Sed0027718 (gene) Chayote v1

Overview


Name	Sed0027718
Type	gene
Organism	Sechium edule (Chayote v1)
Description	EKC/KEOPS complex subunit Tprkb
Location	LG13: 3405296 .. 3408272 (+)
RNA-Seq Expression	Sed0027718
Synteny	Sed0027718

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAAAACTCTCAAGAAAGTTATGTAAATTGCAGTTAATAATATTGCAATAAAAACCGGAAAAATCCAAATCCAAAACCCTAACCCCCATCGTAGACCGTAGTCGTCTTCCTCCAATATTCGCGGTTCCGGCGATCTGTGGAAGAATTTCAGAGCCTCCGGTGACCGGAGCAGCCATGAAGGTGATCGAGATCAACGGAACCACCATAACTCTCGCCTTGTTCACAGACGTTACCAATTCCAAGTAATTTTTCTCGCTCTCACTCTATCTGATTTCCTGAAAATGTGAAATTTTGGTTGACAGAGACTAGTGGGAAAATGGTGCATTCTTGTAAAATCATATAGACGCGAAGATTTGATCTCTTTGTTTTTCTTTAGGCGTTTGCTTTCGGTACATGCTCCTTAAGTGTTTGAGAAAATGCTTGAACTAAGTGAGGCAAGAAAATTAGGGGATAACTCGTTGTGATGCATTTAACCGTTGTGTTTTTTTACATTACGTGATTGATTTTATTTGATAAACTTGTTAGTTTTTTATAATTGTGGTGTGGGGTTTCTTCCATTTTTTGAAGTGGGAGAGGTGTTGCTTGAACTTAGTGATTGAACAGTAATGTCTTTGTTTGATTTTTAAAGTCATTTCTGAAAATTATGGTTGATATGAACTCTTCAAATCTTCTGTTCGCATTTGCCAAGATGTTATCGTTTGGTTTCCACTACACCCATAGCGATAGGATAGCTCTTTTCTTTTTGGATGCCCTGATCATCACCTGCGCCACTATGGCCTTTTCCCCTGGGAAGCTTGGGCGAAGTTGTTGAATCCGTGGTAGGGCAAAGAAATACGAATATTTGCCTCTTCGCCGGGATATCACTTCTAGTCACTTATCATCTATGGCATCATATTTAGGATTATTCTCGGCTCTCATCTTCTCTGGAAACATCGACCTTCAAGTCCAACCGAAGCCCATCTTCACATTTCATTACCCTTTTCTCACTGTTTCCATGGATAGGTTCAGGCTTGTTTATACCAGAATAATTCTTAATACTTTGCTCTTTGTTTTTCCAATGTATTTGGTTATTTCTCTCTATTTGATCTATTCCAATGGACATTTTAACAATTTTCTCCCATTAATAAAAATGTTTTCATTTCATGGTGGTTTGAATATGATTTAAGGGTACCATTGTCTATGTTCTTATGTGAATGTGTGTATTATTTATAGAACAAACCATGTCAATGCCACAATTATAGTGTCTGATAAAGTTGTCTATTTCCAGGGAACTTCTTGATTATATGCAAGCTGGAACTCTGGAACCGGAAGTTGCATTTCTCAATGCTTCTCTTGTATGGTTATTTTATTATATATTCTTATCTATTTTTGCATATAACTCATTGCTAGCTGATATGCTTATGAAATCTACCCTAAACCACCCTTTTGTATGTTTTAGCTTTGAATTGGGCCCATGGGTTCTCTAATATTTCCTTTATAAATAACCGAAGACAGATTCCTGATGTTTTCCCGCTACTTGCGGCTGCTTATAAGACACTGATATCCAAGTCAAGGGATTCACTGATTACTCGCACCCTTCATTCAGAACTTGTCTACAATTATTCGGGTTCAAAGCATGTAATTCTGTCTGACTTCTTGGATATTACAGTCTGTTGCTTATTTTTTTGTGGGTATGTACAATTAATTTTGTGATTTGATCATGAACAGATTACAGAGTCTTTGAAAAGATGTGGAATTTCTGAGAGCTCTTCTTATGTCCTTGCGGCTCGTTTTAATGCTTCTCCCGATGAGGTTGGATCAAAATGCCTTGCTACTAATTAGACTCTACCGTATTGTAAACTTTTCATCATATATTCATATTCTGAACTCTTGAAGAACTTAGCCTTTAGTATAATCAATTTTACCTTGCTAGATTAAGGCCATTGAGAAACTAATTCATGGAAGAGAGATCGACCTCGAGGAATTGGGAGAGAGAGCTGATCAAGCTCTAATACAAAAGGTGCAATCTATATCTTTCTTAGTTTGCTAATTATGATTTGTTTTTTTGTTTTATTTCCTTTTGATAACTGAGTATTTAGGGGTGACAAACCCTCATGTTATGCTCTAGGTTCACTTCTAGAGTTCTACTAATTTCTAGAGAGCCTTTTCTCACTCGCCTTAACACGAGTTTTTTATTATGAAGTTTTCTAACCATCCTAGATTAGCCTTAGTAGTTGCCTCAGGCGAAGAAGCGCCATTATTTCCTTCATGAATTAGCGGCATTTTTGCATCCGATGGATTTAGAGGCACAGATTTTGTTGCAGGAATGTGAGTTCCTTTGCCTTCGATCTTCCGCCCGGGCGCAGCTTATTAAAGCCTGCTAAAACTCATCACGAATTGATAGATTAGCCTTAGTAGTCAAATAAGAGCTTGTAAATCATAAAATATCGAAGAGGTTATGAATTCCATCTATGATGATCATCTGTCTAGATGAGGTTGGATCAAGATGGACAACTAGAGGGTGAGTTGGTTGTTTTGTGAGAATAATCGATGTGCCCATAAGCTGGCTCAGACACTCATAGACGTAAAAAAATACTACGAAACTAAGTTTTCTGCTGGATCACCAAATTATGGCTTATCCTTGCCAATAACAAAATCCCTTTTTTTTCCAGCATTTTAAGATCACTGGACCCGAGTTGACAGTATCCTCAGTTGGAGATGCTATAACATGTAGAATCGCTGCTCGGGATGCCTTGTAGATGAAGATTACAGGTTTCATCTTTGGCTGCTGGCCCACAAAGTTACTCCTTTGTAGGTGAACGTATTAAATTGTTTACAATATATTACTCTTAGTTGGCCTAGAGACCGGCGTTGTTATCCTTGTTTAAAAAAAAATAACAAAAGTATGTTACTGTTAGTTTGGTGATGTTTATACAATTTTATAGAATGTTCAAATAATTGTGCTGTGATGTCCGATGGGAATTGACTAATTTACC

mRNA sequence

AAAAAAAACTCTCAAGAAAGTTATGTAAATTGCAGTTAATAATATTGCAATAAAAACCGGAAAAATCCAAATCCAAAACCCTAACCCCCATCGTAGACCGTAGTCGTCTTCCTCCAATATTCGCGGTTCCGGCGATCTGTGGAAGAATTTCAGAGCCTCCGGTGACCGGAGCAGCCATGAAGGTGATCGAGATCAACGGAACCACCATAACTCTCGCCTTGTTCACAGACGTTACCAATTCCAAGGAACTTCTTGATTATATGCAAGCTGGAACTCTGGAACCGGAAGTTGCATTTCTCAATGCTTCTCTTATTCCTGATGTTTTCCCGCTACTTGCGGCTGCTTATAAGACACTGATATCCAAGTCAAGGGATTCACTGATTACTCGCACCCTTCATTCAGAACTTGTCTACAATTATTCGGGTTCAAAGCATATTACAGAGTCTTTGAAAAGATGTGGAATTTCTGAGAGCTCTTCTTATGTCCTTGCGGCTCGTTTTAATGCTTCTCCCGATGAGATTAAGGCCATTGAGAAACTAATTCATGGAAGAGAGATCGACCTCGAGGAATTGGGAGAGAGAGCTGATCAAGCTCTAATACAAAAGCATTTTAAGATCACTGGACCCGAGTTGACAGTATCCTCAGTTGGAGATGCTATAACATGTAGAATCGCTGCTCGGGATGCCTTGTAGATGAAGATTACAGGTTTCATCTTTGGCTGCTGGCCCACAAAGTTACTCCTTTGTAGGTGAACGTATTAAATTGTTTACAATATATTACTCTTAGTTGGCCTAGAGACCGGCGTTGTTATCCTTGTTTAAAAAAAAATAACAAAAGTATGTTACTGTTAGTTTGGTGATGTTTATACAATTTTATAGAATGTTCAAATAATTGTGCTGTGATGTCCGATGGGAATTGACTAATTTACC

Coding sequence (CDS)

ATGAAGGTGATCGAGATCAACGGAACCACCATAACTCTCGCCTTGTTCACAGACGTTACCAATTCCAAGGAACTTCTTGATTATATGCAAGCTGGAACTCTGGAACCGGAAGTTGCATTTCTCAATGCTTCTCTTATTCCTGATGTTTTCCCGCTACTTGCGGCTGCTTATAAGACACTGATATCCAAGTCAAGGGATTCACTGATTACTCGCACCCTTCATTCAGAACTTGTCTACAATTATTCGGGTTCAAAGCATATTACAGAGTCTTTGAAAAGATGTGGAATTTCTGAGAGCTCTTCTTATGTCCTTGCGGCTCGTTTTAATGCTTCTCCCGATGAGATTAAGGCCATTGAGAAACTAATTCATGGAAGAGAGATCGACCTCGAGGAATTGGGAGAGAGAGCTGATCAAGCTCTAATACAAAAGCATTTTAAGATCACTGGACCCGAGTTGACAGTATCCTCAGTTGGAGATGCTATAACATGTAGAATCGCTGCTCGGGATGCCTTGTAG

Protein sequence

MKVIEINGTTITLALFTDVTNSKELLDYMQAGTLEPEVAFLNASLIPDVFPLLAAAYKTLISKSRDSLITRTLHSELVYNYSGSKHITESLKRCGISESSSYVLAARFNASPDEIKAIEKLIHGREIDLEELGERADQALIQKHFKITGPELTVSSVGDAITCRIAARDAL

Homology

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BLAST of Sed0027718 vs. NCBI nr
Match: XP_023524844.1 (EKC/KEOPS complex subunit Tprkb isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 307.8 bits (787), Expect = 6.0e-80
Identity = 159/171 (92.98%), Postives = 165/171 (96.49%), Query Frame = 0


Query: 1   MKVIEINGTTITLALFTDVTNSKELLDYMQAGTLEPEVAFLNASLIPDVFPLLAAAYKTL 60
           MKV EINGTT+TLALFTDVTNSKELLD MQAGTLEPEVAFLNASLIPDVFP+LAAAYKTL
Sbjct: 1   MKVFEINGTTLTLALFTDVTNSKELLDAMQAGTLEPEVAFLNASLIPDVFPVLAAAYKTL 60

Query: 61  ISKSRDSLITRTLHSELVYNYSGSKHITESLKRCGISESSSYVLAARFNASPDEIKAIEK 120
           ISKSRDSL TRTLHSELVYNYSGSKHITESLKRCGIS+SSSYVLAARFNASPDE KAIEK
Sbjct: 61  ISKSRDSLTTRTLHSELVYNYSGSKHITESLKRCGISDSSSYVLAARFNASPDETKAIEK 120

Query: 121 LIHGREIDLEELGERADQALIQKHFKITGPELTVSSVGDAITCRIAARDAL 172
           L+HG EI+LEELG RADQALIQKHFKITGPELT+SSVGDAITCRIAARDAL
Sbjct: 121 LVHGEEINLEELGGRADQALIQKHFKITGPELTISSVGDAITCRIAARDAL 171

[Close]

BLAST of Sed0027718 vs. NCBI nr
Match: XP_022941609.1 (EKC/KEOPS complex subunit Tprkb isoform X1 [Cucurbita moschata] >KAG7030987.1 EKC/KEOPS complex subunit Tprkb [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 305.4 bits (781), Expect = 3.0e-79
Identity = 158/171 (92.40%), Postives = 164/171 (95.91%), Query Frame = 0


Query: 1   MKVIEINGTTITLALFTDVTNSKELLDYMQAGTLEPEVAFLNASLIPDVFPLLAAAYKTL 60
           MKV EINGTT+TLALFTDVTNSKELLD MQA TLEPEVAFLNASLIPDVFP+LAAAYKTL
Sbjct: 1   MKVFEINGTTLTLALFTDVTNSKELLDAMQAATLEPEVAFLNASLIPDVFPVLAAAYKTL 60

Query: 61  ISKSRDSLITRTLHSELVYNYSGSKHITESLKRCGISESSSYVLAARFNASPDEIKAIEK 120
           ISKSRDSL TRTLHSELVYNYSGSKHITESLKRCGIS+SSSYVLAARFNASPDE KAIEK
Sbjct: 61  ISKSRDSLTTRTLHSELVYNYSGSKHITESLKRCGISDSSSYVLAARFNASPDETKAIEK 120

Query: 121 LIHGREIDLEELGERADQALIQKHFKITGPELTVSSVGDAITCRIAARDAL 172
           L+HG EI+LEELG RADQALIQKHFKITGPELT+SSVGDAITCRIAARDAL
Sbjct: 121 LVHGEEINLEELGGRADQALIQKHFKITGPELTISSVGDAITCRIAARDAL 171

[Close]

BLAST of Sed0027718 vs. NCBI nr
Match: XP_022983047.1 (EKC/KEOPS complex subunit Tprkb [Cucurbita maxima])

HSP 1 Score: 303.5 bits (776), Expect = 1.1e-78
Identity = 156/171 (91.23%), Postives = 163/171 (95.32%), Query Frame = 0


Query: 1   MKVIEINGTTITLALFTDVTNSKELLDYMQAGTLEPEVAFLNASLIPDVFPLLAAAYKTL 60
           MKV EINGTT+TLALFTDVTNSKELLD MQAGTLEPEVAFLNASLIPDVFP+LAAAYKT 
Sbjct: 1   MKVFEINGTTLTLALFTDVTNSKELLDAMQAGTLEPEVAFLNASLIPDVFPVLAAAYKTQ 60

Query: 61  ISKSRDSLITRTLHSELVYNYSGSKHITESLKRCGISESSSYVLAARFNASPDEIKAIEK 120
           ISKSRDSL TRTLHSELVYNYSGSKHITESLKRCGIS+SSSYVLAARFNASPDE KAIEK
Sbjct: 61  ISKSRDSLTTRTLHSELVYNYSGSKHITESLKRCGISDSSSYVLAARFNASPDETKAIEK 120

Query: 121 LIHGREIDLEELGERADQALIQKHFKITGPELTVSSVGDAITCRIAARDAL 172
           L+HG EI+LEELG RADQALIQKHFKITGPELT+SS+GD ITCRIAARDAL
Sbjct: 121 LVHGEEINLEELGGRADQALIQKHFKITGPELTISSIGDTITCRIAARDAL 171

[Close]

BLAST of Sed0027718 vs. NCBI nr
Match: XP_038898952.1 (EKC/KEOPS complex subunit TPRKB [Benincasa hispida])

HSP 1 Score: 300.1 bits (767), Expect = 1.3e-77
Identity = 155/171 (90.64%), Postives = 164/171 (95.91%), Query Frame = 0


Query: 1   MKVIEINGTTITLALFTDVTNSKELLDYMQAGTLEPEVAFLNASLIPDVFPLLAAAYKTL 60
           MKV EIN +T+TLALFTDVTNSKELLD MQAGTLEPEVAFLNASLIPDVFP+LAAAYKTL
Sbjct: 1   MKVFEINRSTLTLALFTDVTNSKELLDSMQAGTLEPEVAFLNASLIPDVFPVLAAAYKTL 60

Query: 61  ISKSRDSLITRTLHSELVYNYSGSKHITESLKRCGISESSSYVLAARFNASPDEIKAIEK 120
           +SKSRDSL TRTLHSELVYNYSGSKHITESLKRCGIS+SSSYVLAA FNASPDE+KAIEK
Sbjct: 61  VSKSRDSLTTRTLHSELVYNYSGSKHITESLKRCGISDSSSYVLAACFNASPDEMKAIEK 120

Query: 121 LIHGREIDLEELGERADQALIQKHFKITGPELTVSSVGDAITCRIAARDAL 172
           L+HG EI+LEELGERADQA IQKHFKITGPELT+SSVGDAITCRIAARDAL
Sbjct: 121 LVHGNEINLEELGERADQAQIQKHFKITGPELTLSSVGDAITCRIAARDAL 171

[Close]

BLAST of Sed0027718 vs. NCBI nr
Match: XP_008456125.1 (PREDICTED: EKC/KEOPS complex subunit Tprkb [Cucumis melo] >TYK25942.1 EKC/KEOPS complex subunit Tprkb [Cucumis melo var. makuwa])

HSP 1 Score: 293.5 bits (750), Expect = 1.2e-75
Identity = 150/171 (87.72%), Postives = 163/171 (95.32%), Query Frame = 0


Query: 1   MKVIEINGTTITLALFTDVTNSKELLDYMQAGTLEPEVAFLNASLIPDVFPLLAAAYKTL 60
           MKV +IN +T+TLALFTDVTNSKELLD MQAGTLEPEVAFLNASLIPDVFP+LAAA+KTL
Sbjct: 1   MKVFQINDSTLTLALFTDVTNSKELLDSMQAGTLEPEVAFLNASLIPDVFPVLAAAHKTL 60

Query: 61  ISKSRDSLITRTLHSELVYNYSGSKHITESLKRCGISESSSYVLAARFNASPDEIKAIEK 120
           +SKSR SL TRTLHSELVYNYSGSKHITESL+RCGIS+SSSYVLAA FN SPDE+KAIEK
Sbjct: 61  VSKSRGSLTTRTLHSELVYNYSGSKHITESLRRCGISDSSSYVLAACFNTSPDEVKAIEK 120

Query: 121 LIHGREIDLEELGERADQALIQKHFKITGPELTVSSVGDAITCRIAARDAL 172
           L+HG+EI+LEELGERADQA IQKHFKITGPELT+SSVGDAITCRIAARDAL
Sbjct: 121 LVHGKEINLEELGERADQAQIQKHFKITGPELTLSSVGDAITCRIAARDAL 171

[Close]

BLAST of Sed0027718 vs. ExPASy Swiss-Prot
Match: F1QZ15 (EKC/KEOPS complex subunit TPRKB OS=Danio rerio OX=7955 GN=tprkb PE=2 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 4.9e-16
Identity = 54/162 (33.33%), Postives = 90/162 (55.56%), Query Frame = 0


Query: 10  TITLALFTDVTNSKELLDYMQAGTLEPEVAFLNASLIPDVFPLLAAAYKTLISKSRDSLI 69
           T+T  LF DV N+ EL      G  E + A +N S++ D F +L A  K +       + 
Sbjct: 14  TVTQLLFKDVKNATELRKMAVNG--EIKGALINPSMVVDAFQILVATNKAVHLHKIGKMK 73

Query: 70  TRTLHSELVYNYSGSKHITESLKRCGISESSS--YVLAARFNASPDEIKAIEKLIHGREI 129
           TR+L+SE+++N S + +I+E+ KR GIS+S +  +++          I  I   + G++I
Sbjct: 74  TRSLYSEIIFNLSPTNNISEAFKRFGISDSDTAVHIVLVHNKEETLNIDDIISKVDGQQI 133

Query: 130 DLEELGERADQALIQKHFKITGPELTVSSVGDAITCRIAARD 170
           D+ ++ E  D A I+K +KIT  E    ++ DA+ CR+A +D
Sbjct: 134 DVGQVSEMTDTAKIKKLYKITPQEDKCGTLLDAVVCRMAIKD 173

[Close]

BLAST of Sed0027718 vs. ExPASy Swiss-Prot
Match: Q8QZZ7 (EKC/KEOPS complex subunit Tprkb OS=Mus musculus OX=10090 GN=Tprkb PE=1 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 5.4e-15
Identity = 49/163 (30.06%), Postives = 94/163 (57.67%), Query Frame = 0


Query: 11  ITLALFTDVTNSKELLDYMQAGTLEPEVAFLNASLIPDVFPLLAAAYKTLISKSRDSLIT 70
           +TL LF DV N+ +L      G+++   + +N ++I D F +L AA K +       + T
Sbjct: 15  VTLLLFKDVKNAGDLRKKAMEGSIDG--SLINPNVIVDPFQILVAANKAVHLHRLGKMKT 74

Query: 71  RTLHSELVYNYSGSKHITESLKRCGISESSSYVLAARFNASPDEI--KAIEKLIHGREID 130
           RTL +E+++N S + +I+E+LK+ GISE+++ VL         ++  + +   + G+++ 
Sbjct: 75  RTLSTEIIFNLSPNNNISEALKKFGISETNTSVLIVYIEDGSKQVPQEHLVSQVEGQQVP 134

Query: 131 LEELGERADQALIQKHFKITGPELTVSSVGDAITCRIAARDAL 172
           LE L E    + ++K +K++  E  + ++ DAI CR++ +D L
Sbjct: 135 LESLPEITRLSEVKKIYKLSSQEERIGTLLDAIICRMSTKDVL 175

[Close]

BLAST of Sed0027718 vs. ExPASy Swiss-Prot
Match: Q9Y3C4 (EKC/KEOPS complex subunit TPRKB OS=Homo sapiens OX=9606 GN=TPRKB PE=1 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 2.7e-14
Identity = 48/163 (29.45%), Postives = 92/163 (56.44%), Query Frame = 0


Query: 11  ITLALFTDVTNSKELLDYMQAGTLEPEVAFLNASLIPDVFPLLAAAYKTLISKSRDSLIT 70
           +TL LF DV N+ +L      GT++   + +N ++I D F +L AA K +       + T
Sbjct: 15  VTLLLFKDVKNAGDLRRKAMEGTIDG--SLINPTVIVDPFQILVAANKAVHLYKLGKMKT 74

Query: 71  RTLHSELVYNYSGSKHITESLKRCGISESSSYVLAARFNASPDEI--KAIEKLIHGREID 130
           RTL +E+++N S + +I+E+LK+ GIS + + +L         +I  + +   + G ++ 
Sbjct: 75  RTLSTEIIFNLSPNNNISEALKKFGISANDTSILIVYIEEGEKQINQEYLISQVEGHQVS 134

Query: 131 LEELGERADQALIQKHFKITGPELTVSSVGDAITCRIAARDAL 172
           L+ L E  +   ++K +K++  E ++ ++ DAI CR++ +D L
Sbjct: 135 LKNLPEIMNITEVKKIYKLSSQEESIGTLLDAIICRMSTKDVL 175

[Close]

BLAST of Sed0027718 vs. ExPASy Swiss-Prot
Match: Q6C7C9 (EKC/KEOPS complex subunit CGI121 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) OX=284591 GN=CGI121 PE=3 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 3.6e-11
Identity = 39/141 (27.66%), Postives = 80/141 (56.74%), Query Frame = 0


Query: 11  ITLALFTDVTNSKELLDYMQAGTLEPEVAFLNASLIPDVFPLLAAAYKTLISKSRDSLIT 70
           I ++ F+DV N+ ++ + + +G  + +VAF+NA+ +     LLAA Y+ +  +   S+ T
Sbjct: 10  IAISYFSDVKNAGQIRNELLSGNPDYQVAFINANTLLSSKHLLAAVYRAVSDQEAGSMKT 69

Query: 71  RTLHSELVYNYSGSKHITESLKRCGISESSSYVLAARFNASPDEIKAIEKLIHGREIDL- 130
           + +HSE+++   G+ +I +SL+R GI + ++ ++A +            KL+ G E    
Sbjct: 70  KNVHSEVLFCLGGNNNIMDSLRRFGIQDDTTNIVAVKIGGG-----EYTKLVEGTEEPFT 129

Query: 131 -EELGERADQALIQKHFKITG 150
            E++ +  D  L++K +K+ G
Sbjct: 130 DEQIAKNTDIKLVKKVYKLPG 145

[Close]

BLAST of Sed0027718 vs. ExPASy Swiss-Prot
Match: Q6FV72 (EKC/KEOPS complex subunit CGI121 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) OX=284593 GN=CGI121 PE=3 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 2.3e-10
Identity = 49/168 (29.17%), Postives = 89/168 (52.98%), Query Frame = 0


Query: 2   KVIEINGTTITLALFTDVTNSKELLDYMQAGTLEPEVAFLNASLIPDVFPLLAAAYKTLI 61
           K+ +     I++  F +VTNS+ +    +  TL    AFL+A +I     L AA Y+ L+
Sbjct: 4   KIPQFPDFEISITAFENVTNSESIRS--KVATL--PYAFLDARMIYSQEQLYAALYRVLV 63

Query: 62  SKSRDSLITRTLHSELVYNYSGSKHITESLKRCGISESSSYVLAARFNASPD--EIKAIE 121
            ++ + L T+T+HSE++   S + +I ++ K+ GI E SS V+        D  E+ ++ 
Sbjct: 64  EQNYNKLRTKTIHSEIMLCLSPTSNIGDAFKKFGIKEDSSTVICLHIKDRSDEPELPSLS 123

Query: 122 KLIHGREIDL--EELGERADQALIQKHFKITGPELTVSSVGDAITCRI 166
            ++ G+EI L  E + +  D  ++   +KI G E+  +S  D ++  I
Sbjct: 124 SIVEGQEISLSKEFINQHRDIGMVGHVYKING-EMIENSTEDQVSSMI 166

[Close]

BLAST of Sed0027718 vs. ExPASy TrEMBL
Match: A0A6J1FNX6 (EKC/KEOPS complex subunit Tprkb isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111446917 PE=3 SV=1)

HSP 1 Score: 305.4 bits (781), Expect = 1.4e-79
Identity = 158/171 (92.40%), Postives = 164/171 (95.91%), Query Frame = 0


Query: 1   MKVIEINGTTITLALFTDVTNSKELLDYMQAGTLEPEVAFLNASLIPDVFPLLAAAYKTL 60
           MKV EINGTT+TLALFTDVTNSKELLD MQA TLEPEVAFLNASLIPDVFP+LAAAYKTL
Sbjct: 1   MKVFEINGTTLTLALFTDVTNSKELLDAMQAATLEPEVAFLNASLIPDVFPVLAAAYKTL 60

Query: 61  ISKSRDSLITRTLHSELVYNYSGSKHITESLKRCGISESSSYVLAARFNASPDEIKAIEK 120
           ISKSRDSL TRTLHSELVYNYSGSKHITESLKRCGIS+SSSYVLAARFNASPDE KAIEK
Sbjct: 61  ISKSRDSLTTRTLHSELVYNYSGSKHITESLKRCGISDSSSYVLAARFNASPDETKAIEK 120

Query: 121 LIHGREIDLEELGERADQALIQKHFKITGPELTVSSVGDAITCRIAARDAL 172
           L+HG EI+LEELG RADQALIQKHFKITGPELT+SSVGDAITCRIAARDAL
Sbjct: 121 LVHGEEINLEELGGRADQALIQKHFKITGPELTISSVGDAITCRIAARDAL 171

[Close]

BLAST of Sed0027718 vs. ExPASy TrEMBL
Match: A0A6J1IY73 (EKC/KEOPS complex subunit Tprkb OS=Cucurbita maxima OX=3661 GN=LOC111481707 PE=3 SV=1)

HSP 1 Score: 303.5 bits (776), Expect = 5.5e-79
Identity = 156/171 (91.23%), Postives = 163/171 (95.32%), Query Frame = 0


Query: 1   MKVIEINGTTITLALFTDVTNSKELLDYMQAGTLEPEVAFLNASLIPDVFPLLAAAYKTL 60
           MKV EINGTT+TLALFTDVTNSKELLD MQAGTLEPEVAFLNASLIPDVFP+LAAAYKT 
Sbjct: 1   MKVFEINGTTLTLALFTDVTNSKELLDAMQAGTLEPEVAFLNASLIPDVFPVLAAAYKTQ 60

Query: 61  ISKSRDSLITRTLHSELVYNYSGSKHITESLKRCGISESSSYVLAARFNASPDEIKAIEK 120
           ISKSRDSL TRTLHSELVYNYSGSKHITESLKRCGIS+SSSYVLAARFNASPDE KAIEK
Sbjct: 61  ISKSRDSLTTRTLHSELVYNYSGSKHITESLKRCGISDSSSYVLAARFNASPDETKAIEK 120

Query: 121 LIHGREIDLEELGERADQALIQKHFKITGPELTVSSVGDAITCRIAARDAL 172
           L+HG EI+LEELG RADQALIQKHFKITGPELT+SS+GD ITCRIAARDAL
Sbjct: 121 LVHGEEINLEELGGRADQALIQKHFKITGPELTISSIGDTITCRIAARDAL 171

[Close]

BLAST of Sed0027718 vs. ExPASy TrEMBL
Match: A0A5D3DQY2 (EKC/KEOPS complex subunit Tprkb OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1441G00010 PE=3 SV=1)

HSP 1 Score: 293.5 bits (750), Expect = 5.7e-76
Identity = 150/171 (87.72%), Postives = 163/171 (95.32%), Query Frame = 0


Query: 1   MKVIEINGTTITLALFTDVTNSKELLDYMQAGTLEPEVAFLNASLIPDVFPLLAAAYKTL 60
           MKV +IN +T+TLALFTDVTNSKELLD MQAGTLEPEVAFLNASLIPDVFP+LAAA+KTL
Sbjct: 1   MKVFQINDSTLTLALFTDVTNSKELLDSMQAGTLEPEVAFLNASLIPDVFPVLAAAHKTL 60

Query: 61  ISKSRDSLITRTLHSELVYNYSGSKHITESLKRCGISESSSYVLAARFNASPDEIKAIEK 120
           +SKSR SL TRTLHSELVYNYSGSKHITESL+RCGIS+SSSYVLAA FN SPDE+KAIEK
Sbjct: 61  VSKSRGSLTTRTLHSELVYNYSGSKHITESLRRCGISDSSSYVLAACFNTSPDEVKAIEK 120

Query: 121 LIHGREIDLEELGERADQALIQKHFKITGPELTVSSVGDAITCRIAARDAL 172
           L+HG+EI+LEELGERADQA IQKHFKITGPELT+SSVGDAITCRIAARDAL
Sbjct: 121 LVHGKEINLEELGERADQAQIQKHFKITGPELTLSSVGDAITCRIAARDAL 171

[Close]

BLAST of Sed0027718 vs. ExPASy TrEMBL
Match: A0A1S3C2H5 (EKC/KEOPS complex subunit Tprkb OS=Cucumis melo OX=3656 GN=LOC103496157 PE=3 SV=1)

HSP 1 Score: 293.5 bits (750), Expect = 5.7e-76
Identity = 150/171 (87.72%), Postives = 163/171 (95.32%), Query Frame = 0


Query: 1   MKVIEINGTTITLALFTDVTNSKELLDYMQAGTLEPEVAFLNASLIPDVFPLLAAAYKTL 60
           MKV +IN +T+TLALFTDVTNSKELLD MQAGTLEPEVAFLNASLIPDVFP+LAAA+KTL
Sbjct: 1   MKVFQINDSTLTLALFTDVTNSKELLDSMQAGTLEPEVAFLNASLIPDVFPVLAAAHKTL 60

Query: 61  ISKSRDSLITRTLHSELVYNYSGSKHITESLKRCGISESSSYVLAARFNASPDEIKAIEK 120
           +SKSR SL TRTLHSELVYNYSGSKHITESL+RCGIS+SSSYVLAA FN SPDE+KAIEK
Sbjct: 61  VSKSRGSLTTRTLHSELVYNYSGSKHITESLRRCGISDSSSYVLAACFNTSPDEVKAIEK 120

Query: 121 LIHGREIDLEELGERADQALIQKHFKITGPELTVSSVGDAITCRIAARDAL 172
           L+HG+EI+LEELGERADQA IQKHFKITGPELT+SSVGDAITCRIAARDAL
Sbjct: 121 LVHGKEINLEELGERADQAQIQKHFKITGPELTLSSVGDAITCRIAARDAL 171

[Close]

BLAST of Sed0027718 vs. ExPASy TrEMBL
Match: A0A6J1D7F7 (EKC/KEOPS complex subunit TPRKB OS=Momordica charantia OX=3673 GN=LOC111017625 PE=3 SV=1)

HSP 1 Score: 292.7 bits (748), Expect = 9.7e-76
Identity = 150/171 (87.72%), Postives = 162/171 (94.74%), Query Frame = 0


Query: 1   MKVIEINGTTITLALFTDVTNSKELLDYMQAGTLEPEVAFLNASLIPDVFPLLAAAYKTL 60
           MK+  ING+TITLALF DVTNSKELLD MQAGTLEPEVAFLNASLIPDVFP+LA+AYKTL
Sbjct: 1   MKMFGINGSTITLALFVDVTNSKELLDSMQAGTLEPEVAFLNASLIPDVFPVLASAYKTL 60

Query: 61  ISKSRDSLITRTLHSELVYNYSGSKHITESLKRCGISESSSYVLAARFNASPDEIKAIEK 120
           +SKSRDSL TRT HSELVYNYSGSKHITESLKRCGIS++SSYVLAARFNASP E++A+EK
Sbjct: 61  VSKSRDSLTTRTPHSELVYNYSGSKHITESLKRCGISDNSSYVLAARFNASPAEMEAVEK 120

Query: 121 LIHGREIDLEELGERADQALIQKHFKITGPELTVSSVGDAITCRIAARDAL 172
           L+HG+EI LEELGERADQA IQKHFKITGPELTVSSVGDAITCRIAARDAL
Sbjct: 121 LVHGKEISLEELGERADQAKIQKHFKITGPELTVSSVGDAITCRIAARDAL 171

[Close]

BLAST of Sed0027718 vs. TAIR 10
Match: AT4G34412.1 (CONTAINS InterPro DOMAIN/s: Kinase binding protein CGI-121 (InterPro:IPR013926); Has 275 Blast hits to 275 proteins in 139 species: Archae - 0; Bacteria - 5; Metazoa - 98; Fungi - 109; Plants - 42; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). )

HSP 1 Score: 233.4 bits (594), Expect = 1.3e-61
Identity = 123/172 (71.51%), Postives = 148/172 (86.05%), Query Frame = 0


Query: 1   MKVIEIN-GTTITLALFTDVTNSKELLDYMQAGTLEPEVAFLNASLIPDVFPLLAAAYKT 60
           MKV  ++ G T++++LF+ VTNSKELL+ M  G+L+ EV+FLNASLIPD+FPLLAAA K 
Sbjct: 1   MKVFNLDRGNTLSVSLFSGVTNSKELLNSMLDGSLKLEVSFLNASLIPDIFPLLAAAQKA 60

Query: 61  LISKSRDSLITRTLHSELVYNYSGSKHITESLKRCGISESSSYVLAARFNASPDEIKAIE 120
           LISKSRDSL TRTLHSELVYNYSGSKHITESLKRCGISE+++Y+LAARFNASP E++ + 
Sbjct: 61  LISKSRDSLSTRTLHSELVYNYSGSKHITESLKRCGISENTTYILAARFNASPVEMEEVA 120

Query: 121 KLIHGREIDLEELGERADQALIQKHFKITGPELTVSSVGDAITCRIAARDAL 172
           KLI+G+EIDLEEL   A+QA I KH+KIT  EL +SS+GDAI CRIAARDAL
Sbjct: 121 KLINGKEIDLEELKTHANQANILKHYKITSQELGISSLGDAIVCRIAARDAL 172

The following BLAST results are available for this feature:

BLAST of Sed0027718 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023524844.1	6.0e-80	92.98	EKC/KEOPS complex subunit Tprkb isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_022941609.1	3.0e-79	92.40	EKC/KEOPS complex subunit Tprkb isoform X1 [Cucurbita moschata] >KAG7030987.1 EK...	[more]
XP_022983047.1	1.1e-78	91.23	EKC/KEOPS complex subunit Tprkb [Cucurbita maxima]	[more]
XP_038898952.1	1.3e-77	90.64	EKC/KEOPS complex subunit TPRKB [Benincasa hispida]	[more]
XP_008456125.1	1.2e-75	87.72	PREDICTED: EKC/KEOPS complex subunit Tprkb [Cucumis melo] >TYK25942.1 EKC/KEOPS ...	[more]

BLAST of Sed0027718 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F1QZ15	4.9e-16	33.33	EKC/KEOPS complex subunit TPRKB OS=Danio rerio OX=7955 GN=tprkb PE=2 SV=1	[more]
Q8QZZ7	5.4e-15	30.06	EKC/KEOPS complex subunit Tprkb OS=Mus musculus OX=10090 GN=Tprkb PE=1 SV=1	[more]
Q9Y3C4	2.7e-14	29.45	EKC/KEOPS complex subunit TPRKB OS=Homo sapiens OX=9606 GN=TPRKB PE=1 SV=1	[more]
Q6C7C9	3.6e-11	27.66	EKC/KEOPS complex subunit CGI121 OS=Yarrowia lipolytica (strain CLIB 122 / E 150...	[more]
Q6FV72	2.3e-10	29.17	EKC/KEOPS complex subunit CGI121 OS=Candida glabrata (strain ATCC 2001 / CBS 138...	[more]

BLAST of Sed0027718 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FNX6	1.4e-79	92.40	EKC/KEOPS complex subunit Tprkb isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A6J1IY73	5.5e-79	91.23	EKC/KEOPS complex subunit Tprkb OS=Cucurbita maxima OX=3661 GN=LOC111481707 PE=3...	[more]
A0A5D3DQY2	5.7e-76	87.72	EKC/KEOPS complex subunit Tprkb OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A1S3C2H5	5.7e-76	87.72	EKC/KEOPS complex subunit Tprkb OS=Cucumis melo OX=3656 GN=LOC103496157 PE=3 SV=...	[more]
A0A6J1D7F7	9.7e-76	87.72	EKC/KEOPS complex subunit TPRKB OS=Momordica charantia OX=3673 GN=LOC111017625 P...	[more]

BLAST of Sed0027718 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G34412.1	1.3e-61	71.51	CONTAINS InterPro DOMAIN/s: Kinase binding protein CGI-121 (InterPro:IPR013926);...	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036504	CGI121/TPRKB superfamily	GENE3D	3.30.2380.10	CGI121/TPRKB	coord: 1..171 e-value: 2.8E-51 score: 175.9
IPR036504	CGI121/TPRKB superfamily	SUPERFAMILY	143870	PF0523-like	coord: 5..148
IPR013926	CGI121/TPRKB	PFAM	PF08617	CGI-121	coord: 16..168 e-value: 2.9E-35 score: 121.8
IPR013926	CGI121/TPRKB	PANTHER	PTHR15840	CGI-121 FAMILY MEMBER	coord: 7..171

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0027718.1	Sed0027718.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000722	telomere maintenance via recombination
biological_process	GO:0002949	tRNA threonylcarbamoyladenosine modification
cellular_component	GO:0005829	cytosol
cellular_component	GO:0000408	EKC/KEOPS complex
cellular_component	GO:0005634	nucleus