Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAATTACAGAGCTGAAAAGGGAATTTGATGAGTTGAAGGATGTTGGTGAGAAGCAAGAGTTGAGAGTGCGTTATTTTGAGACTAGAGCCTACAACACAGCCATGGCTTACCTTATCTGGGAGAGGTTCTGATACGATCCGTCCGTGGCATTTTAGGAATATTAGTATTTATTAATTAGTAGTTAATTGTTATTTTAAATGTATTGGGCTTGGGCCTATTATTAGTCTTTTATTAATTAGGTCAAATTAAGATTTAGGGCTATAAATAGGAGTTGTTAGGTCATAGTCAAGCATTCATTTGAATAGTCGTATTTTGTACTCTGGCTCTTAGAGAGATCTTCTCGGGAGATTTATCTTAGATTAATAAAATAGTGTGGTAGATCTTATCAGGTTCCTAGTTGCTTTTGCTACTTCTAATTCTAATTCCCTCAATTATTATTGCTCTCATTGGTGGGTGCTTTTGGGGTTCAATCTCTCCTCTACTTTTCTTTACTTGTTGTTCTTCCTTGAGGCTGTTATCATGTTGTATCGGGCTCAGAACCACTTGGACATCATTTTCCACTCACTCGATCAAATCTCCCAACAACTCATCATTCTTAACCAAGTTACTAGCCCAGATCCTGATCATCATCATCCTCATTTGGAGTCTGGGGATTCAGTTTCAAGTATTGCATTTGATTTAAGTTTCCGGGTGCAGCCACTTTATCGGTACCGTCCATATGGTACAATTCTTAACAGGAAACTTTATTTTGCATCCATTCTCTGTGCTCTCCTTGCTCTTACTGCTTTTCAGCTTTGTATCACCTTCAGCTATTCCCTGTGCAACTGA
mRNA sequence
ATGGAAATTACAGAGCTGAAAAGGGAATTTGATGAGTTGAAGGATGTTGGTGAGAAGCAAGAGTTGAGAGTGCGTTATTTTGAGACTAGAGCCTACAACACAGCCATGGCTTACCTTATCTGGGAGAGGTTCCTAGTTGCTTTTGCTACTTCTAATTCTAATTCCCTCAATTATTATTGCTCTCATTGGTGGGTGCTTTTGGGGTTCAATCTCTCCTCTACTTTTCTTTACTTGTTGTTCTTCCTTGAGGCTGTTATCATGTTGTATCGGGCTCAGAACCACTTGGACATCATTTTCCACTCACTCGATCAAATCTCCCAACAACTCATCATTCTTAACCAAGTTACTAGCCCAGATCCTGATCATCATCATCCTCATTTGGAGTCTGGGGATTCAGTTTCAAGTATTGCATTTGATTTAAGTTTCCGGGTGCAGCCACTTTATCGGTACCGTCCATATGGTACAATTCTTAACAGGAAACTTTATTTTGCATCCATTCTCTGTGCTCTCCTTGCTCTTACTGCTTTTCAGCTTTGTATCACCTTCAGCTATTCCCTGTGCAACTGA
Coding sequence (CDS)
ATGGAAATTACAGAGCTGAAAAGGGAATTTGATGAGTTGAAGGATGTTGGTGAGAAGCAAGAGTTGAGAGTGCGTTATTTTGAGACTAGAGCCTACAACACAGCCATGGCTTACCTTATCTGGGAGAGGTTCCTAGTTGCTTTTGCTACTTCTAATTCTAATTCCCTCAATTATTATTGCTCTCATTGGTGGGTGCTTTTGGGGTTCAATCTCTCCTCTACTTTTCTTTACTTGTTGTTCTTCCTTGAGGCTGTTATCATGTTGTATCGGGCTCAGAACCACTTGGACATCATTTTCCACTCACTCGATCAAATCTCCCAACAACTCATCATTCTTAACCAAGTTACTAGCCCAGATCCTGATCATCATCATCCTCATTTGGAGTCTGGGGATTCAGTTTCAAGTATTGCATTTGATTTAAGTTTCCGGGTGCAGCCACTTTATCGGTACCGTCCATATGGTACAATTCTTAACAGGAAACTTTATTTTGCATCCATTCTCTGTGCTCTCCTTGCTCTTACTGCTTTTCAGCTTTGTATCACCTTCAGCTATTCCCTGTGCAACTGA
Protein sequence
MEITELKREFDELKDVGEKQELRVRYFETRAYNTAMAYLIWERFLVAFATSNSNSLNYYCSHWWVLLGFNLSSTFLYLLFFLEAVIMLYRAQNHLDIIFHSLDQISQQLIILNQVTSPDPDHHHPHLESGDSVSSIAFDLSFRVQPLYRYRPYGTILNRKLYFASILCALLALTAFQLCITFSYSLCN
Homology
BLAST of Sed0027503 vs. NCBI nr
Match:
KAA0042578.1 (WD repeat-containing protein 91-like protein [Cucumis melo var. makuwa] >TYK05982.1 WD repeat-containing protein 91-like protein [Cucumis melo var. makuwa])
HSP 1 Score: 146.4 bits (368), Expect = 2.5e-31
Identity = 97/193 (50.26%), Postives = 125/193 (64.77%), Query Frame = 0
Query: 1 MEITELKREFDELKDVGEKQELRVRYFETRAYNTAMAYLIWERFLVA--FATSNSNSLNY 60
M ELKR+FD LK + EKQE RVRY+ETRA N +A LIW R V + S+S SL
Sbjct: 3 MRFQELKRKFDRLKPLAEKQEQRVRYYETRAQNVTIACLIWYRLFVVGMYHISSSLSLLN 62
Query: 61 YCSHWWVLLGFNLSSTFLYLLFFLEAVIMLYRAQNHLDIIFHSLDQISQQLIILNQVTSP 120
H W++LGF+L+ST LYLLFFLEAV MLYRAQN LDII+ ++ISQQ++ +
Sbjct: 63 CTHHLWMVLGFSLASTSLYLLFFLEAVFMLYRAQNQLDIIYKQQNEISQQIL-----NTG 122
Query: 121 DPDHHHPHLESGDSVSSIA--FDLSFRVQPLYRY-RPYGTILNRKLYFASILCALLALTA 180
+PD + E GDS+SS +LSF VQ L+ Y RP T++ RK+Y AS + LLA+ A
Sbjct: 123 NPDDY----EGGDSISSDNGWLELSFEVQLLHEYHRPLFTLVQRKVYIASTISTLLAVAA 182
Query: 181 FQLCITFSYSLCN 189
F++ T LCN
Sbjct: 183 FEV-YTCKLLLCN 185
BLAST of Sed0027503 vs. NCBI nr
Match:
ADN33782.1 (hypothetical protein [Cucumis melo subsp. melo])
HSP 1 Score: 142.1 bits (357), Expect = 4.8e-30
Identity = 102/192 (53.12%), Postives = 127/192 (66.15%), Query Frame = 0
Query: 1 MEITELKREFDELKDVGEKQELRVRYFETRAYNTAMAYLIWERFLVA--FATSNSNSLNY 60
ME+ ELKR FD LK + EKQE RVRY+ETRA N A+A LIW+R V + TS+S SL
Sbjct: 3 MELGELKRNFDGLKLLAEKQEQRVRYYETRAQNVAIACLIWDRLFVVGMYHTSSSLSLLN 62
Query: 61 YCSHWWVLLGFNLSSTFLYLLFFLEAVIMLYRAQNHLDIIFHSLDQISQQLIILNQVTSP 120
H W++LGF+L+ST LYLLFFLEAV MLYRAQN LDII S QI L ILN SP
Sbjct: 63 CTPHLWMVLGFSLASTSLYLLFFLEAVFMLYRAQNQLDII--SKKQIEISLQILN-TGSP 122
Query: 121 DPDHHHPHLESGDSVSSI--AFDLSFRVQPLYRYRPYGTILNRKLYFASILCALLALTAF 180
+ D E+GD+ SS +LSF+VQ L +Y P T++ RK+Y AS + LLA++AF
Sbjct: 123 NDD------EAGDTFSSDNGGLELSFQVQ-LLQYHPL-TVVQRKIYIASTISTLLAVSAF 182
Query: 181 QLCITFSYSLCN 189
++ T LCN
Sbjct: 183 EV-YTCKLLLCN 182
BLAST of Sed0027503 vs. NCBI nr
Match:
KAA0042580.1 (WD repeat-containing protein 91-like protein [Cucumis melo var. makuwa] >TYK05984.1 WD repeat-containing protein 91-like protein [Cucumis melo var. makuwa])
HSP 1 Score: 137.5 bits (345), Expect = 1.2e-28
Identity = 100/192 (52.08%), Postives = 125/192 (65.10%), Query Frame = 0
Query: 1 MEITELKREFDELKDVGEKQELRVRYFETRAYNTAMAYLIWERFLVA--FATSNSNSLNY 60
M++ LKR FD LK + EKQE RVRY+ETRA N A+A LIW+R V + TS+S SL
Sbjct: 3 MDLGVLKRNFDGLKLLAEKQEQRVRYYETRAQNVAIACLIWDRLFVVGMYHTSSSLSLLN 62
Query: 61 YCSHWWVLLGFNLSSTFLYLLFFLEAVIMLYRAQNHLDIIFHSLDQISQQLIILNQVTSP 120
H W++LGF+L+ST LYLLFFLEAV MLYRAQN LDII S QI L ILN SP
Sbjct: 63 CTPHLWMVLGFSLASTSLYLLFFLEAVFMLYRAQNQLDII--SKRQIEISLQILN-TGSP 122
Query: 121 DPDHHHPHLESGDSVSSI--AFDLSFRVQPLYRYRPYGTILNRKLYFASILCALLALTAF 180
+ D E+GD+ SS +LSF+VQ L +Y P T++ RK+Y AS + LLA+ AF
Sbjct: 123 NDD------EAGDTFSSDNGGLELSFQVQ-LLQYHPL-TVVQRKIYIASTISTLLAVAAF 182
Query: 181 QLCITFSYSLCN 189
++ T LCN
Sbjct: 183 EV-YTCKLLLCN 182
BLAST of Sed0027503 vs. NCBI nr
Match:
XP_022157130.1 (uncharacterized protein LOC111023927 [Momordica charantia])
HSP 1 Score: 122.1 bits (305), Expect = 5.1e-24
Identity = 83/178 (46.63%), Postives = 108/178 (60.67%), Query Frame = 0
Query: 1 MEITELKREFDELKDVGEKQELRVRYFETRAYNTAMAYLIWERFLVAFATSNSNSLNYYC 60
ME ELKR F+ LKD+ EKQE RV+Y E+RA N MAYLIW R L FA S ++S C
Sbjct: 1 MEFGELKRNFEALKDLVEKQESRVQYHESRAQNITMAYLIWGR-LFFFAISQTSSSLLKC 60
Query: 61 SHWWVLLGFNLSSTFLYLLFFLEAVIMLYRAQNHLDIIFHSLDQISQQLIILNQVTSPDP 120
WW++LG ++S F+Y LFFLEAV MLYR Q+ +DII +I QQ++ V
Sbjct: 61 IDWWMVLGLSVSCAFVYFLFFLEAVTMLYRVQHQMDIICKEQAEICQQIL----VARSQL 120
Query: 121 DHHHPHLESGDSVSSIAFDLSFRVQPLYRYRPYGTILNRKLYFASILCALLALTAFQL 179
D +E+GD SS F SF V+ L Y + I+ RK Y + + ALLA+TA +L
Sbjct: 121 DDVDLAMEAGD--SSDGFQFSFHVK-LLEYGAF-RIVERKFYICATVSALLAVTAIEL 169
BLAST of Sed0027503 vs. NCBI nr
Match:
XP_008437551.1 (PREDICTED: uncharacterized protein LOC103482931 [Cucumis melo])
HSP 1 Score: 119.0 bits (297), Expect = 4.4e-23
Identity = 82/147 (55.78%), Postives = 98/147 (66.67%), Query Frame = 0
Query: 1 MEITELKREFDELKDVGEKQELRVRYFETRAYNTAMAYLIWERFLVA--FATSNSNSLNY 60
ME+ ELKR FD LK + EKQE RVRY+ETRA N A+A LIW+R V + TS+S SL
Sbjct: 3 MELGELKRNFDGLKLLAEKQEQRVRYYETRAQNVAIACLIWDRLFVVGMYHTSSSLSLLN 62
Query: 61 YCSHWWVLLGFNLSSTFLYLLFFLEAVIMLYRAQNHLDIIFHSLDQISQQLIILNQVTSP 120
H W++LGF+L+ST LYLLFFLEAV MLYRAQN LDII S QI L ILN SP
Sbjct: 63 CTPHLWMVLGFSLASTSLYLLFFLEAVFMLYRAQNQLDII--SKKQIEISLQILN-TGSP 122
Query: 121 DPDHHHPHLESGDSVSSI--AFDLSFR 144
+ D E+GD+ SS +LSF+
Sbjct: 123 NDD------EAGDTFSSDNGGLELSFQ 140
BLAST of Sed0027503 vs. ExPASy TrEMBL
Match:
A0A5D3C430 (WD repeat-containing protein 91-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G00780 PE=4 SV=1)
HSP 1 Score: 146.4 bits (368), Expect = 1.2e-31
Identity = 97/193 (50.26%), Postives = 125/193 (64.77%), Query Frame = 0
Query: 1 MEITELKREFDELKDVGEKQELRVRYFETRAYNTAMAYLIWERFLVA--FATSNSNSLNY 60
M ELKR+FD LK + EKQE RVRY+ETRA N +A LIW R V + S+S SL
Sbjct: 3 MRFQELKRKFDRLKPLAEKQEQRVRYYETRAQNVTIACLIWYRLFVVGMYHISSSLSLLN 62
Query: 61 YCSHWWVLLGFNLSSTFLYLLFFLEAVIMLYRAQNHLDIIFHSLDQISQQLIILNQVTSP 120
H W++LGF+L+ST LYLLFFLEAV MLYRAQN LDII+ ++ISQQ++ +
Sbjct: 63 CTHHLWMVLGFSLASTSLYLLFFLEAVFMLYRAQNQLDIIYKQQNEISQQIL-----NTG 122
Query: 121 DPDHHHPHLESGDSVSSIA--FDLSFRVQPLYRY-RPYGTILNRKLYFASILCALLALTA 180
+PD + E GDS+SS +LSF VQ L+ Y RP T++ RK+Y AS + LLA+ A
Sbjct: 123 NPDDY----EGGDSISSDNGWLELSFEVQLLHEYHRPLFTLVQRKVYIASTISTLLAVAA 182
Query: 181 FQLCITFSYSLCN 189
F++ T LCN
Sbjct: 183 FEV-YTCKLLLCN 185
BLAST of Sed0027503 vs. ExPASy TrEMBL
Match:
E5GBE1 (Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)
HSP 1 Score: 142.1 bits (357), Expect = 2.3e-30
Identity = 102/192 (53.12%), Postives = 127/192 (66.15%), Query Frame = 0
Query: 1 MEITELKREFDELKDVGEKQELRVRYFETRAYNTAMAYLIWERFLVA--FATSNSNSLNY 60
ME+ ELKR FD LK + EKQE RVRY+ETRA N A+A LIW+R V + TS+S SL
Sbjct: 3 MELGELKRNFDGLKLLAEKQEQRVRYYETRAQNVAIACLIWDRLFVVGMYHTSSSLSLLN 62
Query: 61 YCSHWWVLLGFNLSSTFLYLLFFLEAVIMLYRAQNHLDIIFHSLDQISQQLIILNQVTSP 120
H W++LGF+L+ST LYLLFFLEAV MLYRAQN LDII S QI L ILN SP
Sbjct: 63 CTPHLWMVLGFSLASTSLYLLFFLEAVFMLYRAQNQLDII--SKKQIEISLQILN-TGSP 122
Query: 121 DPDHHHPHLESGDSVSSI--AFDLSFRVQPLYRYRPYGTILNRKLYFASILCALLALTAF 180
+ D E+GD+ SS +LSF+VQ L +Y P T++ RK+Y AS + LLA++AF
Sbjct: 123 NDD------EAGDTFSSDNGGLELSFQVQ-LLQYHPL-TVVQRKIYIASTISTLLAVSAF 182
Query: 181 QLCITFSYSLCN 189
++ T LCN
Sbjct: 183 EV-YTCKLLLCN 182
BLAST of Sed0027503 vs. ExPASy TrEMBL
Match:
A0A5A7TGW8 (WD repeat-containing protein 91-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G00800 PE=4 SV=1)
HSP 1 Score: 137.5 bits (345), Expect = 5.7e-29
Identity = 100/192 (52.08%), Postives = 125/192 (65.10%), Query Frame = 0
Query: 1 MEITELKREFDELKDVGEKQELRVRYFETRAYNTAMAYLIWERFLVA--FATSNSNSLNY 60
M++ LKR FD LK + EKQE RVRY+ETRA N A+A LIW+R V + TS+S SL
Sbjct: 3 MDLGVLKRNFDGLKLLAEKQEQRVRYYETRAQNVAIACLIWDRLFVVGMYHTSSSLSLLN 62
Query: 61 YCSHWWVLLGFNLSSTFLYLLFFLEAVIMLYRAQNHLDIIFHSLDQISQQLIILNQVTSP 120
H W++LGF+L+ST LYLLFFLEAV MLYRAQN LDII S QI L ILN SP
Sbjct: 63 CTPHLWMVLGFSLASTSLYLLFFLEAVFMLYRAQNQLDII--SKRQIEISLQILN-TGSP 122
Query: 121 DPDHHHPHLESGDSVSSI--AFDLSFRVQPLYRYRPYGTILNRKLYFASILCALLALTAF 180
+ D E+GD+ SS +LSF+VQ L +Y P T++ RK+Y AS + LLA+ AF
Sbjct: 123 NDD------EAGDTFSSDNGGLELSFQVQ-LLQYHPL-TVVQRKIYIASTISTLLAVAAF 182
Query: 181 QLCITFSYSLCN 189
++ T LCN
Sbjct: 183 EV-YTCKLLLCN 182
BLAST of Sed0027503 vs. ExPASy TrEMBL
Match:
A0A0A0KM15 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G139820 PE=4 SV=1)
HSP 1 Score: 137.5 bits (345), Expect = 5.7e-29
Identity = 102/192 (53.12%), Postives = 124/192 (64.58%), Query Frame = 0
Query: 1 MEITELKREFDELKDVGEKQELRVRYFETRAYNTAMAYLIWER--FLVAFATSNSNSLNY 60
ME ELKR+FD LK + EKQE RVRY+ETRA N A+A LIW+R F+ + TS+S SL
Sbjct: 3 MEFGELKRKFDGLKFLAEKQEQRVRYYETRAQNLAIASLIWDRLFFVGMYHTSSSLSLLN 62
Query: 61 YCSHWWVLLGFNLSSTFLYLLFFLEAVIMLYRAQNHLDIIFHSLDQISQQLIILNQVTSP 120
H W++ F LSST LY LFFLEAV MLYRAQN LDII S QI L ILN SP
Sbjct: 63 CTHHLWMVFSFILSSTSLYFLFFLEAVFMLYRAQNQLDII--SKKQIEISLQILN-TGSP 122
Query: 121 DPDHHHPHLESGDSVSSIA--FDLSFRVQPLYRYRPYGTILNRKLYFASILCALLALTAF 180
+ D E+GDS+SS +LSF+VQ L Y P+ T++ RK+Y AS + LLA+ AF
Sbjct: 123 NDD------EAGDSISSDNGWLELSFQVQ-LLPYHPF-TLVQRKVYIASTIFTLLAVAAF 182
Query: 181 QLCITFSYSLCN 189
+L T LCN
Sbjct: 183 EL-YTCKLLLCN 182
BLAST of Sed0027503 vs. ExPASy TrEMBL
Match:
A0A6J1DS87 (uncharacterized protein LOC111023927 OS=Momordica charantia OX=3673 GN=LOC111023927 PE=4 SV=1)
HSP 1 Score: 122.1 bits (305), Expect = 2.5e-24
Identity = 83/178 (46.63%), Postives = 108/178 (60.67%), Query Frame = 0
Query: 1 MEITELKREFDELKDVGEKQELRVRYFETRAYNTAMAYLIWERFLVAFATSNSNSLNYYC 60
ME ELKR F+ LKD+ EKQE RV+Y E+RA N MAYLIW R L FA S ++S C
Sbjct: 1 MEFGELKRNFEALKDLVEKQESRVQYHESRAQNITMAYLIWGR-LFFFAISQTSSSLLKC 60
Query: 61 SHWWVLLGFNLSSTFLYLLFFLEAVIMLYRAQNHLDIIFHSLDQISQQLIILNQVTSPDP 120
WW++LG ++S F+Y LFFLEAV MLYR Q+ +DII +I QQ++ V
Sbjct: 61 IDWWMVLGLSVSCAFVYFLFFLEAVTMLYRVQHQMDIICKEQAEICQQIL----VARSQL 120
Query: 121 DHHHPHLESGDSVSSIAFDLSFRVQPLYRYRPYGTILNRKLYFASILCALLALTAFQL 179
D +E+GD SS F SF V+ L Y + I+ RK Y + + ALLA+TA +L
Sbjct: 121 DDVDLAMEAGD--SSDGFQFSFHVK-LLEYGAF-RIVERKFYICATVSALLAVTAIEL 169
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAA0042578.1 | 2.5e-31 | 50.26 | WD repeat-containing protein 91-like protein [Cucumis melo var. makuwa] >TYK0598... | [more] |
ADN33782.1 | 4.8e-30 | 53.13 | hypothetical protein [Cucumis melo subsp. melo] | [more] |
KAA0042580.1 | 1.2e-28 | 52.08 | WD repeat-containing protein 91-like protein [Cucumis melo var. makuwa] >TYK0598... | [more] |
XP_022157130.1 | 5.1e-24 | 46.63 | uncharacterized protein LOC111023927 [Momordica charantia] | [more] |
XP_008437551.1 | 4.4e-23 | 55.78 | PREDICTED: uncharacterized protein LOC103482931 [Cucumis melo] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5D3C430 | 1.2e-31 | 50.26 | WD repeat-containing protein 91-like protein OS=Cucumis melo var. makuwa OX=1194... | [more] |
E5GBE1 | 2.3e-30 | 53.13 | Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1 | [more] |
A0A5A7TGW8 | 5.7e-29 | 52.08 | WD repeat-containing protein 91-like protein OS=Cucumis melo var. makuwa OX=1194... | [more] |
A0A0A0KM15 | 5.7e-29 | 53.13 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G139820 PE=4 SV=1 | [more] |
A0A6J1DS87 | 2.5e-24 | 46.63 | uncharacterized protein LOC111023927 OS=Momordica charantia OX=3673 GN=LOC111023... | [more] |
Match Name | E-value | Identity | Description | |