Sed0027624 (gene) Chayote v1

Overview
NameSed0027624
Typegene
OrganismSechium edule (Chayote v1)
DescriptionCoatomer subunit zeta
LocationLG05: 30821957 .. 30827666 (-)
RNA-Seq ExpressionSed0027624
SyntenySed0027624
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GATAATATTGTCCTCGACGTAGATACGCTATTGTAATTCTAGAACCACGTTCCACTTTCTCTTTTGCCAAACAAACTGTAATTGGTGCCTCGCAGAAAAAAGGGAAAAAGAAAAAAAAGTTCGAGAGAAAATCTTGGATCGTTAGATTGATTCCGGGTCTTCGAATTTTCTCGGCGGCCAAACGCTCTTATCCAGTTTTTTCCCCTTCAGAAATTCCGATCGAACAGTTCGGAAGTTGACGGCGAAAGTTCAGGCATGTTGCTCGCCGTGCTGATCGCCAACTCCGTCGGCAACATTCTCGTCGAACGGTACCGTTTTCATTTCCCTTACGCTGTTTGATTTCGTCGATTGAGCTTTTTTTTTTTTTTTACATAGCATTTGTATGTTTCTGATGTGCGTTAGCCGGAAATTTCGAATTGAGTGGTTTTGTTGTGCAATCGATCGATTTGTTGAAGTATTCTGTGCCGATTGATTTGATGATTATGTGAAATGTGCGATTACCTTCAGATATGCTTCGATCAGAGCAGAATTTAGCTCGAGAATTTTTAATTTCCCTTGCGCTGTTTGATTTGATGGATTGAGCAAATTTTTCACTGAATTTGTATGTTTCTGATGTGGAAAGTTTGAATGGAATGGTTTTGCTGTGTAATTGATCGTTTTGTTGTAGTTTTCTGTGCTGATTGATTTGATGATTGTGTGAAATGTGCGATTAGCTTCGGTTATAACTCCGATTAGATTAGAATTTGGCTCAAGAATTTTTCATTTCCCTTGCGCTGTTTGATTTTATCGATTTAGCATTTTTCTTTCGTACTTGAATGGTTTTGTTGTGTAATTGATCGATTTGTTATAGCTTTCTATGCCGATTGCTTTGATGATTGTGTGAAATGTGCTATTAGCTTCAGATGTACTATGATGAGAATAGAATTTGGCTCAAGAATATTTCATTTCCCTTACGCTGTTTGATTCTATCGATTGAGCATTTTTTTTCACAGAATTTGTATGTTTCTAATGTGCATTTGCGGGAAAGTTTGAATGGAATGGTTTTGCTGTGTAATTGATCGTTTTGTTGTAGTTTTCTGTGGTGTTTTGCTTTGATGATTGTGTGAAATGTGCAATTAGCTTCAGATGTACTATGATGAGAATAGAATTTGGCTTAAGAATTTAGTGTTTATGAATGAAATGATGCTGGATTAGTCGGATAGCAGTGAATCTATTCTTATTGGATTAACTTTTGAGTTCGTTTGTTTAGGAATTTTTGGCTATCTAATTCCATGCGATTGTTCGGTTGATTGTGATTTTTATTATCTTATTAGGTTTCATGGAGTTCCGGCAGAGGAGCGATTGCATTGGCGATCCTTTCTAGTGAAGCTGGGAGCGGATAATCTCAAAGGTGCCAAGAATGAAGAGCTCTATGTTGCTTCACACAAGTGAGTTGAACCTTTTGAGCAGTTTTTAGTGCCAATCATTATAATTGAAAAATATTTATTTTCAACAAATGAGAAGAGTTTGGTTAAAATGCCTTGACTTTGTTCCATTTTGATCCATGGACTTTCAAATGTCCAATTTTTATCTATGATAAACTTGAAGTTAATATAAATCTAAATTGGTTGAATAATTACTAAAAGAAAATACAAAGTATAAACGTATGTGGTATTTTTTTTTAAAAGATAGTTTAACTAAAAAAAATTTCACAATGACCAATTTTGAGTTTTAGGTACTAAATTTAGTATTTGAAAGTTAAGGAACCAAAATGGAACGAACCTGAAAGTCGAGGAACTAAAATTGGACATTTGAAAGTCCAGGAACTAATATGGAACAAATCGAAAAATCGGTATCTAAACTGAAGAGTTTTCATTTTGATTGTTCTTCCTTCATAGTTTCAGTGGGTGGTACCGATTATTTGATTTCCCCCACTCTAGGGTGAAAAGGAGAAACTCAAAGACTACAATTTCTTCCATTGAGCTTCCTCCTCTAGTATTTTGACCTCATCTGAAATATAAGGACTTTGACTATAAGTCTATAACTGTTTCAAATACACAAGTGAAATGGGTGTGGGTTGTCCCCAGCTCTTGGCATGTAGTGGATCAAAGTTTCGATTCTTTGGTTATAAAAAATAAATGCACAAGGGAAATGGATGAATTTTATTTGTCTTATCATTGTTATAATATGTTTTTTGGGGGGAAATAGATAAAAACCAACTTTCATTCCTTCATGAAAGAGTTATAATGTTTTACTATTGTGATTCTGGCAATAATATATGAAGCTCCATATTGATATTAGTTTTTGCATGTTTAATATTCCGTTATTGGACTACTGCAACCAAAACAACCATGATTCTTAAGATCAAAAAAATAATAAAGATAAGTATATCTAATGTTTTGAAGTGAACTAACTAAAAAGCTGCATTGATTTTGAATTTTAAACTGTTTTAAGAATCAAGCTTAAAATTGAGAGACAGTAAGCTGGTAGTTGCCAAAGGCATCTTTCCATGAATTTAATACTTGGAATGAAATGCATAAACTGTTTTCCTGCTAAATAAAATACGCCCCTCTCCTAATTTGCACATTCCCTTCGATAATTCATCTTTATTATTTTATTTTATCAATAGACTCCCCTGCTTATAAGGGTATTTTAAATAAATAGGGTTAGCCAGTGTCTGAATAAGAGTCAACCTTTCCAATTAATTTATATATTTTTTATACCCGTGACTATTCGGACTAGCTTGTGCGCATCTCGACTAATGTCACGGTGCATACCACATGACCATTCAACATTCAGATGTCAAGAACCTTGTAATTTTTAGGTTGGTGACCACCATAGATTGAACCTATCTCTTCTTAGCTTCTCAAGATCTTTTTGAGTACTAGGTCACTCCATGATGGTTAACCTTTCTCGTTATCAATGTAAGCATTTCTGATAAATTACACCAATCAGCTCCTTTCTATTCTGTGGCACTGCTCATTTGGTTATTTACTTTAGTTAGTTTTTGTTTTTATCAGTTAAATTTGTTCAGCTTTCTGTAACAGGTCGGTATACATTGTTTACACCGTGCTCGGCGATGTTGCAGTTTATGTTGTTGGGAAGGATGAATATGATGAATTATCTTGTAAGTAAATACAATTTTTTTTTTCGTTCTGGCACTCAATTCCTTCTCTCTCCCTCACCCTCCATATAATTAAAAGGAAAATTTATCTTTTTAGTCATTAGGTTGGAGTCTAGTTTCTATGTTTCAAATTAAACAGTTTTATTCTAGACATTCTCAATTTTGGTCATCATGTGTCTTTTGAGTTTACTTTAATATTTATTTTTTTCTTAAAAATTAAATTTACATCAAAACTAAAATGACTACTTCATCAATATATTAAAATTTAAAATTAGAATAATCATTATCTTAGTCAACATTTCCTTATATAACTATTCAAATTTGGAGCATTATTGAAATGAAATGTCAATTTTTTTTTTTCCATTTTGGGGCTCAATTCCTTTTCTCACTCCCCACCTTCCTTATATTTGAAGTCTCTTTTTATTCTCTATCTTTCAAATGAAACCTTTTTACTTTTGACATTTTAATAAGAGGACAATTTAGGTGTAGTCATGGCTGCACCCCACTCATGATGTCACACACACATTTTAATATTTTTTATTAAAAAAAAAAAGTGAATTGAGATGTGTGGCACCAAAAGTGCCACATATGTTGACATTATGGGTGCAGTGCAGCCATGGCTGCACCCAAATTGCCCTCTTTTAATAATACTCTAACTTTAGTCATTTTGTGTTATATTGAAATTTAAAATTAGAATAGTCATTATTTTGGTCAAACACTTCATCATGTAACTAAGGATTTTATTATTTCAAGGCTAAAATTGAGCAATTGAACACTATTAAAATGTTCTATGTTTCAAAATAACCAACACTCAAAACCTAGGGACTAAGAGATGTAATTTTCCGCCAACAATATTATACCTAATAATCATAAGGTCTTGGGTTCAAGTCCCCCACCCTCCAATTGATGTAATCTCAAAAAAATAAAATACAATTTTCCTAATTAAAATTAAAATGTTTTCTTTTTTGATATTTTTTTGTGTTAATGTCATTTGCTCTTGTTCAAGTGTCAGAAGTGATCTTTGTTATAACATCATCGATAAAGGATGCATGTGGGAAAGTTCCAACCGAGCGATTGTTTCTTGACAAATATGGAAAGATCTGTTTGTGTCTTGATGAAATTGTCTGGACGGTAAGTCTTTTCTTCTTTCCTTCACTCAGAGTTATTTCTTTCCTTTAGGTTTTGTGGCTGAGCTGGCAAAATTAAAGTAATGGGGATCTTGCTTATAATCCAGCTATAGATTTAGTGATAGACATGTTAGAAACTTGTTATGGCATATTAAAAAATACGAGATTTCATCTGAAAATTAATTGACAATAAGAGAAGTAGCATATTTATCTAATAAAAGTTGTTAGGTTTTCTCATTTTTTTCATTGTAGGATCTTCAACATGCTCCCTCAAGATCATTCTTCCTTGAGTTCACTATCTCTAGAAGAGATATTTTTTTATTGGATCGAATATCCAATTGAATTTAATGTGCTTTGATACCATATTATACAACATGAGGTTTTATCTTAAAACCAATTAGCAATGAGAAAAATATCTTAGGTATGTTATAAGTATTGTAAGGTTATTATTTTATGCATTTGTGCGTGTCAATGTATATGCACCTCGACTATTCTTACCATCTGACCTTACAACATTTTGTTGTAAAAAAGATTCATAAGAAATTAATTTCTGGGTAGGTGGTCACCATGAATTTGACCTATAGCATTTTAGATTTTTAACGCTCTCTTCAACCACTAAGTCATTTCATGATGATTCTCACCTTTCCAACGTGGGATTCTCAAGAAAGGTACAATTGAGAATAGAAAAAAGTTATTCACTTGGATTTTTCATTTCTAAGTTTTTTTACTCGTAATTTTCAATTTAGATCAAAAGACTTTTACGTAGGTTTCTTGTTTTCCCAGAAAACAAAAAAATGCTATGCGAAATGTCTTTCTTTGAATAGAAATTTGGCCATATTTAAATGGTAAGATATTATGAATTCAATTTAAGGTGACAACCTATATAAAAATTAATTTTCTATAAAGTTTTTGACAACCAAATATTATAGATAGATCATATAGTTGTTCCGCAGTCGAGATGCAAACACTCACATAGATCACATAGTTTGGACCTTAATGATTTGTTTGATGTTTGTAAAGGGCATCTTGGAGAATACGGATAAAGACACGATCAAGAGGCTGATAAGGCTAAAGCCTCCAAATGAGTTTTGATTAATGAAACGGCTGCTTCTCCTCTCAGTCATCCACAATCCTATGTAATCGTCATCGATCAATAAGTTTACTGTACTCCTAATGTTTTTTTGGCTCCTATCATTCATTTTCGGACCTGTTCGGTTTTCGGGTTAGAACGCAAAGTTGTAAACTATTCAAGGGATTGTTTGGATTAAGATTTTCCTGGTGGTAGGAAGTTTGAAAATACATACTACTGTGTAATTATGGAGTAAATTTGTAGTTTTATTTTTATTTTTATTTTTGAGAAACGGAGTAAATTTGTAGTTGGAGAACTAGAGGTTAGTGGTTGAAGTATTATACTGTTCTCGACTTCTATGGTAAAAATATTGTCAGCTACAATTGGTAAATTAAAAAAAAATTATCTTAC

mRNA sequence

GATAATATTGTCCTCGACGTAGATACGCTATTGTAATTCTAGAACCACGTTCCACTTTCTCTTTTGCCAAACAAACTGTAATTGGTGCCTCGCAGAAAAAAGGGAAAAAGAAAAAAAAGTTCGAGAGAAAATCTTGGATCGTTAGATTGATTCCGGGTCTTCGAATTTTCTCGGCGGCCAAACGCTCTTATCCAGTTTTTTCCCCTTCAGAAATTCCGATCGAACAGTTCGGAAGTTGACGGCGAAAGTTCAGGCATGTTGCTCGCCGTGCTGATCGCCAACTCCGTCGGCAACATTCTCGTCGAACGGTTTCATGGAGTTCCGGCAGAGGAGCGATTGCATTGGCGATCCTTTCTAGTGAAGCTGGGAGCGGATAATCTCAAAGGTGCCAAGAATGAAGAGCTCTATGTTGCTTCACACAAGTCGGTATACATTGTTTACACCGTGCTCGGCGATGTTGCAGTTTATGTTGTTGGGAAGGATGAATATGATGAATTATCTTTGTCAGAAGTGATCTTTGTTATAACATCATCGATAAAGGATGCATGTGGGAAAGTTCCAACCGAGCGATTGTTTCTTGACAAATATGGAAAGATCTGTTTGTGTCTTGATGAAATTGTCTGGACGGGCATCTTGGAGAATACGGATAAAGACACGATCAAGAGGCTGATAAGGCTAAAGCCTCCAAATGAGTTTTGATTAATGAAACGGCTGCTTCTCCTCTCAGTCATCCACAATCCTATGTAATCGTCATCGATCAATAAGTTTACTGTACTCCTAATGTTTTTTTGGCTCCTATCATTCATTTTCGGACCTGTTCGGTTTTCGGGTTAGAACGCAAAGTTGTAAACTATTCAAGGGATTGTTTGGATTAAGATTTTCCTGGTGGTAGGAAGTTTGAAAATACATACTACTGTGTAATTATGGAGTAAATTTGTAGTTTTATTTTTATTTTTATTTTTGAGAAACGGAGTAAATTTGTAGTTGGAGAACTAGAGGTTAGTGGTTGAAGTATTATACTGTTCTCGACTTCTATGGTAAAAATATTGTCAGCTACAATTGGTAAATTAAAAAAAAATTATCTTAC

Coding sequence (CDS)

ATGTTGCTCGCCGTGCTGATCGCCAACTCCGTCGGCAACATTCTCGTCGAACGGTTTCATGGAGTTCCGGCAGAGGAGCGATTGCATTGGCGATCCTTTCTAGTGAAGCTGGGAGCGGATAATCTCAAAGGTGCCAAGAATGAAGAGCTCTATGTTGCTTCACACAAGTCGGTATACATTGTTTACACCGTGCTCGGCGATGTTGCAGTTTATGTTGTTGGGAAGGATGAATATGATGAATTATCTTTGTCAGAAGTGATCTTTGTTATAACATCATCGATAAAGGATGCATGTGGGAAAGTTCCAACCGAGCGATTGTTTCTTGACAAATATGGAAAGATCTGTTTGTGTCTTGATGAAATTGTCTGGACGGGCATCTTGGAGAATACGGATAAAGACACGATCAAGAGGCTGATAAGGCTAAAGCCTCCAAATGAGTTTTGA

Protein sequence

MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYIVYTVLGDVAVYVVGKDEYDELSLSEVIFVITSSIKDACGKVPTERLFLDKYGKICLCLDEIVWTGILENTDKDTIKRLIRLKPPNEF
Homology
[Close]
BLAST of Sed0027624 vs. NCBI nr
Match: XP_008466411.1 (PREDICTED: uncharacterized protein LOC103503824 [Cucumis melo] >TYK31432.1 SNARE-like superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 287.3 bits (734), Expect = 7.2e-74
Identity = 141/147 (95.92%), Postives = 145/147 (98.64%), Query Frame = 0 

Query: 1   MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYI 60
           MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYI
Sbjct: 1   MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYI 60

Query: 61  VYTVLGDVAVYVVGKDEYDELSLSEVIFVITSSIKDACGKVPTERLFLDKYGKICLCLDE 120
           VYTVLGDVAVYVVGKDEYDEL+L+EVIFVITS+IKDACGK PTERLFLDKYGKICLCLDE
Sbjct: 61  VYTVLGDVAVYVVGKDEYDELALAEVIFVITSAIKDACGKAPTERLFLDKYGKICLCLDE 120

Query: 121 IVWTGILENTDKDTIKRLIRLKPPNEF 148
           IVWTGILENT+KD IKRLIRLKPPNEF
Sbjct: 121 IVWTGILENTEKDRIKRLIRLKPPNEF 147

[Close]
BLAST of Sed0027624 vs. NCBI nr
Match: KAA0038809.1 (SNARE-like superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 287.0 bits (733), Expect = 9.5e-74
Identity = 140/147 (95.24%), Postives = 145/147 (98.64%), Query Frame = 0 

Query: 1   MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYI 60
           MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYI
Sbjct: 1   MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYI 60

Query: 61  VYTVLGDVAVYVVGKDEYDELSLSEVIFVITSSIKDACGKVPTERLFLDKYGKICLCLDE 120
           VYTVLGD+AVYVVGKDEYDEL+L+EVIFVITS+IKDACGK PTERLFLDKYGKICLCLDE
Sbjct: 61  VYTVLGDIAVYVVGKDEYDELALAEVIFVITSAIKDACGKAPTERLFLDKYGKICLCLDE 120

Query: 121 IVWTGILENTDKDTIKRLIRLKPPNEF 148
           IVWTGILENT+KD IKRLIRLKPPNEF
Sbjct: 121 IVWTGILENTEKDRIKRLIRLKPPNEF 147

[Close]
BLAST of Sed0027624 vs. NCBI nr
Match: XP_038896955.1 (TSET complex member tstD [Benincasa hispida])

HSP 1 Score: 286.6 bits (732), Expect = 1.2e-73
Identity = 141/147 (95.92%), Postives = 145/147 (98.64%), Query Frame = 0 

Query: 1   MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYI 60
           MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYI
Sbjct: 1   MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYI 60

Query: 61  VYTVLGDVAVYVVGKDEYDELSLSEVIFVITSSIKDACGKVPTERLFLDKYGKICLCLDE 120
           VYTVLGDVAVYVVGKDEYDEL+L+EVIFVITS+IKDACGK PTERLFLDKYGKICLCLDE
Sbjct: 61  VYTVLGDVAVYVVGKDEYDELALAEVIFVITSAIKDACGKSPTERLFLDKYGKICLCLDE 120

Query: 121 IVWTGILENTDKDTIKRLIRLKPPNEF 148
           IVWTGILENT+KD IKRLIRLKPPNEF
Sbjct: 121 IVWTGILENTEKDRIKRLIRLKPPNEF 147

[Close]
BLAST of Sed0027624 vs. NCBI nr
Match: XP_022134177.1 (uncharacterized protein LOC111006502 [Momordica charantia])

HSP 1 Score: 286.2 bits (731), Expect = 1.6e-73
Identity = 141/147 (95.92%), Postives = 144/147 (97.96%), Query Frame = 0 

Query: 1   MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYI 60
           MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYI
Sbjct: 1   MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYI 60

Query: 61  VYTVLGDVAVYVVGKDEYDELSLSEVIFVITSSIKDACGKVPTERLFLDKYGKICLCLDE 120
           VYTVLGDVAVYVVGKDEYDEL+L+EVIFVITSSIKDACGK PTERLFLDKYGKICLCLDE
Sbjct: 61  VYTVLGDVAVYVVGKDEYDELALAEVIFVITSSIKDACGKAPTERLFLDKYGKICLCLDE 120

Query: 121 IVWTGILENTDKDTIKRLIRLKPPNEF 148
           IVWTGILENT+KD IKRLIRLKPP EF
Sbjct: 121 IVWTGILENTEKDRIKRLIRLKPPTEF 147

[Close]
BLAST of Sed0027624 vs. NCBI nr
Match: XP_022936551.1 (uncharacterized protein LOC111443125 [Cucurbita moschata] >XP_022976214.1 uncharacterized protein LOC111476670 [Cucurbita maxima] >KAG6591575.1 TSET complex member tstD, partial [Cucurbita argyrosperma subsp. sororia] >KAG7024463.1 hypothetical protein SDJN02_13278 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 284.3 bits (726), Expect = 6.1e-73
Identity = 139/147 (94.56%), Postives = 144/147 (97.96%), Query Frame = 0 

Query: 1   MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYI 60
           MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEEL+VASHKSVYI
Sbjct: 1   MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELFVASHKSVYI 60

Query: 61  VYTVLGDVAVYVVGKDEYDELSLSEVIFVITSSIKDACGKVPTERLFLDKYGKICLCLDE 120
           VYTVLGDVAVYVVGKDEYDEL+L+EVIFV+TSSIKDACGK PTER FLDKYGKICLCLDE
Sbjct: 61  VYTVLGDVAVYVVGKDEYDELALAEVIFVVTSSIKDACGKAPTERSFLDKYGKICLCLDE 120

Query: 121 IVWTGILENTDKDTIKRLIRLKPPNEF 148
           IVWTGILENT+KD IKRLIRLKPPNEF
Sbjct: 121 IVWTGILENTEKDRIKRLIRLKPPNEF 147

[Close]
BLAST of Sed0027624 vs. ExPASy Swiss-Prot
Match: C0HLF1 (TSET complex member tstD OS=Dictyostelium discoideum OX=44689 GN=tstD PE=1 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 4.6e-15
Identity = 47/144 (32.64%), Postives = 81/144 (56.25%), Query Frame = 0 

Query: 1   MLLAVLIANSVGNILVERFH-GVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVY 60
           M+ ++LI N+ GNI+  +++  +  E++  +   L +   D    +KNE+  V       
Sbjct: 1   MINSLLITNNNGNIVFSKYYSNINDEKQSEYEKLLYQFTKDEWVNSKNEKHLVTEFSGYI 60

Query: 61  IVYTVLGDVAVYVVGKDEYDELSLSEVIFVITSSIKDACGKV-PTERLFLDKYGKICLCL 120
            V+T +GD+ +++ G +E DEL+LS+V F I  S+KD C K   TE+ F+++  K  L L
Sbjct: 61  TVFTNVGDLMLFLCGSEEMDELALSDVFFPIIESLKDICKKKGVTEQNFIEQIPKFILYL 120

Query: 121 DEIVWTGILENTDKDTIKRLIRLK 143
           DEI+  G L+    ++I+    LK
Sbjct: 121 DEIIQRGHLDQVQLESIQNYSSLK 144

[Close]
BLAST of Sed0027624 vs. ExPASy Swiss-Prot
Match: Q5NA06 (Coatomer subunit zeta-3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0838800 PE=2 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 2.5e-05
Identity = 34/131 (25.95%), Postives = 59/131 (45.04%), Query Frame = 0 

Query: 5   VLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYIVYTV 64
           +L+ +S G  +  +++          ++F   + A   K +   E  +    S ++VY  
Sbjct: 10  ILVLDSEGKRVAVKYYSDDWPSLSSKQAFEKSVFAKTQKTSARTEAEIVMFDSYFVVYKF 69

Query: 65  LGDVAVYVVGKDEYDELSLSEVIFVITSSIKDACGKVPTERLFLDKYGKICLCLDEIVWT 124
           + D+  +V G DE +EL L+ V+   + +I          R  L+    I LCLDE+V  
Sbjct: 70  IQDLHFFVTGGDEENELILASVLQGFSEAIDYLLRNKVHRRAALENLDLIFLCLDEVVDG 129

Query: 125 GILENTDKDTI 136
           GI+  TD   I
Sbjct: 130 GIVLETDAKAI 140

[Close]
BLAST of Sed0027624 vs. ExPASy Swiss-Prot
Match: Q54CA7 (Probable coatomer subunit zeta-B OS=Dictyostelium discoideum OX=44689 GN=copZb PE=3 SV=1)

HSP 1 Score: 47.4 bits (111), Expect = 1.7e-04
Identity = 41/139 (29.50%), Postives = 69/139 (49.64%), Query Frame = 0 

Query: 4   AVLIANSVGNILVERFHGVPAE--ERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYIV 63
           A+++ ++ G  L   F+  P      L  +    KL  +  K   N EL +  +K   ++
Sbjct: 10  AIIVLDNNGKRLCSCFYDPPGTPITPLTEKDKFEKLIFEKCK-TSNCELEIIDNK--VVI 69

Query: 64  YTVLGDVAVYVVGKD-EYDELSLSEVIFVITSSIKDACGK----VPTERLFLDKYGKICL 123
            +   DV ++VVG     +EL+L +V+  + S  K AC      + T++ FL+ Y  I L
Sbjct: 70  GSKQSDVWIFVVGNSLNSNELALLDVLNTLISLFKKACATDESIMITKKTFLENYALIRL 129

Query: 124 CLDEIVWTGILENTDKDTI 136
            +DEIV  GI+   D++TI
Sbjct: 130 YIDEIVSDGIIFEVDEETI 145

[Close]
BLAST of Sed0027624 vs. ExPASy TrEMBL
Match: A0A5D3E691 (Coatomer subunit zeta OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G007430 PE=3 SV=1)

HSP 1 Score: 287.3 bits (734), Expect = 3.5e-74
Identity = 141/147 (95.92%), Postives = 145/147 (98.64%), Query Frame = 0 

Query: 1   MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYI 60
           MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYI
Sbjct: 1   MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYI 60

Query: 61  VYTVLGDVAVYVVGKDEYDELSLSEVIFVITSSIKDACGKVPTERLFLDKYGKICLCLDE 120
           VYTVLGDVAVYVVGKDEYDEL+L+EVIFVITS+IKDACGK PTERLFLDKYGKICLCLDE
Sbjct: 61  VYTVLGDVAVYVVGKDEYDELALAEVIFVITSAIKDACGKAPTERLFLDKYGKICLCLDE 120

Query: 121 IVWTGILENTDKDTIKRLIRLKPPNEF 148
           IVWTGILENT+KD IKRLIRLKPPNEF
Sbjct: 121 IVWTGILENTEKDRIKRLIRLKPPNEF 147

[Close]
BLAST of Sed0027624 vs. ExPASy TrEMBL
Match: A0A1S3CRC6 (Coatomer subunit zeta OS=Cucumis melo OX=3656 GN=LOC103503824 PE=3 SV=1)

HSP 1 Score: 287.3 bits (734), Expect = 3.5e-74
Identity = 141/147 (95.92%), Postives = 145/147 (98.64%), Query Frame = 0 

Query: 1   MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYI 60
           MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYI
Sbjct: 1   MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYI 60

Query: 61  VYTVLGDVAVYVVGKDEYDELSLSEVIFVITSSIKDACGKVPTERLFLDKYGKICLCLDE 120
           VYTVLGDVAVYVVGKDEYDEL+L+EVIFVITS+IKDACGK PTERLFLDKYGKICLCLDE
Sbjct: 61  VYTVLGDVAVYVVGKDEYDELALAEVIFVITSAIKDACGKAPTERLFLDKYGKICLCLDE 120

Query: 121 IVWTGILENTDKDTIKRLIRLKPPNEF 148
           IVWTGILENT+KD IKRLIRLKPPNEF
Sbjct: 121 IVWTGILENTEKDRIKRLIRLKPPNEF 147

[Close]
BLAST of Sed0027624 vs. ExPASy TrEMBL
Match: A0A5A7TBS4 (Coatomer subunit zeta OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold92G003660 PE=3 SV=1)

HSP 1 Score: 287.0 bits (733), Expect = 4.6e-74
Identity = 140/147 (95.24%), Postives = 145/147 (98.64%), Query Frame = 0 

Query: 1   MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYI 60
           MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYI
Sbjct: 1   MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYI 60

Query: 61  VYTVLGDVAVYVVGKDEYDELSLSEVIFVITSSIKDACGKVPTERLFLDKYGKICLCLDE 120
           VYTVLGD+AVYVVGKDEYDEL+L+EVIFVITS+IKDACGK PTERLFLDKYGKICLCLDE
Sbjct: 61  VYTVLGDIAVYVVGKDEYDELALAEVIFVITSAIKDACGKAPTERLFLDKYGKICLCLDE 120

Query: 121 IVWTGILENTDKDTIKRLIRLKPPNEF 148
           IVWTGILENT+KD IKRLIRLKPPNEF
Sbjct: 121 IVWTGILENTEKDRIKRLIRLKPPNEF 147

[Close]
BLAST of Sed0027624 vs. ExPASy TrEMBL
Match: A0A6J1BYX2 (Coatomer subunit zeta OS=Momordica charantia OX=3673 GN=LOC111006502 PE=3 SV=1)

HSP 1 Score: 286.2 bits (731), Expect = 7.8e-74
Identity = 141/147 (95.92%), Postives = 144/147 (97.96%), Query Frame = 0 

Query: 1   MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYI 60
           MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYI
Sbjct: 1   MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYI 60

Query: 61  VYTVLGDVAVYVVGKDEYDELSLSEVIFVITSSIKDACGKVPTERLFLDKYGKICLCLDE 120
           VYTVLGDVAVYVVGKDEYDEL+L+EVIFVITSSIKDACGK PTERLFLDKYGKICLCLDE
Sbjct: 61  VYTVLGDVAVYVVGKDEYDELALAEVIFVITSSIKDACGKAPTERLFLDKYGKICLCLDE 120

Query: 121 IVWTGILENTDKDTIKRLIRLKPPNEF 148
           IVWTGILENT+KD IKRLIRLKPP EF
Sbjct: 121 IVWTGILENTEKDRIKRLIRLKPPTEF 147

[Close]
BLAST of Sed0027624 vs. ExPASy TrEMBL
Match: A0A6J1IMX0 (Coatomer subunit zeta OS=Cucurbita maxima OX=3661 GN=LOC111476670 PE=3 SV=1)

HSP 1 Score: 284.3 bits (726), Expect = 3.0e-73
Identity = 139/147 (94.56%), Postives = 144/147 (97.96%), Query Frame = 0 

Query: 1   MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYI 60
           MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEEL+VASHKSVYI
Sbjct: 1   MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELFVASHKSVYI 60

Query: 61  VYTVLGDVAVYVVGKDEYDELSLSEVIFVITSSIKDACGKVPTERLFLDKYGKICLCLDE 120
           VYTVLGDVAVYVVGKDEYDEL+L+EVIFV+TSSIKDACGK PTER FLDKYGKICLCLDE
Sbjct: 61  VYTVLGDVAVYVVGKDEYDELALAEVIFVVTSSIKDACGKAPTERSFLDKYGKICLCLDE 120

Query: 121 IVWTGILENTDKDTIKRLIRLKPPNEF 148
           IVWTGILENT+KD IKRLIRLKPPNEF
Sbjct: 121 IVWTGILENTEKDRIKRLIRLKPPNEF 147

[Close]
BLAST of Sed0027624 vs. TAIR 10
Match: AT1G15370.1 (SNARE-like superfamily protein )

HSP 1 Score: 254.6 bits (649), Expect = 4.8e-68
Identity = 117/146 (80.14%), Postives = 137/146 (93.84%), Query Frame = 0 

Query: 1   MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYI 60
           M+LAVL ANSVGN+L+ERF+GVPAEERLHWRSFLVKLGADNLKG KNEEL VA HKSVYI
Sbjct: 1   MILAVLFANSVGNVLIERFNGVPAEERLHWRSFLVKLGADNLKGVKNEELLVACHKSVYI 60

Query: 61  VYTVLGDVAVYVVGKDEYDELSLSEVIFVITSSIKDACGKVPTERLFLDKYGKICLCLDE 120
           VYT+LGDV++++VGKDEYDEL+L+E I++IT+++KD CGK PTER+FLDKYG+ICLCLDE
Sbjct: 61  VYTMLGDVSIFLVGKDEYDELALAETIYIITAAVKDVCGKPPTERVFLDKYGRICLCLDE 120

Query: 121 IVWTGILENTDKDTIKRLIRLKPPNE 147
           IVW G+LENTDKD IKRLIRLKPP+E
Sbjct: 121 IVWNGLLENTDKDRIKRLIRLKPPSE 146

The following BLAST results are available for this feature:
BLAST of Sed0027624 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008466411.17.2e-7495.92PREDICTED: uncharacterized protein LOC103503824 [Cucumis melo] >TYK31432.1 SNARE... [more]
KAA0038809.19.5e-7495.24SNARE-like superfamily protein [Cucumis melo var. makuwa][more]
XP_038896955.11.2e-7395.92TSET complex member tstD [Benincasa hispida][more]
XP_022134177.11.6e-7395.92uncharacterized protein LOC111006502 [Momordica charantia][more]
XP_022936551.16.1e-7394.56uncharacterized protein LOC111443125 [Cucurbita moschata] >XP_022976214.1 unchar... [more]
BLAST of Sed0027624 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
C0HLF14.6e-1532.64TSET complex member tstD OS=Dictyostelium discoideum OX=44689 GN=tstD PE=1 SV=1[more]
Q5NA062.5e-0525.95Coatomer subunit zeta-3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0838800... [more]
Q54CA71.7e-0429.50Probable coatomer subunit zeta-B OS=Dictyostelium discoideum OX=44689 GN=copZb P... [more]
BLAST of Sed0027624 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3E6913.5e-7495.92Coatomer subunit zeta OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold45... [more]
A0A1S3CRC63.5e-7495.92Coatomer subunit zeta OS=Cucumis melo OX=3656 GN=LOC103503824 PE=3 SV=1[more]
A0A5A7TBS44.6e-7495.24Coatomer subunit zeta OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold92... [more]
A0A6J1BYX27.8e-7495.92Coatomer subunit zeta OS=Momordica charantia OX=3673 GN=LOC111006502 PE=3 SV=1[more]
A0A6J1IMX03.0e-7394.56Coatomer subunit zeta OS=Cucurbita maxima OX=3661 GN=LOC111476670 PE=3 SV=1[more]
BLAST of Sed0027624 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G15370.14.8e-6880.14SNARE-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.450.60coord: 1..142
e-value: 2.6E-17
score: 65.1
NoneNo IPR availablePANTHERPTHR11043:SF19SUBFAMILY NOT NAMEDcoord: 3..147
IPR022775AP complex, mu/sigma subunitPFAMPF01217Clat_adaptor_scoord: 1..136
e-value: 3.9E-6
score: 26.9
IPR039652Coatomer subunit zetaPANTHERPTHR11043ZETA-COAT PROTEINcoord: 3..147
IPR011012Longin-like domain superfamilySUPERFAMILY64356SNARE-likecoord: 1..143

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0027624.1Sed0027624.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006886 intracellular protein transport
biological_process GO:0006891 intra-Golgi vesicle-mediated transport
biological_process GO:0006890 retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum
cellular_component GO:0030126 COPI vesicle coat
cellular_component GO:0000139 Golgi membrane