
Sed0027519 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTCGCCGTCAAGCTCTTCTCTCCGCCGGTGGCCTCCGTCCAAGTCGCCACCGGATCCCGCCGCTCCTCCGCCAGTTTCTACGACGTCCTCCGCATCCACCACAACGCCTCCTCCGTCGAGATCAAGACCGCCTACCGGACTCTAGCCAAGATCTACCATCCAGATTCCGCCGGCAAATCATCCGACGGCTGCGATTCCTCCTCTGATCGCGATCGATGCAGTTTCCTCGAGATTCACGACGCGTACCAGACGCTCTCCGATCCTGCTTCCAGAGCTCATTATGACCTTTCTTTGGCCGCTCTTACCAGACGCCCGTTTCTCCGATCGCGGTCCAGGCCGCTCCGCCGCTGGGAAACGGATCAGTGCTGGTAATGGAGTTTGTAAATTTGGTGTTGTATTTGTTTTTGTGGTTTTTTTTTTTGTACAGTGCTGTTTTGAATGTTCTTATTGGAGGAACTTCTTTTTTGCGGCTAGTTTTTGATTTGATCTTTATCTTGATCTTGATCTTGATCTGTTGTTGTTCTGTTTGTGGAATTTTGAATGCTGAAGAAGAACTTGATCGAAAAATGCGTTTAGACTTAATTTTGAAGCGAAAATGA ATGTTCGCCGTCAAGCTCTTCTCTCCGCCGGTGGCCTCCGTCCAAGTCGCCACCGGATCCCGCCGCTCCTCCGCCAGTTTCTACGACGTCCTCCGCATCCACCACAACGCCTCCTCCGTCGAGATCAAGACCGCCTACCGGACTCTAGCCAAGATCTACCATCCAGATTCCGCCGGCAAATCATCCGACGGCTGCGATTCCTCCTCTGATCGCGATCGATGCAGTTTCCTCGAGATTCACGACGCGTACCAGACGCTCTCCGATCCTGCTTCCAGAGCTCATTATGACCTTTCTTTGGCCGCTCTTACCAGACGCCCGTTTCTCCGATCGCGGTCCAGGCCGCTCCGCCGCTGGGAAACGGATCAGTGCTGTGCTGTTTTGAATGTTCTTATTGGAGGAACTTCTTTTTTGCGGCTAGTTTTTGATTTGATCTTTATCTTGATCTTGATCTTGATCTGTTGTTGTTCTGTTTGTGGAATTTTGAATGCTGAAGAAGAACTTGATCGAAAAATGCGTTTAGACTTAATTTTGAAGCGAAAATGA ATGTTCGCCGTCAAGCTCTTCTCTCCGCCGGTGGCCTCCGTCCAAGTCGCCACCGGATCCCGCCGCTCCTCCGCCAGTTTCTACGACGTCCTCCGCATCCACCACAACGCCTCCTCCGTCGAGATCAAGACCGCCTACCGGACTCTAGCCAAGATCTACCATCCAGATTCCGCCGGCAAATCATCCGACGGCTGCGATTCCTCCTCTGATCGCGATCGATGCAGTTTCCTCGAGATTCACGACGCGTACCAGACGCTCTCCGATCCTGCTTCCAGAGCTCATTATGACCTTTCTTTGGCCGCTCTTACCAGACGCCCGTTTCTCCGATCGCGGTCCAGGCCGCTCCGCCGCTGGGAAACGGATCAGTGCTGTGCTGTTTTGAATGTTCTTATTGGAGGAACTTCTTTTTTGCGGCTAGTTTTTGATTTGATCTTTATCTTGATCTTGATCTTGATCTGTTGTTGTTCTGTTTGTGGAATTTTGAATGCTGAAGAAGAACTTGATCGAAAAATGCGTTTAGACTTAATTTTGAAGCGAAAATGA MFAVKLFSPPVASVQVATGSRRSSASFYDVLRIHHNASSVEIKTAYRTLAKIYHPDSAGKSSDGCDSSSDRDRCSFLEIHDAYQTLSDPASRAHYDLSLAALTRRPFLRSRSRPLRRWETDQCCAVLNVLIGGTSFLRLVFDLIFILILILICCCSVCGILNAEEELDRKMRLDLILKRK Homology
BLAST of Sed0027519 vs. NCBI nr
Match: XP_023525212.1 (chaperone protein dnaJ 11, chloroplastic-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 193.0 bits (489), Expect = 2.3e-45 Identity = 99/123 (80.49%), Postives = 108/123 (87.80%), Query Frame = 0
BLAST of Sed0027519 vs. NCBI nr
Match: XP_022940753.1 (chaperone protein dnaJ 11, chloroplastic-like [Cucurbita moschata] >KAG6607725.1 Chaperone protein dnaJ 11, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] >KAG7037299.1 Chaperone protein dnaJ 11, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 191.8 bits (486), Expect = 5.1e-45 Identity = 98/123 (79.67%), Postives = 108/123 (87.80%), Query Frame = 0
BLAST of Sed0027519 vs. NCBI nr
Match: XP_022981701.1 (chaperone protein dnaJ 11, chloroplastic-like [Cucurbita maxima]) HSP 1 Score: 185.7 bits (470), Expect = 3.6e-43 Identity = 94/123 (76.42%), Postives = 106/123 (86.18%), Query Frame = 0
BLAST of Sed0027519 vs. NCBI nr
Match: KAG6592124.1 (Protein DNA-DAMAGE INDUCIBLE 1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 179.9 bits (455), Expect = 2.0e-41 Identity = 93/128 (72.66%), Postives = 106/128 (82.81%), Query Frame = 0
BLAST of Sed0027519 vs. NCBI nr
Match: XP_038899108.1 (chaperone protein dnaJ 11, chloroplastic [Benincasa hispida]) HSP 1 Score: 179.1 bits (453), Expect = 3.4e-41 Identity = 96/125 (76.80%), Postives = 110/125 (88.00%), Query Frame = 0
BLAST of Sed0027519 vs. ExPASy Swiss-Prot
Match: Q9FYB5 (Chaperone protein dnaJ 11, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ATJ11 PE=1 SV=2) HSP 1 Score: 75.1 bits (183), Expect = 9.1e-13 Identity = 51/111 (45.95%), Postives = 60/111 (54.05%), Query Frame = 0
BLAST of Sed0027519 vs. ExPASy Swiss-Prot
Match: Q9KD71 (Chaperone protein DnaJ OS=Bacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125) OX=272558 GN=dnaJ PE=3 SV=1) HSP 1 Score: 61.6 bits (148), Expect = 1.0e-08 Identity = 33/74 (44.59%), Postives = 44/74 (59.46%), Query Frame = 0
BLAST of Sed0027519 vs. ExPASy Swiss-Prot
Match: Q67S53 (Chaperone protein DnaJ OS=Symbiobacterium thermophilum (strain T / IAM 14863) OX=292459 GN=dnaJ PE=3 SV=1) HSP 1 Score: 60.8 bits (146), Expect = 1.8e-08 Identity = 31/76 (40.79%), Postives = 43/76 (56.58%), Query Frame = 0
BLAST of Sed0027519 vs. ExPASy Swiss-Prot
Match: Q5WHG0 (Chaperone protein DnaJ OS=Bacillus clausii (strain KSM-K16) OX=66692 GN=dnaJ PE=3 SV=1) HSP 1 Score: 58.5 bits (140), Expect = 8.8e-08 Identity = 32/74 (43.24%), Postives = 40/74 (54.05%), Query Frame = 0
BLAST of Sed0027519 vs. ExPASy Swiss-Prot
Match: Q74H58 (Chaperone protein DnaJ OS=Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA) OX=243231 GN=dnaJ PE=3 SV=1) HSP 1 Score: 58.5 bits (140), Expect = 8.8e-08 Identity = 33/70 (47.14%), Postives = 42/70 (60.00%), Query Frame = 0
BLAST of Sed0027519 vs. ExPASy TrEMBL
Match: A0A6J1FQ67 (chaperone protein dnaJ 11, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111446259 PE=4 SV=1) HSP 1 Score: 191.8 bits (486), Expect = 2.5e-45 Identity = 98/123 (79.67%), Postives = 108/123 (87.80%), Query Frame = 0
BLAST of Sed0027519 vs. ExPASy TrEMBL
Match: A0A6J1IXA4 (chaperone protein dnaJ 11, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111480764 PE=4 SV=1) HSP 1 Score: 185.7 bits (470), Expect = 1.8e-43 Identity = 94/123 (76.42%), Postives = 106/123 (86.18%), Query Frame = 0
BLAST of Sed0027519 vs. ExPASy TrEMBL
Match: A0A6J1F9T8 (chaperone protein dnaJ 11, chloroplastic-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111443399 PE=4 SV=1) HSP 1 Score: 176.8 bits (447), Expect = 8.2e-41 Identity = 92/127 (72.44%), Postives = 106/127 (83.46%), Query Frame = 0
BLAST of Sed0027519 vs. ExPASy TrEMBL
Match: A0A6J1FEQ6 (chaperone protein dnaJ 11, chloroplastic-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111443399 PE=4 SV=1) HSP 1 Score: 173.7 bits (439), Expect = 6.9e-40 Identity = 91/126 (72.22%), Postives = 105/126 (83.33%), Query Frame = 0
BLAST of Sed0027519 vs. ExPASy TrEMBL
Match: A0A5D3DHW9 (Chaperone protein dnaJ 11 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold142G002580 PE=4 SV=1) HSP 1 Score: 165.2 bits (417), Expect = 2.5e-37 Identity = 89/125 (71.20%), Postives = 101/125 (80.80%), Query Frame = 0
BLAST of Sed0027519 vs. TAIR 10
Match: AT3G13310.1 (Chaperone DnaJ-domain superfamily protein ) HSP 1 Score: 89.7 bits (221), Expect = 2.5e-18 Identity = 53/118 (44.92%), Postives = 68/118 (57.63%), Query Frame = 0
BLAST of Sed0027519 vs. TAIR 10
Match: AT2G17880.1 (Chaperone DnaJ-domain superfamily protein ) HSP 1 Score: 76.6 bits (187), Expect = 2.2e-14 Identity = 52/108 (48.15%), Postives = 64/108 (59.26%), Query Frame = 0
BLAST of Sed0027519 vs. TAIR 10
Match: AT4G36040.1 (Chaperone DnaJ-domain superfamily protein ) HSP 1 Score: 75.1 bits (183), Expect = 6.4e-14 Identity = 51/111 (45.95%), Postives = 60/111 (54.05%), Query Frame = 0
BLAST of Sed0027519 vs. TAIR 10
Match: AT4G13830.1 (DNAJ-like 20 ) HSP 1 Score: 55.5 bits (132), Expect = 5.3e-08 Identity = 31/75 (41.33%), Postives = 45/75 (60.00%), Query Frame = 0
BLAST of Sed0027519 vs. TAIR 10
Match: AT4G13830.2 (DNAJ-like 20 ) HSP 1 Score: 55.5 bits (132), Expect = 5.3e-08 Identity = 31/75 (41.33%), Postives = 45/75 (60.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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