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Sed0027633 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CCGCGAATTTCTGTCGGTTCGATTCTCCATCTCCATCTTCTCCTCTTTCTTCGTGCCAACAACTGATCAATCTCAATCGTGATTTCATCTTTTTCCTTTTCCAAATTCGATCCATCTTCTCTTCCACTGTTGCAGTAATCTCTGTTCATCGCATTTTCTGATCCACTTTTGGTAATCGATTGCCTTTGTTCATCTGATCCACTTTGATCGGTGCATTTTTCTCCGTTTTCTTCGATTGCATGACTTCAATTCGTCTCTACCTCTTCCGATCGCCGTTCTCCACTTTCCGTTGCGAGTTCCGGTTCTTATTTTCTCGATTCCTCTCAGATCTCTGAGATTTCTTCTAAAAAACGATGGATCTGGTGGAGGAAGTGAGTGATCGCGATTCGCGAGTCTTTTTTCTCTTGATTTAATGTTCTTACTGATTTTTTGAAAGCTTAGAGTCCTGATTCTGTTGTATTTGTGCTTTGATGCAGAGATCGGAGTTCAAGAACGCTGGAAAATCGCCGGCGGCGGAAGTGAGTGACCGCGATTTAATGTTCTTACTGATTTTGAGACTTGCAGTCCTGATTCGGTTGTATCTGTGTGATTTAATGTAGAGATCGGAGTTCGAGAGCGCCGGAAAATCGTTAGCGGCGGAATGTGAGCGAAGTGTGAAGATCTGCGCCGATTGCGGCACGGCGAAGACTCCTCTCTGGCGCGGAGGTCCAGCCGGTCCTAAGGTGAGATCCGTTCATCGGAGAAATCTGTTTGGTTCATATCTCCGATTCCGATTCCGATTTTTGATTTTTGATTTCTTCAGTCTCTATGCAATGCGTGTGGGATCAGAAGCAGGAAGAAGAGGAAACCAGTGGTAGGGCTAAACAGAGGCGGAGAAGTGGAGAGAAAAAGCAACAGAATCATCAATGGCGGAAATCAGGCGAAAATCGGAGGTAATAACATGAAAATGAGGTTAAAATGGAGAGTGATGGGAGAGGAAGAACGAGCTGCAACTTTGCTTATGGCTCTTTCTTGTGGATCTGTATATGCCTGAAATGATTTTTTTTTTTTTTTTTTTGAGTTTTTGAGATTTATGATTTCTACAGTCTCTAACCTGTAACTGTAATGTAAGTGTATTTGCTTTCTTCAATGGATTTTGAGTCTCTTTTGTTCTGTAATTTTTTAGGGTTTTTTTTTCTTTTTTTTGTTGGGATGGAGAAGAAGAAGAAGATTCAATTTGTTTTTTCTTTTTTTGGGATTTGTGGGATGGGAGGTGTTGTTTTATTGATTTTAGTTAATTACTGATGGGGA CCGCGAATTTCTGTCGGTTCGATTCTCCATCTCCATCTTCTCCTCTTTCTTCGTGCCAACAACTGATCAATCTCAATCGTGATTTCATCTTTTTCCTTTTCCAAATTCGATCCATCTTCTCTTCCACTGTTGCAGTAATCTCTGTTCATCGCATTTTCTGATCCACTTTTGGTAATCGATTGCCTTTGTTCATCTGATCCACTTTGATCGGTGCATTTTTCTCCGTTTTCTTCGATTGCATGACTTCAATTCGTCTCTACCTCTTCCGATCGCCGTTCTCCACTTTCCGTTGCGAGTTCCGGTTCTTATTTTCTCGATTCCTCTCAGATCTCTGAGATTTCTTCTAAAAAACGATGGATCTGGTGGAGGAAAGATCGGAGTTCAAGAACGCTGGAAAATCGCCGGCGGCGGAAAGATCGGAGTTCGAGAGCGCCGGAAAATCGTTAGCGGCGGAATGTGAGCGAAGTGTGAAGATCTGCGCCGATTGCGGCACGGCGAAGACTCCTCTCTGGCGCGGAGGTCCAGCCGGTCCTAAGTCTCTATGCAATGCGTGTGGGATCAGAAGCAGGAAGAAGAGGAAACCAGTGGTAGGGCTAAACAGAGGCGGAGAAGTGGAGAGAAAAAGCAACAGAATCATCAATGGCGGAAATCAGGCGAAAATCGGAGGTAATAACATGAAAATGAGGTTAAAATGGAGAGTGATGGGAGAGGAAGAACGAGCTGCAACTTTGCTTATGGCTCTTTCTTGTGGATCTGTATATGCCTGAAATGATTTTTTTTTTTTTTTTTTTGAGTTTTTGAGATTTATGATTTCTACAGTCTCTAACCTGTAACTGTAATGTAAGTGTATTTGCTTTCTTCAATGGATTTTGAGTCTCTTTTGTTCTGTAATTTTTTAGGGTTTTTTTTTCTTTTTTTTGTTGGGATGGAGAAGAAGAAGAAGATTCAATTTGTTTTTTCTTTTTTTGGGATTTGTGGGATGGGAGGTGTTGTTTTATTGATTTTAGTTAATTACTGATGGGGA ATGGATCTGGTGGAGGAAAGATCGGAGTTCAAGAACGCTGGAAAATCGCCGGCGGCGGAAAGATCGGAGTTCGAGAGCGCCGGAAAATCGTTAGCGGCGGAATGTGAGCGAAGTGTGAAGATCTGCGCCGATTGCGGCACGGCGAAGACTCCTCTCTGGCGCGGAGGTCCAGCCGGTCCTAAGTCTCTATGCAATGCGTGTGGGATCAGAAGCAGGAAGAAGAGGAAACCAGTGGTAGGGCTAAACAGAGGCGGAGAAGTGGAGAGAAAAAGCAACAGAATCATCAATGGCGGAAATCAGGCGAAAATCGGAGGTAATAACATGAAAATGAGGTTAAAATGGAGAGTGATGGGAGAGGAAGAACGAGCTGCAACTTTGCTTATGGCTCTTTCTTGTGGATCTGTATATGCCTGA MDLVEERSEFKNAGKSPAAERSEFESAGKSLAAECERSVKICADCGTAKTPLWRGGPAGPKSLCNACGIRSRKKRKPVVGLNRGGEVERKSNRIINGGNQAKIGGNNMKMRLKWRVMGEEERAATLLMALSCGSVYA Homology
BLAST of Sed0027633 vs. NCBI nr
Match: XP_022138518.1 (GATA transcription factor 16-like [Momordica charantia]) HSP 1 Score: 162.2 bits (409), Expect = 3.3e-36 Identity = 95/151 (62.91%), Postives = 109/151 (72.19%), Query Frame = 0
BLAST of Sed0027633 vs. NCBI nr
Match: XP_023548663.1 (GATA transcription factor 16-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 155.2 bits (391), Expect = 4.0e-34 Identity = 92/151 (60.93%), Postives = 106/151 (70.20%), Query Frame = 0
BLAST of Sed0027633 vs. NCBI nr
Match: XP_022959167.1 (GATA transcription factor 16-like [Cucurbita moschata] >KAG7013665.1 GATA transcription factor 15 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 154.5 bits (389), Expect = 6.8e-34 Identity = 91/151 (60.26%), Postives = 106/151 (70.20%), Query Frame = 0
BLAST of Sed0027633 vs. NCBI nr
Match: XP_038875288.1 (GATA transcription factor 16-like [Benincasa hispida]) HSP 1 Score: 154.5 bits (389), Expect = 6.8e-34 Identity = 88/135 (65.19%), Postives = 100/135 (74.07%), Query Frame = 0
BLAST of Sed0027633 vs. NCBI nr
Match: XP_004150081.1 (GATA transcription factor 16 [Cucumis sativus] >KGN47402.1 hypothetical protein Csa_022928 [Cucumis sativus]) HSP 1 Score: 152.5 bits (384), Expect = 2.6e-33 Identity = 86/136 (63.24%), Postives = 100/136 (73.53%), Query Frame = 0
BLAST of Sed0027633 vs. ExPASy Swiss-Prot
Match: Q9FJ10 (GATA transcription factor 16 OS=Arabidopsis thaliana OX=3702 GN=GATA16 PE=2 SV=1) HSP 1 Score: 98.6 bits (244), Expect = 5.8e-20 Identity = 58/111 (52.25%), Postives = 70/111 (63.06%), Query Frame = 0
BLAST of Sed0027633 vs. ExPASy Swiss-Prot
Match: Q9LIB5 (GATA transcription factor 17 OS=Arabidopsis thaliana OX=3702 GN=GATA17 PE=2 SV=1) HSP 1 Score: 95.1 bits (235), Expect = 6.4e-19 Identity = 63/187 (33.69%), Postives = 83/187 (44.39%), Query Frame = 0
BLAST of Sed0027633 vs. ExPASy Swiss-Prot
Match: Q8LG10 (GATA transcription factor 15 OS=Arabidopsis thaliana OX=3702 GN=GATA15 PE=2 SV=2) HSP 1 Score: 89.4 bits (220), Expect = 3.5e-17 Identity = 63/132 (47.73%), Postives = 81/132 (61.36%), Query Frame = 0
BLAST of Sed0027633 vs. ExPASy Swiss-Prot
Match: Q8LC59 (GATA transcription factor 23 OS=Arabidopsis thaliana OX=3702 GN=GATA23 PE=2 SV=2) HSP 1 Score: 79.0 bits (193), Expect = 4.8e-14 Identity = 46/101 (45.54%), Postives = 68/101 (67.33%), Query Frame = 0
BLAST of Sed0027633 vs. ExPASy Swiss-Prot
Match: Q6YW48 (Protein CYTOKININ-RESPONSIVE GATA TRANSCRIPTION FACTOR 1 OS=Oryza sativa subsp. japonica OX=39947 GN=CGA1 PE=2 SV=1) HSP 1 Score: 73.6 bits (179), Expect = 2.0e-12 Identity = 30/47 (63.83%), Postives = 35/47 (74.47%), Query Frame = 0
BLAST of Sed0027633 vs. ExPASy TrEMBL
Match: A0A6J1CD73 (GATA transcription factor 16-like OS=Momordica charantia OX=3673 GN=LOC111009666 PE=4 SV=1) HSP 1 Score: 162.2 bits (409), Expect = 1.6e-36 Identity = 95/151 (62.91%), Postives = 109/151 (72.19%), Query Frame = 0
BLAST of Sed0027633 vs. ExPASy TrEMBL
Match: A0A6J1H3T1 (GATA transcription factor 16-like OS=Cucurbita moschata OX=3662 GN=LOC111460239 PE=4 SV=1) HSP 1 Score: 154.5 bits (389), Expect = 3.3e-34 Identity = 91/151 (60.26%), Postives = 106/151 (70.20%), Query Frame = 0
BLAST of Sed0027633 vs. ExPASy TrEMBL
Match: A0A0A0KG76 (GATA-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G312540 PE=4 SV=1) HSP 1 Score: 152.5 bits (384), Expect = 1.3e-33 Identity = 86/136 (63.24%), Postives = 100/136 (73.53%), Query Frame = 0
BLAST of Sed0027633 vs. ExPASy TrEMBL
Match: A0A5D3BXI1 (GATA transcription factor 16-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold46G00160 PE=4 SV=1) HSP 1 Score: 150.2 bits (378), Expect = 6.2e-33 Identity = 85/136 (62.50%), Postives = 99/136 (72.79%), Query Frame = 0
BLAST of Sed0027633 vs. ExPASy TrEMBL
Match: A0A1S3C8C2 (GATA transcription factor 16-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103497809 PE=4 SV=1) HSP 1 Score: 150.2 bits (378), Expect = 6.2e-33 Identity = 85/136 (62.50%), Postives = 99/136 (72.79%), Query Frame = 0
BLAST of Sed0027633 vs. TAIR 10
Match: AT5G49300.1 (GATA transcription factor 16 ) HSP 1 Score: 98.6 bits (244), Expect = 4.1e-21 Identity = 58/111 (52.25%), Postives = 70/111 (63.06%), Query Frame = 0
BLAST of Sed0027633 vs. TAIR 10
Match: AT3G16870.1 (GATA transcription factor 17 ) HSP 1 Score: 95.1 bits (235), Expect = 4.6e-20 Identity = 63/187 (33.69%), Postives = 83/187 (44.39%), Query Frame = 0
BLAST of Sed0027633 vs. TAIR 10
Match: AT3G06740.1 (GATA transcription factor 15 ) HSP 1 Score: 89.4 bits (220), Expect = 2.5e-18 Identity = 63/132 (47.73%), Postives = 81/132 (61.36%), Query Frame = 0
BLAST of Sed0027633 vs. TAIR 10
Match: AT4G16141.1 (GATA type zinc finger transcription factor family protein ) HSP 1 Score: 85.1 bits (209), Expect = 4.7e-17 Identity = 65/192 (33.85%), Postives = 85/192 (44.27%), Query Frame = 0
BLAST of Sed0027633 vs. TAIR 10
Match: AT5G26930.1 (GATA transcription factor 23 ) HSP 1 Score: 79.0 bits (193), Expect = 3.4e-15 Identity = 46/101 (45.54%), Postives = 68/101 (67.33%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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