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Sed0027528 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATGCAAAACTTATTCAAGAAAGGAGTGTCATTTTGGCAAATTGGCCAAACTTGAGGGGCAAGAACAAAAGAGAGTTGAGGAGGAAAAGCAATTCTTGTGTTGTTGCAGTGCTCACAAGACCAGCAGAGAGTGGAGTAGTAAATGAAGACACAAGAAAGGCCAACACTGTTTATAGAGACAACTGGTTTGATAAATTAGCCATTGATTATCTATCTCAGGCAGTACAGGCAACTTTAGGTGATTGAATTTTAGTTGCTGTTTTTTTTGGAAGATTAATTTGGAGAAGGGGGGGTAAAGTGGTAAATAAGATGAAATGTTTGTGCAGGTTGGAGAAGCAAAAAGAGTGGATATGAAAGCTTGGTGGATGTGGCAACAATGGCGTCAAGAAATTTTGACAAGATCAAACAAAGAGAGTTTGTCATTGAGGGGCTTCAAAGGGCGTTTCCAAGGCCAATACTCTCTTTGGTAATAAACTTTCATTTCTTCCCATTTTTACCATGTTTACAGGCCATGATACTAATTTTTTACTTTTAAGTTATCAAAACATGTATATTTTATTTTTGACAACTTCTTAAAAATTATTTTATATATAACAAATATTTCTATTTTTACGATCTTCCATTAGTTTCATTTAATTGTTTTCAATGATATCAAAAGTGAGTGAAATGTCTTCGGCTAGTTTTTTTTTTTAATTGAATCAATTTTTAGTGTATTTATTTTTTTCTTCTAGAATTTTCACATCCATGAAATTACTTTAATTTTATAATTATTCATTAAAAAAATCCTCCCAAATCATTCATGTCCATATATAGCTGGGATTTCTTTGCTTGGCCTCTCTTCTCCCATCAACATGTGGAGGACTATAGTTGGGATTTATTGCCTACATTAGAATCTCCCATCAACATGTGGAGGAATATAGTTAGGATTTATTGCCTATATTAGAACCTACTGAACAACAATTCCCTTTTCTATTTTTTCTTTCAATTAATCATTGGGTTTAATAATTACTTGATTGGAAATAAGATCATCAAATGCTCACATTTTCTATTGTTTTTCTTAATATCAACATTTATTCCATTAAACAAGTATTTGAGCTTTACTTTTTACTATAACTAATCCATTTACAAATTATATGTCAACAACTTGTGGTGGACAAAGCGCAGATAAGAACATTGCTACCACAATCCAAATTCGCAAGGGAATATTTTGCTGTGTTCACCACTCTTTTCTTTGCTTGGCTAGTTGGACCCTGCAAGGTAAGATGATGTCAATTTACATAAAGACCCTCTATTTACATAGTATGTTAAGATCAATCCAAGAACGAGTTAAACTCCTCTACGCATGCAAGAATCACATCAATGAATTTTAACATCATCCAAAGTTTACGAATTACATGAGAAGCCTTTCATTTACAAGACAAATGGGAGTAAAAATAAATTAACCTAAGACTTGCTTAAAATTAACTTATTACCATCATTCCAAAATATATATTGCTTCAATGATATGAGAGCCAACACGCGTATTGCTTCAATGACCTAGAAACCAAGAGGTTATGTCTTTGAGTTTGCATTCAAACACGGGATAGGTACGACTCACATTAATTGGTTGTCACTACAGAATCTTTCCACGAGTGCAAGAACAATTATTCATGCCCAACACTGCCATTTCAGATCTCTGTCATAGACTTTTGGCAGAATAGAGACTATTTGAACAAAGTAATGGTGGACATTGAGAACTTCAACTTTAACGCTGAATTCAATATAAAATAATATGATTTTCAACAGCCAAGTTGAAAAACCTGCGGTGTTTGAGGCACTAGCCTCTAGTAGACCTGTTCCTGTCCCTACAAATCGTAAATAGACGAACCAATTCTCTTCATAATCTTTCTCTTTGGCCCTTTCACTTTCTATGCATTCCTTGCGAACTCAATCCGGCATAGCCAATGTATCTAGTTTGTAGGGTAGGGGTTCAAGAAGATTTTGAAGCAGAACATCTAATAAACACAAGTAGTAGCCAATCCCAACGCACACACATATATAAGTTTTTAATCACTAATTTGTAAGACTAATAATTGTAATATATGATTCTTACAGGTGAAGGAATCAGAATTCAATGGAAAAAGAGAAAAGAATGTTGTTCAGATCCACAAGTGCAGGTAATTTTTTTTTCTCGTATCAGAGTTCTATAATTGAGGTAATGCTACTTAGCCGTTCATAGGTTCCAATCTCACCTAGCTATCTGAGAGTCTGAAACACTTTCAACGCCCACAGAACAATCTGTCTATGATTGTTATGCTTCTTCTAAACCCTCAGTACTCATTCACTCACATCATTGATAACTTGAAATTATCACAGCCAAAAATGCCATTCAGAAAATCTCTATTGCCCCTAAACATATCCTATTCATTTGCAGGTTCCTAGAGCAAACTAACTGTGCTGGAATGTGCATTAATCTATGCAAGTTTCCAAGTCAGGATTTCATCAAGGATTCATTGGGAATGCCTGTCAGTATGGTACCCAGTAAGTCTCCTCACTAAGCTACAGAATCACCAAACAATTGCAGCAAATATTTTCTTCCCAAAAGAAAAAGAAAGTTTAAAGTTAACGTATACTGCTGCTTAAGGCAAATCTGGACAATAATTCAAGTTGTCCAACAATAACCGAGGGCTACTGGGTATTATTTTTCTTCTCTTATCTGTGAGTGTTTGAGTCATGTTGGACACACTTCTACTATTATTCTTACAAGGACAATTATATTTGGTGACTAGCTGGCTACCATGACTTCAACTCATTTCTTCTAATCCCTTTACTATTTACATTGGTTCCTATTGGCCATTAGGATAAATCATGGTGATTAACTGAAAGCCATGATTAAAACTTCATATTCACATGTTGAGGAATGTTAGAAATTAAGGGATTAAATTATTTCAACTGCATCTATGAGGACATTGAATAAAGTAAATCAGCTATCGCACAATGACTGGTAGATCCATAAGCAAAAGTGAAATTACTATTAAAGCAATTACCAGCACCAAATGAGGATCATGTTAATGGAGTGGAGGGTCCCATGCATGAACCATTTTGGGTGCAAATGAAATGTAGATAGGCCCCATCCAAGTTAAGTGGGATTTCTAACCTGCAGCTTAATATTGCAATATGGCTATAATCCAAGAATTAGAAGTTGAATTTCCAACGTTAATTAGTCATCCAGCTGAATCTCCAATGAACCAAACAACGCTCTCACCCATAATATGTAAAAACTGCAACAAAGCAGAGGCATTAATATTCTCATGTTAATTCAGCATCATGATGTAATAACTAGCTGGTAGCCATTAGGATTGGTGTCCATGACCAATAAACACATCAATATGCAAGAGAAATTTGGGAGGGAAAAAGGCTTCATAATATGATTCAAACAACCGTGTGTTTTTGTAAGCAGATTTTGATGACATGAGTTGTGAGATGATATTTGGACAGGAACCACCAGCTCCAACCGATGATCCAGTGCTTAAGCAACCGTGTTATAAACTATGTAGGCTTCTTCTTCCTTTTTCTTATTATACCTTTATTTCATTATCTGCAAGTGGAAAAGTCAAACATATCAAAATAATTCACTTGGCATGGAAGCAGGTTCTAATGAGATGTTATGGGGGATGGTAATATAAGTTAAAAATGAATTCTAACCTTATTCGTCTACTTATTTCAGGCAAAACGAAAGAAAAACACATGACAAACTGA ATGGATGCAAAACTTATTCAAGAAAGGAGTGTCATTTTGGCAAATTGGCCAAACTTGAGGGGCAAGAACAAAAGAGAGTTGAGGAGGAAAAGCAATTCTTGTGTTGTTGCAGTGCTCACAAGACCAGCAGAGAGTGGAGTAGTAAATGAAGACACAAGAAAGGCCAACACTGTTTATAGAGACAACTGGTTTGATAAATTAGCCATTGATTATCTATCTCAGGCAGTACAGGCAACTTTAGGTTGGAGAAGCAAAAAGAGTGGATATGAAAGCTTGGTGGATGTGGCAACAATGGCGTCAAGAAATTTTGACAAGATCAAACAAAGAGAGTTTGTCATTGAGGGGCTTCAAAGGGCGTTTCCAAGGCCAATACTCTCTTTGATAAGAACATTGCTACCACAATCCAAATTCGCAAGGGAATATTTTGCTGTGTTCACCACTCTTTTCTTTGCTTGGCTAGTTGGACCCTGCAAGGTGAAGGAATCAGAATTCAATGGAAAAAGAGAAAAGAATGTTGTTCAGATCCACAAGTGCAGGTTCCTAGAGCAAACTAACTGTGCTGGAATGTGCATTAATCTATGCAAGTTTCCAAGTCAGGATTTCATCAAGGATTCATTGGGAATGCCTGTCAGTATGGTACCCAATTTTGATGACATGAGTTGTGAGATGATATTTGGACAGGAACCACCAGCTCCAACCGATGATCCAGTGCTTAAGCAACCGTGTTATAAACTATGCAAAACGAAAGAAAAACACATGACAAACTGA ATGGATGCAAAACTTATTCAAGAAAGGAGTGTCATTTTGGCAAATTGGCCAAACTTGAGGGGCAAGAACAAAAGAGAGTTGAGGAGGAAAAGCAATTCTTGTGTTGTTGCAGTGCTCACAAGACCAGCAGAGAGTGGAGTAGTAAATGAAGACACAAGAAAGGCCAACACTGTTTATAGAGACAACTGGTTTGATAAATTAGCCATTGATTATCTATCTCAGGCAGTACAGGCAACTTTAGGTTGGAGAAGCAAAAAGAGTGGATATGAAAGCTTGGTGGATGTGGCAACAATGGCGTCAAGAAATTTTGACAAGATCAAACAAAGAGAGTTTGTCATTGAGGGGCTTCAAAGGGCGTTTCCAAGGCCAATACTCTCTTTGATAAGAACATTGCTACCACAATCCAAATTCGCAAGGGAATATTTTGCTGTGTTCACCACTCTTTTCTTTGCTTGGCTAGTTGGACCCTGCAAGGTGAAGGAATCAGAATTCAATGGAAAAAGAGAAAAGAATGTTGTTCAGATCCACAAGTGCAGGTTCCTAGAGCAAACTAACTGTGCTGGAATGTGCATTAATCTATGCAAGTTTCCAAGTCAGGATTTCATCAAGGATTCATTGGGAATGCCTGTCAGTATGGTACCCAATTTTGATGACATGAGTTGTGAGATGATATTTGGACAGGAACCACCAGCTCCAACCGATGATCCAGTGCTTAAGCAACCGTGTTATAAACTATGCAAAACGAAAGAAAAACACATGACAAACTGA MDAKLIQERSVILANWPNLRGKNKRELRRKSNSCVVAVLTRPAESGVVNEDTRKANTVYRDNWFDKLAIDYLSQAVQATLGWRSKKSGYESLVDVATMASRNFDKIKQREFVIEGLQRAFPRPILSLIRTLLPQSKFAREYFAVFTTLFFAWLVGPCKVKESEFNGKREKNVVQIHKCRFLEQTNCAGMCINLCKFPSQDFIKDSLGMPVSMVPNFDDMSCEMIFGQEPPAPTDDPVLKQPCYKLCKTKEKHMTN Homology
BLAST of Sed0027528 vs. NCBI nr
Match: XP_023534254.1 (beta-carotene isomerase D27, chloroplastic-like isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 419.5 bits (1077), Expect = 2.1e-113 Identity = 203/254 (79.92%), Postives = 222/254 (87.40%), Query Frame = 0
BLAST of Sed0027528 vs. NCBI nr
Match: XP_022931142.1 (beta-carotene isomerase D27, chloroplastic-like isoform X2 [Cucurbita moschata]) HSP 1 Score: 418.7 bits (1075), Expect = 3.6e-113 Identity = 203/255 (79.61%), Postives = 223/255 (87.45%), Query Frame = 0
BLAST of Sed0027528 vs. NCBI nr
Match: XP_022995501.1 (beta-carotene isomerase D27, chloroplastic-like isoform X2 [Cucurbita maxima]) HSP 1 Score: 417.9 bits (1073), Expect = 6.2e-113 Identity = 202/253 (79.84%), Postives = 222/253 (87.75%), Query Frame = 0
BLAST of Sed0027528 vs. NCBI nr
Match: XP_038888067.1 (beta-carotene isomerase D27, chloroplastic isoform X2 [Benincasa hispida]) HSP 1 Score: 416.8 bits (1070), Expect = 1.4e-112 Identity = 206/256 (80.47%), Postives = 227/256 (88.67%), Query Frame = 0
BLAST of Sed0027528 vs. NCBI nr
Match: XP_023534253.1 (beta-carotene isomerase D27, chloroplastic-like isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 413.7 bits (1062), Expect = 1.2e-111 Identity = 203/259 (78.38%), Postives = 222/259 (85.71%), Query Frame = 0
BLAST of Sed0027528 vs. ExPASy Swiss-Prot
Match: R4HZ96 (Beta-carotene isomerase D27, chloroplastic OS=Medicago truncatula OX=3880 GN=D27 PE=1 SV=1) HSP 1 Score: 326.6 bits (836), Expect = 2.4e-88 Identity = 157/257 (61.09%), Postives = 197/257 (76.65%), Query Frame = 0
BLAST of Sed0027528 vs. ExPASy Swiss-Prot
Match: C7AU21 (Beta-carotene isomerase D27, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=D27 PE=1 SV=1) HSP 1 Score: 261.9 bits (668), Expect = 7.4e-69 Identity = 134/245 (54.69%), Postives = 164/245 (66.94%), Query Frame = 0
BLAST of Sed0027528 vs. ExPASy Swiss-Prot
Match: Q7XA78 (Beta-carotene isomerase D27, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=D27 PE=1 SV=1) HSP 1 Score: 235.3 bits (599), Expect = 7.4e-61 Identity = 110/205 (53.66%), Postives = 149/205 (72.68%), Query Frame = 0
BLAST of Sed0027528 vs. ExPASy TrEMBL
Match: A0A6J1ESQ1 (beta-carotene isomerase D27, chloroplastic-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111437410 PE=4 SV=1) HSP 1 Score: 418.7 bits (1075), Expect = 1.7e-113 Identity = 203/255 (79.61%), Postives = 223/255 (87.45%), Query Frame = 0
BLAST of Sed0027528 vs. ExPASy TrEMBL
Match: A0A6J1K233 (beta-carotene isomerase D27, chloroplastic-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111491020 PE=4 SV=1) HSP 1 Score: 417.9 bits (1073), Expect = 3.0e-113 Identity = 202/253 (79.84%), Postives = 222/253 (87.75%), Query Frame = 0
BLAST of Sed0027528 vs. ExPASy TrEMBL
Match: A0A6J1ESU9 (beta-carotene isomerase D27, chloroplastic-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111437410 PE=4 SV=1) HSP 1 Score: 412.9 bits (1060), Expect = 9.6e-112 Identity = 203/260 (78.08%), Postives = 223/260 (85.77%), Query Frame = 0
BLAST of Sed0027528 vs. ExPASy TrEMBL
Match: A0A6J1K5Z4 (beta-carotene isomerase D27, chloroplastic-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111491020 PE=4 SV=1) HSP 1 Score: 412.1 bits (1058), Expect = 1.6e-111 Identity = 202/258 (78.29%), Postives = 222/258 (86.05%), Query Frame = 0
BLAST of Sed0027528 vs. ExPASy TrEMBL
Match: A0A6J1HUP9 (beta-carotene isomerase D27, chloroplastic-like isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111466998 PE=4 SV=1) HSP 1 Score: 408.7 bits (1049), Expect = 1.8e-110 Identity = 199/256 (77.73%), Postives = 226/256 (88.28%), Query Frame = 0
BLAST of Sed0027528 vs. TAIR 10
Match: AT1G03055.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G64680.1); Has 143 Blast hits to 143 proteins in 26 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 0; Plants - 122; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). ) HSP 1 Score: 235.3 bits (599), Expect = 5.3e-62 Identity = 110/205 (53.66%), Postives = 149/205 (72.68%), Query Frame = 0
BLAST of Sed0027528 vs. TAIR 10
Match: AT1G64680.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G03055.1); Has 146 Blast hits to 146 proteins in 26 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 0; Plants - 125; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). ) HSP 1 Score: 157.9 bits (398), Expect = 1.1e-38 Identity = 85/225 (37.78%), Postives = 126/225 (56.00%), Query Frame = 0
BLAST of Sed0027528 vs. TAIR 10
Match: AT1G03055.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G64680.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 131.3 bits (329), Expect = 1.1e-30 Identity = 67/132 (50.76%), Postives = 89/132 (67.42%), Query Frame = 0
BLAST of Sed0027528 vs. TAIR 10
Match: AT4G01995.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G64680.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 117.5 bits (293), Expect = 1.6e-26 Identity = 69/211 (32.70%), Postives = 105/211 (49.76%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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