Sed0027496 (gene) Chayote v1

Overview


Name	Sed0027496
Type	gene
Organism	Sechium edule (Chayote v1)
Description	ran-binding protein 1 homolog a-like
Location	LG01: 8742536 .. 8745627 (+)
RNA-Seq Expression	Sed0027496
Synteny	Sed0027496

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAACATTGAGTCGGTTCTCAAGGCGGGAGAGATTTTGTTCGGCTCGAACCGAACCAAGCCGACCAGTGTAGAGCATTTTGTCACTCATTTCTCCACTTCCCTTTCCTCCGAATATATATATAAACCCTACATTCTGAAGCATCCTTTTCCCAATTTCGATCCATTTCATCATCTTCGTTGTACCCAAACCCTAAATCCTCTTCCATGGCCAGCAGCGACACCGAACGCAGAGAAGACGAGGAGGCTCCAGCCGGAGAGGATGAAGACACCGGAGCTCAAGTCGCCCCAATCGTCAAATTGGAGGAGGTCTCCGTCACCACCGGCGAAGAAAACGAAGACGTTATTCTCGATCTGTATGTCCTTTTCTCTCTACCAGTCCATCTCTTCTTCTCAATCTAGATTTTGAGTTTGATCGGTTATTCGTTTTCGTTGCTTTAGGAAATCCAAACTCTACCGATTTGATAAAGATGGAAACCAGTGGAAGGAGAGGGGTGCTGGCACTGTTAAGCTTTTGAAGCATAAGGAGTCTGCCAAGGTTCGCCTTGTTATGAGACAGTCCAAGACTCTCAAGATCTGCGCTAATCATCTTGGTTCGTTCTTAATTCTCTACTTGTTTATTGATTTTGATTTAGTTCTTCCTTTTTTTTAACGTTCGATTTGTTGTGGTTGTAGTTCTTCCATCAATGTCTGTTCAAGAACACTCCGGGAATGAGAAGTCGTGTGTGTGGCATGCGCCTGACTTTGCTGATGGCGAAGTCAAAGATGAGCTTTTTTGTATCAGATTCCCATCTATTGAGAGTGAGTTCAACTCCGTTGTTTCCCTTTTAAATTTTGTGTGCTTGCTGGCCGATAGATTCTTGTAGTCTGATACATATGCGCTGATCGGTGGTGGCCAGTATTAGTTTTGAAGATGCTTCTTATATACTTCTAGTTTTAGTTCTACTACGTTCATACGGTGACTTTTTTTTTCTTCCGATAAGGGTGACTCTCTGGGTGAGCTTGTGCACCTCAACTAATGTTATGAGACATATAGCCTCACCCTATAACATTTCGATGCCAAAGAATTCCTAGGAAATGAATTCTTAGGTAGATGGCCACCATGCAATAAATTCATCATCTTTACTTATTAATATTGACTCTTAAGTGTTAACTACGTTTTGAGGGAGATCTGATTGACATAAATTTATCTAGTGGTGCAGTCTAAGGATAGGTTAATGGTTCCCTGGGTATTGGGGGAGCCGGGATCCGATTCTGTTCATTAAAAAAAAAAAAAAAAGAGAGATGAATGGTTCAGAGTTAATAATTATAGTGCTTCTGTTGGTGCATACTAGATACACCGGATATGGTAGGGGCTTTCTTAAATTCCGTAGACCTCTCTGCACGAAATAAATCAAAACTGATAATGTAGCTTAGGTGGTTCATGGTTGTAATTTTATTTTTTTTAGAAAAATTAAAGAAACATATTATCATTATTTAAATGGTGTCTTGAATGAATGCCAGTTCAAAGTTATCAAGGAATTGGGTTTGCAACTCTCAATAAGATAGGAAATCCTGTATAATTTAAGGTTTCACTCTTTTCTTGTCATGGTGTGGTGAGTACTGAAGTCATTTGAAATAACTTTAACCACCTTCCCTGCCATGGCTTCATTTGATTGAACCAGAAAGGATATTGGACATGAAGCATGGAGACATGCATGTTGTTAGCTTTGAAAACTAATTAACACCCTCTGCAATTCTCTATAGGCTTCGACATGCTGCGCATTACTAGTGTAATGTTTCATTTCTTGTGGATTTAAAATGGGCAAAGATGCTGTTGGATCTTCTATTTCAGAACTTCTTAGCTAATTTTATAACCTTTTCATTTCTTTTAACTTCTTACCATTCTCTTATGTTTCCTCCAAACATTTTTGTGTCATTTAGACTAAAAGATTTTCAATTGTCTGGTTTTGGCATTTGTTTGTCATCTCTATATAATTCTCCTGATCTGTCTAGCATGACTTTGGGGGGTTAACTCCTAGTTAGATTTGTAAACACAAAACAGTTAAAATTCCTGGACTTGCATACGCATGCTTGTGTTCCATCCAACCGGTAGAGAGCTTTTAGAGAATATTTATCTTATCTTTCAAGTACTTCACTGTTTATTTTTGTTTGTCAACCTTTTTTCCCTCGGTTACAATTTATTTTTGGTATTATCAGACTGTAAGACGTTCATGGAGACATTCCAAGAAGTTGCAGAGTCTCAAAAGAAGAAAGAGGAAAATAAAGATGCATCTGCTGCAGCTGGTCTACTTGAAAAATTGAACGTTAAAGACGAAAAGAAAGCCGAGGACAAAGCCGAAGATAAATCTGAAGATAAAGCCGAGGATGCACCAGCAAAATCTAAGGAAGAGGATAATAAACCTGAGTGTGAAGCAGCAGGGAAATCAGATGTAGAGAAGAGCAGTTAGGAGCATGTTTCCCCTTCCAGATATGTCCGGTAGCTCTACCTGTAAAAGATATATCAAAACCATGAAGTTATGATGAGGTTGGCTTTGCTTCCATCCATCTTTTCGTTTGCTAAAACATAGTCAATTCTTGGATTGGATAGCATTTCTTGGGTGAGAAATTGGTCGTGGTCTATGTCGGTCGGTCGGTTGAAATCGTTTTCCATAGTTCTCCTTTTCCTTTCAAAATGAGATTGATTTGTAGTCAGTCAGTGTCAAATGGTTGGTTGTGGTGGTGGTGTCTTGTGAATTCTCAAAGTTAAGATAGCATTTCATCTGTAGAATACTATAAAGTTTGTTTGCAAGGGTTGGGTTACTAGTCAAACAAGAGTAATTGTACTTCTTTTTTAGTTGTCATGTGGTCTTTATTATTTGAGTTTTTAGATTCTAATATATTGTCAAGTGTGATTCCTTGTAGGACTGGTTTTTGCCAATTGTATTACCTGTTTACAGAGGGGTTTGTATTGTTTTTTTGGAATTGTTCACTAAAGGAAGCATTGAGGCTAGGTGTTATTATTTCTATTATTAATAGTTTTTTAGTGAGGTATATTATGTTTCTATGAGCTACTTGATACACCTTCATCAATGGTAAGACTTTTTTTTGGGAG

mRNA sequence

AAAACATTGAGTCGGTTCTCAAGGCGGGAGAGATTTTGTTCGGCTCGAACCGAACCAAGCCGACCAGTGTAGAGCATTTTGTCACTCATTTCTCCACTTCCCTTTCCTCCGAATATATATATAAACCCTACATTCTGAAGCATCCTTTTCCCAATTTCGATCCATTTCATCATCTTCGTTGTACCCAAACCCTAAATCCTCTTCCATGGCCAGCAGCGACACCGAACGCAGAGAAGACGAGGAGGCTCCAGCCGGAGAGGATGAAGACACCGGAGCTCAAGTCGCCCCAATCGTCAAATTGGAGGAGGTCTCCGTCACCACCGGCGAAGAAAACGAAGACGTTATTCTCGATCTGAAATCCAAACTCTACCGATTTGATAAAGATGGAAACCAGTGGAAGGAGAGGGGTGCTGGCACTGTTAAGCTTTTGAAGCATAAGGAGTCTGCCAAGGTTCGCCTTGTTATGAGACAGTCCAAGACTCTCAAGATCTGCGCTAATCATCTTGTTCTTCCATCAATGTCTGTTCAAGAACACTCCGGGAATGAGAAGTCGTGTGTGTGGCATGCGCCTGACTTTGCTGATGGCGAAGTCAAAGATGAGCTTTTTTGTATCAGATTCCCATCTATTGAGAACTGTAAGACGTTCATGGAGACATTCCAAGAAGTTGCAGAGTCTCAAAAGAAGAAAGAGGAAAATAAAGATGCATCTGCTGCAGCTGGTCTACTTGAAAAATTGAACGTTAAAGACGAAAAGAAAGCCGAGGACAAAGCCGAAGATAAATCTGAAGATAAAGCCGAGGATGCACCAGCAAAATCTAAGGAAGAGGATAATAAACCTGAGTGTGAAGCAGCAGGGAAATCAGATGTAGAGAAGAGCAGTTAGGAGCATGTTTCCCCTTCCAGATATGTCCGGTAGCTCTACCTGTAAAAGATATATCAAAACCATGAAGTTATGATGAGGTTGGCTTTGCTTCCATCCATCTTTTCGTTTGCTAAAACATAGTCAATTCTTGGATTGGATAGCATTTCTTGGGTGAGAAATTGGTCGTGGTCTATGTCGGTCGGTCGGTTGAAATCGTTTTCCATAGTTCTCCTTTTCCTTTCAAAATGAGATTGATTTGTAGTCAGTCAGTGTCAAATGGTTGGTTGTGGTGGTGGTGTCTTGTGAATTCTCAAAGTTAAGATAGCATTTCATCTGTAGAATACTATAAAGTTTGTTTGCAAGGGTTGGGTTACTAGTCAAACAAGAGTAATTGTACTTCTTTTTTAGTTGTCATGTGGTCTTTATTATTTGAGTTTTTAGATTCTAATATATTGTCAAGTGTGATTCCTTGTAGGACTGGTTTTTGCCAATTGTATTACCTGTTTACAGAGGGGTTTGTATTGTTTTTTTGGAATTGTTCACTAAAGGAAGCATTGAGGCTAGGTGTTATTATTTCTATTATTAATAGTTTTTTAGTGAGGTATATTATGTTTCTATGAGCTACTTGATACACCTTCATCAATGGTAAGACTTTTTTTTGGGAG

Coding sequence (CDS)

ATGGCCAGCAGCGACACCGAACGCAGAGAAGACGAGGAGGCTCCAGCCGGAGAGGATGAAGACACCGGAGCTCAAGTCGCCCCAATCGTCAAATTGGAGGAGGTCTCCGTCACCACCGGCGAAGAAAACGAAGACGTTATTCTCGATCTGAAATCCAAACTCTACCGATTTGATAAAGATGGAAACCAGTGGAAGGAGAGGGGTGCTGGCACTGTTAAGCTTTTGAAGCATAAGGAGTCTGCCAAGGTTCGCCTTGTTATGAGACAGTCCAAGACTCTCAAGATCTGCGCTAATCATCTTGTTCTTCCATCAATGTCTGTTCAAGAACACTCCGGGAATGAGAAGTCGTGTGTGTGGCATGCGCCTGACTTTGCTGATGGCGAAGTCAAAGATGAGCTTTTTTGTATCAGATTCCCATCTATTGAGAACTGTAAGACGTTCATGGAGACATTCCAAGAAGTTGCAGAGTCTCAAAAGAAGAAAGAGGAAAATAAAGATGCATCTGCTGCAGCTGGTCTACTTGAAAAATTGAACGTTAAAGACGAAAAGAAAGCCGAGGACAAAGCCGAAGATAAATCTGAAGATAAAGCCGAGGATGCACCAGCAAAATCTAAGGAAGAGGATAATAAACCTGAGTGTGAAGCAGCAGGGAAATCAGATGTAGAGAAGAGCAGTTAG

Protein sequence

MASSDTERREDEEAPAGEDEDTGAQVAPIVKLEEVSVTTGEENEDVILDLKSKLYRFDKDGNQWKERGAGTVKLLKHKESAKVRLVMRQSKTLKICANHLVLPSMSVQEHSGNEKSCVWHAPDFADGEVKDELFCIRFPSIENCKTFMETFQEVAESQKKKEENKDASAAAGLLEKLNVKDEKKAEDKAEDKSEDKAEDAPAKSKEEDNKPECEAAGKSDVEKSS

Homology

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BLAST of Sed0027496 vs. NCBI nr
Match: XP_022964941.1 (ran-binding protein 1 homolog a-like [Cucurbita moschata])

HSP 1 Score: 359.4 bits (921), Expect = 2.3e-95
Identity = 198/223 (88.79%), Postives = 207/223 (92.83%), Query Frame = 0


Query: 1   MASSDTERREDEEAPAGEDEDTGAQVAPIVKLEEVSVTTGEENEDVILDLKSKLYRFDKD 60
           MAS+DTERRE+EEAPA EDEDTGAQVAPIVKLEEV+VTTGEENED ILDLKSKLYRFDKD
Sbjct: 1   MASADTERREEEEAPAAEDEDTGAQVAPIVKLEEVAVTTGEENEDAILDLKSKLYRFDKD 60

Query: 61  GNQWKERGAGTVKLLKHKESAKVRLVMRQSKTLKICANHLVLPSMSVQEHSGNEKSCVWH 120
           GNQWKERGAGTVK LKH+E+ KVRLVMRQSKTLKICANHLVLPSMSVQEH GN+KSCVWH
Sbjct: 61  GNQWKERGAGTVKFLKHRETGKVRLVMRQSKTLKICANHLVLPSMSVQEHVGNDKSCVWH 120

Query: 121 APDFADGEVKDELFCIRFPSIENCKTFMETFQEVAESQKKKEENKDASAAAGLLEKLNVK 180
           A DFADGE+KDELFCIRFPSIENCKTFMETFQEVAESQKKKEENKDASAAAGLLEKL+V+
Sbjct: 121 ATDFADGELKDELFCIRFPSIENCKTFMETFQEVAESQKKKEENKDASAAAGLLEKLSVE 180

Query: 181 DEKKAEDKAEDKSEDKAEDAPAKSKEEDNKPECEAAGKSDVEK 224
           DEKKAE KAEDKSEDKAED P KS EE  KPE EA  KSD EK
Sbjct: 181 DEKKAE-KAEDKSEDKAEDTPVKS-EEKGKPEGEAE-KSDAEK 220

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BLAST of Sed0027496 vs. NCBI nr
Match: XP_023519267.1 (ran-binding protein 1 homolog a-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 354.8 bits (909), Expect = 5.6e-94
Identity = 195/223 (87.44%), Postives = 205/223 (91.93%), Query Frame = 0


Query: 1   MASSDTERREDEEAPAGEDEDTGAQVAPIVKLEEVSVTTGEENEDVILDLKSKLYRFDKD 60
           MAS+DTERRE+EEAPA EDEDTGAQVAPIVKLEEV+VTTGEENED ILDLKSKLYRFDKD
Sbjct: 1   MASADTERREEEEAPAAEDEDTGAQVAPIVKLEEVAVTTGEENEDAILDLKSKLYRFDKD 60

Query: 61  GNQWKERGAGTVKLLKHKESAKVRLVMRQSKTLKICANHLVLPSMSVQEHSGNEKSCVWH 120
           GNQWKERGAGTVK LKHKE+ KVRLVMRQSKTLKICANHLVLPSMSVQEH GN+KSCVWH
Sbjct: 61  GNQWKERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMSVQEHVGNDKSCVWH 120

Query: 121 APDFADGEVKDELFCIRFPSIENCKTFMETFQEVAESQKKKEENKDASAAAGLLEKLNVK 180
           A DFADGE+KDELFCIRFPSIENCKTFMETFQEVAESQKKKEENKDASAAAGLLEKL+V+
Sbjct: 121 ATDFADGELKDELFCIRFPSIENCKTFMETFQEVAESQKKKEENKDASAAAGLLEKLSVE 180

Query: 181 DEKKAEDKAEDKSEDKAEDAPAKSKEEDNKPECEAAGKSDVEK 224
           DE     KAEDKSEDKAED P KS+E+D KPE EA  KSD EK
Sbjct: 181 DE-----KAEDKSEDKAEDTPVKSEEKD-KPEGEAE-KSDAEK 216

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BLAST of Sed0027496 vs. NCBI nr
Match: XP_008457357.1 (PREDICTED: ran-binding protein 1 homolog a [Cucumis melo] >XP_011658664.2 ran-binding protein 1 homolog a [Cucumis sativus] >KAA0060033.1 ran-binding protein 1-like protein a-like [Cucumis melo var. makuwa] >KGN65824.1 hypothetical protein Csa_023197 [Cucumis sativus] >TYJ97290.1 ran-binding protein 1-like protein a-like [Cucumis melo var. makuwa])

HSP 1 Score: 354.4 bits (908), Expect = 7.4e-94
Identity = 195/223 (87.44%), Postives = 205/223 (91.93%), Query Frame = 0


Query: 1   MASSDTERREDEEAPAGEDEDTGAQVAPIVKLEEVSVTTGEENEDVILDLKSKLYRFDKD 60
           MASSDTERRE+EEAPA EDEDTGAQVAPIVKLE V+VTTGEE+ED ILDLKSKLYRFDKD
Sbjct: 1   MASSDTERREEEEAPAAEDEDTGAQVAPIVKLEAVNVTTGEEDEDAILDLKSKLYRFDKD 60

Query: 61  GNQWKERGAGTVKLLKHKESAKVRLVMRQSKTLKICANHLVLPSMSVQEHSGNEKSCVWH 120
           GNQWKERGAGTVK LKHKE+ +VRLVMRQSKTLKICANHLVLPSM+VQEH GNEKSCVWH
Sbjct: 61  GNQWKERGAGTVKFLKHKETGRVRLVMRQSKTLKICANHLVLPSMTVQEHVGNEKSCVWH 120

Query: 121 APDFADGEVKDELFCIRFPSIENCKTFMETFQEVAESQKKKEENKDASAAAGLLEKLNVK 180
           A DFADGE+KDELFCIRFPSI+NCKTFMETFQEVAESQKKK ENKDASAAAGLLEKL+V+
Sbjct: 121 ATDFADGELKDELFCIRFPSIDNCKTFMETFQEVAESQKKKVENKDASAAAGLLEKLSVE 180

Query: 181 DEKKAEDKAEDKSEDKAEDAPAKSKEEDNKPECEAAGKSDVEK 224
           DEK    KAEDKSEDKAED P KSKEED KPE E AGKSD EK
Sbjct: 181 DEK----KAEDKSEDKAEDTPVKSKEED-KPEGE-AGKSDAEK 217

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BLAST of Sed0027496 vs. NCBI nr
Match: XP_022150930.1 (ran-binding protein 1 homolog b-like [Momordica charantia])

HSP 1 Score: 353.6 bits (906), Expect = 1.3e-93
Identity = 195/224 (87.05%), Postives = 205/224 (91.52%), Query Frame = 0


Query: 1   MASSDTERREDEEAPAGEDEDTGAQVAPIVKLEEVSVTTGEENEDVILDLKSKLYRFDKD 60
           MAS+DTERRE+EEAP GEDEDTGAQVAPIVKLE V+VTTGEE+ED ILDLKSKLYRFDKD
Sbjct: 1   MASTDTERREEEEAPVGEDEDTGAQVAPIVKLEAVAVTTGEEDEDAILDLKSKLYRFDKD 60

Query: 61  GNQWKERGAGTVKLLKHKESAKVRLVMRQSKTLKICANHLVLPSMSVQEHSGNEKSCVWH 120
           GNQWKERGAGTVK LKHKES KVRLVMRQSKTLKICANHLVL SMSVQEH+GNEKSCVWH
Sbjct: 61  GNQWKERGAGTVKFLKHKESGKVRLVMRQSKTLKICANHLVLSSMSVQEHAGNEKSCVWH 120

Query: 121 APDFADGEVKDELFCIRFPSIENCKTFMETFQEVAESQKKKEENKDASAAAGLLEKLNVK 180
           A DFADGE+KDELFCIRFPSIENCKTFMETFQEVAESQ KKEENKDASAAAGLLEKL+V+
Sbjct: 121 ATDFADGELKDELFCIRFPSIENCKTFMETFQEVAESQMKKEENKDASAAAGLLEKLSVE 180

Query: 181 DEKKAEDKAEDKSEDKAEDAPAKSKEEDNKPECEAAGKSDVEKS 225
           +EK    KAEDKSEDK+ED PAKSKEED  PE E  GKSD EKS
Sbjct: 181 EEK----KAEDKSEDKSEDTPAKSKEEDT-PEGE-PGKSDAEKS 218

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BLAST of Sed0027496 vs. NCBI nr
Match: KAG6583353.1 (Ran-binding protein 1-like c, partial [Cucurbita argyrosperma subsp. sororia] >KAG7019122.1 Ran-binding protein 1-like c [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 352.8 bits (904), Expect = 2.1e-93
Identity = 194/223 (87.00%), Postives = 205/223 (91.93%), Query Frame = 0


Query: 1   MASSDTERREDEEAPAGEDEDTGAQVAPIVKLEEVSVTTGEENEDVILDLKSKLYRFDKD 60
           MAS+DTERRE+EEAPA EDEDTGAQVAPIVKLEEV+VTTGEENED ILDLKSKLYRFDKD
Sbjct: 1   MASADTERREEEEAPAAEDEDTGAQVAPIVKLEEVAVTTGEENEDAILDLKSKLYRFDKD 60

Query: 61  GNQWKERGAGTVKLLKHKESAKVRLVMRQSKTLKICANHLVLPSMSVQEHSGNEKSCVWH 120
           GNQWKERGAGTVK LKHKE+ KVRLVMRQSKTLKICANHLVLPSMSVQEH GN+KSCVWH
Sbjct: 61  GNQWKERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMSVQEHVGNDKSCVWH 120

Query: 121 APDFADGEVKDELFCIRFPSIENCKTFMETFQEVAESQKKKEENKDASAAAGLLEKLNVK 180
           A DFADGE+KDELFCIRFPSIENCKTFMETFQEVAESQKKKEENKDASAAAGLLEKL+V+
Sbjct: 121 ATDFADGELKDELFCIRFPSIENCKTFMETFQEVAESQKKKEENKDASAAAGLLEKLSVE 180

Query: 181 DEKKAEDKAEDKSEDKAEDAPAKSKEEDNKPECEAAGKSDVEK 224
           DEKKAE     K+EDKAED P KS+E+D KPE EA  KSD EK
Sbjct: 181 DEKKAE-----KAEDKAEDPPVKSEEKD-KPEGEAE-KSDAEK 216

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BLAST of Sed0027496 vs. ExPASy Swiss-Prot
Match: Q9LMK7 (Ran-binding protein 1 homolog a OS=Arabidopsis thaliana OX=3702 GN=RANBP1A PE=1 SV=1)

HSP 1 Score: 276.6 bits (706), Expect = 2.6e-73
Identity = 150/218 (68.81%), Postives = 175/218 (80.28%), Query Frame = 0


Query: 7   ERREDEEAPAGEDEDTGAQVAPIVKLEEVSVTTGEENEDVILDLKSKLYRFDKDGNQWKE 66
           E R++EEA A EDEDTGAQVAPIV+LEEV+VTTGEE+ED +LDLKSKLYRFDKD NQWKE
Sbjct: 9   EHRDEEEAGANEDEDTGAQVAPIVRLEEVAVTTGEEDEDAVLDLKSKLYRFDKDANQWKE 68

Query: 67  RGAGTVKLLKHKESAKVRLVMRQSKTLKICANHLVLPSMSVQEHSGNEKSCVWHAPDFAD 126
           RGAGTVK LKHK + K+RLVMRQSKTLKICANH V   MSVQEH GNEKSCVWHA DFAD
Sbjct: 69  RGAGTVKFLKHKNTGKIRLVMRQSKTLKICANHFVKSGMSVQEHVGNEKSCVWHARDFAD 128

Query: 127 GEVKDELFCIRFPSIENCKTFMETFQEVAESQKKKEENKDASAAAGLLEKLNVKDEKKAE 186
           GE+KDELFCIRF SIENCKTFM+ F+EVAES+++KEE+KDA+  AGLLEKL V+     E
Sbjct: 129 GELKDELFCIRFASIENCKTFMQKFKEVAESEEEKEESKDAADTAGLLEKLTVE-----E 188

Query: 187 DKAEDKSEDKAEDAPAKSKEEDNKPECEAAGKSDVEKS 225
            K E+K+E KA +      + + K E EA    + +K+
Sbjct: 189 TKTEEKTEAKAVETAKTEVKAEEKKESEAEKSGEAKKT 221

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BLAST of Sed0027496 vs. ExPASy Swiss-Prot
Match: Q8RWG8 (Ran-binding protein 1 homolog b OS=Arabidopsis thaliana OX=3702 GN=RANBP1B PE=1 SV=2)

HSP 1 Score: 273.9 bits (699), Expect = 1.7e-72
Identity = 143/207 (69.08%), Postives = 173/207 (83.57%), Query Frame = 0


Query: 5   DTERREDEEAPAGEDEDTGAQVAPIVKLEEVSVTTGEENEDVILDLKSKLYRFDKDGNQW 64
           + E R++EE  A EDEDTGAQVAPIV+LEEV+VTTGEE+ED ILDLKSKLYRFDKDG+QW
Sbjct: 9   ERENRDEEETGANEDEDTGAQVAPIVRLEEVAVTTGEEDEDTILDLKSKLYRFDKDGSQW 68

Query: 65  KERGAGTVKLLKHKESAKVRLVMRQSKTLKICANHLVLPSMSVQEHSGNEKSCVWHAPDF 124
           KERGAGTVK LKH+ S K+RLVMRQSKTLKICANHLV   MSVQEH+GN+KSCVWHA DF
Sbjct: 69  KERGAGTVKFLKHRVSGKIRLVMRQSKTLKICANHLVGSGMSVQEHAGNDKSCVWHARDF 128

Query: 125 ADGEVKDELFCIRFPSIENCKTFMETFQEVAESQKKKEENKDASAAAGLLEKLNVKDEKK 184
           +DGE+KDELFCIRF S+ENCK FM+ F+EVAES+++KEE+KDAS  AGLLEKL V++++ 
Sbjct: 129 SDGELKDELFCIRFASVENCKAFMQKFKEVAESEEEKEESKDASDTAGLLEKLTVEEKES 188

Query: 185 AEDKAEDKSEDKAEDAPAKSKEEDNKP 212
            +   E   E+K  +A  + K E++ P
Sbjct: 189 EKKPVEKAEENKKSEAVEEKKTEESVP 215

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BLAST of Sed0027496 vs. ExPASy Swiss-Prot
Match: P92985 (Ran-binding protein 1 homolog c OS=Arabidopsis thaliana OX=3702 GN=RANBP1C PE=2 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 1.2e-70
Identity = 145/221 (65.61%), Postives = 177/221 (80.09%), Query Frame = 0


Query: 1   MASSDTER-REDEEAPAGEDEDTGAQVAPIVKLEEVSVTTGEENEDVILDLKSKLYRFDK 60
           MAS++ ER   ++E    EDEDTGAQVAPIV+LEEV+VTTGEE+ED +LDLKSK+YRFDK
Sbjct: 1   MASTEPERENREDETEVNEDEDTGAQVAPIVRLEEVAVTTGEEDEDAVLDLKSKMYRFDK 60

Query: 61  DGNQWKERGAGTVKLLKHKESAKVRLVMRQSKTLKICANHLVLPSMSVQEHSGNEKSCVW 120
           +GNQWKERGAGTVKLLKHKE+ KVRLVMRQSKTLKICANHL+   MSVQEHSGNEKSC+W
Sbjct: 61  EGNQWKERGAGTVKLLKHKETGKVRLVMRQSKTLKICANHLISSGMSVQEHSGNEKSCLW 120

Query: 121 HAPDFADGEVKDELFCIRFPSIENCKTFMETFQEVAESQKKKEENKDASAAAGLLEKLNV 180
           HA DF+DGE+KDELFCIRF SIENCKTFME F E+AESQ+  +E+     AAGL+E L+V
Sbjct: 121 HATDFSDGELKDELFCIRFASIENCKTFMEKFTEIAESQQVGKESTQGDEAAGLIENLSV 180

Query: 181 KDEKKAEDKAEDKSEDKAEDAPAKSKEEDNKPECEAAGKSD 221
           +     E+ +E+K+++  E  PAK  +E  K + E   K++
Sbjct: 181 E-----ENISEEKAKEAEEKEPAKEDKETKKEKVEEEKKTE 216

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BLAST of Sed0027496 vs. ExPASy Swiss-Prot
Match: Q09717 (Ran-specific GTPase-activating protein 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=sbp1 PE=1 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 5.4e-31
Identity = 73/156 (46.79%), Postives = 96/156 (61.54%), Query Frame = 0


Query: 11  DEEAPAGEDEDT-----GAQVAPIVKLEEVSVTTGEENEDVILDLKSKLYRFDKDGNQWK 70
           DE+ PA  DED           PIVKL  V   T EE E V   +++KL+RFDK  ++WK
Sbjct: 55  DEKKPAEGDEDAEPASPEVHFEPIVKLSAVETKTNEEEETVEFKMRAKLFRFDKAASEWK 114

Query: 71  ERGAGTVKLLKHKESAKVRLVMRQSKTLKICANHLVLPSMSVQEHSGNEKSCVWH-APDF 130
           ERG G  +LLKHKE+ K RLVMR+ KTLK+CANHL++P M +  + G+++S VW  A D 
Sbjct: 115 ERGTGDARLLKHKETGKTRLVMRRDKTLKVCANHLLMPEMKLTPNVGSDRSWVWTVAADV 174

Query: 131 ADGEVKDELFCIRFPSIENCKTFMETFQEVAESQKK 161
           ++GE   E F IRF + EN   F E F++  E   K
Sbjct: 175 SEGEPTAETFAIRFANSENANLFKENFEKYQEENAK 210

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BLAST of Sed0027496 vs. ExPASy Swiss-Prot
Match: P34022 (Ran-specific GTPase-activating protein OS=Mus musculus OX=10090 GN=Ranbp1 PE=1 SV=2)

HSP 1 Score: 126.7 bits (317), Expect = 3.3e-28
Identity = 80/201 (39.80%), Postives = 122/201 (60.70%), Query Frame = 0


Query: 2   ASSDTERREDEEAPAGEDEDTGAQVAPIVKLEEVSVTTGEENEDVILDLKSKLYRF--DK 61
           A+ D+    D      ++ +   Q  PIV L E  + T EE+E+ +  +++KL+RF  + 
Sbjct: 3   AAKDSHEDHDTSTENADESNHDPQFEPIVSLPEQEIKTLEEDEEELFKMRAKLFRFASEN 62

Query: 62  DGNQWKERGAGTVKLLKHKESAKVRLVMRQSKTLKICANHLVLPSMSVQEHSGNEKSCVW 121
           D  +WKERG G VKLLKHKE   +RL+MR+ KTLKICANH + P M ++ ++G++++ VW
Sbjct: 63  DLPEWKERGTGDVKLLKHKEKGTIRLLMRRDKTLKICANHYITPMMELKPNAGSDRAWVW 122

Query: 122 HA-PDFADGEVKDELFCIRFPSIENCKTFMETFQEV---AESQKKKEENKDASAAAGLLE 181
           +   DFAD   K EL  IRF + EN + F   F+E     E ++KK   K+ +A   + E
Sbjct: 123 NTHADFADECPKPELLAIRFLNAENAQKFKTKFEECRKEIEEREKKGPGKNDNAEK-VAE 182

Query: 182 KLNVKDEKKAEDKAEDKSEDK 197
           KL     ++A ++AE+KSE+K
Sbjct: 183 KLEALSVREAREEAEEKSEEK 202

[Close]

BLAST of Sed0027496 vs. ExPASy TrEMBL
Match: A0A6J1HKC3 (ran-binding protein 1 homolog a-like OS=Cucurbita moschata OX=3662 GN=LOC111464892 PE=4 SV=1)

HSP 1 Score: 359.4 bits (921), Expect = 1.1e-95
Identity = 198/223 (88.79%), Postives = 207/223 (92.83%), Query Frame = 0


Query: 1   MASSDTERREDEEAPAGEDEDTGAQVAPIVKLEEVSVTTGEENEDVILDLKSKLYRFDKD 60
           MAS+DTERRE+EEAPA EDEDTGAQVAPIVKLEEV+VTTGEENED ILDLKSKLYRFDKD
Sbjct: 1   MASADTERREEEEAPAAEDEDTGAQVAPIVKLEEVAVTTGEENEDAILDLKSKLYRFDKD 60

Query: 61  GNQWKERGAGTVKLLKHKESAKVRLVMRQSKTLKICANHLVLPSMSVQEHSGNEKSCVWH 120
           GNQWKERGAGTVK LKH+E+ KVRLVMRQSKTLKICANHLVLPSMSVQEH GN+KSCVWH
Sbjct: 61  GNQWKERGAGTVKFLKHRETGKVRLVMRQSKTLKICANHLVLPSMSVQEHVGNDKSCVWH 120

Query: 121 APDFADGEVKDELFCIRFPSIENCKTFMETFQEVAESQKKKEENKDASAAAGLLEKLNVK 180
           A DFADGE+KDELFCIRFPSIENCKTFMETFQEVAESQKKKEENKDASAAAGLLEKL+V+
Sbjct: 121 ATDFADGELKDELFCIRFPSIENCKTFMETFQEVAESQKKKEENKDASAAAGLLEKLSVE 180

Query: 181 DEKKAEDKAEDKSEDKAEDAPAKSKEEDNKPECEAAGKSDVEK 224
           DEKKAE KAEDKSEDKAED P KS EE  KPE EA  KSD EK
Sbjct: 181 DEKKAE-KAEDKSEDKAEDTPVKS-EEKGKPEGEAE-KSDAEK 220

[Close]

BLAST of Sed0027496 vs. ExPASy TrEMBL
Match: A0A5A7UVN5 (Ran-binding protein 1-like protein a-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G00850 PE=4 SV=1)

HSP 1 Score: 354.4 bits (908), Expect = 3.6e-94
Identity = 195/223 (87.44%), Postives = 205/223 (91.93%), Query Frame = 0


Query: 1   MASSDTERREDEEAPAGEDEDTGAQVAPIVKLEEVSVTTGEENEDVILDLKSKLYRFDKD 60
           MASSDTERRE+EEAPA EDEDTGAQVAPIVKLE V+VTTGEE+ED ILDLKSKLYRFDKD
Sbjct: 1   MASSDTERREEEEAPAAEDEDTGAQVAPIVKLEAVNVTTGEEDEDAILDLKSKLYRFDKD 60

Query: 61  GNQWKERGAGTVKLLKHKESAKVRLVMRQSKTLKICANHLVLPSMSVQEHSGNEKSCVWH 120
           GNQWKERGAGTVK LKHKE+ +VRLVMRQSKTLKICANHLVLPSM+VQEH GNEKSCVWH
Sbjct: 61  GNQWKERGAGTVKFLKHKETGRVRLVMRQSKTLKICANHLVLPSMTVQEHVGNEKSCVWH 120

Query: 121 APDFADGEVKDELFCIRFPSIENCKTFMETFQEVAESQKKKEENKDASAAAGLLEKLNVK 180
           A DFADGE+KDELFCIRFPSI+NCKTFMETFQEVAESQKKK ENKDASAAAGLLEKL+V+
Sbjct: 121 ATDFADGELKDELFCIRFPSIDNCKTFMETFQEVAESQKKKVENKDASAAAGLLEKLSVE 180

Query: 181 DEKKAEDKAEDKSEDKAEDAPAKSKEEDNKPECEAAGKSDVEK 224
           DEK    KAEDKSEDKAED P KSKEED KPE E AGKSD EK
Sbjct: 181 DEK----KAEDKSEDKAEDTPVKSKEED-KPEGE-AGKSDAEK 217

[Close]

BLAST of Sed0027496 vs. ExPASy TrEMBL
Match: A0A0A0LXN6 (RanBD1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G532320 PE=4 SV=1)

HSP 1 Score: 354.4 bits (908), Expect = 3.6e-94
Identity = 195/223 (87.44%), Postives = 205/223 (91.93%), Query Frame = 0


Query: 1   MASSDTERREDEEAPAGEDEDTGAQVAPIVKLEEVSVTTGEENEDVILDLKSKLYRFDKD 60
           MASSDTERRE+EEAPA EDEDTGAQVAPIVKLE V+VTTGEE+ED ILDLKSKLYRFDKD
Sbjct: 1   MASSDTERREEEEAPAAEDEDTGAQVAPIVKLEAVNVTTGEEDEDAILDLKSKLYRFDKD 60

Query: 61  GNQWKERGAGTVKLLKHKESAKVRLVMRQSKTLKICANHLVLPSMSVQEHSGNEKSCVWH 120
           GNQWKERGAGTVK LKHKE+ +VRLVMRQSKTLKICANHLVLPSM+VQEH GNEKSCVWH
Sbjct: 61  GNQWKERGAGTVKFLKHKETGRVRLVMRQSKTLKICANHLVLPSMTVQEHVGNEKSCVWH 120

Query: 121 APDFADGEVKDELFCIRFPSIENCKTFMETFQEVAESQKKKEENKDASAAAGLLEKLNVK 180
           A DFADGE+KDELFCIRFPSI+NCKTFMETFQEVAESQKKK ENKDASAAAGLLEKL+V+
Sbjct: 121 ATDFADGELKDELFCIRFPSIDNCKTFMETFQEVAESQKKKVENKDASAAAGLLEKLSVE 180

Query: 181 DEKKAEDKAEDKSEDKAEDAPAKSKEEDNKPECEAAGKSDVEK 224
           DEK    KAEDKSEDKAED P KSKEED KPE E AGKSD EK
Sbjct: 181 DEK----KAEDKSEDKAEDTPVKSKEED-KPEGE-AGKSDAEK 217

[Close]

BLAST of Sed0027496 vs. ExPASy TrEMBL
Match: A0A1S3C5A9 (ran-binding protein 1 homolog a OS=Cucumis melo OX=3656 GN=LOC103497065 PE=4 SV=1)

HSP 1 Score: 354.4 bits (908), Expect = 3.6e-94
Identity = 195/223 (87.44%), Postives = 205/223 (91.93%), Query Frame = 0


Query: 1   MASSDTERREDEEAPAGEDEDTGAQVAPIVKLEEVSVTTGEENEDVILDLKSKLYRFDKD 60
           MASSDTERRE+EEAPA EDEDTGAQVAPIVKLE V+VTTGEE+ED ILDLKSKLYRFDKD
Sbjct: 1   MASSDTERREEEEAPAAEDEDTGAQVAPIVKLEAVNVTTGEEDEDAILDLKSKLYRFDKD 60

Query: 61  GNQWKERGAGTVKLLKHKESAKVRLVMRQSKTLKICANHLVLPSMSVQEHSGNEKSCVWH 120
           GNQWKERGAGTVK LKHKE+ +VRLVMRQSKTLKICANHLVLPSM+VQEH GNEKSCVWH
Sbjct: 61  GNQWKERGAGTVKFLKHKETGRVRLVMRQSKTLKICANHLVLPSMTVQEHVGNEKSCVWH 120

Query: 121 APDFADGEVKDELFCIRFPSIENCKTFMETFQEVAESQKKKEENKDASAAAGLLEKLNVK 180
           A DFADGE+KDELFCIRFPSI+NCKTFMETFQEVAESQKKK ENKDASAAAGLLEKL+V+
Sbjct: 121 ATDFADGELKDELFCIRFPSIDNCKTFMETFQEVAESQKKKVENKDASAAAGLLEKLSVE 180

Query: 181 DEKKAEDKAEDKSEDKAEDAPAKSKEEDNKPECEAAGKSDVEK 224
           DEK    KAEDKSEDKAED P KSKEED KPE E AGKSD EK
Sbjct: 181 DEK----KAEDKSEDKAEDTPVKSKEED-KPEGE-AGKSDAEK 217

[Close]

BLAST of Sed0027496 vs. ExPASy TrEMBL
Match: A0A6J1D9U4 (ran-binding protein 1 homolog b-like OS=Momordica charantia OX=3673 GN=LOC111018963 PE=4 SV=1)

HSP 1 Score: 353.6 bits (906), Expect = 6.1e-94
Identity = 195/224 (87.05%), Postives = 205/224 (91.52%), Query Frame = 0


Query: 1   MASSDTERREDEEAPAGEDEDTGAQVAPIVKLEEVSVTTGEENEDVILDLKSKLYRFDKD 60
           MAS+DTERRE+EEAP GEDEDTGAQVAPIVKLE V+VTTGEE+ED ILDLKSKLYRFDKD
Sbjct: 1   MASTDTERREEEEAPVGEDEDTGAQVAPIVKLEAVAVTTGEEDEDAILDLKSKLYRFDKD 60

Query: 61  GNQWKERGAGTVKLLKHKESAKVRLVMRQSKTLKICANHLVLPSMSVQEHSGNEKSCVWH 120
           GNQWKERGAGTVK LKHKES KVRLVMRQSKTLKICANHLVL SMSVQEH+GNEKSCVWH
Sbjct: 61  GNQWKERGAGTVKFLKHKESGKVRLVMRQSKTLKICANHLVLSSMSVQEHAGNEKSCVWH 120

Query: 121 APDFADGEVKDELFCIRFPSIENCKTFMETFQEVAESQKKKEENKDASAAAGLLEKLNVK 180
           A DFADGE+KDELFCIRFPSIENCKTFMETFQEVAESQ KKEENKDASAAAGLLEKL+V+
Sbjct: 121 ATDFADGELKDELFCIRFPSIENCKTFMETFQEVAESQMKKEENKDASAAAGLLEKLSVE 180

Query: 181 DEKKAEDKAEDKSEDKAEDAPAKSKEEDNKPECEAAGKSDVEKS 225
           +EK    KAEDKSEDK+ED PAKSKEED  PE E  GKSD EKS
Sbjct: 181 EEK----KAEDKSEDKSEDTPAKSKEEDT-PEGE-PGKSDAEKS 218

[Close]

BLAST of Sed0027496 vs. TAIR 10
Match: AT1G07140.1 (Pleckstrin homology (PH) domain superfamily protein )

HSP 1 Score: 276.6 bits (706), Expect = 1.8e-74
Identity = 150/218 (68.81%), Postives = 175/218 (80.28%), Query Frame = 0


Query: 7   ERREDEEAPAGEDEDTGAQVAPIVKLEEVSVTTGEENEDVILDLKSKLYRFDKDGNQWKE 66
           E R++EEA A EDEDTGAQVAPIV+LEEV+VTTGEE+ED +LDLKSKLYRFDKD NQWKE
Sbjct: 9   EHRDEEEAGANEDEDTGAQVAPIVRLEEVAVTTGEEDEDAVLDLKSKLYRFDKDANQWKE 68

Query: 67  RGAGTVKLLKHKESAKVRLVMRQSKTLKICANHLVLPSMSVQEHSGNEKSCVWHAPDFAD 126
           RGAGTVK LKHK + K+RLVMRQSKTLKICANH V   MSVQEH GNEKSCVWHA DFAD
Sbjct: 69  RGAGTVKFLKHKNTGKIRLVMRQSKTLKICANHFVKSGMSVQEHVGNEKSCVWHARDFAD 128

Query: 127 GEVKDELFCIRFPSIENCKTFMETFQEVAESQKKKEENKDASAAAGLLEKLNVKDEKKAE 186
           GE+KDELFCIRF SIENCKTFM+ F+EVAES+++KEE+KDA+  AGLLEKL V+     E
Sbjct: 129 GELKDELFCIRFASIENCKTFMQKFKEVAESEEEKEESKDAADTAGLLEKLTVE-----E 188

Query: 187 DKAEDKSEDKAEDAPAKSKEEDNKPECEAAGKSDVEKS 225
            K E+K+E KA +      + + K E EA    + +K+
Sbjct: 189 TKTEEKTEAKAVETAKTEVKAEEKKESEAEKSGEAKKT 221

[Close]

BLAST of Sed0027496 vs. TAIR 10
Match: AT2G30060.1 (Pleckstrin homology (PH) domain superfamily protein )

HSP 1 Score: 273.9 bits (699), Expect = 1.2e-73
Identity = 143/207 (69.08%), Postives = 173/207 (83.57%), Query Frame = 0


Query: 5   DTERREDEEAPAGEDEDTGAQVAPIVKLEEVSVTTGEENEDVILDLKSKLYRFDKDGNQW 64
           + E R++EE  A EDEDTGAQVAPIV+LEEV+VTTGEE+ED ILDLKSKLYRFDKDG+QW
Sbjct: 9   ERENRDEEETGANEDEDTGAQVAPIVRLEEVAVTTGEEDEDTILDLKSKLYRFDKDGSQW 68

Query: 65  KERGAGTVKLLKHKESAKVRLVMRQSKTLKICANHLVLPSMSVQEHSGNEKSCVWHAPDF 124
           KERGAGTVK LKH+ S K+RLVMRQSKTLKICANHLV   MSVQEH+GN+KSCVWHA DF
Sbjct: 69  KERGAGTVKFLKHRVSGKIRLVMRQSKTLKICANHLVGSGMSVQEHAGNDKSCVWHARDF 128

Query: 125 ADGEVKDELFCIRFPSIENCKTFMETFQEVAESQKKKEENKDASAAAGLLEKLNVKDEKK 184
           +DGE+KDELFCIRF S+ENCK FM+ F+EVAES+++KEE+KDAS  AGLLEKL V++++ 
Sbjct: 129 SDGELKDELFCIRFASVENCKAFMQKFKEVAESEEEKEESKDASDTAGLLEKLTVEEKES 188

Query: 185 AEDKAEDKSEDKAEDAPAKSKEEDNKP 212
            +   E   E+K  +A  + K E++ P
Sbjct: 189 EKKPVEKAEENKKSEAVEEKKTEESVP 215

[Close]

BLAST of Sed0027496 vs. TAIR 10
Match: AT5G58590.1 (RAN binding protein 1 )

HSP 1 Score: 267.7 bits (683), Expect = 8.5e-72
Identity = 145/221 (65.61%), Postives = 177/221 (80.09%), Query Frame = 0


Query: 1   MASSDTER-REDEEAPAGEDEDTGAQVAPIVKLEEVSVTTGEENEDVILDLKSKLYRFDK 60
           MAS++ ER   ++E    EDEDTGAQVAPIV+LEEV+VTTGEE+ED +LDLKSK+YRFDK
Sbjct: 1   MASTEPERENREDETEVNEDEDTGAQVAPIVRLEEVAVTTGEEDEDAVLDLKSKMYRFDK 60

Query: 61  DGNQWKERGAGTVKLLKHKESAKVRLVMRQSKTLKICANHLVLPSMSVQEHSGNEKSCVW 120
           +GNQWKERGAGTVKLLKHKE+ KVRLVMRQSKTLKICANHL+   MSVQEHSGNEKSC+W
Sbjct: 61  EGNQWKERGAGTVKLLKHKETGKVRLVMRQSKTLKICANHLISSGMSVQEHSGNEKSCLW 120

Query: 121 HAPDFADGEVKDELFCIRFPSIENCKTFMETFQEVAESQKKKEENKDASAAAGLLEKLNV 180
           HA DF+DGE+KDELFCIRF SIENCKTFME F E+AESQ+  +E+     AAGL+E L+V
Sbjct: 121 HATDFSDGELKDELFCIRFASIENCKTFMEKFTEIAESQQVGKESTQGDEAAGLIENLSV 180

Query: 181 KDEKKAEDKAEDKSEDKAEDAPAKSKEEDNKPECEAAGKSD 221
           +     E+ +E+K+++  E  PAK  +E  K + E   K++
Sbjct: 181 E-----ENISEEKAKEAEEKEPAKEDKETKKEKVEEEKKTE 216

[Close]

BLAST of Sed0027496 vs. TAIR 10
Match: AT3G15970.1 (NUP50 (Nucleoporin 50 kDa) protein )

HSP 1 Score: 51.6 bits (122), Expect = 9.5e-07
Identity = 43/141 (30.50%), Postives = 66/141 (46.81%), Query Frame = 0


Query: 33  EEVSVTTGEENEDVILDLKSKLYRFDKDGNQWKERGAGTVKL-LKHKESAKVRLVMRQSK 92
           ++VSV TGEENE       S ++ + + G  WKERG G +K+ +   E+ K RLVMR   
Sbjct: 320 QDVSVETGEENEKAAFTADSVMFEYLEGG--WKERGKGELKVNISTTENRKARLVMRSKG 379

Query: 93  TLKICANHLVLPSMSV--QEHSGNEKSCVWHAPDFADGEVKDELFCIRFPSIENCKTFME 152
             ++  N  + P M +   +  G   +CV    D  DG        ++F       T +E
Sbjct: 380 NYRLTLNASLYPEMKLAKMDKKGITFACVNSVSDAKDGL---STLALKFKD----PTVVE 439

Query: 153 TFQEVAESQKKKEENKDASAA 171
            F+ V E  K  + +   +AA
Sbjct: 440 EFRAVIEEHKDSKPSVAEAAA 451

The following BLAST results are available for this feature:

BLAST of Sed0027496 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022964941.1	2.3e-95	88.79	ran-binding protein 1 homolog a-like [Cucurbita moschata]	[more]
XP_023519267.1	5.6e-94	87.44	ran-binding protein 1 homolog a-like [Cucurbita pepo subsp. pepo]	[more]
XP_008457357.1	7.4e-94	87.44	PREDICTED: ran-binding protein 1 homolog a [Cucumis melo] >XP_011658664.2 ran-bi...	[more]
XP_022150930.1	1.3e-93	87.05	ran-binding protein 1 homolog b-like [Momordica charantia]	[more]
KAG6583353.1	2.1e-93	87.00	Ran-binding protein 1-like c, partial [Cucurbita argyrosperma subsp. sororia] >K...	[more]

BLAST of Sed0027496 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LMK7	2.6e-73	68.81	Ran-binding protein 1 homolog a OS=Arabidopsis thaliana OX=3702 GN=RANBP1A PE=1 ...	[more]
Q8RWG8	1.7e-72	69.08	Ran-binding protein 1 homolog b OS=Arabidopsis thaliana OX=3702 GN=RANBP1B PE=1 ...	[more]
P92985	1.2e-70	65.61	Ran-binding protein 1 homolog c OS=Arabidopsis thaliana OX=3702 GN=RANBP1C PE=2 ...	[more]
Q09717	5.4e-31	46.79	Ran-specific GTPase-activating protein 1 OS=Schizosaccharomyces pombe (strain 97...	[more]
P34022	3.3e-28	39.80	Ran-specific GTPase-activating protein OS=Mus musculus OX=10090 GN=Ranbp1 PE=1 S...	[more]

BLAST of Sed0027496 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HKC3	1.1e-95	88.79	ran-binding protein 1 homolog a-like OS=Cucurbita moschata OX=3662 GN=LOC1114648...	[more]
A0A5A7UVN5	3.6e-94	87.44	Ran-binding protein 1-like protein a-like OS=Cucumis melo var. makuwa OX=1194695...	[more]
A0A0A0LXN6	3.6e-94	87.44	RanBD1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G532320 PE=4...	[more]
A0A1S3C5A9	3.6e-94	87.44	ran-binding protein 1 homolog a OS=Cucumis melo OX=3656 GN=LOC103497065 PE=4 SV=...	[more]
A0A6J1D9U4	6.1e-94	87.05	ran-binding protein 1 homolog b-like OS=Momordica charantia OX=3673 GN=LOC111018...	[more]

BLAST of Sed0027496 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G07140.1	1.8e-74	68.81	Pleckstrin homology (PH) domain superfamily protein	[more]
AT2G30060.1	1.2e-73	69.08	Pleckstrin homology (PH) domain superfamily protein	[more]
AT5G58590.1	8.5e-72	65.61	RAN binding protein 1	[more]
AT3G15970.1	9.5e-07	30.50	NUP50 (Nucleoporin 50 kDa) protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000156	Ran binding domain	SMART	SM00160	ranbd_3	coord: 26..154 e-value: 1.2E-41 score: 154.4
IPR000156	Ran binding domain	PFAM	PF00638	Ran_BP1	coord: 37..154 e-value: 1.6E-39 score: 135.0
IPR000156	Ran binding domain	PROSITE	PS50196	RANBD1	coord: 25..160 score: 34.825981
IPR011993	PH-like domain superfamily	GENE3D	2.30.29.30		coord: 9..173 e-value: 9.1E-55 score: 186.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 157..225
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..29
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 176..225
None	No IPR available	PANTHER	PTHR23138	RAN BINDING PROTEIN	coord: 6..210
None	No IPR available	PANTHER	PTHR23138:SF156	RAN-BINDING PROTEIN 1 HOMOLOG C-LIKE	coord: 6..210
None	No IPR available	CDD	cd13179	RanBD_RanBP1	coord: 23..156 e-value: 1.29015E-65 score: 197.406
None	No IPR available	SUPERFAMILY	50729	PH domain-like	coord: 24..162

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0027496.1	Sed0027496.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0046907	intracellular transport