAAGAAGACGCCATTGTTGTTCTGTTTCATCTTGCATTTCTCCTCTGGCTATGGGGTTCTCTCCTTCTTCTTCTTGTCTTGCCACTTCCCCTTCCTCACTCAAGGTGCGTTTTTTTCTTCATTCTTCCTATTTGTTGTGTTTCTGTGGTGCTGTTTTTGGGAATGCTTTGATGGGTTGGAAATCGTTTTGGTTGTTTTGTCATTTAATTGTCTGGTTTGTCTCAGATCTGTGAAGGGTTTCTTCCTTCGTGAGTCTTAATCTAATTATGATTGTGAGCCCAGTTGTCTTTTGCTTAATTAATTGGGATTTTCATGTTGGCTTGTGAATCAGGGAGATAGAGACAGGCTTGATGTTATAGTGTGTGATTGGTTTTCATTCTTTGTTTAGCAGCCATTTGCTCACCATATTTTTCCCCTTTACTTTTTTCTTGTTTAGTAGTTGGGGTTATTTGCAGATACTTGTTTTGGGGAAGGGAACTTTGTTTTCATGAATTTTGACTCTTTGACTATAACCATTGTTGTGTGAGGGTTTAACCCAACGAGTGGTCTGGTTGGTAGAGGCTTGAGGTCTCCCAGGTATGTCTTTTTGGGAGTCTCACGCTCAAAACTCACGACCTAGTGAGCTTAATTCGAAAATTCCTTGCTGTCTCTTAAGTCCGGGTCTTGGGACGGATGTGAATGCTCGAGGGGTGAGGCTCTAATTCTTGGTTATAAAAGAAAAAAAAACATCATTGTGTGAGATCCCCAAAAGAAGTGGGACACTAGCTCTTGGATTGGATTATCTCTTACTTTTTGTTTTTTTTTTTTGAATAAGTGGACTATCTCTTACTTGGTATTGCTCAAAAATCGAGTTTCTTCTCTCACAATTTCTATTGGTTAAATTTCAAATTTCGTCCTGAACTTTGAGTTTGGTGTATATCAAATTTAGTCATGAATTTCAAAGAAGCTTTGTTACATTCTAAATCTCTTGATTGTGTTTTTGCTGAGTCCTTGTTCATAAAACCAATAATGAAATGTTGATGCTACATGTTTATTGGATAAATTTTGACTGAGTTGGCATGGCATGCTGGACTGCTAGATGTAATGAACGTGTCAGGCTGTTATTTCATAAATGGTGGTGAGGGCTGGAGCTAATTAGCTTCGCAGAATATGCCAAAAGTTCACATTTCATCAGCTTTAGGGGTCACCTTCAACTTTTATTTTACTAATATAACAATGGTTAAAATTGTATTTGGTTGAATGAATTGGTGCTTCTATTGATGCTTTTGCTCACTTTCAACTTGCACATTTGTCTTTTGGATGGTCTTTGCCACTGGCCCTGTGCGGAAATATTTGAGTACCACATTCTCTTCTGTGTAAAATGTTTCTGTGACAATTTTACTGTTTACTTATCTTAAGTTGCATTGGGAACACCTCTGTGACCCTACCATCCTCTGCTTGAATTGTTTAATTCTTCTGTTGCATGCTTTAAGATTTGTAGTTTAGTTTCCTCACATATGCAACTGTATTTATTTTATTCTGTTTTCAATTTTTGAAGCTTCCTCATCATGAAAGTTCATTTTTATGTTTTGGAGCAGACTACAAAGCTCTATTGTGATGTCAGACTTGACCAAAGATCCTCTATCTCTACAAGAAATAAGCCAAATATTTTACGCAAACCAGGTTATAGCTTGACTGCAGATGGATCGAGAAACTGGAGTTTCATTACAGGATCAAGAATTTCTATAAAACCAAAACTTGCAATAGTAGATTTGTCCAAGAAGGCTCATGGAGTACATGCCTCGTGTAATGACTTTGCCTTTTTTAACTTTCTAAAATTACTGAATATTTCTAGAATTGAGCAGCTAAAATTATCCCAAAGTGAATGGTTGATGCTTGAATACAGTTTGTTTATACTTCAAATGATTCATGTCCTTATCCAATCGAATAGGGATAATTAACTCTTGAGTTGAATATGGAATTGATTGTGAGTGTTGATTATGGCTTCATTAAAAAACAAGACATACTCATCTTAGAAGTGTATTTGGGAGTGAAGCCTGAGAAAGTTTTGTTGTCAAGGAACACTTATTTTCAAGCTAATATTTATCCCAAAATAACTAGAAAAGTTCTGACATTTGGCCTTGTTACATTATGCTTGTATAATTTTTATGTGTGTTTACAGGGTTGGCAAACGCTCAAATTGCTAGCAATGCTTTTACTCTAGGTACAGTAGCTGTTCTCCCCTTTTACGGCCTCATGGTTCTGGCTCCAAACTCAGAATTGGTATGCCATTAATGTATTTAACGTTTGTCCATATTTTACTCGAGTTTTTGAATTATTGAGGATGCTACATTCAGGCGCAAAATGCATGTACGGTGCCTCGCCTAGGCACACAAGGGGTGCGCCTTGTGGGCTTTTGTTCTTTTATATGTTTTTTTAGGGTTTTGGGTATAAAAACTATTTTTAAAAAAACCAAAATCTCCCTATTGCTTCAATTTCAGGGGCGTTGTCCCTGAGCCCCACAAGGTCACATTGCGCCCTTGAACCCCCAAAGTGCTTTTATTGTATATACATATATTTTTATGCTTTTTTTTATTTAGTGCAATTTAAGTAAAAATGGTCTATGCTTTTGGTGCGCCTTGCACCTTAGGCTCCAGAGGGTTATTGCACTGTAATGTGTCTTGAGCCTTTTAAAACATCGGTTACATTCTAGAGCATGCTCACAATAACTATTCTTACATTTCATTTTTGTTATCCTTTTTTCCTGTAAGCCGTTTTTATTTAATTTCAAGAAATCAAACAGTTGTTCGTTTCTGCAGACTAAGAAGTCTATGCAAAGTAGCATACCATATATAGTGCTTGGGGTTCTATATGCATATCTTCTATATCTTTCTTGGACACCAGAAACCATGCAGCTTATTTTTGCAAGCAAATACTGGCTGCCAGAGGTGAGTTCTCTTTACAATTTGAGAATTTCGACCGTATCGTATAGTTCCATTTCGTGTCTTCTTGTTCGTATAATCTTGAACTCATCGTACTTGGCCCTGTAAATGTTCAGCTGCATGGTATATTAAAGATGTTCTCTAGCGAAATGACATTAGCTTCAGCTTGGATTCACCTGTTGGCTGTTGACCTCTTTGCTGCAAGGTATCTACCGTTCTCTCTTTCTCATTAGCTCATTCATTTAACTGCCCCTACTTATTTCACTTCTATCTCTCACAAATTTGTTTACTAAGTTATACAAAATGTGTACCCGAAGGTCGATGGTTGAGACTTGGGGCCTCCCAGACATGTTTCTTTGGAAGTCTCAAGTTTGAGAGCCACAAATCAGTTTAATTGTAAAATCTCTTGTTGTCTCCCGGTTTGGATTTTGGGACGATTGCAGGTGCCCCCAAGTGTAGTATAGAGGAGTGAAGCTCTGATATCCTGGTCATAAAAAAAATTATAGAAAATGTGTGCCAACAAGAGCTGATGATCGGCATGATGATATGAGAGGTTATGAGTTTGAATCCGTTGAATTCAAATTACAGATAATGTGCCTTAAAGTAATTTTTTAAAAACTACTATTAGAACGCTTTTGTTAGAAAAAAGAAAAGAGAAAGATAGAGAGTAAAATTGAAACTTGTAACGTAATGGTCAAACTTGAAATCAACTGCCACACCTTAGGGCAACTTATATTACTTTTGCAGCTAGTTTTAATTGATTGTTCCGTAACAAATTGAACGATTGAGGCAAGTCATAGAACAAAGGGAGAAAACAATGAATGAAACTAGAGAATTTTTTATAATTTAGTTTAGATTTTTTTGATGCTTCGATTAACGTCTTTGTATTTTCTATTCCAGGCAAGTTTTCCACGACGGACTCGAAAATCAAATAGAGACCCGACATTCGGTTTCTCTCTGCCTCTTCTTCTGCCCCATCGGAGTCCTCATTCATGTTATCACCAAAGCACTAACCACAACAACTGGTCCTGCTAAACATGGTACTTAACAATGCTAGAGTAAATCTTAAGCAATGCTTTATTCTAAATTAGCCAATGTGTCATCAGAATTTGAAAGTTATGGAGTTTTAGCATGTAATAAACTCCCTTATTTCGCCCCTGATGGCTCTAAATGTATGTCTGGGTTCATAACATAGCGTTAAAAGTCGATTAGATCGAAGAAATCGATCTAAATGATGTTTGCATGCAGTTGCAATGCAAGGATGGGTGGCTTTTGGAGTCCAACAAAAGGTCAGCAACCTGAAAAGGACAGCTCTAATGCAAGTCTTTGATACGTTTCTCAGTTTCGTAAAGTTTGATTAGTGTTGGAATAATGCAATCTACTCCCATAAATAAATTTAAATATTAATGAAAGGTATAATTGTCCTGTTCAAAAAAAAAATTCTTCCTCTTTCAACCATATGAGATCTTCATTTCCTTGGATTACTGGGATTGATGGTAATAAGATTTTATGTTACTCTTCTTCAAAACTACTCACTTATATGAAAGTGAGAAATGTATCAAAGACTTCACG

mRNA sequence

CTTGTTCATGACAATAAAGTTGGAGGTTTGACCTCCTATGTGTGGTTTGAAATGGAGAGAAAAAAAAAGTACATAAAATAGGTATAGGAAAAAGTAGGTAAAATAAAACAAAAGAAATACTGAAATTGAGATGGGAGTAGTGCGCTAAGCGAAGAGATTGTGGAATTTGAGAGGTGGCATCAAAGCCATCAACATAAAGTAGAAGAATTGGAAAGCACAGCAATGGAAATGGATAAGCATTTAGGAACACAACTCCACCAAATATCAAATTCCACTTTCAGATTCAGATTGCAAAACCCATCTTCAATCTTGTCTCCTTGTATTTCCTAAGTGGGAAACTTAAGACGCCATTGTTGTTCTGTTTCATCTTGCATTTCTCCTCTGGCTATGGGGTTCTCTCCTTCTTCTTCTTGTCTTGCCACTTCCCCTTCCTCACTCAAGACTACAAAGCTCTATTGTGATGTCAGACTTGACCAAAGATCCTCTATCTCTACAAGAAATAAGCCAAATATTTTACGCAAACCAGGTTATAGCTTGACTGCAGATGGATCGAGAAACTGGAGTTTCATTACAGGATCAAGAATTTCTATAAAACCAAAACTTGCAATAGTAGATTTGTCCAAGAAGGCTCATGGAGTACATGCCTCGTGGTTGGCAAACGCTCAAATTGCTAGCAATGCTTTTACTCTAGGTACAGTAGCTGTTCTCCCCTTTTACGGCCTCATGGTTCTGGCTCCAAACTCAGAATTGACTAAGAAGTCTATGCAAAGTAGCATACCATATATAGTGCTTGGGGTTCTATATGCATATCTTCTATATCTTTCTTGGACACCAGAAACCATGCAGCTTATTTTTGCAAGCAAATACTGGCTGCCAGAGCTGCATGGTATATTAAAGATGTTCTCTAGCGAAATGACATTAGCTTCAGCTTGGATTCACCTGTTGGCTGTTGACCTCTTTGCTGCAAGGCAAGTTTTCCACGACGGACTCGAAAATCAAATAGAGACCCGACATTCGGTTTCTCTCTGCCTCTTCTTCTGCCCCATCGGAGTCCTCATTCATGTTATCACCAAAGCACTAACCACAACAACTGGTCCTGCTAAACATGTTGCAATGCAAGGATGGGTGGCTTTTGGAGTCCAACAAAAGGTCAGCAACCTGAAAAGGACAGCTCTAATGCAAGTCTTTGATACGTTTCTCAGTTTCGTAAAGTTTGATTAGTGTTGGAATAATGCAATCTACTCCCATAAATAAATTTAAATATTAATGAAAGGTATAATTGTCCTGTTCAAAAAAAAAATTCTTCCTCTTTCAACCATATGAGATCTTCATTTCCTTGGATTACTGGGATTGATGGTAATAAGATTTTATGTTACTCTTCTTCAAAACTACTCACTTATATGAAAGTGAGAAATGTATCAAAGACTTCACG

Coding sequence (CDS)

ATGGGGTTCTCTCCTTCTTCTTCTTGTCTTGCCACTTCCCCTTCCTCACTCAAGACTACAAAGCTCTATTGTGATGTCAGACTTGACCAAAGATCCTCTATCTCTACAAGAAATAAGCCAAATATTTTACGCAAACCAGGTTATAGCTTGACTGCAGATGGATCGAGAAACTGGAGTTTCATTACAGGATCAAGAATTTCTATAAAACCAAAACTTGCAATAGTAGATTTGTCCAAGAAGGCTCATGGAGTACATGCCTCGTGGTTGGCAAACGCTCAAATTGCTAGCAATGCTTTTACTCTAGGTACAGTAGCTGTTCTCCCCTTTTACGGCCTCATGGTTCTGGCTCCAAACTCAGAATTGACTAAGAAGTCTATGCAAAGTAGCATACCATATATAGTGCTTGGGGTTCTATATGCATATCTTCTATATCTTTCTTGGACACCAGAAACCATGCAGCTTATTTTTGCAAGCAAATACTGGCTGCCAGAGCTGCATGGTATATTAAAGATGTTCTCTAGCGAAATGACATTAGCTTCAGCTTGGATTCACCTGTTGGCTGTTGACCTCTTTGCTGCAAGGCAAGTTTTCCACGACGGACTCGAAAATCAAATAGAGACCCGACATTCGGTTTCTCTCTGCCTCTTCTTCTGCCCCATCGGAGTCCTCATTCATGTTATCACCAAAGCACTAACCACAACAACTGGTCCTGCTAAACATGTTGCAATGCAAGGATGGGTGGCTTTTGGAGTCCAACAAAAGGTCAGCAACCTGAAAAGGACAGCTCTAATGCAAGTCTTTGATACGTTTCTCAGTTTCGTAAAGTTTGATTAG

Protein sequence

MGFSPSSSCLATSPSSLKTTKLYCDVRLDQRSSISTRNKPNILRKPGYSLTADGSRNWSFITGSRISIKPKLAIVDLSKKAHGVHASWLANAQIASNAFTLGTVAVLPFYGLMVLAPNSELTKKSMQSSIPYIVLGVLYAYLLYLSWTPETMQLIFASKYWLPELHGILKMFSSEMTLASAWIHLLAVDLFAARQVFHDGLENQIETRHSVSLCLFFCPIGVLIHVITKALTTTTGPAKHVAMQGWVAFGVQQKVSNLKRTALMQVFDTFLSFVKFD

Homology

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BLAST of Sed0027829 vs. NCBI nr
Match: XP_022148183.1 (protein ABA DEFICIENT 4, chloroplastic [Momordica charantia] >XP_022148184.1 protein ABA DEFICIENT 4, chloroplastic [Momordica charantia])

HSP 1 Score: 393.3 bits (1009), Expect = 1.8e-105
Identity = 206/242 (85.12%), Postives = 218/242 (90.08%), Query Frame = 0


Query: 1   MGFSPSSSCLATSPSSLKTTKLYCDVRLDQRSSISTR-NKPNILRKPGYSLTAD-GSRNW 60
           MGFSPSSSCLA SP S+K TK  CDVR+ QRSSISTR +KPN+       LTAD  SR W
Sbjct: 1   MGFSPSSSCLANSPLSIKITKPCCDVRIGQRSSISTRSHKPNLSVN---GLTADVSSRKW 60

Query: 61  SFITGSRISIKPKLAIVDLSKKAHGVHASWLANAQIASNAFTLGTVAVLPFYGLMVLAPN 120
           SFITGSRI +KPKLA VDLSKKAHGVHASWLANAQIASNAFTLGTVAVLPFYGLMVLAP 
Sbjct: 61  SFITGSRILLKPKLAGVDLSKKAHGVHASWLANAQIASNAFTLGTVAVLPFYGLMVLAPK 120

Query: 121 SELTKKSMQSSIPYIVLGVLYAYLLYLSWTPETMQLIFASKYWLPELHGILKMFSSEMTL 180
           SELTK+SMQS+IPY+VLG+LYAYLLYLSWTPET+QLIFASKYWLPEL G+ KMFSSEMTL
Sbjct: 121 SELTKRSMQSNIPYVVLGLLYAYLLYLSWTPETVQLIFASKYWLPELPGMSKMFSSEMTL 180

Query: 181 ASAWIHLLAVDLFAARQVFHDGLENQIETRHSVSLCLFFCPIGVLIHVITKALTTTTGPA 240
           ASAWIHLL VDLFAARQVFHDGLENQIETRHSVSLCLFFCPIGVLIHVITKALTT +GPA
Sbjct: 181 ASAWIHLLVVDLFAARQVFHDGLENQIETRHSVSLCLFFCPIGVLIHVITKALTTRSGPA 239

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BLAST of Sed0027829 vs. NCBI nr
Match: XP_008461596.1 (PREDICTED: protein ABA DEFICIENT 4, chloroplastic isoform X2 [Cucumis melo] >XP_008461597.1 PREDICTED: protein ABA DEFICIENT 4, chloroplastic isoform X2 [Cucumis melo])

HSP 1 Score: 388.7 bits (997), Expect = 4.3e-104
Identity = 199/241 (82.57%), Postives = 214/241 (88.80%), Query Frame = 0


Query: 1   MGFSPSSSCLATSPSSLKTTKLYCDVRLDQRSSISTR-NKPNILRKPGYSLTADGSRNWS 60
           MGFS SSSCL TS  S+K TK  CDVRL QRSSI TR +K N+L +P + LTAD SRNWS
Sbjct: 1   MGFSLSSSCLGTSSLSIKITKPCCDVRLGQRSSIFTRSHKLNLLGQPVHGLTADASRNWS 60

Query: 61  FITGSRISIKPKLAIVDLSKKAHGVHASWLANAQIASNAFTLGTVAVLPFYGLMVLAPNS 120
           FITGSRI+IKPKL+ VD SK   GV ASWLANAQ+ASNAFTLGT+AVLPFYGLMVLAP S
Sbjct: 61  FITGSRIAIKPKLSKVDFSKNVQGVRASWLANAQVASNAFTLGTIAVLPFYGLMVLAPKS 120

Query: 121 ELTKKSMQSSIPYIVLGVLYAYLLYLSWTPETMQLIFASKYWLPELHGILKMFSSEMTLA 180
           ELTK+SMQS+IPY+VLG+LYAYLLYLSWTPETMQLIFASKYWLPEL GILKMFSSEMTLA
Sbjct: 121 ELTKRSMQSNIPYVVLGLLYAYLLYLSWTPETMQLIFASKYWLPELPGILKMFSSEMTLA 180

Query: 181 SAWIHLLAVDLFAARQVFHDGLENQIETRHSVSLCLFFCPIGVLIHVITKALTTTTGPAK 240
           SAWIHLL VDLFAARQVFHDG+EN+IETRHSVSLCLFFCPIGVLIHVITKALT   GPAK
Sbjct: 181 SAWIHLLVVDLFAARQVFHDGVENKIETRHSVSLCLFFCPIGVLIHVITKALTNRVGPAK 240

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BLAST of Sed0027829 vs. NCBI nr
Match: XP_038887190.1 (protein ABA DEFICIENT 4, chloroplastic [Benincasa hispida])

HSP 1 Score: 387.9 bits (995), Expect = 7.4e-104
Identity = 198/243 (81.48%), Postives = 214/243 (88.07%), Query Frame = 0


Query: 1   MGF--SPSSSCLATSPSSLKTTKLYCDVRLDQRSSISTR-NKPNILRKPGYSLTADGSRN 60
           MGF  S SSSC  TS  S+K TK YCDVRL  RS I+TR +KPN+L +P + LT D S+N
Sbjct: 1   MGFSLSSSSSCFPTSSLSIKITKPYCDVRLSHRSFITTRSHKPNLLGQPVHGLTTDASKN 60

Query: 61  WSFITGSRISIKPKLAIVDLSKKAHGVHASWLANAQIASNAFTLGTVAVLPFYGLMVLAP 120
           WSFITGSRI+ KPKLA +DLSK   GVHASWLANAQ+ASNAFTLGT+AVLPFYGLMVLAP
Sbjct: 61  WSFITGSRIATKPKLARLDLSKNIRGVHASWLANAQVASNAFTLGTIAVLPFYGLMVLAP 120

Query: 121 NSELTKKSMQSSIPYIVLGVLYAYLLYLSWTPETMQLIFASKYWLPELHGILKMFSSEMT 180
            SELTK+SMQS+IPY+VLG+LYAYLLYLSWTPETMQLIFASKYWLPEL GILKMFSSEMT
Sbjct: 121 KSELTKRSMQSNIPYVVLGLLYAYLLYLSWTPETMQLIFASKYWLPELPGILKMFSSEMT 180

Query: 181 LASAWIHLLAVDLFAARQVFHDGLENQIETRHSVSLCLFFCPIGVLIHVITKALTTTTGP 240
           LASAWIHLL VDLFAARQVFHDG+ENQIETRHSVSLCLFFCPIGVLIHVITKALT   GP
Sbjct: 181 LASAWIHLLVVDLFAARQVFHDGVENQIETRHSVSLCLFFCPIGVLIHVITKALTNRDGP 240

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BLAST of Sed0027829 vs. NCBI nr
Match: XP_022983661.1 (protein ABA DEFICIENT 4, chloroplastic [Cucurbita maxima] >XP_022983662.1 protein ABA DEFICIENT 4, chloroplastic [Cucurbita maxima])

HSP 1 Score: 387.1 bits (993), Expect = 1.3e-103
Identity = 200/242 (82.64%), Postives = 217/242 (89.67%), Query Frame = 0


Query: 1   MGFSPSSSCLATSPSSLKTTKLYCDVRLDQRSSISTRN-KPNILRKPGYSLTADGSRNWS 60
           MGFS  SSCL + P S+K TK  CDVRL QRSSISTR+ +P++L    + LTAD SRNWS
Sbjct: 1   MGFSLYSSCLPSFPLSIKITKPCCDVRLGQRSSISTRSYRPDLLGLSVHDLTADVSRNWS 60

Query: 61  FITGSRISIKPKLAIVDLSKKAH-GVHASWLANAQIASNAFTLGTVAVLPFYGLMVLAPN 120
           FITGSRI+IKPKLA VDLSKK H GVHASWLANAQ+ASNAFTLGT+AVLPFYGLMVLAP 
Sbjct: 61  FITGSRIAIKPKLARVDLSKKVHGGVHASWLANAQVASNAFTLGTIAVLPFYGLMVLAPK 120

Query: 121 SELTKKSMQSSIPYIVLGVLYAYLLYLSWTPETMQLIFASKYWLPELHGILKMFSSEMTL 180
           SELT++SMQS+IPY+VLG+LYAYLLYLSWTPET+QLIFASKYWLPEL GILKMFSSEMTL
Sbjct: 121 SELTRRSMQSNIPYVVLGLLYAYLLYLSWTPETVQLIFASKYWLPELSGILKMFSSEMTL 180

Query: 181 ASAWIHLLAVDLFAARQVFHDGLENQIETRHSVSLCLFFCPIGVLIHVITKALTTTTGPA 240
           ASAWIHLL VDLFAARQVFHDG+ENQIETRHSVSLCLFFCPIGVLIHVITKALT   GPA
Sbjct: 181 ASAWIHLLVVDLFAARQVFHDGVENQIETRHSVSLCLFFCPIGVLIHVITKALTHRDGPA 240

[Close]

BLAST of Sed0027829 vs. NCBI nr
Match: XP_004145860.1 (protein ABA DEFICIENT 4, chloroplastic isoform X1 [Cucumis sativus] >XP_031738357.1 protein ABA DEFICIENT 4, chloroplastic isoform X1 [Cucumis sativus] >KAE8650580.1 hypothetical protein Csa_011694 [Cucumis sativus])

HSP 1 Score: 382.9 bits (982), Expect = 2.4e-102
Identity = 195/241 (80.91%), Postives = 213/241 (88.38%), Query Frame = 0


Query: 1   MGFSPSSSCLATSPSSLKTTKLYCDVRLDQRSSISTR-NKPNILRKPGYSLTADGSRNWS 60
           MGFS SSSCLATS  S+K +K  CDVRL  RSS+ TR +K N+L +P +  TAD SRNWS
Sbjct: 1   MGFSLSSSCLATSSLSIKISKPCCDVRLGLRSSVFTRSHKTNLLGQPVHGFTADASRNWS 60

Query: 61  FITGSRISIKPKLAIVDLSKKAHGVHASWLANAQIASNAFTLGTVAVLPFYGLMVLAPNS 120
           FITGSRI+IKPKL+ V+ SK   GV ASWLANAQ+ASNAFTLGT+AVLPFYGLMVLAP S
Sbjct: 61  FITGSRIAIKPKLSRVNFSKNVQGVRASWLANAQVASNAFTLGTIAVLPFYGLMVLAPKS 120

Query: 121 ELTKKSMQSSIPYIVLGVLYAYLLYLSWTPETMQLIFASKYWLPELHGILKMFSSEMTLA 180
           ELTK+SMQS+IPY+VLG+LYAYLLYLSWTPETMQLIFASKYWLPEL GILKMFSSEMTLA
Sbjct: 121 ELTKRSMQSNIPYVVLGLLYAYLLYLSWTPETMQLIFASKYWLPELPGILKMFSSEMTLA 180

Query: 181 SAWIHLLAVDLFAARQVFHDGLENQIETRHSVSLCLFFCPIGVLIHVITKALTTTTGPAK 240
           SAWIHLL VDLFAARQVFHDG+EN+IETRHSVSLCLFFCPIGVLIHVITKALT   GPAK
Sbjct: 181 SAWIHLLVVDLFAARQVFHDGVENKIETRHSVSLCLFFCPIGVLIHVITKALTNRVGPAK 240

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BLAST of Sed0027829 vs. ExPASy Swiss-Prot
Match: Q8LFP9 (Protein ABA DEFICIENT 4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ABA4 PE=2 SV=1)

HSP 1 Score: 250.8 bits (639), Expect = 1.9e-65
Identity = 122/174 (70.11%), Postives = 145/174 (83.33%), Query Frame = 0


Query: 58  WSFITGSRISIKPKLAIVDLSKKAHGVHASWLANAQIASNAFTLGTVAVLPFYGLMVLAP 117
           WSFI GSRIS++     V + KK  GV ASWL   QIAS+ F +GT AVLPFY LMV+AP
Sbjct: 42  WSFIGGSRISVQSNSYTV-VHKKFSGVRASWLTTTQIASSVFAVGTTAVLPFYTLMVVAP 101

Query: 118 NSELTKKSMQSSIPYIVLGVLYAYLLYLSWTPETMQLIFASKYWLPELHGILKMFSSEMT 177
            +E+TKK M+SS+PYI+LGVLY YLLY+SWTPET++ +F+SKY LPEL GI KMFSSEMT
Sbjct: 102 KAEITKKCMESSVPYIILGVLYVYLLYISWTPETLKYMFSSKYMLPELSGIAKMFSSEMT 161

Query: 178 LASAWIHLLAVDLFAARQVFHDGLENQIETRHSVSLCLFFCPIGVLIHVITKAL 232
           LASAWIHLL VDLFAARQV++DGLENQIETRHSVSLCL FCP+G++ H +TKA+
Sbjct: 162 LASAWIHLLVVDLFAARQVYNDGLENQIETRHSVSLCLLFCPVGIVSHFVTKAI 214

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BLAST of Sed0027829 vs. ExPASy Swiss-Prot
Match: Q5ZEG0 (Protein MAO HUZI 4, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=MHZ4 PE=2 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 3.1e-60
Identity = 106/150 (70.67%), Postives = 135/150 (90.00%), Query Frame = 0


Query: 87  SWLANAQIASNAFTLGTVAVLPFYGLMVLAPNSELTKKSMQSSIPYIVLGVLYAYLLYLS 146
           +W+A++QIAS+AFT GT+AVLPFY LMV+APN+++TK+++ SS PY+ LG+LYAYLLYLS
Sbjct: 76  AWMASSQIASSAFTWGTIAVLPFYTLMVVAPNADVTKRAVDSSAPYVALGILYAYLLYLS 135

Query: 147 WTPETMQLIFASKYWLPELHGILKMFSSEMTLASAWIHLLAVDLFAARQVFHDGLENQIE 206
           WTP+T++ +FASKYWLPEL GI++MF+SEMT+ASAWIHLLAVDLFAARQV+HDG++N IE
Sbjct: 136 WTPDTLRAMFASKYWLPELTGIVRMFASEMTVASAWIHLLAVDLFAARQVYHDGIKNNIE 195

Query: 207 TRHSVSLCLFFCPIGVLIHVITKALTTTTG 237
           TRHSVSLCL FCPIG+  HV+TK L  + G
Sbjct: 196 TRHSVSLCLLFCPIGIATHVLTKVLAGSIG 225

[Close]

BLAST of Sed0027829 vs. ExPASy TrEMBL
Match: A0A6J1D387 (protein ABA DEFICIENT 4, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111016919 PE=4 SV=1)

HSP 1 Score: 393.3 bits (1009), Expect = 8.5e-106
Identity = 206/242 (85.12%), Postives = 218/242 (90.08%), Query Frame = 0


Query: 1   MGFSPSSSCLATSPSSLKTTKLYCDVRLDQRSSISTR-NKPNILRKPGYSLTAD-GSRNW 60
           MGFSPSSSCLA SP S+K TK  CDVR+ QRSSISTR +KPN+       LTAD  SR W
Sbjct: 1   MGFSPSSSCLANSPLSIKITKPCCDVRIGQRSSISTRSHKPNLSVN---GLTADVSSRKW 60

Query: 61  SFITGSRISIKPKLAIVDLSKKAHGVHASWLANAQIASNAFTLGTVAVLPFYGLMVLAPN 120
           SFITGSRI +KPKLA VDLSKKAHGVHASWLANAQIASNAFTLGTVAVLPFYGLMVLAP 
Sbjct: 61  SFITGSRILLKPKLAGVDLSKKAHGVHASWLANAQIASNAFTLGTVAVLPFYGLMVLAPK 120

Query: 121 SELTKKSMQSSIPYIVLGVLYAYLLYLSWTPETMQLIFASKYWLPELHGILKMFSSEMTL 180
           SELTK+SMQS+IPY+VLG+LYAYLLYLSWTPET+QLIFASKYWLPEL G+ KMFSSEMTL
Sbjct: 121 SELTKRSMQSNIPYVVLGLLYAYLLYLSWTPETVQLIFASKYWLPELPGMSKMFSSEMTL 180

Query: 181 ASAWIHLLAVDLFAARQVFHDGLENQIETRHSVSLCLFFCPIGVLIHVITKALTTTTGPA 240
           ASAWIHLL VDLFAARQVFHDGLENQIETRHSVSLCLFFCPIGVLIHVITKALTT +GPA
Sbjct: 181 ASAWIHLLVVDLFAARQVFHDGLENQIETRHSVSLCLFFCPIGVLIHVITKALTTRSGPA 239

[Close]

BLAST of Sed0027829 vs. ExPASy TrEMBL
Match: A0A1S3CFJ8 (protein ABA DEFICIENT 4, chloroplastic isoform X2 OS=Cucumis melo OX=3656 GN=LOC103500161 PE=4 SV=1)

HSP 1 Score: 388.7 bits (997), Expect = 2.1e-104
Identity = 199/241 (82.57%), Postives = 214/241 (88.80%), Query Frame = 0


Query: 1   MGFSPSSSCLATSPSSLKTTKLYCDVRLDQRSSISTR-NKPNILRKPGYSLTADGSRNWS 60
           MGFS SSSCL TS  S+K TK  CDVRL QRSSI TR +K N+L +P + LTAD SRNWS
Sbjct: 1   MGFSLSSSCLGTSSLSIKITKPCCDVRLGQRSSIFTRSHKLNLLGQPVHGLTADASRNWS 60

Query: 61  FITGSRISIKPKLAIVDLSKKAHGVHASWLANAQIASNAFTLGTVAVLPFYGLMVLAPNS 120
           FITGSRI+IKPKL+ VD SK   GV ASWLANAQ+ASNAFTLGT+AVLPFYGLMVLAP S
Sbjct: 61  FITGSRIAIKPKLSKVDFSKNVQGVRASWLANAQVASNAFTLGTIAVLPFYGLMVLAPKS 120

Query: 121 ELTKKSMQSSIPYIVLGVLYAYLLYLSWTPETMQLIFASKYWLPELHGILKMFSSEMTLA 180
           ELTK+SMQS+IPY+VLG+LYAYLLYLSWTPETMQLIFASKYWLPEL GILKMFSSEMTLA
Sbjct: 121 ELTKRSMQSNIPYVVLGLLYAYLLYLSWTPETMQLIFASKYWLPELPGILKMFSSEMTLA 180

Query: 181 SAWIHLLAVDLFAARQVFHDGLENQIETRHSVSLCLFFCPIGVLIHVITKALTTTTGPAK 240
           SAWIHLL VDLFAARQVFHDG+EN+IETRHSVSLCLFFCPIGVLIHVITKALT   GPAK
Sbjct: 181 SAWIHLLVVDLFAARQVFHDGVENKIETRHSVSLCLFFCPIGVLIHVITKALTNRVGPAK 240

[Close]

BLAST of Sed0027829 vs. ExPASy TrEMBL
Match: A0A6J1IZZ7 (protein ABA DEFICIENT 4, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111482208 PE=4 SV=1)

HSP 1 Score: 387.1 bits (993), Expect = 6.1e-104
Identity = 200/242 (82.64%), Postives = 217/242 (89.67%), Query Frame = 0


Query: 1   MGFSPSSSCLATSPSSLKTTKLYCDVRLDQRSSISTRN-KPNILRKPGYSLTADGSRNWS 60
           MGFS  SSCL + P S+K TK  CDVRL QRSSISTR+ +P++L    + LTAD SRNWS
Sbjct: 1   MGFSLYSSCLPSFPLSIKITKPCCDVRLGQRSSISTRSYRPDLLGLSVHDLTADVSRNWS 60

Query: 61  FITGSRISIKPKLAIVDLSKKAH-GVHASWLANAQIASNAFTLGTVAVLPFYGLMVLAPN 120
           FITGSRI+IKPKLA VDLSKK H GVHASWLANAQ+ASNAFTLGT+AVLPFYGLMVLAP 
Sbjct: 61  FITGSRIAIKPKLARVDLSKKVHGGVHASWLANAQVASNAFTLGTIAVLPFYGLMVLAPK 120

Query: 121 SELTKKSMQSSIPYIVLGVLYAYLLYLSWTPETMQLIFASKYWLPELHGILKMFSSEMTL 180
           SELT++SMQS+IPY+VLG+LYAYLLYLSWTPET+QLIFASKYWLPEL GILKMFSSEMTL
Sbjct: 121 SELTRRSMQSNIPYVVLGLLYAYLLYLSWTPETVQLIFASKYWLPELSGILKMFSSEMTL 180

Query: 181 ASAWIHLLAVDLFAARQVFHDGLENQIETRHSVSLCLFFCPIGVLIHVITKALTTTTGPA 240
           ASAWIHLL VDLFAARQVFHDG+ENQIETRHSVSLCLFFCPIGVLIHVITKALT   GPA
Sbjct: 181 ASAWIHLLVVDLFAARQVFHDGVENQIETRHSVSLCLFFCPIGVLIHVITKALTHRDGPA 240

[Close]

BLAST of Sed0027829 vs. ExPASy TrEMBL
Match: A0A0A0LCH1 (FHA domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G280950 PE=4 SV=1)

HSP 1 Score: 383.3 bits (983), Expect = 8.8e-103
Identity = 196/245 (80.00%), Postives = 214/245 (87.35%), Query Frame = 0


Query: 1   MGFSPSSSCLATSPSSLKTTKLYCDVRLDQRSSISTR-NKPNILRKPGYSLTADGSRNWS 60
           MGFS SSSCLATS  S+K +K  CDVRL  RSS+ TR +K N+L +P +  TAD SRNWS
Sbjct: 1   MGFSLSSSCLATSSLSIKISKPCCDVRLGLRSSVFTRSHKTNLLGQPVHGFTADASRNWS 60

Query: 61  FITGSRISIKPKLAIVDLSKKAHGVHASWLANAQIASNAFTLGTVAVLPFYGLMVLAPNS 120
           FITGSRI+IKPKL+ V+ SK   GV ASWLANAQ+ASNAFTLGT+AVLPFYGLMVLAP S
Sbjct: 61  FITGSRIAIKPKLSRVNFSKNVQGVRASWLANAQVASNAFTLGTIAVLPFYGLMVLAPKS 120

Query: 121 ELTKKSMQSSIPYIVLGVLYAYLLYLSWTPETMQLIFASKYWLPELHGILKMFSSEMTLA 180
           ELTK+SMQS+IPY+VLG+LYAYLLYLSWTPETMQLIFASKYWLPEL GILKMFSSEMTLA
Sbjct: 121 ELTKRSMQSNIPYVVLGLLYAYLLYLSWTPETMQLIFASKYWLPELPGILKMFSSEMTLA 180

Query: 181 SAWIHLLAVDLFAARQVFHDGLENQIETRHSVSLCLFFCPIGVLIHVITKALTTTTGPAK 240
           SAWIHLL VDLFAARQVFHDG+EN+IETRHSVSLCLFFCPIGVLIHVITKALT   GPAK
Sbjct: 181 SAWIHLLVVDLFAARQVFHDGVENKIETRHSVSLCLFFCPIGVLIHVITKALTNRVGPAK 240

Query: 241 HVAMQ 245
           H   Q
Sbjct: 241 HAPNQ 245

[Close]

BLAST of Sed0027829 vs. ExPASy TrEMBL
Match: A0A6J1F3F1 (protein ABA DEFICIENT 4, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111442024 PE=4 SV=1)

HSP 1 Score: 380.2 bits (975), Expect = 7.5e-102
Identity = 198/242 (81.82%), Postives = 214/242 (88.43%), Query Frame = 0


Query: 1   MGFSPSSSCLATSPSSLKTTKLYCDVRLDQRSSISTRN-KPNILRKPGYSLTADGSRNWS 60
           M FS  SSCL + P S+K TK  CDVRL QRSSISTR+ +P++L    + LTAD S NWS
Sbjct: 1   MAFSLYSSCLPSFPLSIKITKPCCDVRLGQRSSISTRSYRPDLLGLSVHDLTADVSGNWS 60

Query: 61  FITGSRISIKPKLAIVDLSKKAH-GVHASWLANAQIASNAFTLGTVAVLPFYGLMVLAPN 120
           FITGSRI+IKPKLA VDLSKK   GVHASWLANAQ+ASNAFTLGT+AVLPFYGLMVLAP 
Sbjct: 61  FITGSRIAIKPKLARVDLSKKVRGGVHASWLANAQVASNAFTLGTIAVLPFYGLMVLAPK 120

Query: 121 SELTKKSMQSSIPYIVLGVLYAYLLYLSWTPETMQLIFASKYWLPELHGILKMFSSEMTL 180
           SELTK+SMQS+IPY+VLG+LYAYLLYLSWTPET+QLIFASKYWLPEL GILKMFSSEMTL
Sbjct: 121 SELTKRSMQSNIPYVVLGLLYAYLLYLSWTPETVQLIFASKYWLPELSGILKMFSSEMTL 180

Query: 181 ASAWIHLLAVDLFAARQVFHDGLENQIETRHSVSLCLFFCPIGVLIHVITKALTTTTGPA 240
           ASAWIHLL VDLFAARQVFHDG+ENQIETRHSVSLCLFFCPIGVLIHVITKALT   GPA
Sbjct: 181 ASAWIHLLVVDLFAARQVFHDGVENQIETRHSVSLCLFFCPIGVLIHVITKALTHRDGPA 240

[Close]

BLAST of Sed0027829 vs. TAIR 10
Match: AT1G67080.1 (abscisic acid (aba)-deficient 4 )

HSP 1 Score: 250.8 bits (639), Expect = 1.3e-66
Identity = 122/174 (70.11%), Postives = 145/174 (83.33%), Query Frame = 0


Query: 58  WSFITGSRISIKPKLAIVDLSKKAHGVHASWLANAQIASNAFTLGTVAVLPFYGLMVLAP 117
           WSFI GSRIS++     V + KK  GV ASWL   QIAS+ F +GT AVLPFY LMV+AP
Sbjct: 42  WSFIGGSRISVQSNSYTV-VHKKFSGVRASWLTTTQIASSVFAVGTTAVLPFYTLMVVAP 101

Query: 118 NSELTKKSMQSSIPYIVLGVLYAYLLYLSWTPETMQLIFASKYWLPELHGILKMFSSEMT 177
            +E+TKK M+SS+PYI+LGVLY YLLY+SWTPET++ +F+SKY LPEL GI KMFSSEMT
Sbjct: 102 KAEITKKCMESSVPYIILGVLYVYLLYISWTPETLKYMFSSKYMLPELSGIAKMFSSEMT 161

Query: 178 LASAWIHLLAVDLFAARQVFHDGLENQIETRHSVSLCLFFCPIGVLIHVITKAL 232
           LASAWIHLL VDLFAARQV++DGLENQIETRHSVSLCL FCP+G++ H +TKA+
Sbjct: 162 LASAWIHLLVVDLFAARQVYNDGLENQIETRHSVSLCLLFCPVGIVSHFVTKAI 214

The following BLAST results are available for this feature:

BLAST of Sed0027829 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022148183.1	1.8e-105	85.12	protein ABA DEFICIENT 4, chloroplastic [Momordica charantia] >XP_022148184.1 pro...	[more]
XP_008461596.1	4.3e-104	82.57	PREDICTED: protein ABA DEFICIENT 4, chloroplastic isoform X2 [Cucumis melo] >XP_...	[more]
XP_038887190.1	7.4e-104	81.48	protein ABA DEFICIENT 4, chloroplastic [Benincasa hispida]	[more]
XP_022983661.1	1.3e-103	82.64	protein ABA DEFICIENT 4, chloroplastic [Cucurbita maxima] >XP_022983662.1 protei...	[more]
XP_004145860.1	2.4e-102	80.91	protein ABA DEFICIENT 4, chloroplastic isoform X1 [Cucumis sativus] >XP_03173835...	[more]

BLAST of Sed0027829 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LFP9	1.9e-65	70.11	Protein ABA DEFICIENT 4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ABA4 P...	[more]
Q5ZEG0	3.1e-60	70.67	Protein MAO HUZI 4, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=MH...	[more]

BLAST of Sed0027829 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D387	8.5e-106	85.12	protein ABA DEFICIENT 4, chloroplastic OS=Momordica charantia OX=3673 GN=LOC1110...	[more]
A0A1S3CFJ8	2.1e-104	82.57	protein ABA DEFICIENT 4, chloroplastic isoform X2 OS=Cucumis melo OX=3656 GN=LOC...	[more]
A0A6J1IZZ7	6.1e-104	82.64	protein ABA DEFICIENT 4, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC1114822...	[more]
A0A0A0LCH1	8.8e-103	80.00	FHA domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G280950 PE=4 SV...	[more]
A0A6J1F3F1	7.5e-102	81.82	protein ABA DEFICIENT 4, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC11144...	[more]

BLAST of Sed0027829 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G67080.1	1.3e-66	70.11	abscisic acid (aba)-deficient 4	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025461	ABA DEFICIENT 4-like	PFAM	PF14108	DUF4281	coord: 98..225 e-value: 4.9E-37 score: 127.2
None	No IPR available	PANTHER	PTHR34543	PROTEIN ABA DEFICIENT 4, CHLOROPLASTIC	coord: 7..240

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0027829.1	Sed0027829.1	mRNA
Sed0027829.2	Sed0027829.2	mRNA
Sed0027829.3	Sed0027829.3	mRNA
Sed0027829.4	Sed0027829.4	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009688	abscisic acid biosynthetic process
biological_process	GO:0032928	regulation of superoxide anion generation
biological_process	GO:0016122	xanthophyll metabolic process
cellular_component	GO:0016021	integral component of membrane