Sed0027688 (gene) Chayote v1

Overview


Name	Sed0027688
Type	gene
Organism	Sechium edule (Chayote v1)
Description	cysteine proteinase inhibitor 1-like
Location	LG08: 33594656 .. 33595202 (-)
RNA-Seq Expression	Sed0027688
Synteny	Sed0027688

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAGCACTTGCACAAAAACATGGCAAAGTCGTCTCTTTTTCTTGTAGCTTCTGTCCTAATTTTGTTGCCGCTGTTGTTAGGAGCCAAAGTCACAGATGAGAAATGTGGGTACCAACCAATAGAGAACATAAAGGACCCATATTTCCAAAGCTTGGGGCGCCTGGCTGTGGCTCAATACAACAAGCAATACAATAGGAATTTGATATTTCAAGAGGTTTTTGGTGGGAACTACTTTGATTACATTGGCACCAGCTATGACCTCAGGCTTAGAGCCATCGACAACGTCGTTAGCCGCATCTATATAGCCTTGTTGTTCAAAGCCGACACTGCCCAAGGTGCGAAGTTCGTCCTCAACGACTTCATTCCTATCACCCGGAACCAAAATCCCGATAATTAATTAATTAATTAATGTTTCGTGTTAGCTTATTTATGCATGCTAGATATACCCTTTTAAGTGTTGGTTATTATGCCGTTTTAGACTCTATGTTATGTCCACCTTGTGTTTCTTTTCAAGATCAATAAAATGCTAGCACGTCTTATTTTGTTA

mRNA sequence

CAAGCACTTGCACAAAAACATGGCAAAGTCGTCTCTTTTTCTTGTAGCTTCTGTCCTAATTTTGTTGCCGCTGTTGTTAGGAGCCAAAGTCACAGATGAGAAATGTGGGTACCAACCAATAGAGAACATAAAGGACCCATATTTCCAAAGCTTGGGGCGCCTGGCTGTGGCTCAATACAACAAGCAATACAATAGGAATTTGATATTTCAAGAGGTTTTTGGTGGGAACTACTTTGATTACATTGGCACCAGCTATGACCTCAGGCTTAGAGCCATCGACAACGTCGTTAGCCGCATCTATATAGCCTTGTTGTTCAAAGCCGACACTGCCCAAGGTGCGAAGTTCGTCCTCAACGACTTCATTCCTATCACCCGGAACCAAAATCCCGATAATTAATTAATTAATTAATGTTTCGTGTTAGCTTATTTATGCATGCTAGATATACCCTTTTAAGTGTTGGTTATTATGCCGTTTTAGACTCTATGTTATGTCCACCTTGTGTTTCTTTTCAAGATCAATAAAATGCTAGCACGTCTTATTTTGTTA

Coding sequence (CDS)

ATGGCAAAGTCGTCTCTTTTTCTTGTAGCTTCTGTCCTAATTTTGTTGCCGCTGTTGTTAGGAGCCAAAGTCACAGATGAGAAATGTGGGTACCAACCAATAGAGAACATAAAGGACCCATATTTCCAAAGCTTGGGGCGCCTGGCTGTGGCTCAATACAACAAGCAATACAATAGGAATTTGATATTTCAAGAGGTTTTTGGTGGGAACTACTTTGATTACATTGGCACCAGCTATGACCTCAGGCTTAGAGCCATCGACAACGTCGTTAGCCGCATCTATATAGCCTTGTTGTTCAAAGCCGACACTGCCCAAGGTGCGAAGTTCGTCCTCAACGACTTCATTCCTATCACCCGGAACCAAAATCCCGATAATTAA

Protein sequence

MAKSSLFLVASVLILLPLLLGAKVTDEKCGYQPIENIKDPYFQSLGRLAVAQYNKQYNRNLIFQEVFGGNYFDYIGTSYDLRLRAIDNVVSRIYIALLFKADTAQGAKFVLNDFIPITRNQNPDN

Homology

[Close]

BLAST of Sed0027688 vs. NCBI nr
Match: XP_022142674.1 (cysteine proteinase inhibitor 1-like [Momordica charantia])

HSP 1 Score: 79.7 bits (195), Expect = 1.9e-11
Identity = 52/119 (43.70%), Postives = 75/119 (63.03%), Query Frame = 0


Query: 1   MAKSSLFLVASVLILLPLLL-GAKVTDEKCGYQPIENIKDPYFQSLGRLAVAQYNKQYNR 60
           MAK SLFLVAS+L+LL   + GA+      GY+ I+N+ DPY QSLG+ AV ++N++   
Sbjct: 1   MAK-SLFLVASLLVLLAAAVSGARREALAGGYEAIKNVNDPYIQSLGKFAVEEHNRKAKD 60

Query: 61  NLIFQEVFGGNYFDYIGTSYDLRLRAIDNVVSRIYIALLFKADTAQGAKFVLNDFIPIT 119
           +L F++V  G      GT+Y L+++AID  VSR+Y A ++K D     K  LN F  +T
Sbjct: 61  DLKFEKVKSGLVQIVDGTNYSLQVQAIDGTVSRLYSAAVYK-DLKGNLK--LNQFFAMT 115

[Close]

BLAST of Sed0027688 vs. NCBI nr
Match: XP_004151251.1 (cysteine proteinase inhibitor 5 [Cucumis sativus])

HSP 1 Score: 78.2 bits (191), Expect = 5.7e-11
Identity = 46/103 (44.66%), Postives = 63/103 (61.17%), Query Frame = 0


Query: 1   MAKSSLFLVASVLILLPLLLGAKVT----DEKCGYQPIENIKDPYFQSLGRLAVAQYNKQ 60
           MA+S +F+ AS+L+ +  +     T    D   GY+PI++I DPY QSLG  AV ++NKQ
Sbjct: 1   MARSLIFM-ASLLLFIVSMSSVAATRAQLDLLGGYKPIKDIADPYIQSLGEFAVNEHNKQ 60

Query: 61  YNRNLIFQEVFGGNYFDYIGTSYDLRLRAIDNVVSRIYIALLF 100
               L FQ+V GG      GT+YDLRL A++  VSR Y  L+F
Sbjct: 61  AKTELKFQKVIGGKLQIVAGTNYDLRLTALEGTVSRTYGTLVF 102

[Close]

BLAST of Sed0027688 vs. NCBI nr
Match: KAE8652869.1 (hypothetical protein Csa_013019 [Cucumis sativus])

HSP 1 Score: 78.2 bits (191), Expect = 5.7e-11
Identity = 46/103 (44.66%), Postives = 63/103 (61.17%), Query Frame = 0


Query: 1   MAKSSLFLVASVLILLPLLLGAKVT----DEKCGYQPIENIKDPYFQSLGRLAVAQYNKQ 60
           MA+S +F+ AS+L+ +  +     T    D   GY+PI++I DPY QSLG  AV ++NKQ
Sbjct: 50  MARSLIFM-ASLLLFIVSMSSVAATRAQLDLLGGYKPIKDIADPYIQSLGEFAVNEHNKQ 109

Query: 61  YNRNLIFQEVFGGNYFDYIGTSYDLRLRAIDNVVSRIYIALLF 100
               L FQ+V GG      GT+YDLRL A++  VSR Y  L+F
Sbjct: 110 AKTELKFQKVIGGKLQIVAGTNYDLRLTALEGTVSRTYGTLVF 151

[Close]

BLAST of Sed0027688 vs. NCBI nr
Match: XP_038895826.1 (cysteine proteinase inhibitor 5-like [Benincasa hispida])

HSP 1 Score: 76.3 bits (186), Expect = 2.2e-10
Identity = 46/103 (44.66%), Postives = 62/103 (60.19%), Query Frame = 0


Query: 1   MAKSSLFLVASVLILLPLLLGAKVT----DEKCGYQPIENIKDPYFQSLGRLAVAQYNKQ 60
           MAK SLF +AS+L+ +  L     T    D    Y+PI+NI DP+ QSLG+ AV ++NKQ
Sbjct: 1   MAK-SLFFMASLLLFVESLSSVATTRSLLDLVGSYEPIKNIDDPHIQSLGKFAVDEHNKQ 60

Query: 61  YNRNLIFQEVFGGNYFDYIGTSYDLRLRAIDNVVSRIYIALLF 100
               L FQ+V  G      GT+Y+L L A++  VSRIY  L+F
Sbjct: 61  AKTQLKFQKVISGKLQIVAGTNYELELTALEGTVSRIYGTLIF 102

[Close]

BLAST of Sed0027688 vs. NCBI nr
Match: XP_038895825.1 (cysteine proteinase inhibitor 5-like [Benincasa hispida])

HSP 1 Score: 75.1 bits (183), Expect = 4.8e-10
Identity = 44/102 (43.14%), Postives = 61/102 (59.80%), Query Frame = 0


Query: 1   MAKSSLFLVASVLILLPLLLGA---KVTDEKCGYQPIENIKDPYFQSLGRLAVAQYNKQY 60
           MAKS  F+V+ +L ++ L   A    + D    Y+PI+NI DP+ QSLG  AV ++NKQ 
Sbjct: 1   MAKSLFFMVSLLLFVVSLSSVAATRSLLDLVGSYEPIKNIDDPHIQSLGEFAVDEHNKQA 60

Query: 61  NRNLIFQEVFGGNYFDYIGTSYDLRLRAIDNVVSRIYIALLF 100
              L FQ+V  G      GT+Y+L L A++  VSRIY  L+F
Sbjct: 61  KTQLKFQKVISGKLQIVAGTNYELELTALEGTVSRIYGTLIF 102

[Close]

BLAST of Sed0027688 vs. ExPASy Swiss-Prot
Match: P86472 (Cysteine proteinase inhibitor 1 OS=Actinidia chinensis var. chinensis OX=1590841 GN=CYT1 PE=1 SV=2)

HSP 1 Score: 48.9 bits (115), Expect = 4.8e-05
Identity = 33/94 (35.11%), Postives = 50/94 (53.19%), Query Frame = 0


Query: 11  SVLILLPLLLGAKVTDEK-----CGYQPIENIKDPYFQSLGRLAVAQYNKQYNRNLIFQE 70
           S+L+LL L L A V   +      G++PIEN+     Q + + AV+++NKQ N  L +Q 
Sbjct: 7   SLLLLLLLALSAAVVGGRKRVAAGGWRPIENLNSAEVQDVAQFAVSEHNKQANDELQYQS 66

Query: 71  VFGGNYFDYIGTSYDLRLRAIDNVVSRIYIALLF 100
           V  G      GT+Y L + A D  V   Y A+++
Sbjct: 67  VVRGYTQVVAGTNYRLVIAAKDGAVVGNYEAVVW 100

[Close]

BLAST of Sed0027688 vs. ExPASy Swiss-Prot
Match: Q6TPK4 (Cysteine proteinase inhibitor 1 OS=Actinidia deliciosa OX=3627 PE=1 SV=1)

HSP 1 Score: 45.4 bits (106), Expect = 5.3e-04
Identity = 31/94 (32.98%), Postives = 49/94 (52.13%), Query Frame = 0


Query: 11  SVLILLPLLLGAKVTDEK-----CGYQPIENIKDPYFQSLGRLAVAQYNKQYNRNLIFQE 70
           S+L+ L L L A V   +      G++PIE++     Q + + AV+++NKQ N  L +Q 
Sbjct: 7   SLLLFLLLALSAAVVGGRKLVAAGGWRPIESLNSAEVQDVAQFAVSEHNKQANDELQYQS 66

Query: 71  VFGGNYFDYIGTSYDLRLRAIDNVVSRIYIALLF 100
           V  G      GT+Y L + A D  V   Y A+++
Sbjct: 67  VVRGYTQVVAGTNYRLVIAAKDGAVVGNYEAVVW 100

[Close]

BLAST of Sed0027688 vs. ExPASy Swiss-Prot
Match: Q10Q46 (Cysteine proteinase inhibitor 6 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0210200 PE=3 SV=1)

HSP 1 Score: 45.1 bits (105), Expect = 7.0e-04
Identity = 28/87 (32.18%), Postives = 44/87 (50.57%), Query Frame = 0


Query: 30  GYQPIENIKDPYFQSLGRLAVAQYNK-QYNRNLIFQEVFGGNYFDYIGTSYDLRLRAID- 89
           G+ PI+NI DP+ Q LGR A+ + N+   +  L F  V GG      G +Y L + A   
Sbjct: 22  GWSPIKNIDDPHIQELGRWAITENNRVSPSDELTFHRVTGGEQQVVSGMNYRLEIEAASG 81

Query: 90  -NVVSRIYIALLFKADTAQGAKFVLND 114
              V+  Y A++F+ + +   K +  D
Sbjct: 82  GGDVTGSYGAVVFEQEWSNTRKLISFD 108

[Close]

BLAST of Sed0027688 vs. ExPASy TrEMBL
Match: A0A6J1CM53 (cysteine proteinase inhibitor 1-like OS=Momordica charantia OX=3673 GN=LOC111012731 PE=4 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 9.4e-12
Identity = 52/119 (43.70%), Postives = 75/119 (63.03%), Query Frame = 0


Query: 1   MAKSSLFLVASVLILLPLLL-GAKVTDEKCGYQPIENIKDPYFQSLGRLAVAQYNKQYNR 60
           MAK SLFLVAS+L+LL   + GA+      GY+ I+N+ DPY QSLG+ AV ++N++   
Sbjct: 1   MAK-SLFLVASLLVLLAAAVSGARREALAGGYEAIKNVNDPYIQSLGKFAVEEHNRKAKD 60

Query: 61  NLIFQEVFGGNYFDYIGTSYDLRLRAIDNVVSRIYIALLFKADTAQGAKFVLNDFIPIT 119
           +L F++V  G      GT+Y L+++AID  VSR+Y A ++K D     K  LN F  +T
Sbjct: 61  DLKFEKVKSGLVQIVDGTNYSLQVQAIDGTVSRLYSAAVYK-DLKGNLK--LNQFFAMT 115

[Close]

BLAST of Sed0027688 vs. ExPASy TrEMBL
Match: A0A0A0LYM0 (Cystatin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G183070 PE=4 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 2.7e-11
Identity = 46/103 (44.66%), Postives = 63/103 (61.17%), Query Frame = 0


Query: 1   MAKSSLFLVASVLILLPLLLGAKVT----DEKCGYQPIENIKDPYFQSLGRLAVAQYNKQ 60
           MA+S +F+ AS+L+ +  +     T    D   GY+PI++I DPY QSLG  AV ++NKQ
Sbjct: 1   MARSLIFM-ASLLLFIVSMSSVAATRAQLDLLGGYKPIKDIADPYIQSLGEFAVNEHNKQ 60

Query: 61  YNRNLIFQEVFGGNYFDYIGTSYDLRLRAIDNVVSRIYIALLF 100
               L FQ+V GG      GT+YDLRL A++  VSR Y  L+F
Sbjct: 61  AKTELKFQKVIGGKLQIVAGTNYDLRLTALEGTVSRTYGTLVF 102

[Close]

BLAST of Sed0027688 vs. ExPASy TrEMBL
Match: A0A5D3E5H4 (Cysteine proteinase inhibitor 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G001040 PE=4 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 3.4e-09
Identity = 34/70 (48.57%), Postives = 46/70 (65.71%), Query Frame = 0


Query: 30  GYQPIENIKDPYFQSLGRLAVAQYNKQYNRNLIFQEVFGGNYFDYIGTSYDLRLRAIDNV 89
           GY+PI++I DPY QS+G  AV ++NKQ    L FQ+V  G +    GT+Y LRL A++  
Sbjct: 26  GYKPIKDIADPYIQSIGEFAVNEHNKQAKTELKFQKVISGKFQIVAGTNYHLRLTALEGT 85

Query: 90  VSRIYIALLF 100
           VSR Y  L+F
Sbjct: 86  VSRTYGTLVF 95

[Close]

BLAST of Sed0027688 vs. ExPASy TrEMBL
Match: A0A5A7T201 (Cysteine proteinase inhibitor 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold285G003390 PE=4 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 3.4e-09
Identity = 34/70 (48.57%), Postives = 46/70 (65.71%), Query Frame = 0


Query: 30  GYQPIENIKDPYFQSLGRLAVAQYNKQYNRNLIFQEVFGGNYFDYIGTSYDLRLRAIDNV 89
           GY+PI++I DPY QS+G  AV ++NKQ    L FQ+V  G +    GT+Y LRL A++  
Sbjct: 16  GYKPIKDIADPYIQSIGEFAVNEHNKQAKTELKFQKVISGKFQIVAGTNYHLRLTALEGT 75

Query: 90  VSRIYIALLF 100
           VSR Y  L+F
Sbjct: 76  VSRTYGTLVF 85

[Close]

BLAST of Sed0027688 vs. ExPASy TrEMBL
Match: A0A6J1IIS7 (cysteine proteinase inhibitor 1-like OS=Cucurbita maxima OX=3661 GN=LOC111474432 PE=4 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 6.3e-08
Identity = 41/99 (41.41%), Postives = 57/99 (57.58%), Query Frame = 0


Query: 5   SLFLVASVLI----LLPLLLGAKVTDEKCGYQPIENIKDPYFQSLGRLAVAQYNKQYNRN 64
           +LF VAS+L+    L  L +  +  D    Y+PI+NI +P  QSLG  AV ++NKQ    
Sbjct: 4   ALFFVASLLLYVISLSLLAVATQRLDLAGSYKPIKNIDEPEIQSLGEFAVNEHNKQAKTQ 63

Query: 65  LIFQEVFGGNYFDYIGTSYDLRLRAIDNVVSRIYIALLF 100
           L FQ+V  G      GT+Y+LRL A++   SR Y  L+F
Sbjct: 64  LHFQKVISGEMQIVAGTNYNLRLTALEGTSSRTYGTLVF 102

The following BLAST results are available for this feature:

BLAST of Sed0027688 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022142674.1	1.9e-11	43.70	cysteine proteinase inhibitor 1-like [Momordica charantia]	[more]
XP_004151251.1	5.7e-11	44.66	cysteine proteinase inhibitor 5 [Cucumis sativus]	[more]
KAE8652869.1	5.7e-11	44.66	hypothetical protein Csa_013019 [Cucumis sativus]	[more]
XP_038895826.1	2.2e-10	44.66	cysteine proteinase inhibitor 5-like [Benincasa hispida]	[more]
XP_038895825.1	4.8e-10	43.14	cysteine proteinase inhibitor 5-like [Benincasa hispida]	[more]

BLAST of Sed0027688 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P86472	4.8e-05	35.11	Cysteine proteinase inhibitor 1 OS=Actinidia chinensis var. chinensis OX=1590841...	[more]
Q6TPK4	5.3e-04	32.98	Cysteine proteinase inhibitor 1 OS=Actinidia deliciosa OX=3627 PE=1 SV=1	[more]
Q10Q46	7.0e-04	32.18	Cysteine proteinase inhibitor 6 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03...	[more]

BLAST of Sed0027688 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CM53	9.4e-12	43.70	cysteine proteinase inhibitor 1-like OS=Momordica charantia OX=3673 GN=LOC111012...	[more]
A0A0A0LYM0	2.7e-11	44.66	Cystatin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G183070 PE...	[more]
A0A5D3E5H4	3.4e-09	48.57	Cysteine proteinase inhibitor 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A5A7T201	3.4e-09	48.57	Cysteine proteinase inhibitor 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_...	[more]
A0A6J1IIS7	6.3e-08	41.41	cysteine proteinase inhibitor 1-like OS=Cucurbita maxima OX=3661 GN=LOC111474432...	[more]

BLAST of Sed0027688 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.10.450.10		coord: 27..122 e-value: 4.0E-11 score: 44.8
None	No IPR available	SUPERFAMILY	54403	Cystatin/monellin	coord: 30..102
IPR000010	Cystatin domain	PFAM	PF16845	SQAPI	coord: 34..97 e-value: 1.2E-8 score: 35.2

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0027688.1	Sed0027688.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0004869	cysteine-type endopeptidase inhibitor activity