Sed0027535 (gene) Chayote v1

Overview


Name	Sed0027535
Type	gene
Organism	Sechium edule (Chayote v1)
Description	NAC domain-containing protein
Location	LG04: 30584178 .. 30590627 (+)
RNA-Seq Expression	Sed0027535
Synteny	Sed0027535

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACGGCAGTGGAAGAGGCGGCGGCAGTCACCGAAGCTCGAACGGGTACCTACCGCCGGGGTTTCGGTTCCATCCAACCGACGAAGAGCTGATCGCTCACTACCTTTTGAAGAAAGTACTTGACTCCCATTTCTCCTCGCCCGCCATTGCCCATGTCGACCTTAACAAGTCCGAGCCTTGGGACCTCCCTGGTCTCTCCTTTTTCCCTCTCTACTTTTTTTTATATGTTGAAAAATTAAATAGATATTCAAATTCGTAACCTCGTTTCTTAATTATATGCATTTGATTTATACTCTTTTGCTATTTTGTTTTATTTTTTTTCAATGAAATTAAATATTATATCTAGGATATTTAATTGACATAAATTAGTGTTAACGATTTTAAAATGACATAAATTGTGGGGAAAGGATTGCCTTAATGATTATATAAAATTGTTAAGCAAATGGGGCTCTAGCTTTCTCTTTTTAAATAGGTTTTAAGGTAAATTTTCAAAAGAAAAAGTTGAAAAAAAAAATTCAACGTAAAATAACTTTGAAAGAAAAAAGAACTTAATTTAATCTATGATACCACCTTTATAAAATTTAATATATTATCCTATCATCAAAATATATTACAGTTTTTTTTCGAAAACAAATGTATTAAATTTTGTTTAATTAGAAAAAAAATGAATTGTGATCGAATGTACATCGATGTCGTCGATCGTATCTTTTTCAAATATATATATTTTCAAAAGATGTCAAACTTTGTTCCGTGATTGTCAATGAAATTATTTGAAATATAATCAAGCTCAAACATTCACCAATATTTTTTAAAAAAATGAAGACATAATCATTTGAAATATAATATTTTCAACAAAGAATTTCCAAAATGAACCATCTTAATTTAAAAAAAATGTATTATCTTATGATTTTTTTTTTTAATGAAACCATAAGATTAATGAATGGAATGGAAATGGGATGACAGAGAAAGCAGCAATGGGAGAGAAAGAGTGGTATTTCTTCAGCCTACGAGACCGGAAATACCCGACCGGGCTGAGAACGAACCGGGCGACGGAAGCCGGGTACTGGAAAGCGACCGGAAAAGACCGTGAAATAAGCAGCTCGAAAACCAATCTTCTGGTCGGAATGAAAAAAACCCTGGTTTTTTACAAAGGCAGAGCTCCCAAAGGCCAAAAAACCAACTGGGTCATGCATGAATTTCGGCTCGCCGGAAAATTCGCTTACCATTTTCTCTCGACCGCTTCTTCCAAGGTTCTTTTTCTCTTTCTTTTTCTTTTTCTTTTTTTTTTTTGGTGGAGGATCACGACTTTGATAGTTTTTTTTTAGTACATATTGTGGGAGGGAGATAAATACCAATTCCCGAGCTCGAACGTTGGTGTCAAATTAATTTACAATCAGACAATGAAATTATTAAGCCACCGACCTATTCAGTTTAATAGTTAAAATTAATTATCATAAATATTTGGGATATTAAATTAAAATTTAGTCATATCAATGTCACCCACCTATGGCTGTTTCTATTTTAATTGCTTTCTTCCATTAATTAGAAAAAAAACAAAAGAGAAAATGAAAAACCCCATTTTGGTTTTTGTGTTTAATGTTGATTTAGCTGAGATTTTTGTTTTGTTTTTAAGGGAAAATGGACTTTTTTAGTCCTATATTTTAAAATTAAGTACTTTTATTCTTTATATTTCAACAATATTTAAATTGAATTATTTTGTTTTTTAAAATTTATTTTTGAAAAAGTGTCTAGAATTAATAAGCATTCTACCAATATATTAAAATTTAAAATTATTTTATTAATTATATTAGTCAACATTTTACTATGTAATTAAAGGTTTTGTTATTGAATGATGAGAATAGAACATTATTGATATATATATATTAAATGTCCTATTTTCATAAAATAATCATAAATATAGGTAAATTTTTAAATGTTTGTATTCATATTCATTAATACTTTGTGATAAATATTTATTAATACTTTTCTTTAAAAAAAATACTCATTAATATTAGTATATTGTATTATTAATTCTCATTAATATTAGCATTATAAGAAATGTGACCATTCTTATTAATATTAATAACTATATTTAGATTTTTTTTAAATTATTTTATAAATTTGACCGGTGAATTTTCCGAAAATTTAAAGTAAAATATTTCTTTTTGAGAAGTATAGACAAAATAAAAACAACACTGAAAAAGTATTTTTCCCTAGTTTTTAAGATTGTGGGTGATACTATTATAAACCAGCTTATATTTAAAATAAAAAAAGAGATTATTATAATAACCTAACCATTATCCTATCTCAGGAAAAAGAAAAAAAAAACTAAGAAATGAGTGTCAAAACTTGATTTCTTTTTCTAATAAGTTTCTTAATTTATTTTAGATATATACATTTGTGGGAACTAGAAGGGGATGTGTTGTTATTCCATTTCACCTTCATATTGGGATTCAACACTAGCGTCATAGGTTCGATCTCGAAAATCAATATTTGTCTCACTCTTTCGATATGTACTTAAAAAAAAGAAAAAAGAAACGCAAATGTATAACTTTTTGAAAACATCTAATATGGAGATTAAAAAAAATAATAATAAAACTATAGAACACTAACTTTCTTACTAAAAACATGCCTTCTTTATTATAACACTCCAAATGCTTGAGTATAGTCATGATAAAACGTATTCATCGAATAATTGATTACCAACAAAGTAGGCATAATTTAACAATTGTTAATACATATTCTCAATTATAATATTAATAATTTGGATCGTTAGTTGTTAATTTCAAATCGATGTAGTAAGAAAAAAAAACAATCTTTTTTATTTTGAATAATTTCATAAAAGTATGCATAGACAATAAATGCTAAAAAAACCACTAATTATCTTGAATTGGTTTACTAGTCAAATAGAATTTTGAAGATTTAAAAATTTAGACTTCAATGTATGGAATTATTATTTAGAAATTTTATATGGATCTTTTAAAGGGCGATTCTCATAAAAATAATTTAAAGGCATACATTATATGTTTATAAATAAAAAAAAGTTATTTAAAAAAAACAATGTTCAACTTGGTGAAGTATAATGAAAGACTTTTATGTACATGCATTATAATATAATATTTCAATGCATTTATTATACATATACATTATTTTGATGGAGGACCAAATTTCAGTGTGGACTGGTTTTAATGTTTGAGAATAATAACTTCATAAATGAAATTTATGTTTTGTGTCTCACCCCATTTATTTTCCTCATTAATTATAGACCTCTTTTTGAGTAATGGGTATTCATTCAATCACTTTACTTATTTTGTTCTTTTTGAATTTTTGAATCCCCATCCATAAATAAAGGATAAATTTATTCTCAAATAAAAAAAGAGTAATTCAAGAGAAAAAAAAAATAATAAATGTGGGTAAGATTAGAAAAAAGCTAAATGTGGGTAAGATTTACTACATTTCTTTAGAGTATAAAACTATTTCTAAATAATCATATACTTCAATCCTTCCTATATAAAACATTATCCAAACATCTTACATATAACTATATCTCAATATGATTTTTGTGTAATCACCTATTTAAATATTTTTATTATTTTTTTTTACAAATTCTTCTAATAACTTTGTCAATTGATTTTCTTCCGACCATTCATTTAAACATCACATTTAAAACCATTCCTTTTCTCCCTTCTACTTATCTTTCCCATCCAAACATTCAAACATGCTTATAAGCGTTTTATTGTTTTATTTATATTTTAAAAAGTTAAGTCACGATTTAAAAACTACGTTATTGGATAATCATAAGATTTTAGTTAATAATAATAATCATTTTTATTTTTTAATTTTGTTTAGTTTTCTTATTATTTTTTTTAAATATTAAAATAAAATAAAAATAGTAGTCAACAACATTAACGTATATTTAATGACTAAAATGTCATAAATTTAACTATCTCAAATGGTATAGAACTAAAATAAACATTATGTTTCCAAATTTATAAAATAAGTTTTTCTTTATAATCAAAAGCAATCTTTTATGTAGTTTTTTTCAAATTTTGGATTGTGTAAAGAAAATGTTGAATAACTGAAGAACATGCTAAACACAAAATTGAAAGATTAAATGCATAATATACACTTTTTATAAAGTCTTCGACCAAATAAAGACATCAATCTCTAGTCATTAATTTTTTTAATTCAACAACACAATTATAATTAATTTGGGAGATTCCAATTCATTAATTCTTATGAATATATATTTATGTTAATTGGATTATTACTTTTGTTCACTCAAGTTATTCACTTTTATTTTTAATCAAATCAAGAATTTAAAAATGTGATAAATATAATTTTAAAGAGGTATTACCTCTTTGAAATGATATTAAATACCTCTTTGAAATTAAATTTGCATATGTAAATTATATTTTGAGAGAGTAGTTTAGGTCGGCTTGACCTATAATTTGATGCTCACATATTAAATACTTATTTTTTAGGATCTAATGGTGAGGATGAATTTGACTACCAATCAAGCTAGTCAATATTCAACCAACCTTTTTAATTCTATTTATGATTTTTAAATCTTTTTTTTAAATGCAAGAAAAATATTATAAATGTATGGTTGCTTTAAAATTAATATGTCGAAGACACTCCTTCCTTCTCTCTCTTTTTTTTTTTTTTTTAAAAAAACCGAAAAAGAAAATTGACCATTTTAGTGTATAAAATTTCACATTTCTTCATTTTAGTTCTAAACTTTAAACCCCATTTTAGTTGTTCAAACTGTGTGAAAATACTTTAAAACAGTCGTTATAGTTTTTTTTTTCAACACTTATAGACGTCATTGTAAAAAAATGAGTTTGGCTTAAAAAAATGGTGTTATTCTTCCTTCTTTGAAACATTTTTTAAACGCACATGCTTGTTGGTTACCAGTAAATTACAATCTAGTAAAACTTTCATTTTAAGGGTGTTTTTTTTACGTAATTAATAAATTATTACAAATTCTTTTTAATCATTCATAATAATCACTCATTTCTAATCACTTAAAATAATTATTCTTTTTTTTTTTAAACCGGAAAATCGGAAACCACATCCAAACGAGCTACTAGTAAAACTTAAAATTTATTTACTCAAAACAATTTCGTGTTTATAATCATTCAAAACAATCATCCTATAATTCCCCATTCAAATACCTAAAGATTTTAATTTGTTGACAATAGTAAATTTTATATATTTTAATTATACATACAAATTATAAATTATTTAACAAAATTATCAAATTGATGACTATCAATTTAACCTGATTTATTCTTTTTTTTTCGCTATACTGAAATATTTTATAAAAATTTGACAATTTTTTTATATATACTTAATGCTACGGATGAAAAATTTCTAAAAAATTTATAACCGCAGAATTTACAAGAAGATTAACCATCAAACAAAAAGGATTTAAAACAAAAATAAATCAAAGATTTTTTTTTACAAATAAGTCAAATTGAAAAACTATTTATAATACTACAAAAAAAAAAAGCAATTATAGATGTAGGTATTAATTTTTTTAGTACAGTTACAAGTATTAATAATTATATAATATTTTAATATATAATACTATATTAATATACGCATTATATTGTACTAAAAAAGATGACATTAATAATATTTAATATTATATTAATAATACAAAAAAATTTCCTAAAAAAAATTGTATTAATAATCAAATAGTTTTTTTTTTAGTATATATTGTGGGAATGAGGACAAATACCGATTGCTCAAATCTGTGTACTCTGATTTACAATCAAACAATAAAATCGTCACATACTCGCTCAATAAATAGTATTGGATAATGGGTATTTATACCCTATTTTTTTTACTTTAGCAAATATTTTTTAATTTAGATTTATAATTATATGATCAGAATAAGTTATCTATCACAGTTTCCCTAAAATTAATCGACAAATATATCTCTATAATAAAAAACATTGTATGTAACACACAATTTGTGATATCTGGTAACCAGGATGAATGGGTGATATCCAGAGTTTTCAAGAAAACCACCTCCGGCAATGGCGCCGCCACGCACGGCGGCGCAATGAAGAAGACTCTCCCAAATCCCGAACCCACTTCCCCTAATTCCTCCGCTTCTCTCCCCACTCTCCTCGACTCCTCTCCCTACCCCTCCGCCGCCTTCGCCGCCGCCGACGATCCAAGCCTCCACGAGCTGCACGTGTCCTGTTTCTCCACCAGCAACCTCAACTGCTTCGCCGGCGGCCGCGGCGGCGCGGCAGATCTCTCCGCCGCGTCGGCCTTCCCGAACCTCCAGGAGAATCTGCAGGCGCCGTTCTTCTCCCCCATGGCTCCGCATCTTCTAGCCGCGGCCGGCGATTTTTGCGGAGGTGCTCCGGCGCTGGAGGATTCGAGGCCTGTCGGATCCGGCGATGTGGGTGGTTATATGTGGACCTTCTGA

mRNA sequence

ATGGACGGCAGTGGAAGAGGCGGCGGCAGTCACCGAAGCTCGAACGGGTACCTACCGCCGGGGTTTCGGTTCCATCCAACCGACGAAGAGCTGATCGCTCACTACCTTTTGAAGAAAGTACTTGACTCCCATTTCTCCTCGCCCGCCATTGCCCATGTCGACCTTAACAAGTCCGAGCCTTGGGACCTCCCTGAGAAAGCAGCAATGGGAGAGAAAGAGTGGTATTTCTTCAGCCTACGAGACCGGAAATACCCGACCGGGCTGAGAACGAACCGGGCGACGGAAGCCGGGTACTGGAAAGCGACCGGAAAAGACCGTGAAATAAGCAGCTCGAAAACCAATCTTCTGGTCGGAATGAAAAAAACCCTGGTTTTTTACAAAGGCAGAGCTCCCAAAGGCCAAAAAACCAACTGGGTCATGCATGAATTTCGGCTCGCCGGAAAATTCGCTTACCATTTTCTCTCGACCGCTTCTTCCAAGGATGAATGGGTGATATCCAGAGTTTTCAAGAAAACCACCTCCGGCAATGGCGCCGCCACGCACGGCGGCGCAATGAAGAAGACTCTCCCAAATCCCGAACCCACTTCCCCTAATTCCTCCGCTTCTCTCCCCACTCTCCTCGACTCCTCTCCCTACCCCTCCGCCGCCTTCGCCGCCGCCGACGATCCAAGCCTCCACGAGCTGCACGTGTCCTGTTTCTCCACCAGCAACCTCAACTGCTTCGCCGGCGGCCGCGGCGGCGCGGCAGATCTCTCCGCCGCGTCGGCCTTCCCGAACCTCCAGGAGAATCTGCAGGCGCCGTTCTTCTCCCCCATGGCTCCGCATCTTCTAGCCGCGGCCGGCGATTTTTGCGGAGGTGCTCCGGCGCTGGAGGATTCGAGGCCTGTCGGATCCGGCGATGTGGGTGGTTATATGTGGACCTTCTGA

Coding sequence (CDS)

ATGGACGGCAGTGGAAGAGGCGGCGGCAGTCACCGAAGCTCGAACGGGTACCTACCGCCGGGGTTTCGGTTCCATCCAACCGACGAAGAGCTGATCGCTCACTACCTTTTGAAGAAAGTACTTGACTCCCATTTCTCCTCGCCCGCCATTGCCCATGTCGACCTTAACAAGTCCGAGCCTTGGGACCTCCCTGAGAAAGCAGCAATGGGAGAGAAAGAGTGGTATTTCTTCAGCCTACGAGACCGGAAATACCCGACCGGGCTGAGAACGAACCGGGCGACGGAAGCCGGGTACTGGAAAGCGACCGGAAAAGACCGTGAAATAAGCAGCTCGAAAACCAATCTTCTGGTCGGAATGAAAAAAACCCTGGTTTTTTACAAAGGCAGAGCTCCCAAAGGCCAAAAAACCAACTGGGTCATGCATGAATTTCGGCTCGCCGGAAAATTCGCTTACCATTTTCTCTCGACCGCTTCTTCCAAGGATGAATGGGTGATATCCAGAGTTTTCAAGAAAACCACCTCCGGCAATGGCGCCGCCACGCACGGCGGCGCAATGAAGAAGACTCTCCCAAATCCCGAACCCACTTCCCCTAATTCCTCCGCTTCTCTCCCCACTCTCCTCGACTCCTCTCCCTACCCCTCCGCCGCCTTCGCCGCCGCCGACGATCCAAGCCTCCACGAGCTGCACGTGTCCTGTTTCTCCACCAGCAACCTCAACTGCTTCGCCGGCGGCCGCGGCGGCGCGGCAGATCTCTCCGCCGCGTCGGCCTTCCCGAACCTCCAGGAGAATCTGCAGGCGCCGTTCTTCTCCCCCATGGCTCCGCATCTTCTAGCCGCGGCCGGCGATTTTTGCGGAGGTGCTCCGGCGCTGGAGGATTCGAGGCCTGTCGGATCCGGCGATGTGGGTGGTTATATGTGGACCTTCTGA

Protein sequence

MDGSGRGGGSHRSSNGYLPPGFRFHPTDEELIAHYLLKKVLDSHFSSPAIAHVDLNKSEPWDLPEKAAMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREISSSKTNLLVGMKKTLVFYKGRAPKGQKTNWVMHEFRLAGKFAYHFLSTASSKDEWVISRVFKKTTSGNGAATHGGAMKKTLPNPEPTSPNSSASLPTLLDSSPYPSAAFAAADDPSLHELHVSCFSTSNLNCFAGGRGGAADLSAASAFPNLQENLQAPFFSPMAPHLLAAAGDFCGGAPALEDSRPVGSGDVGGYMWTF

Homology

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BLAST of Sed0027535 vs. NCBI nr
Match: XP_023543274.1 (protein CUP-SHAPED COTYLEDON 2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 448.4 bits (1152), Expect = 5.1e-122
Identity = 243/326 (74.54%), Postives = 261/326 (80.06%), Query Frame = 0


Query: 8   GGSHRSS-NGYLPPGFRFHPTDEELIAHYLLKKVLDSHFSSPAIAHVDLNKSEPWDLPEK 67
           G  HRSS NGYL PGFRFHPTDEELIAHYLLKKVLDSHFSSPAIA+VDLNKSEPWDLPEK
Sbjct: 3   GSVHRSSNNGYLAPGFRFHPTDEELIAHYLLKKVLDSHFSSPAIAYVDLNKSEPWDLPEK 62

Query: 68  AAMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREISSSKTNLLVGMKKTLVFY 127
           A MGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREI+SSKTN +VGMKKTLVFY
Sbjct: 63  AVMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREITSSKTNSVVGMKKTLVFY 122

Query: 128 KGRAPKGQKTNWVMHEFRLAGKFAYHFLSTASSKDEWVISRVFKKTTSGNGAATHGGAMK 187
            GRAPKGQKT+WVMHEFRLAGKFAYHFLS ASSKDEWVISRVFKKT+    AA HGG MK
Sbjct: 123 TGRAPKGQKTHWVMHEFRLAGKFAYHFLSAASSKDEWVISRVFKKTS----AAMHGGVMK 182

Query: 188 KTLPNPEPTSPNSSASLPTLLDSSPYPSAAF--------------AAADDPSLHELHVSC 247
           KT  +PEPTSP SS SLP LLDSSPY SAA               ++ DD   HELHV+C
Sbjct: 183 KTRRDPEPTSP-SSVSLPPLLDSSPYLSAAADTSISTSAFANREGSSLDDQREHELHVTC 242

Query: 248 FSTSNLNCFAGG--RGGAADLSAASAFPNL---QENLQAPFFSPMAP---HLLAAAGDF- 307
           FST+NL+  A     GG  +LS  SAFPNL   QENLQAPFFSP++P   HLL+ A D  
Sbjct: 243 FSTNNLSYPAASFPAGGGPNLS-VSAFPNLRSIQENLQAPFFSPVSPPLVHLLSGAADVD 302

Query: 308 -CGGAPALEDSRPVGSGDVGGYMWTF 309
            CGGAP+ EDSR +GS D+G YMWTF
Sbjct: 303 GCGGAPSPEDSRTIGSADLGAYMWTF 322

[Close]

BLAST of Sed0027535 vs. NCBI nr
Match: KAG7031044.1 (Protein CUP-SHAPED COTYLEDON 2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 444.9 bits (1143), Expect = 5.7e-121
Identity = 243/326 (74.54%), Postives = 261/326 (80.06%), Query Frame = 0


Query: 8   GGSHRSSN-GYLPPGFRFHPTDEELIAHYLLKKVLDSHFSSPAIAHVDLNKSEPWDLPEK 67
           G  HRSSN GYL PGFRFHPTDEELIAHYLLKKVLDSHFSSPAI +VDLNKSEPWDLPEK
Sbjct: 3   GSVHRSSNKGYLAPGFRFHPTDEELIAHYLLKKVLDSHFSSPAIGYVDLNKSEPWDLPEK 62

Query: 68  AAMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREISSSKTNLLVGMKKTLVFY 127
           A MGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREI+SSKTN +VGMKKTLVFY
Sbjct: 63  AVMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREITSSKTNSVVGMKKTLVFY 122

Query: 128 KGRAPKGQKTNWVMHEFRLAGKFAYHFLSTASSKDEWVISRVFKKTTSGNGAATHGGAMK 187
            GRAPKGQKT+WVMHEFRLAGKFAYHFLS ASSKDEWVISRVFKKT+    AA HGG MK
Sbjct: 123 TGRAPKGQKTHWVMHEFRLAGKFAYHFLSAASSKDEWVISRVFKKTS----AAMHGGVMK 182

Query: 188 KTLPNPEPTSPNSSASLPTLLDSSPY---------PSAAFAAADDPSL-----HELHVSC 247
           KT  +PEPTSP SS SLP LLDSSPY          ++AFA  D  SL     HELHV+C
Sbjct: 183 KTRRDPEPTSP-SSVSLPPLLDSSPYLYAAADTSISTSAFANRDGSSLDDQREHELHVTC 242

Query: 248 FSTSNLNCFAGG--RGGAADLSAASAFPNL---QENLQAPFFSPMAP---HLLAAAGDF- 307
           FST+NL+  A     GG  +LS  SAFPNL   QENLQAPFFSP++P   HLL+ A D  
Sbjct: 243 FSTNNLSYPAASFPAGGGHNLS-VSAFPNLRSIQENLQAPFFSPVSPPLVHLLSGAADVD 302

Query: 308 -CGGAPALEDSRPVGSGDVGGYMWTF 309
            CGGAP+ EDSR +GS D+G YMWTF
Sbjct: 303 GCGGAPSPEDSRTMGSADLGAYMWTF 322

[Close]

BLAST of Sed0027535 vs. NCBI nr
Match: XP_022942010.1 (protein CUP-SHAPED COTYLEDON 2-like [Cucurbita moschata])

HSP 1 Score: 444.5 bits (1142), Expect = 7.4e-121
Identity = 243/323 (75.23%), Postives = 260/323 (80.50%), Query Frame = 0


Query: 11  HRSS-NGYLPPGFRFHPTDEELIAHYLLKKVLDSHFSSPAIAHVDLNKSEPWDLPEKAAM 70
           HRSS NGYL PGFRFHPTDEELIAHYLLKKVLDSHFSSPAIA+VDLNKSEPWDLPEKA M
Sbjct: 6   HRSSNNGYLAPGFRFHPTDEELIAHYLLKKVLDSHFSSPAIAYVDLNKSEPWDLPEKAVM 65

Query: 71  GEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREISSSKTNLLVGMKKTLVFYKGR 130
           GEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREI+SSKTN +VGMKKTLVFY GR
Sbjct: 66  GEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREITSSKTNSVVGMKKTLVFYTGR 125

Query: 131 APKGQKTNWVMHEFRLAGKFAYHFLSTASSKDEWVISRVFKKTTSGNGAATHGGAMKKTL 190
           APKGQKT+WVMHEF LAGKFAYHFLS ASSKDEWVISRVFKKT+    AA HGG MKKT 
Sbjct: 126 APKGQKTHWVMHEFHLAGKFAYHFLSAASSKDEWVISRVFKKTS----AAMHGGVMKKTR 185

Query: 191 PNPEPTSPNSSASLPTLLDSSPYPSA---------AFAAADDPSL-----HELHVSCFST 250
            +PEPTSP SS SLP LLDSSPY SA         AFA  D  SL     H+LHV+CFST
Sbjct: 186 GDPEPTSP-SSVSLPPLLDSSPYLSAAADTSISTSAFANRDGSSLDDQREHQLHVTCFST 245

Query: 251 SNLNCFAGG--RGGAADLSAASAFPNL---QENLQAPFFSPMAP---HLLAAAGDF--CG 309
           +NL+  A     GG  +LS  SAFPNL   QENLQAPFFSP++P   HLL+ A D   CG
Sbjct: 246 NNLSYPAASFPAGGGHNLS-VSAFPNLRSIQENLQAPFFSPVSPPLVHLLSGAADVDGCG 305

[Close]

BLAST of Sed0027535 vs. NCBI nr
Match: XP_008456019.1 (PREDICTED: protein CUP-SHAPED COTYLEDON 2-like [Cucumis melo])

HSP 1 Score: 443.7 bits (1140), Expect = 1.3e-120
Identity = 238/320 (74.38%), Postives = 254/320 (79.38%), Query Frame = 0


Query: 7   GGGSHRSSNGYLPPGFRFHPTDEELIAHYLLKKVLDSHFSSPAIAHVDLNKSEPWDLPEK 66
           GGG  RSS+GYLPPGFRFHPTDEELI HYLLKKVL+SHFSSPAIAHVDLNKSEPWDLPEK
Sbjct: 4   GGGRQRSSDGYLPPGFRFHPTDEELIGHYLLKKVLNSHFSSPAIAHVDLNKSEPWDLPEK 63

Query: 67  AAMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREISSSKTNLLVGMKKTLVFY 126
           A MGEKEWYFFS+RDRKYPTGLRTNRATEAGYWKATGKDREI SSKTN L+GMKKTLVFY
Sbjct: 64  ALMGEKEWYFFSVRDRKYPTGLRTNRATEAGYWKATGKDREIMSSKTNSLIGMKKTLVFY 123

Query: 127 KGRAPKGQKTNWVMHEFRLAGKFAYHFLSTASSKDEWVISRVFKKTTSGNGAATHGGAMK 186
           +GRAPKGQK+NWVMHEFRLAGKF+YHFLS A+SKDEWVISRVFKKT SGNGAA HGGAMK
Sbjct: 124 RGRAPKGQKSNWVMHEFRLAGKFSYHFLSAATSKDEWVISRVFKKTGSGNGAAMHGGAMK 183

Query: 187 KTL-PNPEPTSPNSSASLPTLLDSSPY---------PSAAFAAADDPSLHELHVSCFSTS 246
           KT  PNPEP+SP SS SLP LLDSSPY          SAA+A  DD   HELHV+CFST+
Sbjct: 184 KTARPNPEPSSP-SSVSLPPLLDSSPYTSAAADATVSSAAYADGDDTREHELHVTCFSTN 243

Query: 247 NLNCFAGGRGGAADLSAASAFPNLQENLQAPF-FSPMAP---HLLAAAG--DFCGGAPAL 306
           NLN            S+ASAFP+ QENLQAPF  SP+ P   HL+A A   D CGG P  
Sbjct: 244 NLNY----------CSSASAFPSFQENLQAPFLISPVGPSLVHLVAGAANLDGCGGGPT- 303

Query: 307 EDSRPVGSGDV--GGYMWTF 309
               P GS DV   GYMW F
Sbjct: 304 ----PEGSADVNASGYMWRF 307

[Close]

BLAST of Sed0027535 vs. NCBI nr
Match: XP_011651296.1 (protein CUP-SHAPED COTYLEDON 2 [Cucumis sativus] >KGN57633.1 hypothetical protein Csa_011391 [Cucumis sativus])

HSP 1 Score: 439.5 bits (1129), Expect = 2.4e-119
Identity = 233/321 (72.59%), Postives = 249/321 (77.57%), Query Frame = 0


Query: 7   GGGSHRSSNGYLPPGFRFHPTDEELIAHYLLKKVLDSHFSSPAIAHVDLNKSEPWDLPEK 66
           GGG  RSS+GYLPPGFRFHPTDEELI HYLLKKVL+SHFSSPAIAHVDLNKSEPWDLPEK
Sbjct: 3   GGGGQRSSDGYLPPGFRFHPTDEELIGHYLLKKVLNSHFSSPAIAHVDLNKSEPWDLPEK 62

Query: 67  AAMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREISSSKTNLLVGMKKTLVFY 126
           A MGEKEWYFFS+RDRKYPTGLRTNRATEAGYWKATGKDREI SSKTN L+GMKKTLVFY
Sbjct: 63  ALMGEKEWYFFSVRDRKYPTGLRTNRATEAGYWKATGKDREIMSSKTNSLIGMKKTLVFY 122

Query: 127 KGRAPKGQKTNWVMHEFRLAGKFAYHFLSTASSKDEWVISRVFKKTTSGNGAATHGGAMK 186
           +GRAPKGQK+NWVMHEFRLAGKF+YHFLS A+SKDEWVISRVFKKT SGNGA  HGGAMK
Sbjct: 123 RGRAPKGQKSNWVMHEFRLAGKFSYHFLSAATSKDEWVISRVFKKTGSGNGATMHGGAMK 182

Query: 187 KTLPNPEPTSPNSSASLPTLLDSSPYPSAAFAA-----------ADDPSLHELHVSCFST 246
           KT PNPEP+SP SS SLP LLDSSPYPSAA AA            DD   HELHV+CFST
Sbjct: 183 KTCPNPEPSSP-SSVSLPPLLDSSPYPSAAVAADATVSSAAYADGDDTREHELHVTCFST 242

Query: 247 SNLNCFAGGRGGAADLSAASAFPNLQENLQAPF-FSPMAPHLLAAAG-----DFCGGAPA 306
           +NLN             +ASAFP+ QENLQAPF  SP+ P L+   G     D  GG P 
Sbjct: 243 NNLN-----------YCSASAFPSFQENLQAPFLISPVGPSLVHLVGEAANLDGYGGGPT 302

Query: 307 LEDSRPVGSGDV--GGYMWTF 309
                P GS DV    Y+W F
Sbjct: 303 -----PEGSADVNASAYVWRF 306

[Close]

BLAST of Sed0027535 vs. ExPASy Swiss-Prot
Match: O04017 (Protein CUP-SHAPED COTYLEDON 2 OS=Arabidopsis thaliana OX=3702 GN=NAC098 PE=1 SV=1)

HSP 1 Score: 292.7 bits (748), Expect = 4.7e-78
Identity = 163/258 (63.18%), Postives = 180/258 (69.77%), Query Frame = 0


Query: 11  HRSSNGYLPPGFRFHPTDEELIAHYLLKKVLDSHFSSPAIAHVDLNKSEPWDLPEKAAMG 70
           H   + YLPPGFRFHPTDEELI HYLL+KVLD  FSS AIA VDLNK EPW LP +A MG
Sbjct: 10  HGGDSQYLPPGFRFHPTDEELITHYLLRKVLDGCFSSRAIAEVDLNKCEPWQLPGRAKMG 69

Query: 71  EKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREISSSKTNLLVGMKKTLVFYKGRA 130
           EKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREI SSKT  LVGMKKTLVFYKGRA
Sbjct: 70  EKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIFSSKTCALVGMKKTLVFYKGRA 129

Query: 131 PKGQKTNWVMHEFRLAGKFAYHFLSTASSKDEWVISRVFKKTT-SGNGAATHGG------ 190
           PKG+K+NWVMHE+RL GKF+YHF+S  SSKDEWVISRVF+KTT +  GA + GG      
Sbjct: 130 PKGEKSNWVMHEYRLEGKFSYHFIS-RSSKDEWVISRVFQKTTLASTGAVSEGGGGGGAT 189

Query: 191 ---------AMKKTLPN-------PEPTSPNSSASLPTLLD----------SSPYPSAAF 236
                    + K  +P+        +P+SP SS SLP LLD          S  Y S + 
Sbjct: 190 VSVSSGTGPSKKTKVPSTISRNYQEQPSSP-SSVSLPPLLDPTTTLGYTDSSCSYDSRST 249

[Close]

BLAST of Sed0027535 vs. ExPASy Swiss-Prot
Match: Q9FRV4 (Protein CUP-SHAPED COTYLEDON 1 OS=Arabidopsis thaliana OX=3702 GN=NAC054 PE=1 SV=1)

HSP 1 Score: 265.4 bits (677), Expect = 8.1e-70
Identity = 123/155 (79.35%), Postives = 141/155 (90.97%), Query Frame = 0


Query: 18  LPPGFRFHPTDEELIAHYLLKKVLDSHFSSPAIAHVDLNKSEPWDLPEKAAMGEKEWYFF 77
           +PPGFRFHPTDEELI +YLLKKVLDS+FS  AI+ VDLNKSEPW+LPEKA MGEKEWYFF
Sbjct: 20  MPPGFRFHPTDEELITYYLLKKVLDSNFSCAAISQVDLNKSEPWELPEKAKMGEKEWYFF 79

Query: 78  SLRDRKYPTGLRTNRATEAGYWKATGKDREISSSKTNLLVGMKKTLVFYKGRAPKGQKTN 137
           +LRDRKYPTGLRTNRATEAGYWKATGKDREI SSKT  L+GMKKTLVFYKGRAPKG+K+ 
Sbjct: 80  TLRDRKYPTGLRTNRATEAGYWKATGKDREIKSSKTKSLLGMKKTLVFYKGRAPKGEKSC 139

Query: 138 WVMHEFRLAGKFAYHFLSTASSKDEWVISRVFKKT 173
           WVMHE+RL GKF+YH++S +S+KDEWV+ +V  K+
Sbjct: 140 WVMHEYRLDGKFSYHYIS-SSAKDEWVLCKVCLKS 173

[Close]

BLAST of Sed0027535 vs. ExPASy Swiss-Prot
Match: Q9FLJ2 (NAC domain-containing protein 100 OS=Arabidopsis thaliana OX=3702 GN=NAC100 PE=2 SV=1)

HSP 1 Score: 256.5 bits (654), Expect = 3.8e-67
Identity = 141/232 (60.78%), Postives = 161/232 (69.40%), Query Frame = 0


Query: 18  LPPGFRFHPTDEELIAHYLLKKVLDSHFSSPAIAHVDLNKSEPWDLPEKAAMGEKEWYFF 77
           LPPGFRFHPTDEELI HYL KKVLD+ FS+ AI  VDLNKSEPW+LP  A MGEKEWYFF
Sbjct: 16  LPPGFRFHPTDEELITHYLHKKVLDTSFSAKAIGEVDLNKSEPWELPWMAKMGEKEWYFF 75

Query: 78  SLRDRKYPTGLRTNRATEAGYWKATGKDREISSSKTNLLVGMKKTLVFYKGRAPKGQKTN 137
            +RDRKYPTGLRTNRATEAGYWKATGKD+EI   K+  LVGMKKTLVFY+GRAPKGQKTN
Sbjct: 76  CVRDRKYPTGLRTNRATEAGYWKATGKDKEIYRGKS--LVGMKKTLVFYRGRAPKGQKTN 135

Query: 138 WVMHEFRLAGKFAYHFLSTASSKDEWVISRVFKKTTSGNGAATHGGAMKKTLPNPEPTSP 197
           WVMHE+RL GKF+ H L   ++K+EWVI RVF+K+  G            +L     T  
Sbjct: 136 WVMHEYRLEGKFSAHNL-PKTAKNEWVICRVFQKSAGGKKIPISSLIRIGSL----GTDF 195

Query: 198 NSSASLPTLLDSSPYPSAAFAAADDPSLHELHVSCFST-------SNLNCFA 243
           N S  LP+L DSSPY        D      ++V CFS        + LNCF+
Sbjct: 196 NPSL-LPSLTDSSPY-------NDKTKTEPVYVPCFSNQTDQNQGTTLNCFS 232

[Close]

BLAST of Sed0027535 vs. ExPASy Swiss-Prot
Match: Q9FLR3 (NAC domain-containing protein 79 OS=Arabidopsis thaliana OX=3702 GN=NAC079 PE=2 SV=1)

HSP 1 Score: 252.7 bits (644), Expect = 5.4e-66
Identity = 139/234 (59.40%), Postives = 160/234 (68.38%), Query Frame = 0


Query: 18  LPPGFRFHPTDEELIAHYLLKKVLDSHFSSPAIAHVDLNKSEPWDLPEKAAMGEKEWYFF 77
           LPPGFRFHPTDEELI HYL KKVLD  FS+ AI  VDLNK+EPW+LP KA +GEKEWYFF
Sbjct: 17  LPPGFRFHPTDEELITHYLHKKVLDLGFSAKAIGEVDLNKAEPWELPYKAKIGEKEWYFF 76

Query: 78  SLRDRKYPTGLRTNRATEAGYWKATGKDREISSSKTNLLVGMKKTLVFYKGRAPKGQKTN 137
            +RDRKYPTGLRTNRAT+AGYWKATGKD+EI   K+  LVGMKKTLVFY+GRAPKGQKTN
Sbjct: 77  CVRDRKYPTGLRTNRATQAGYWKATGKDKEIFRGKS--LVGMKKTLVFYRGRAPKGQKTN 136

Query: 138 WVMHEFRLAGKFAYHFLSTASSKDEWVISRVFKKTTSGNGAATHGGAMKKTLPNP---EP 197
           WVMHE+RL GK + H L   ++K+EWVI RVF KT  G           K +P       
Sbjct: 137 WVMHEYRLDGKLSAHNL-PKTAKNEWVICRVFHKTAGG-----------KKIPISTLIRI 196

Query: 198 TSPNSSASLPTLLDSSPYPSAAFAAADDPSLHELHVSCFST------SNLNCFA 243
            S  + +SLP L DSSPY        D      ++V CFS       + LNCF+
Sbjct: 197 GSYGTGSSLPPLTDSSPY-------NDKTKTEPVYVPCFSNQAETRGTILNCFS 229

[Close]

BLAST of Sed0027535 vs. ExPASy Swiss-Prot
Match: Q9LJW3 (NAC domain-containing protein 59 OS=Arabidopsis thaliana OX=3702 GN=NAC59 PE=1 SV=1)

HSP 1 Score: 243.8 bits (621), Expect = 2.5e-63
Identity = 128/195 (65.64%), Postives = 142/195 (72.82%), Query Frame = 0


Query: 18  LPPGFRFHPTDEELIAHYLLKKVLDSHFSSPAIAHVDLNKSEPWDLPEKAAMGEKEWYFF 77
           LPPGFRFHPTDEELI HYL  KV++S FS+ AI  VDLNK EPWDLP KA +GEKEWYFF
Sbjct: 24  LPPGFRFHPTDEELITHYLRPKVVNSFFSAIAIGEVDLNKVEPWDLPWKAKLGEKEWYFF 83

Query: 78  SLRDRKYPTGLRTNRATEAGYWKATGKDREISSSKTNLLVGMKKTLVFYKGRAPKGQKTN 137
            +RDRKYPTGLRTNRAT+AGYWKATGKD+EI   K+  LVGMKKTLVFYKGRAPKG KTN
Sbjct: 84  CVRDRKYPTGLRTNRATKAGYWKATGKDKEIFKGKS--LVGMKKTLVFYKGRAPKGVKTN 143

Query: 138 WVMHEFRLAGKFAYHFLSTASSKDEWVISRVFKKTTSGNGAATHGGAMKKTLPNPEPTSP 197
           WVMHE+RL GKFA   LS  ++K+E VISRVF   T G                   T  
Sbjct: 144 WVMHEYRLEGKFAIDNLS-KTAKNECVISRVFHTRTDG-------------------TKE 196

Query: 198 NSSASLPTLLDSSPY 213
           + S  LP L+DSSPY
Sbjct: 204 HMSVGLPPLMDSSPY 196

[Close]

BLAST of Sed0027535 vs. ExPASy TrEMBL
Match: A0A6J1FVE0 (protein CUP-SHAPED COTYLEDON 2-like OS=Cucurbita moschata OX=3662 GN=LOC111447202 PE=4 SV=1)

HSP 1 Score: 444.5 bits (1142), Expect = 3.6e-121
Identity = 243/323 (75.23%), Postives = 260/323 (80.50%), Query Frame = 0


Query: 11  HRSS-NGYLPPGFRFHPTDEELIAHYLLKKVLDSHFSSPAIAHVDLNKSEPWDLPEKAAM 70
           HRSS NGYL PGFRFHPTDEELIAHYLLKKVLDSHFSSPAIA+VDLNKSEPWDLPEKA M
Sbjct: 6   HRSSNNGYLAPGFRFHPTDEELIAHYLLKKVLDSHFSSPAIAYVDLNKSEPWDLPEKAVM 65

Query: 71  GEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREISSSKTNLLVGMKKTLVFYKGR 130
           GEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREI+SSKTN +VGMKKTLVFY GR
Sbjct: 66  GEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREITSSKTNSVVGMKKTLVFYTGR 125

Query: 131 APKGQKTNWVMHEFRLAGKFAYHFLSTASSKDEWVISRVFKKTTSGNGAATHGGAMKKTL 190
           APKGQKT+WVMHEF LAGKFAYHFLS ASSKDEWVISRVFKKT+    AA HGG MKKT 
Sbjct: 126 APKGQKTHWVMHEFHLAGKFAYHFLSAASSKDEWVISRVFKKTS----AAMHGGVMKKTR 185

Query: 191 PNPEPTSPNSSASLPTLLDSSPYPSA---------AFAAADDPSL-----HELHVSCFST 250
            +PEPTSP SS SLP LLDSSPY SA         AFA  D  SL     H+LHV+CFST
Sbjct: 186 GDPEPTSP-SSVSLPPLLDSSPYLSAAADTSISTSAFANRDGSSLDDQREHQLHVTCFST 245

Query: 251 SNLNCFAGG--RGGAADLSAASAFPNL---QENLQAPFFSPMAP---HLLAAAGDF--CG 309
           +NL+  A     GG  +LS  SAFPNL   QENLQAPFFSP++P   HLL+ A D   CG
Sbjct: 246 NNLSYPAASFPAGGGHNLS-VSAFPNLRSIQENLQAPFFSPVSPPLVHLLSGAADVDGCG 305

[Close]

BLAST of Sed0027535 vs. ExPASy TrEMBL
Match: A0A1S3C1U0 (protein CUP-SHAPED COTYLEDON 2-like OS=Cucumis melo OX=3656 GN=LOC103496071 PE=4 SV=1)

HSP 1 Score: 443.7 bits (1140), Expect = 6.1e-121
Identity = 238/320 (74.38%), Postives = 254/320 (79.38%), Query Frame = 0


Query: 7   GGGSHRSSNGYLPPGFRFHPTDEELIAHYLLKKVLDSHFSSPAIAHVDLNKSEPWDLPEK 66
           GGG  RSS+GYLPPGFRFHPTDEELI HYLLKKVL+SHFSSPAIAHVDLNKSEPWDLPEK
Sbjct: 4   GGGRQRSSDGYLPPGFRFHPTDEELIGHYLLKKVLNSHFSSPAIAHVDLNKSEPWDLPEK 63

Query: 67  AAMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREISSSKTNLLVGMKKTLVFY 126
           A MGEKEWYFFS+RDRKYPTGLRTNRATEAGYWKATGKDREI SSKTN L+GMKKTLVFY
Sbjct: 64  ALMGEKEWYFFSVRDRKYPTGLRTNRATEAGYWKATGKDREIMSSKTNSLIGMKKTLVFY 123

Query: 127 KGRAPKGQKTNWVMHEFRLAGKFAYHFLSTASSKDEWVISRVFKKTTSGNGAATHGGAMK 186
           +GRAPKGQK+NWVMHEFRLAGKF+YHFLS A+SKDEWVISRVFKKT SGNGAA HGGAMK
Sbjct: 124 RGRAPKGQKSNWVMHEFRLAGKFSYHFLSAATSKDEWVISRVFKKTGSGNGAAMHGGAMK 183

Query: 187 KTL-PNPEPTSPNSSASLPTLLDSSPY---------PSAAFAAADDPSLHELHVSCFSTS 246
           KT  PNPEP+SP SS SLP LLDSSPY          SAA+A  DD   HELHV+CFST+
Sbjct: 184 KTARPNPEPSSP-SSVSLPPLLDSSPYTSAAADATVSSAAYADGDDTREHELHVTCFSTN 243

Query: 247 NLNCFAGGRGGAADLSAASAFPNLQENLQAPF-FSPMAP---HLLAAAG--DFCGGAPAL 306
           NLN            S+ASAFP+ QENLQAPF  SP+ P   HL+A A   D CGG P  
Sbjct: 244 NLNY----------CSSASAFPSFQENLQAPFLISPVGPSLVHLVAGAANLDGCGGGPT- 303

Query: 307 EDSRPVGSGDV--GGYMWTF 309
               P GS DV   GYMW F
Sbjct: 304 ----PEGSADVNASGYMWRF 307

[Close]

BLAST of Sed0027535 vs. ExPASy TrEMBL
Match: A0A0A0L787 (NAC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G234520 PE=4 SV=1)

HSP 1 Score: 439.5 bits (1129), Expect = 1.2e-119
Identity = 233/321 (72.59%), Postives = 249/321 (77.57%), Query Frame = 0


Query: 7   GGGSHRSSNGYLPPGFRFHPTDEELIAHYLLKKVLDSHFSSPAIAHVDLNKSEPWDLPEK 66
           GGG  RSS+GYLPPGFRFHPTDEELI HYLLKKVL+SHFSSPAIAHVDLNKSEPWDLPEK
Sbjct: 3   GGGGQRSSDGYLPPGFRFHPTDEELIGHYLLKKVLNSHFSSPAIAHVDLNKSEPWDLPEK 62

Query: 67  AAMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREISSSKTNLLVGMKKTLVFY 126
           A MGEKEWYFFS+RDRKYPTGLRTNRATEAGYWKATGKDREI SSKTN L+GMKKTLVFY
Sbjct: 63  ALMGEKEWYFFSVRDRKYPTGLRTNRATEAGYWKATGKDREIMSSKTNSLIGMKKTLVFY 122

Query: 127 KGRAPKGQKTNWVMHEFRLAGKFAYHFLSTASSKDEWVISRVFKKTTSGNGAATHGGAMK 186
           +GRAPKGQK+NWVMHEFRLAGKF+YHFLS A+SKDEWVISRVFKKT SGNGA  HGGAMK
Sbjct: 123 RGRAPKGQKSNWVMHEFRLAGKFSYHFLSAATSKDEWVISRVFKKTGSGNGATMHGGAMK 182

Query: 187 KTLPNPEPTSPNSSASLPTLLDSSPYPSAAFAA-----------ADDPSLHELHVSCFST 246
           KT PNPEP+SP SS SLP LLDSSPYPSAA AA            DD   HELHV+CFST
Sbjct: 183 KTCPNPEPSSP-SSVSLPPLLDSSPYPSAAVAADATVSSAAYADGDDTREHELHVTCFST 242

Query: 247 SNLNCFAGGRGGAADLSAASAFPNLQENLQAPF-FSPMAPHLLAAAG-----DFCGGAPA 306
           +NLN             +ASAFP+ QENLQAPF  SP+ P L+   G     D  GG P 
Sbjct: 243 NNLN-----------YCSASAFPSFQENLQAPFLISPVGPSLVHLVGEAANLDGYGGGPT 302

Query: 307 LEDSRPVGSGDV--GGYMWTF 309
                P GS DV    Y+W F
Sbjct: 303 -----PEGSADVNASAYVWRF 306

[Close]

BLAST of Sed0027535 vs. ExPASy TrEMBL
Match: A0A6J1E4T0 (protein CUP-SHAPED COTYLEDON 2-like OS=Cucurbita moschata OX=3662 GN=LOC111430609 PE=4 SV=1)

HSP 1 Score: 436.0 bits (1120), Expect = 1.3e-118
Identity = 237/317 (74.76%), Postives = 254/317 (80.13%), Query Frame = 0


Query: 1   MDGSGRGGGSHRSSNGYLPPGFRFHPTDEELIAHYLLKKVLDSHFSSPAIAHVDLNKSEP 60
           MD  G GGG H+SS+G+LPPGFRFHPTDEELIAHYLLKKVLDSHFSSPAIAHVDLNKSEP
Sbjct: 1   MDHGGSGGG-HQSSDGFLPPGFRFHPTDEELIAHYLLKKVLDSHFSSPAIAHVDLNKSEP 60

Query: 61  WDLPEKAAMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREISSSKTNLLVGMK 120
           WDLPEKA MGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREI SSKTN L+GMK
Sbjct: 61  WDLPEKALMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIMSSKTNSLIGMK 120

Query: 121 KTLVFYKGRAPKGQKTNWVMHEFRLAGKFAYHFLSTASSKDEWVISRVFKKTTSGNGAAT 180
           KTLVFY+GRAPKGQKTNWVMHEFRLAGKFAYHFLS  SSKDEWVIS+VFKKT    GAA 
Sbjct: 121 KTLVFYRGRAPKGQKTNWVMHEFRLAGKFAYHFLSADSSKDEWVISKVFKKT----GAAM 180

Query: 181 HGG-AMKKTLPNPEPTSPNSSASLPTLLDSSPYPSAAFAAADDPSLHELHVSCFSTSNLN 240
           HGG + +KT  +PEP+SP S  SLP LLDSS           DPS HELHV+CFST+N+N
Sbjct: 181 HGGSSTRKTRLDPEPSSP-SLVSLPPLLDSSA----------DPSEHELHVTCFSTNNVN 240

Query: 241 CFAGGRGGAADLSAASAFPNL---QENLQAPFFSPMAP---HLLAAAGDF--CGGAPALE 300
             A   GG +DLS  S FPNL   QENLQAPFFSP+ P   HLL  A +   CG  PA E
Sbjct: 241 YPA---GGGSDLS-PSVFPNLLSFQENLQAPFFSPVGPPLVHLLTDAAELVGCGDGPAPE 297

Query: 301 DSRPVGSGDVGGYMWTF 309
           DSR VGS D+  YMWTF
Sbjct: 301 DSRLVGSADMATYMWTF 297

[Close]

BLAST of Sed0027535 vs. ExPASy TrEMBL
Match: A0A6J1JAG2 (protein CUP-SHAPED COTYLEDON 2-like OS=Cucurbita maxima OX=3661 GN=LOC111482723 PE=4 SV=1)

HSP 1 Score: 430.6 bits (1106), Expect = 5.4e-117
Identity = 232/313 (74.12%), Postives = 250/313 (79.87%), Query Frame = 0


Query: 5   GRGGGSHRSSNGYLPPGFRFHPTDEELIAHYLLKKVLDSHFSSPAIAHVDLNKSEPWDLP 64
           G  GG H++S+G+LPPGFRFHPTDEELIAHYLLKKVLDSHFSSPAIAHVDLNKSEPWDLP
Sbjct: 4   GGSGGGHQNSDGFLPPGFRFHPTDEELIAHYLLKKVLDSHFSSPAIAHVDLNKSEPWDLP 63

Query: 65  EKAAMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREISSSKTNLLVGMKKTLV 124
           EKA MGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREI SSKTN L+GMKKTLV
Sbjct: 64  EKALMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIMSSKTNSLIGMKKTLV 123

Query: 125 FYKGRAPKGQKTNWVMHEFRLAGKFAYHFLSTASSKDEWVISRVFKKTTSGNGAATHGG- 184
           FY+GRAPKGQKTNWVMHEFRLAGKFAYHFLS  SSKDEWVIS+VFKKT    GAA HGG 
Sbjct: 124 FYRGRAPKGQKTNWVMHEFRLAGKFAYHFLSADSSKDEWVISKVFKKT----GAAMHGGS 183

Query: 185 AMKKTLPNPEPTSPNSSASLPTLLDSSPYPSAAFAAADDPSLHELHVSCFSTSNLNCFAG 244
           + KK   +PEP+SP SS SLP  LDSS           DPS +ELHV+CFST+N+N  A 
Sbjct: 184 STKKIRLDPEPSSP-SSVSLPPRLDSSA----------DPSENELHVTCFSTNNVNYPA- 243

Query: 245 GRGGAADLSAASAFPNL---QENLQAPFFSPMAP---HLLAAAGDF--CGGAPALEDSRP 304
             GG +DLS  S FPNL   QENLQAPFFSP+ P   HLL  A +   CG  PA EDSR 
Sbjct: 244 --GGGSDLS-PSVFPNLLSFQENLQAPFFSPVGPPLVHLLTDAAELVGCGDGPAPEDSRL 297

Query: 305 VGSGDVGGYMWTF 309
           VGS D+  YMWTF
Sbjct: 304 VGSADMAAYMWTF 297

[Close]

BLAST of Sed0027535 vs. TAIR 10
Match: AT5G53950.1 (NAC (No Apical Meristem) domain transcriptional regulator superfamily protein )

HSP 1 Score: 292.7 bits (748), Expect = 3.4e-79
Identity = 163/258 (63.18%), Postives = 180/258 (69.77%), Query Frame = 0


Query: 11  HRSSNGYLPPGFRFHPTDEELIAHYLLKKVLDSHFSSPAIAHVDLNKSEPWDLPEKAAMG 70
           H   + YLPPGFRFHPTDEELI HYLL+KVLD  FSS AIA VDLNK EPW LP +A MG
Sbjct: 10  HGGDSQYLPPGFRFHPTDEELITHYLLRKVLDGCFSSRAIAEVDLNKCEPWQLPGRAKMG 69

Query: 71  EKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREISSSKTNLLVGMKKTLVFYKGRA 130
           EKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREI SSKT  LVGMKKTLVFYKGRA
Sbjct: 70  EKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIFSSKTCALVGMKKTLVFYKGRA 129

Query: 131 PKGQKTNWVMHEFRLAGKFAYHFLSTASSKDEWVISRVFKKTT-SGNGAATHGG------ 190
           PKG+K+NWVMHE+RL GKF+YHF+S  SSKDEWVISRVF+KTT +  GA + GG      
Sbjct: 130 PKGEKSNWVMHEYRLEGKFSYHFIS-RSSKDEWVISRVFQKTTLASTGAVSEGGGGGGAT 189

Query: 191 ---------AMKKTLPN-------PEPTSPNSSASLPTLLD----------SSPYPSAAF 236
                    + K  +P+        +P+SP SS SLP LLD          S  Y S + 
Sbjct: 190 VSVSSGTGPSKKTKVPSTISRNYQEQPSSP-SSVSLPPLLDPTTTLGYTDSSCSYDSRST 249

[Close]

BLAST of Sed0027535 vs. TAIR 10
Match: AT3G15170.1 (NAC (No Apical Meristem) domain transcriptional regulator superfamily protein )

HSP 1 Score: 265.4 bits (677), Expect = 5.7e-71
Identity = 123/155 (79.35%), Postives = 141/155 (90.97%), Query Frame = 0


Query: 18  LPPGFRFHPTDEELIAHYLLKKVLDSHFSSPAIAHVDLNKSEPWDLPEKAAMGEKEWYFF 77
           +PPGFRFHPTDEELI +YLLKKVLDS+FS  AI+ VDLNKSEPW+LPEKA MGEKEWYFF
Sbjct: 20  MPPGFRFHPTDEELITYYLLKKVLDSNFSCAAISQVDLNKSEPWELPEKAKMGEKEWYFF 79

Query: 78  SLRDRKYPTGLRTNRATEAGYWKATGKDREISSSKTNLLVGMKKTLVFYKGRAPKGQKTN 137
           +LRDRKYPTGLRTNRATEAGYWKATGKDREI SSKT  L+GMKKTLVFYKGRAPKG+K+ 
Sbjct: 80  TLRDRKYPTGLRTNRATEAGYWKATGKDREIKSSKTKSLLGMKKTLVFYKGRAPKGEKSC 139

Query: 138 WVMHEFRLAGKFAYHFLSTASSKDEWVISRVFKKT 173
           WVMHE+RL GKF+YH++S +S+KDEWV+ +V  K+
Sbjct: 140 WVMHEYRLDGKFSYHYIS-SSAKDEWVLCKVCLKS 173

[Close]

BLAST of Sed0027535 vs. TAIR 10
Match: AT5G61430.1 (NAC domain containing protein 100 )

HSP 1 Score: 256.5 bits (654), Expect = 2.7e-68
Identity = 141/232 (60.78%), Postives = 161/232 (69.40%), Query Frame = 0


Query: 18  LPPGFRFHPTDEELIAHYLLKKVLDSHFSSPAIAHVDLNKSEPWDLPEKAAMGEKEWYFF 77
           LPPGFRFHPTDEELI HYL KKVLD+ FS+ AI  VDLNKSEPW+LP  A MGEKEWYFF
Sbjct: 16  LPPGFRFHPTDEELITHYLHKKVLDTSFSAKAIGEVDLNKSEPWELPWMAKMGEKEWYFF 75

Query: 78  SLRDRKYPTGLRTNRATEAGYWKATGKDREISSSKTNLLVGMKKTLVFYKGRAPKGQKTN 137
            +RDRKYPTGLRTNRATEAGYWKATGKD+EI   K+  LVGMKKTLVFY+GRAPKGQKTN
Sbjct: 76  CVRDRKYPTGLRTNRATEAGYWKATGKDKEIYRGKS--LVGMKKTLVFYRGRAPKGQKTN 135

Query: 138 WVMHEFRLAGKFAYHFLSTASSKDEWVISRVFKKTTSGNGAATHGGAMKKTLPNPEPTSP 197
           WVMHE+RL GKF+ H L   ++K+EWVI RVF+K+  G            +L     T  
Sbjct: 136 WVMHEYRLEGKFSAHNL-PKTAKNEWVICRVFQKSAGGKKIPISSLIRIGSL----GTDF 195

Query: 198 NSSASLPTLLDSSPYPSAAFAAADDPSLHELHVSCFST-------SNLNCFA 243
           N S  LP+L DSSPY        D      ++V CFS        + LNCF+
Sbjct: 196 NPSL-LPSLTDSSPY-------NDKTKTEPVYVPCFSNQTDQNQGTTLNCFS 232

[Close]

BLAST of Sed0027535 vs. TAIR 10
Match: AT5G07680.1 (NAC domain containing protein 80 )

HSP 1 Score: 252.7 bits (644), Expect = 3.9e-67
Identity = 139/234 (59.40%), Postives = 160/234 (68.38%), Query Frame = 0


Query: 18  LPPGFRFHPTDEELIAHYLLKKVLDSHFSSPAIAHVDLNKSEPWDLPEKAAMGEKEWYFF 77
           LPPGFRFHPTDEELI HYL KKVLD  FS+ AI  VDLNK+EPW+LP KA +GEKEWYFF
Sbjct: 17  LPPGFRFHPTDEELITHYLHKKVLDLGFSAKAIGEVDLNKAEPWELPYKAKIGEKEWYFF 76

Query: 78  SLRDRKYPTGLRTNRATEAGYWKATGKDREISSSKTNLLVGMKKTLVFYKGRAPKGQKTN 137
            +RDRKYPTGLRTNRAT+AGYWKATGKD+EI   K+  LVGMKKTLVFY+GRAPKGQKTN
Sbjct: 77  CVRDRKYPTGLRTNRATQAGYWKATGKDKEIFRGKS--LVGMKKTLVFYRGRAPKGQKTN 136

Query: 138 WVMHEFRLAGKFAYHFLSTASSKDEWVISRVFKKTTSGNGAATHGGAMKKTLPNP---EP 197
           WVMHE+RL GK + H L   ++K+EWVI RVF KT  G           K +P       
Sbjct: 137 WVMHEYRLDGKLSAHNL-PKTAKNEWVICRVFHKTAGG-----------KKIPISTLIRI 196

Query: 198 TSPNSSASLPTLLDSSPYPSAAFAAADDPSLHELHVSCFST------SNLNCFA 243
            S  + +SLP L DSSPY        D      ++V CFS       + LNCF+
Sbjct: 197 GSYGTGSSLPPLTDSSPY-------NDKTKTEPVYVPCFSNQAETRGTILNCFS 229

[Close]

BLAST of Sed0027535 vs. TAIR 10
Match: AT5G07680.2 (NAC domain containing protein 80 )

HSP 1 Score: 252.7 bits (644), Expect = 3.9e-67
Identity = 139/234 (59.40%), Postives = 160/234 (68.38%), Query Frame = 0


Query: 18  LPPGFRFHPTDEELIAHYLLKKVLDSHFSSPAIAHVDLNKSEPWDLPEKAAMGEKEWYFF 77
           LPPGFRFHPTDEELI HYL KKVLD  FS+ AI  VDLNK+EPW+LP KA +GEKEWYFF
Sbjct: 3   LPPGFRFHPTDEELITHYLHKKVLDLGFSAKAIGEVDLNKAEPWELPYKAKIGEKEWYFF 62

Query: 78  SLRDRKYPTGLRTNRATEAGYWKATGKDREISSSKTNLLVGMKKTLVFYKGRAPKGQKTN 137
            +RDRKYPTGLRTNRAT+AGYWKATGKD+EI   K+  LVGMKKTLVFY+GRAPKGQKTN
Sbjct: 63  CVRDRKYPTGLRTNRATQAGYWKATGKDKEIFRGKS--LVGMKKTLVFYRGRAPKGQKTN 122

Query: 138 WVMHEFRLAGKFAYHFLSTASSKDEWVISRVFKKTTSGNGAATHGGAMKKTLPNP---EP 197
           WVMHE+RL GK + H L   ++K+EWVI RVF KT  G           K +P       
Sbjct: 123 WVMHEYRLDGKLSAHNL-PKTAKNEWVICRVFHKTAGG-----------KKIPISTLIRI 182

Query: 198 TSPNSSASLPTLLDSSPYPSAAFAAADDPSLHELHVSCFST------SNLNCFA 243
            S  + +SLP L DSSPY        D      ++V CFS       + LNCF+
Sbjct: 183 GSYGTGSSLPPLTDSSPY-------NDKTKTEPVYVPCFSNQAETRGTILNCFS 215

The following BLAST results are available for this feature:

BLAST of Sed0027535 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023543274.1	5.1e-122	74.54	protein CUP-SHAPED COTYLEDON 2-like [Cucurbita pepo subsp. pepo]	[more]
KAG7031044.1	5.7e-121	74.54	Protein CUP-SHAPED COTYLEDON 2, partial [Cucurbita argyrosperma subsp. argyrospe...	[more]
XP_022942010.1	7.4e-121	75.23	protein CUP-SHAPED COTYLEDON 2-like [Cucurbita moschata]	[more]
XP_008456019.1	1.3e-120	74.38	PREDICTED: protein CUP-SHAPED COTYLEDON 2-like [Cucumis melo]	[more]
XP_011651296.1	2.4e-119	72.59	protein CUP-SHAPED COTYLEDON 2 [Cucumis sativus] >KGN57633.1 hypothetical protei...	[more]

BLAST of Sed0027535 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O04017	4.7e-78	63.18	Protein CUP-SHAPED COTYLEDON 2 OS=Arabidopsis thaliana OX=3702 GN=NAC098 PE=1 SV...	[more]
Q9FRV4	8.1e-70	79.35	Protein CUP-SHAPED COTYLEDON 1 OS=Arabidopsis thaliana OX=3702 GN=NAC054 PE=1 SV...	[more]
Q9FLJ2	3.8e-67	60.78	NAC domain-containing protein 100 OS=Arabidopsis thaliana OX=3702 GN=NAC100 PE=2...	[more]
Q9FLR3	5.4e-66	59.40	NAC domain-containing protein 79 OS=Arabidopsis thaliana OX=3702 GN=NAC079 PE=2 ...	[more]
Q9LJW3	2.5e-63	65.64	NAC domain-containing protein 59 OS=Arabidopsis thaliana OX=3702 GN=NAC59 PE=1 S...	[more]

BLAST of Sed0027535 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FVE0	3.6e-121	75.23	protein CUP-SHAPED COTYLEDON 2-like OS=Cucurbita moschata OX=3662 GN=LOC11144720...	[more]
A0A1S3C1U0	6.1e-121	74.38	protein CUP-SHAPED COTYLEDON 2-like OS=Cucumis melo OX=3656 GN=LOC103496071 PE=4...	[more]
A0A0A0L787	1.2e-119	72.59	NAC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G234520 PE=4 SV...	[more]
A0A6J1E4T0	1.3e-118	74.76	protein CUP-SHAPED COTYLEDON 2-like OS=Cucurbita moschata OX=3662 GN=LOC11143060...	[more]
A0A6J1JAG2	5.4e-117	74.12	protein CUP-SHAPED COTYLEDON 2-like OS=Cucurbita maxima OX=3661 GN=LOC111482723 ...	[more]

BLAST of Sed0027535 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G53950.1	3.4e-79	63.18	NAC (No Apical Meristem) domain transcriptional regulator superfamily protein	[more]
AT3G15170.1	5.7e-71	79.35	NAC (No Apical Meristem) domain transcriptional regulator superfamily protein	[more]
AT5G61430.1	2.7e-68	60.78	NAC domain containing protein 100	[more]
AT5G07680.1	3.9e-67	59.40	NAC domain containing protein 80	[more]
AT5G07680.2	3.9e-67	59.40	NAC domain containing protein 80	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003441	NAC domain	PFAM	PF02365	NAM	coord: 19..145 e-value: 3.1E-40 score: 138.0
IPR003441	NAC domain	PROSITE	PS51005	NAC	coord: 18..171 score: 59.458641
IPR036093	NAC domain superfamily	GENE3D	2.170.150.80	NAC domain	coord: 27..175 e-value: 6.7E-58 score: 196.8
IPR036093	NAC domain superfamily	SUPERFAMILY	101941	NAC domain	coord: 17..171
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..20
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 176..204
None	No IPR available	PANTHER	PTHR31744:SF131	PROTEIN CUP-SHAPED COTYLEDON 2-LIKE	coord: 13..236
None	No IPR available	PANTHER	PTHR31744	PROTEIN CUP-SHAPED COTYLEDON 2-RELATED	coord: 13..236

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0027535.1	Sed0027535.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003677	DNA binding