Homology
BLAST of Sed0027468 vs. NCBI nr
Match:
XP_022135004.1 (pentatricopeptide repeat-containing protein At4g30825, chloroplastic isoform X1 [Momordica charantia] >XP_022135005.1 pentatricopeptide repeat-containing protein At4g30825, chloroplastic isoform X2 [Momordica charantia] >XP_022135006.1 pentatricopeptide repeat-containing protein At4g30825, chloroplastic isoform X3 [Momordica charantia])
HSP 1 Score: 1548.1 bits (4007), Expect = 0.0e+00
Identity = 766/904 (84.73%), Postives = 827/904 (91.48%), Query Frame = 0
Query: 1 MASLKFSFSLHSFDSNKFNFPVKSSLLSDCCSVFSITGYIHLNQSCILYSLARVHKPCWV 60
MASLK SF L SFDS KF+FPVKS+LLSD CSVFSITGYIHLN+SCILYSLARVHKP V
Sbjct: 1 MASLKISFPLDSFDSKKFDFPVKSALLSDICSVFSITGYIHLNKSCILYSLARVHKPSKV 60
Query: 61 SQV----------RCVVDEIDTRKKCVGSKKSSKRRSGSGSGSNFSFSGNCSEKVFENVV 120
SQV + V DEI RKK VG+KK SKR GS FSFS NCSEKVF+N++
Sbjct: 61 SQVEPEASDIYQSKFVDDEIGARKKYVGNKKPSKR----APGSYFSFSRNCSEKVFDNII 120
Query: 121 FNGGELDVDYSTISSDLSLDDCNAILKRLEKCNDSKTLVFFEWMRRNGKLEHNVTAYNMV 180
FNGGE+DV+YSTISSDLSL+DCNAIL++LEKCND KTLVFFEWMRRNGKLEHNVTAYN+V
Sbjct: 121 FNGGEMDVNYSTISSDLSLEDCNAILRKLEKCNDGKTLVFFEWMRRNGKLEHNVTAYNLV 180
Query: 181 LRVLGRREDWDAAEKLVAEVRPDLGSQFDYQIFNTLIYACYKLGLVERGAKWFRMMLECR 240
LRVLGR+EDWDAAEKL+ +VR DLGSQ D+QIFNTLIYACYK GLV+RGAKWFRMMLECR
Sbjct: 181 LRVLGRQEDWDAAEKLIRQVRADLGSQLDFQIFNTLIYACYKSGLVDRGAKWFRMMLECR 240
Query: 241 VQPNVATFGMLMGLYQKGRDTKESEFAFNQMRNLGVVCETAYSSMITIYLRTSLYGKAED 300
VQPNVATFGMLMGL QKG + +E+EFAF+QMR+ G+VCE Y+SMITIY R SLY KAE+
Sbjct: 241 VQPNVATFGMLMGLCQKGCNVEEAEFAFSQMRSFGIVCEAMYASMITIYARLSLYDKAEE 300
Query: 301 VIRFMQEDKVTPNLENWLVMLNTYCQQGKMEDAEVVFASMENAGFSSNIIAYNTLITGYG 360
VI+ MQEDKVTPNLENWLVMLNTYCQQGK+EDAE+VFASME AGFSSNIIAYNTLITGYG
Sbjct: 301 VIQLMQEDKVTPNLENWLVMLNTYCQQGKLEDAELVFASMEEAGFSSNIIAYNTLITGYG 360
Query: 361 KASNMDAAQRLFLGIKNSGVEPDETTYRSMIEGWGRAGNYKMAEWYYKELTRKGYTPNAS 420
K SNMDAA+RLFLGIKNSG EPDETTYRSMIEGWGRAGNY+MAEWYYKEL RKGY PN S
Sbjct: 361 KVSNMDAAERLFLGIKNSGAEPDETTYRSMIEGWGRAGNYEMAEWYYKELKRKGYMPNTS 420
Query: 421 NLFTLINLQAKHEDEAGALKTVNDMLKIGCRLSAVVGNVLQAYEKARRIQIVPLLLTGPF 480
NLFTLINLQAKHEDEAGAL+T++DMLKIGCR S++VGNVLQAYEKARRI+ VPLLLTG F
Sbjct: 421 NLFTLINLQAKHEDEAGALETLDDMLKIGCRPSSIVGNVLQAYEKARRIKSVPLLLTGSF 480
Query: 481 YRKVLKSQTSCSILAMTYVKHCLVDGALKLLREKEWNDQHFEENLYHLLICSCKDLGHLD 540
Y KVL SQTSCSIL M Y+KHCLVD ALK+LREKEWND +FEENLYHLLICSCK+LG L+
Sbjct: 481 YCKVLSSQTSCSILVMAYMKHCLVDDALKILREKEWNDHNFEENLYHLLICSCKELGQLE 540
Query: 541 NAIKIYNQLPKRENNPNLHITCTMIDIYSIMGRFSEGEKLYLSLRSSGIPLDLIAFSVVV 600
NAIKIY QLPKREN PNLHITCTMIDIYSIMG+FSEGEKLYLSLRSS IPLDLIAF+VVV
Sbjct: 541 NAIKIYTQLPKRENKPNLHITCTMIDIYSIMGKFSEGEKLYLSLRSSDIPLDLIAFNVVV 600
Query: 601 RMYVKAGSLEDACSVIDLMDERQDIVPDIYLLRDMLRIYQRCGMVNKLADLYYRILKRGV 660
RMYVKAGSLEDAC V+DLMD++QDIVPD+YLLRDMLRIYQRCGMV+KLADLYYRILK GV
Sbjct: 601 RMYVKAGSLEDACLVLDLMDQQQDIVPDVYLLRDMLRIYQRCGMVDKLADLYYRILKSGV 660
Query: 661 SWDQEMYNCVINCCSRALPVDELSRIFDEMLHHGFAPNTVTLNVMLDVYGKSKLFTKARN 720
SWDQEMYNCVINCCSRALPVDELSR+FDEMLH GFAPNTVTLNVMLDVYGKSKLFTKARN
Sbjct: 661 SWDQEMYNCVINCCSRALPVDELSRLFDEMLHRGFAPNTVTLNVMLDVYGKSKLFTKARN 720
Query: 721 LFGLAQKRGWVDAISYNTMISAYGKNKYFKNMSSTVKKMTYNGFSVSLEAYNCMLDAYGK 780
LFGLAQKRG VD ISYNTMISAYGKNK FKNMSSTV+KM +NGFSVSLEAYNCMLDAYGK
Sbjct: 721 LFGLAQKRGLVDVISYNTMISAYGKNKDFKNMSSTVQKMKFNGFSVSLEAYNCMLDAYGK 780
Query: 781 ECQMENFRSVLQEMKDSSSERDHFTYNIMINIYGEQGWINEVSEVLTELKACGLEPDLYS 840
ECQME+FRSVLQ MK+S +ERD +TYNIMINIYGEQGWI+EV+EVLTEL+ CGLEPDLYS
Sbjct: 781 ECQMESFRSVLQRMKESCAERDRYTYNIMINIYGEQGWIDEVAEVLTELRECGLEPDLYS 840
Query: 841 YNTLIKAYGIAGMVEEAVLLVKEMREKGIEPDRITYINMVKALQRNDQFLEAIKWSLWMK 895
YNTLIKAYGIAGMVEEAVLLVKEMREK IEPDRITYINM+KALQRNDQFLEAIKWSLWMK
Sbjct: 841 YNTLIKAYGIAGMVEEAVLLVKEMREKRIEPDRITYINMIKALQRNDQFLEAIKWSLWMK 900
BLAST of Sed0027468 vs. NCBI nr
Match:
XP_038879369.1 (pentatricopeptide repeat-containing protein At4g30825, chloroplastic [Benincasa hispida] >XP_038879370.1 pentatricopeptide repeat-containing protein At4g30825, chloroplastic [Benincasa hispida])
HSP 1 Score: 1536.5 bits (3977), Expect = 0.0e+00
Identity = 765/904 (84.62%), Postives = 818/904 (90.49%), Query Frame = 0
Query: 1 MASLKFSFSLHSFDSNKFNFPVKSSLLSDCCSVFSITGYIHLNQSCILYSLARVHKPCWV 60
MASLKFSFSLHSFDS K +FPV S+LLSDCCSVFSITGYIHLN SLARVHKP V
Sbjct: 1 MASLKFSFSLHSFDSKKLDFPVNSALLSDCCSVFSITGYIHLNN-----SLARVHKPSKV 60
Query: 61 SQV----------RCVVDEIDTRKKCVGSKKSSKRRSGSGSGSNFSFSGNCSEKVFENVV 120
SQV + DEID RKK G KK SKR SGS FSFS N SEKVFEN++
Sbjct: 61 SQVEPEASDVSQSKFSADEIDARKKYFGGKKPSKR----ASGSYFSFSRNSSEKVFENII 120
Query: 121 FNGGELDVDYSTISSDLSLDDCNAILKRLEKCNDSKTLVFFEWMRRNGKLEHNVTAYNMV 180
FNGGELDV+YSTISSDLSL+DCNAILKRLEKCNDSKTL FFEWMR NGKLE NV+AYN+V
Sbjct: 121 FNGGELDVNYSTISSDLSLEDCNAILKRLEKCNDSKTLGFFEWMRSNGKLEQNVSAYNLV 180
Query: 181 LRVLGRREDWDAAEKLVAEVRPDLGSQFDYQIFNTLIYACYKLGLVERGAKWFRMMLECR 240
LRVLGR+EDWDAAEKL+ EVR +LGSQ D+Q+FNTLIYACYKLGLVERG KWFRMMLEC+
Sbjct: 181 LRVLGRQEDWDAAEKLIREVRAELGSQLDFQVFNTLIYACYKLGLVERGTKWFRMMLECQ 240
Query: 241 VQPNVATFGMLMGLYQKGRDTKESEFAFNQMRNLGVVCETAYSSMITIYLRTSLYGKAED 300
V PNVATFGMLMGLYQKG D KESEF+FNQMRN G+VCETAY+SMITIY R ++Y KAED
Sbjct: 241 VHPNVATFGMLMGLYQKGCDIKESEFSFNQMRNFGIVCETAYASMITIYTRMNMYDKAED 300
Query: 301 VIRFMQEDKVTPNLENWLVMLNTYCQQGKMEDAEVVFASMENAGFSSNIIAYNTLITGYG 360
VI+ MQEDKV PNLENWLVMLN YCQQGKME+AE+VFASM+ AGFSSNIIAYNTLITGYG
Sbjct: 301 VIQLMQEDKVIPNLENWLVMLNAYCQQGKMEEAELVFASMKEAGFSSNIIAYNTLITGYG 360
Query: 361 KASNMDAAQRLFLGIKNSGVEPDETTYRSMIEGWGRAGNYKMAEWYYKELTRKGYTPNAS 420
KASNMDAAQRLFLGIKNS VEPDETTYRSMIEGWGRAG+Y+MAEWYYKEL RKGY PNAS
Sbjct: 361 KASNMDAAQRLFLGIKNSAVEPDETTYRSMIEGWGRAGSYEMAEWYYKELKRKGYMPNAS 420
Query: 421 NLFTLINLQAKHEDEAGALKTVNDMLKIGCRLSAVVGNVLQAYEKARRIQIVPLLLTGPF 480
NLFTLI+LQAKHEDE GALKT+NDMLKIGCR S++VGN++QAYEKARRI+ VP LLTG F
Sbjct: 421 NLFTLISLQAKHEDEGGALKTLNDMLKIGCRPSSIVGNLVQAYEKARRIKSVPSLLTGSF 480
Query: 481 YRKVLKSQTSCSILAMTYVKHCLVDGALKLLREKEWNDQHFEENLYHLLICSCKDLGHLD 540
YRK+L SQTSCSILAM YVKHCLVD ALK+LREKEW D HFEENLYHLLICSCK+LGHL+
Sbjct: 481 YRKILSSQTSCSILAMAYVKHCLVDDALKVLREKEWKDHHFEENLYHLLICSCKELGHLE 540
Query: 541 NAIKIYNQLPKRENNPNLHITCTMIDIYSIMGRFSEGEKLYLSLRSSGIPLDLIAFSVVV 600
NAIKIY QLPK EN PNLHITCTMIDIYSIMGRFS+GEKLYLSLRSSGIPLDLIAF+VVV
Sbjct: 541 NAIKIYTQLPKHENKPNLHITCTMIDIYSIMGRFSDGEKLYLSLRSSGIPLDLIAFNVVV 600
Query: 601 RMYVKAGSLEDACSVIDLMDERQDIVPDIYLLRDMLRIYQRCGMVNKLADLYYRILKRGV 660
RMYVKAG LEDACSV+DLMDE+QDIVPDIYL RDMLRIYQRCGMV+KLADLYYRILK GV
Sbjct: 601 RMYVKAGLLEDACSVLDLMDEQQDIVPDIYLFRDMLRIYQRCGMVHKLADLYYRILKSGV 660
Query: 661 SWDQEMYNCVINCCSRALPVDELSRIFDEMLHHGFAPNTVTLNVMLDVYGKSKLFTKARN 720
SWDQEMYNCVINCCSRALPVDELSR+FDEML GFAPNTVTLNVMLDVYGKSKLFTKARN
Sbjct: 661 SWDQEMYNCVINCCSRALPVDELSRLFDEMLQCGFAPNTVTLNVMLDVYGKSKLFTKARN 720
Query: 721 LFGLAQKRGWVDAISYNTMISAYGKNKYFKNMSSTVKKMTYNGFSVSLEAYNCMLDAYGK 780
LF LAQKRG VD ISYNTMISAYGKNK FKNMSSTV KM +NGFSVSLEAYNCMLDAYGK
Sbjct: 721 LFRLAQKRGLVDVISYNTMISAYGKNKDFKNMSSTVHKMKFNGFSVSLEAYNCMLDAYGK 780
Query: 781 ECQMENFRSVLQEMKDSSSERDHFTYNIMINIYGEQGWINEVSEVLTELKACGLEPDLYS 840
ECQMENFRSVLQ+M++SSSERD +TYNIMINIYGE+GWI+EV+EVLTELKACGLEPDLYS
Sbjct: 781 ECQMENFRSVLQQMQESSSERDRYTYNIMINIYGERGWIDEVAEVLTELKACGLEPDLYS 840
Query: 841 YNTLIKAYGIAGMVEEAVLLVKEMREKGIEPDRITYINMVKALQRNDQFLEAIKWSLWMK 895
YNTLIKAYGIAGMVEEA LVKEMREK IEPDRITYINM++ALQRNDQFLEAIKWSLWMK
Sbjct: 841 YNTLIKAYGIAGMVEEAAWLVKEMREKRIEPDRITYINMIRALQRNDQFLEAIKWSLWMK 895
BLAST of Sed0027468 vs. NCBI nr
Match:
XP_016899838.1 (PREDICTED: pentatricopeptide repeat-containing protein At4g30825, chloroplastic [Cucumis melo] >KAA0035106.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYJ95972.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])
HSP 1 Score: 1535.8 bits (3975), Expect = 0.0e+00
Identity = 758/902 (84.04%), Postives = 823/902 (91.24%), Query Frame = 0
Query: 1 MASLKFSFSLHSFDSNKFNFPVKSSLLSDCCSVFSITGYIHLNQSCILYSLARVHKPCWV 60
MASLK SFSLHSFDSNKF+FPV S LSD CS+FSI GYIHLN+SCILYSLARVHKP V
Sbjct: 1 MASLKLSFSLHSFDSNKFDFPVNSPPLSDYCSLFSINGYIHLNKSCILYSLARVHKPSKV 60
Query: 61 SQV--------RCVVDEIDTRKKCVGSKKSSKRRSGSGSGSNFSFSGNCSEKVFENVVFN 120
SQV + D+ID+RKK +KK SKR +GS+FSFS NCSEK+FEN++F+
Sbjct: 61 SQVEPEASDVSQSRFDDIDSRKKYFTAKKPSKR----AAGSHFSFSRNCSEKIFENILFS 120
Query: 121 GGELDVDYSTISSDLSLDDCNAILKRLEKCNDSKTLVFFEWMRRNGKLEHNVTAYNMVLR 180
GGELDV+YSTISSDLSL+ CNAILKRLEKCNDSKTL FFEWMR NGKL+HNV+AYN+VLR
Sbjct: 121 GGELDVNYSTISSDLSLEGCNAILKRLEKCNDSKTLDFFEWMRSNGKLKHNVSAYNLVLR 180
Query: 181 VLGRREDWDAAEKLVAEVRPDLGSQFDYQIFNTLIYACYKLGLVERGAKWFRMMLECRVQ 240
VLGR+EDWDAAEKL+ EVR +LGSQ D+Q+FNTLIYACYK G VE G KWFRMMLEC+VQ
Sbjct: 181 VLGRQEDWDAAEKLIKEVRAELGSQLDFQVFNTLIYACYKSGFVEWGTKWFRMMLECQVQ 240
Query: 241 PNVATFGMLMGLYQKGRDTKESEFAFNQMRNLGVVCETAYSSMITIYLRTSLYGKAEDVI 300
PNVATFGMLMGLYQK D +ESEFAFNQMRN G+VCETAY+SMITIY+R +LY KAE+VI
Sbjct: 241 PNVATFGMLMGLYQKSCDIEESEFAFNQMRNFGIVCETAYASMITIYIRMNLYDKAEEVI 300
Query: 301 RFMQEDKVTPNLENWLVMLNTYCQQGKMEDAEVVFASMENAGFSSNIIAYNTLITGYGKA 360
+ MQ+DKV PNLENWLVMLN YCQQGKME+AE+VFASME AGFSSNIIAYNTLITGYGKA
Sbjct: 301 QLMQKDKVIPNLENWLVMLNAYCQQGKMEEAELVFASMEEAGFSSNIIAYNTLITGYGKA 360
Query: 361 SNMDAAQRLFLGIKNSGVEPDETTYRSMIEGWGRAGNYKMAEWYYKELTRKGYTPNASNL 420
SNMD AQRLFLGIKNSGVEPDETTYRSMIEGWGRAGNYKMAEWYYKEL RKGY PN+SNL
Sbjct: 361 SNMDTAQRLFLGIKNSGVEPDETTYRSMIEGWGRAGNYKMAEWYYKELKRKGYMPNSSNL 420
Query: 421 FTLINLQAKHEDEAGALKTVNDMLKIGCRLSAVVGNVLQAYEKARRIQIVPLLLTGPFYR 480
FTLINLQAKHEDEAGALKT+NDMLKIGCR S++VGNVLQAYEKARRI+ VP+LLTG FYR
Sbjct: 421 FTLINLQAKHEDEAGALKTLNDMLKIGCRPSSIVGNVLQAYEKARRIKSVPVLLTGSFYR 480
Query: 481 KVLKSQTSCSILAMTYVKHCLVDGALKLLREKEWNDQHFEENLYHLLICSCKDLGHLDNA 540
KVL SQTSCSIL M YVKHCLVD ALK+LREKEW D HFEENLYHLLICSCK+LGH ++A
Sbjct: 481 KVLSSQTSCSILVMAYVKHCLVDDALKVLREKEWKDHHFEENLYHLLICSCKELGHFESA 540
Query: 541 IKIYNQLPKRENNPNLHITCTMIDIYSIMGRFSEGEKLYLSLRSSGIPLDLIAFSVVVRM 600
IKIY Q PKREN PNLHITCTMIDIYSIMGRFS+GEKLYLSLRSSGIPLDLIA++VVVRM
Sbjct: 541 IKIYAQRPKRENKPNLHITCTMIDIYSIMGRFSDGEKLYLSLRSSGIPLDLIAYNVVVRM 600
Query: 601 YVKAGSLEDACSVIDLMDERQDIVPDIYLLRDMLRIYQRCGMVNKLADLYYRILKRGVSW 660
YVKAGSLEDACSV+DLM E+QDIVPD+YLLRDMLRIYQRCGMV+KL+DLYYRILK GVSW
Sbjct: 601 YVKAGSLEDACSVLDLMAEQQDIVPDVYLLRDMLRIYQRCGMVHKLSDLYYRILKSGVSW 660
Query: 661 DQEMYNCVINCCSRALPVDELSRIFDEMLHHGFAPNTVTLNVMLDVYGKSKLFTKARNLF 720
DQEMYNCVINCCSRALPVDELSR+FDEML GFAPNTVTLNVMLDVYGKSKLF KARNLF
Sbjct: 661 DQEMYNCVINCCSRALPVDELSRLFDEMLQCGFAPNTVTLNVMLDVYGKSKLFAKARNLF 720
Query: 721 GLAQKRGWVDAISYNTMISAYGKNKYFKNMSSTVKKMTYNGFSVSLEAYNCMLDAYGKEC 780
G AQKRG VDAISYNTMIS YGKNK FKNMSSTV++M +NGFSVSLEAYNCMLDAYGKEC
Sbjct: 721 GFAQKRGLVDAISYNTMISVYGKNKDFKNMSSTVQQMKFNGFSVSLEAYNCMLDAYGKEC 780
Query: 781 QMENFRSVLQEMKDSSSERDHFTYNIMINIYGEQGWINEVSEVLTELKACGLEPDLYSYN 840
QMENFRSVLQ M++S+SE DH+TYNIMINIYGE+GWI+EV+EVLTELKACGLEPDLYSYN
Sbjct: 781 QMENFRSVLQRMQESTSECDHYTYNIMINIYGERGWIDEVAEVLTELKACGLEPDLYSYN 840
Query: 841 TLIKAYGIAGMVEEAVLLVKEMREKGIEPDRITYINMVKALQRNDQFLEAIKWSLWMKQM 895
TLIKAYGIAGMVEEA LVKEMREKGIEPDRITYINM++ALQRNDQFLEAIKWSLWMKQM
Sbjct: 841 TLIKAYGIAGMVEEAARLVKEMREKGIEPDRITYINMIRALQRNDQFLEAIKWSLWMKQM 898
BLAST of Sed0027468 vs. NCBI nr
Match:
XP_004146719.1 (pentatricopeptide repeat-containing protein At4g30825, chloroplastic [Cucumis sativus] >XP_011655645.1 pentatricopeptide repeat-containing protein At4g30825, chloroplastic [Cucumis sativus] >KGN65183.1 hypothetical protein Csa_020004 [Cucumis sativus])
HSP 1 Score: 1521.9 bits (3939), Expect = 0.0e+00
Identity = 755/902 (83.70%), Postives = 819/902 (90.80%), Query Frame = 0
Query: 1 MASLKFSFSLHSFDSNKFNFPVKSSLLSDCCSVFSITGYIHLNQSCILYSLARVHKPCWV 60
MASLK SFSLHSFDSNKF+FP+ S LLSD CS+FSI ++HLN+S I+YSLARVHKP V
Sbjct: 1 MASLKLSFSLHSFDSNKFDFPLNSPLLSDYCSLFSINAHLHLNKSSIIYSLARVHKPSKV 60
Query: 61 SQV--------RCVVDEIDTRKKCVGSKKSSKRRSGSGSGSNFSFSGNCSEKVFENVVFN 120
SQV + DEI RKK SKK SKR +GS+FSFS NC+ +N++FN
Sbjct: 61 SQVEQDASDVSQSRFDEIVARKKYFTSKKPSKR----AAGSHFSFSRNCN----DNILFN 120
Query: 121 GGELDVDYSTISSDLSLDDCNAILKRLEKCNDSKTLVFFEWMRRNGKLEHNVTAYNMVLR 180
GGELDV+YSTISSDLSL+DCNAILKRLEKCNDSKTL FFEWMR NGKL+HNV+AYN+VLR
Sbjct: 121 GGELDVNYSTISSDLSLEDCNAILKRLEKCNDSKTLGFFEWMRSNGKLKHNVSAYNLVLR 180
Query: 181 VLGRREDWDAAEKLVAEVRPDLGSQFDYQIFNTLIYACYKLGLVERGAKWFRMMLECRVQ 240
VLGR+EDWDAAEKL+ EVR +LGSQ D+Q+FNTLIYACYK VE+G KWFRMMLEC+VQ
Sbjct: 181 VLGRQEDWDAAEKLIEEVRAELGSQLDFQVFNTLIYACYKSRFVEQGTKWFRMMLECQVQ 240
Query: 241 PNVATFGMLMGLYQKGRDTKESEFAFNQMRNLGVVCETAYSSMITIYLRTSLYGKAEDVI 300
PNVATFGMLMGLYQK D KESEFAFNQMRN G+VCETAY+SMITIY+R +LY KAE+VI
Sbjct: 241 PNVATFGMLMGLYQKKCDIKESEFAFNQMRNFGIVCETAYASMITIYIRMNLYDKAEEVI 300
Query: 301 RFMQEDKVTPNLENWLVMLNTYCQQGKMEDAEVVFASMENAGFSSNIIAYNTLITGYGKA 360
+ MQEDKV PNLENW+VMLN YCQQGKME+AE+VFASME AGFSSNIIAYNTLITGYGKA
Sbjct: 301 QLMQEDKVIPNLENWVVMLNAYCQQGKMEEAELVFASMEEAGFSSNIIAYNTLITGYGKA 360
Query: 361 SNMDAAQRLFLGIKNSGVEPDETTYRSMIEGWGRAGNYKMAEWYYKELTRKGYTPNASNL 420
SNMD AQRLFLGIKNSGVEPDETTYRSMIEGWGRAGNYKMAEWYYKEL R+GY PN+SNL
Sbjct: 361 SNMDTAQRLFLGIKNSGVEPDETTYRSMIEGWGRAGNYKMAEWYYKELKRRGYMPNSSNL 420
Query: 421 FTLINLQAKHEDEAGALKTVNDMLKIGCRLSAVVGNVLQAYEKARRIQIVPLLLTGPFYR 480
FTLINLQAKHEDEAG LKT+NDMLKIGCR S++VGNVLQAYEKARR++ VP+LLTG FYR
Sbjct: 421 FTLINLQAKHEDEAGTLKTLNDMLKIGCRPSSIVGNVLQAYEKARRMKSVPVLLTGSFYR 480
Query: 481 KVLKSQTSCSILAMTYVKHCLVDGALKLLREKEWNDQHFEENLYHLLICSCKDLGHLDNA 540
KVL SQTSCSIL M YVKHCLVD ALK+LREKEW D HFEENLYHLLICSCK+LGHL+NA
Sbjct: 481 KVLSSQTSCSILVMAYVKHCLVDDALKVLREKEWKDHHFEENLYHLLICSCKELGHLENA 540
Query: 541 IKIYNQLPKRENNPNLHITCTMIDIYSIMGRFSEGEKLYLSLRSSGIPLDLIAFSVVVRM 600
IKIY QLPKREN PNLHITCTMIDIYSIMGRFS+GEKLYLSLRSSGIPLDLIA++VVVRM
Sbjct: 541 IKIYTQLPKRENKPNLHITCTMIDIYSIMGRFSDGEKLYLSLRSSGIPLDLIAYNVVVRM 600
Query: 601 YVKAGSLEDACSVIDLMDERQDIVPDIYLLRDMLRIYQRCGMVNKLADLYYRILKRGVSW 660
YVKAGSLEDACSV+DLM E+QDIVPDIYLLRDMLRIYQRCGMV+KLADLYYRILK GVSW
Sbjct: 601 YVKAGSLEDACSVLDLMAEQQDIVPDIYLLRDMLRIYQRCGMVHKLADLYYRILKSGVSW 660
Query: 661 DQEMYNCVINCCSRALPVDELSRIFDEMLHHGFAPNTVTLNVMLDVYGKSKLFTKARNLF 720
DQEMYNCVINCCSRALPVDELSR+FDEML GFAPNTVTLNVMLDVYGKSKLFTKARNLF
Sbjct: 661 DQEMYNCVINCCSRALPVDELSRLFDEMLQCGFAPNTVTLNVMLDVYGKSKLFTKARNLF 720
Query: 721 GLAQKRGWVDAISYNTMISAYGKNKYFKNMSSTVKKMTYNGFSVSLEAYNCMLDAYGKEC 780
GLAQKRG VDAISYNTMIS YGKNK FKNMSSTV+KM +NGFSVSLEAYNCMLDAYGKEC
Sbjct: 721 GLAQKRGLVDAISYNTMISVYGKNKDFKNMSSTVQKMKFNGFSVSLEAYNCMLDAYGKEC 780
Query: 781 QMENFRSVLQEMKDSSSERDHFTYNIMINIYGEQGWINEVSEVLTELKACGLEPDLYSYN 840
QMENFRSVLQ M+++SSE DH+TYNIMINIYGEQGWI+EV+EVLTELKACGLEPDLYSYN
Sbjct: 781 QMENFRSVLQRMQETSSECDHYTYNIMINIYGEQGWIDEVAEVLTELKACGLEPDLYSYN 840
Query: 841 TLIKAYGIAGMVEEAVLLVKEMREKGIEPDRITYINMVKALQRNDQFLEAIKWSLWMKQM 895
TLIKAYGIAGMVEEA LVKEMREK IEPDRITYINM++ALQRNDQFLEA+KWSLWMKQM
Sbjct: 841 TLIKAYGIAGMVEEAAQLVKEMREKRIEPDRITYINMIRALQRNDQFLEAVKWSLWMKQM 894
BLAST of Sed0027468 vs. NCBI nr
Match:
XP_023516176.1 (pentatricopeptide repeat-containing protein At4g30825, chloroplastic [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1460.7 bits (3780), Expect = 0.0e+00
Identity = 724/901 (80.36%), Postives = 798/901 (88.57%), Query Frame = 0
Query: 1 MASLKFSFSLHSFDSNKFNFPVKSSLLSDCCSVFSITGYIHLNQSCILYSLARVHKPCWV 60
MASLK SFSL SF S KF+FPV SSLLSDCCSVFSITGYIHLN+SC+LYSL R HKP V
Sbjct: 1 MASLKLSFSLDSFHSKKFDFPVNSSLLSDCCSVFSITGYIHLNKSCVLYSLVRAHKPSKV 60
Query: 61 S-------QVRCVVDEIDTRKKCVGSKKSSKRRSGSGSGSNFSFSGNCSEKVFENVVFNG 120
+ +C VDEIDTRKK G KK SKR GS FSFS NCSEKVF+++VF+G
Sbjct: 61 EPETSGGYESKCAVDEIDTRKKYFGGKKPSKR----APGSYFSFSKNCSEKVFDSIVFHG 120
Query: 121 GELDVDYSTISSDLSLDDCNAILKRLEKCNDSKTLVFFEWMRRNGKLEHNVTAYNMVLRV 180
GELDV+YSTISSDLSL+DCNAILKRLEKCND K L FFEWMR N KLEHNV+AYN++LRV
Sbjct: 121 GELDVNYSTISSDLSLEDCNAILKRLEKCNDRKALGFFEWMRINRKLEHNVSAYNLILRV 180
Query: 181 LGRREDWDAAEKLVAEVRPDLGSQFDYQIFNTLIYACYKLGLVERGAKWFRMMLECRVQP 240
LGR++DWDAA+KL+ EVR +L Q D+Q+FNTLIYACYK GLVE+GAKWF+MMLE +V P
Sbjct: 181 LGRQQDWDAADKLIREVRAELSDQLDFQVFNTLIYACYKSGLVEQGAKWFQMMLEWQVLP 240
Query: 241 NVATFGMLMGLYQKGRDTKESEFAFNQMRNLGVVCETAYSSMITIYLRTSLYGKAEDVIR 300
NVATFGMLMGLYQK + KE+EFAFNQMRN G+VCETAY+SMITIY R SLY KAE+VIR
Sbjct: 241 NVATFGMLMGLYQKSCNLKEAEFAFNQMRNFGIVCETAYASMITIYTRLSLYDKAEEVIR 300
Query: 301 FMQEDKVTPNLENWLVMLNTYCQQGKMEDAEVVFASMENAGFSSNIIAYNTLITGYGKAS 360
MQEDKV PN+ENWLVMLN YCQQGKMEDAE+VFASME GFSSNIIAYNTLITGYGKAS
Sbjct: 301 LMQEDKVIPNVENWLVMLNAYCQQGKMEDAELVFASMEEHGFSSNIIAYNTLITGYGKAS 360
Query: 361 NMDAAQRLFLGIKNSGVEPDETTYRSMIEGWGRAGNYKMAEWYYKELTRKGYTPNASNLF 420
NMDAAQRLFL IKNSGVEPDETTYRSMIEGWGRAGNYKMAEWY+KEL RKGY PNASNLF
Sbjct: 361 NMDAAQRLFLSIKNSGVEPDETTYRSMIEGWGRAGNYKMAEWYFKELKRKGYMPNASNLF 420
Query: 421 TLINLQAKHEDEAGALKTVNDMLKIGCRLSAVVGNVLQAYEKARRIQIVPLLLTGPFYRK 480
TL+NLQAKHED+AGALKT+NDMLKIGCRLS++VGNVLQAYEKARRI+ VPLLLTG FYRK
Sbjct: 421 TLMNLQAKHEDDAGALKTLNDMLKIGCRLSSIVGNVLQAYEKARRIKSVPLLLTGSFYRK 480
Query: 481 VLKSQTSCSILAMTYVKHCLVDGALKLLREKEWNDQHFEENLYHLLICSCKDLGHLDNAI 540
VL SQTSCSIL M YVKH LVD ALK+LREKEWND FEENLYHLLICSCK+L HL+NAI
Sbjct: 481 VLASQTSCSILVMAYVKHGLVDDALKVLREKEWNDLRFEENLYHLLICSCKELDHLENAI 540
Query: 541 KIYNQLPKRENNPNLHITCTMIDIYSIMGRFSEGEKLYLSLRSSGIPLDLIAFSVVVRMY 600
KIY QLPKR+N PNLHIT TMIDIYSIMGRFS+GEKLYLSL+SSGI LDLIAFSVVVRMY
Sbjct: 541 KIYTQLPKRKNKPNLHITSTMIDIYSIMGRFSDGEKLYLSLKSSGIRLDLIAFSVVVRMY 600
Query: 601 VKAGSLEDACSVIDLMDERQDIVPDIYLLRDMLRIYQRCGMVNKLADLYYRILKRGVSWD 660
VKAGSLEDACSV+D MD++QDIVPDIYL RDMLRIYQRCGMV+KL D+YYRIL VSWD
Sbjct: 601 VKAGSLEDACSVLDFMDKQQDIVPDIYLFRDMLRIYQRCGMVDKLQDVYYRILNSDVSWD 660
Query: 661 QEMYNCVINCCSRALPVDELSRIFDEMLHHGFAPNTVTLNVMLDVYGKSKLFTKARNLFG 720
QEMYNCVINCCSRAL VDELS +FDEML GFAPNTVTLNVMLDVYGKSKLF+KAR L
Sbjct: 661 QEMYNCVINCCSRALLVDELSSLFDEMLQRGFAPNTVTLNVMLDVYGKSKLFSKARKLLL 720
Query: 721 LAQKRGWVDAISYNTMISAYGKNKYFKNMSSTVKKMTYNGFSVSLEAYNCMLDAYGKECQ 780
LAQK+G VD ISYNTMISA+GK+K F NMSSTV+ M +NGFS+SLEAYN +LDAYGKE +
Sbjct: 721 LAQKKGLVDVISYNTMISAFGKSKDFANMSSTVRTMEFNGFSLSLEAYNSLLDAYGKEGR 780
Query: 781 MENFRSVLQEMKDSSSERDHFTYNIMINIYGEQGWINEVSEVLTELKACGLEPDLYSYNT 840
M+NFR VLQ++KDS+SERD +TYNIMINIYG+QGWI++V EVLTELKACGLEPDLYSYN
Sbjct: 781 MDNFRQVLQQLKDSNSERDQYTYNIMINIYGKQGWIDDVEEVLTELKACGLEPDLYSYNA 840
Query: 841 LIKAYGIAGMVEEAVLLVKEMREKGIEPDRITYINMVKALQRNDQFLEAIKWSLWMKQMK 895
LIKAYGIAGMVEEA LVKEMREK IEPD++T+++M+ ALQRNDQ+LEAIKWSLWMKQM
Sbjct: 841 LIKAYGIAGMVEEAAQLVKEMREKRIEPDKVTFLSMITALQRNDQYLEAIKWSLWMKQMN 897
BLAST of Sed0027468 vs. ExPASy Swiss-Prot
Match:
O65567 (Pentatricopeptide repeat-containing protein At4g30825, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At4g30825 PE=2 SV=2)
HSP 1 Score: 1060.8 bits (2742), Expect = 8.3e-309
Identity = 540/902 (59.87%), Postives = 665/902 (73.73%), Query Frame = 0
Query: 1 MASLKFSFSLHSFDS--NKFNFPVKSSLLSDCCSVFSITGYIHLNQSCILYSLARVHKPC 60
M SL+FS L FDS +F+F S D + +T IH ++ + S RV
Sbjct: 1 MGSLRFSIPLDPFDSKRKRFHFSANPSQFPDQFPIHFVTSSIHATRASSIGSSTRVLDKI 60
Query: 61 WVSQVRCVVDE--IDTRKKCVGSKKSSKRRSGSGSGS------NFSFSGNCSEKVFENVV 120
VS + +E I++ + S + SG G+ FSF ++ EN+
Sbjct: 61 RVSSLGTEANENAINSASAAPVERSRSSKLSGDQRGTKKYVARKFSFRRGSNDLELENLF 120
Query: 121 FNGGELDVDYSTISSDLSLDDCNAILKRLEKCNDSKTLVFFEWMRRNGKLEHNVTAYNMV 180
N GE+DV+YS I SL+ CN ILKRLE C+D+ + FF+WMR NGKL N AY+++
Sbjct: 121 VNNGEIDVNYSAIKPGQSLEHCNGILKRLESCSDTNAIKFFDWMRCNGKLVGNFVAYSLI 180
Query: 181 LRVLGRREDWDAAEKLVAEVRPDLGSQFDYQIFNTLIYACYKLGLVERGAKWFRMMLECR 240
LRVLGRRE+WD AE L+ E+ Q YQ+FNT+IYAC K G V+ +KWF MMLE
Sbjct: 181 LRVLGRREEWDRAEDLIKELCGFHEFQKSYQVFNTVIYACTKKGNVKLASKWFHMMLEFG 240
Query: 241 VQPNVATFGMLMGLYQKGRDTKESEFAFNQMRNLGVVCETAYSSMITIYLRTSLYGKAED 300
V+PNVAT GMLMGLYQK + +E+EFAF+ MR G+VCE+AYSSMITIY R LY KAE+
Sbjct: 241 VRPNVATIGMLMGLYQKNWNVEEAEFAFSHMRKFGIVCESAYSSMITIYTRLRLYDKAEE 300
Query: 301 VIRFMQEDKVTPNLENWLVMLNTYCQQGKMEDAEVVFASMENAGFSSNIIAYNTLITGYG 360
VI M++D+V LENWLVMLN Y QQGKME AE + SME AGFS NIIAYNTLITGYG
Sbjct: 301 VIDLMKQDRVRLKLENWLVMLNAYSQQGKMELAESILVSMEAAGFSPNIIAYNTLITGYG 360
Query: 361 KASNMDAAQRLFLGIKNSGVEPDETTYRSMIEGWGRAGNYKMAEWYYKELTRKGYTPNAS 420
K M+AAQ LF + N G+EPDET+YRSMIEGWGRA NY+ A+ YY+EL R GY PN+
Sbjct: 361 KIFKMEAAQGLFHRLCNIGLEPDETSYRSMIEGWGRADNYEEAKHYYQELKRCGYKPNSF 420
Query: 421 NLFTLINLQAKHEDEAGALKTVNDMLKIGCRLSAVVGNVLQAYEKARRIQIVPLLLTGPF 480
NLFTLINLQAK+ D GA+KT+ DM IGC+ S+++G +LQAYEK +I +VP +L G F
Sbjct: 421 NLFTLINLQAKYGDRDGAIKTIEDMTGIGCQYSSILGIILQAYEKVGKIDVVPCVLKGSF 480
Query: 481 YRKVLKSQTSCSILAMTYVKHCLVDGALKLLREKEWNDQHFEENLYHLLICSCKDLGHLD 540
+ + +QTS S L M YVKH +VD L LLREK+W D FE +LYHLLICSCK+ G L
Sbjct: 481 HNHIRLNQTSFSSLVMAYVKHGMVDDCLGLLREKKWRDSAFESHLYHLLICSCKESGQLT 540
Query: 541 NAIKIYNQLPKRENNPNLHITCTMIDIYSIMGRFSEGEKLYLSLRSSGIPLDLIAFSVVV 600
+A+KIYN + + NLHIT TMIDIY++MG FSE EKLYL+L+SSG+ LD I FS+VV
Sbjct: 541 DAVKIYNHKMESDEEINLHITSTMIDIYTVMGEFSEAEKLYLNLKSSGVVLDRIGFSIVV 600
Query: 601 RMYVKAGSLEDACSVIDLMDERQDIVPDIYLLRDMLRIYQRCGMVNKLADLYYRILKRGV 660
RMYVKAGSLE+ACSV+++MDE++DIVPD+YL RDMLRIYQ+C + +KL LYYRI K G+
Sbjct: 601 RMYVKAGSLEEACSVLEIMDEQKDIVPDVYLFRDMLRIYQKCDLQDKLQHLYYRIRKSGI 660
Query: 661 SWDQEMYNCVINCCSRALPVDELSRIFDEMLHHGFAPNTVTLNVMLDVYGKSKLFTKARN 720
W+QEMYNCVINCC+RALP+DELS F+EM+ +GF PNTVT NV+LDVYGK+KLF K
Sbjct: 661 HWNQEMYNCVINCCARALPLDELSGTFEEMIRYGFTPNTVTFNVLLDVYGKAKLFKKVNE 720
Query: 721 LFGLAQKRGWVDAISYNTMISAYGKNKYFKNMSSTVKKMTYNGFSVSLEAYNCMLDAYGK 780
LF LA++ G VD ISYNT+I+AYGKNK + NMSS +K M ++GFSVSLEAYN +LDAYGK
Sbjct: 721 LFLLAKRHGVVDVISYNTIIAAYGKNKDYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGK 780
Query: 781 ECQMENFRSVLQEMKDSSSERDHFTYNIMINIYGEQGWINEVSEVLTELKACGLEPDLYS 840
+ QME FRS+L+ MK S+S DH+TYNIMINIYGEQGWI+EV++VL ELK GL PDL S
Sbjct: 781 DKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVADVLKELKESGLGPDLCS 840
Query: 841 YNTLIKAYGIAGMVEEAVLLVKEMREKGIEPDRITYINMVKALQRNDQFLEAIKWSLWMK 893
YNTLIKAYGI GMVEEAV LVKEMR + I PD++TY N+V AL+RND+FLEAIKWSLWMK
Sbjct: 841 YNTLIKAYGIGGMVEEAVGLVKEMRGRNIIPDKVTYTNLVTALRRNDEFLEAIKWSLWMK 900
BLAST of Sed0027468 vs. ExPASy Swiss-Prot
Match:
Q9SZ52 (Pentatricopeptide repeat-containing protein At4g31850, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PGR3 PE=1 SV=1)
HSP 1 Score: 197.2 bits (500), Expect = 7.9e-49
Identity = 180/792 (22.73%), Postives = 361/792 (45.58%), Query Frame = 0
Query: 100 NCSEKVFENVVFNGGELD-VDYSTISSDLSLDDCNAILKRLEKCNDSKTL----VFFEWM 159
+C+++VFE + + D V Y T+ L++ +D++ L F+ M
Sbjct: 310 DCAKEVFEKMKTGRHKPDRVTYITL---------------LDRFSDNRDLDSVKQFWSEM 369
Query: 160 RRNGKLEHNVTAYNMVLRVLGRREDWDAAEKLVAEVRPDLGSQFDYQIFNTLIYACYKLG 219
++G + +V + +++ L + ++ A + +V D G + +NTLI ++
Sbjct: 370 EKDGHVP-DVVTFTILVDALCKAGNFGEAFDTL-DVMRDQGILPNLHTYNTLICGLLRVH 429
Query: 220 LVERGAKWFRMMLECRVQPNVATFGMLMGLYQKGRDTKESEFAFNQMRNLGVVCE-TAYS 279
++ + F M V+P T+ + + Y K D+ + F +M+ G+ A +
Sbjct: 430 RLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACN 489
Query: 280 SMITIYLRTSLYGKAEDVIRFMQEDKVTPNLENWLVMLNTYCQQGKMEDAEVVFASMENA 339
+ + + +A+ + +++ + P+ + +M+ Y + G++++A + + M
Sbjct: 490 ASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMEN 549
Query: 340 GFSSNIIAYNTLITGYGKASNMDAAQRLFLGIKNSGVEPDETTYRSMIEGWGRAGNYKMA 399
G ++I N+LI KA +D A ++F+ +K ++P TY +++ G G+ G + A
Sbjct: 550 GCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEA 609
Query: 400 EWYYKELTRKGYTPNASNLFTLINLQAKHEDEAGALKTVNDMLKIGCRLSAVVGNVLQAY 459
++ + +KG PN TL + K+++ ALK + M+ +GC N + +
Sbjct: 610 IELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTI-IF 669
Query: 460 EKARRIQIVPLLLTGPFYRKVLKSQ--TSCSILAMTYVKHCLVDGALKLLREKEWNDQHF 519
+ Q+ + +K++ T C++L VK L++ A K++ +N
Sbjct: 670 GLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLLP-GVVKASLIEDAYKIITNFLYNCADQ 729
Query: 520 EENLY-HLLICSCKDLGHLDNAIKIYNQLPK----RENN----PNLHITCTMIDIYSIMG 579
NL+ LI S +DNA+ +L R+ + P + +C ++
Sbjct: 730 PANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGART 789
Query: 580 RFSEGEKLYLSLRSSGIPLDLIAFSVVVRMYVKAGSLEDACSVIDLMDERQDIVPDIYLL 639
F + K G+ L +++++ ++A +E A V L + +PD+
Sbjct: 790 LFEKFTK------DLGVQPKLPTYNLLIGGLLEADMIEIAQDVF-LQVKSTGCIPDVATY 849
Query: 640 RDMLRIYQRCGMVNKLADLYYRILKRGVSWDQEMYNCVINCCSRALPVDE-LSRIFDEML 699
+L Y + G +++L +LY + + +N VI+ +A VD+ L +D M
Sbjct: 850 NFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMS 909
Query: 700 HHGFAPNTVTLNVMLDVYGKSKLFTKARNLF-GLAQKRGWVDAISYNTMISAYGKNKYFK 759
F+P T ++D KS +A+ LF G+ + YN +I+ +GK
Sbjct: 910 DRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEAD 969
Query: 760 NMSSTVKKMTYNGFSVSLEAYNCMLDAYGKECQMENFRSVLQEMKDSSSERDHFTYNIMI 819
+ K+M G L+ Y+ ++D +++ +E+K+S D YN++I
Sbjct: 970 AACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLII 1029
Query: 820 NIYGEQGWINEVSEVLTELKAC-GLEPDLYSYNTLIKAYGIAGMVEEAVLLVKEMREKGI 872
N G+ + E + E+K G+ PDLY+YN+LI GIAGMVEEA + E++ G+
Sbjct: 1030 NGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGL 1075
BLAST of Sed0027468 vs. ExPASy Swiss-Prot
Match:
B8Y6I0 (Pentatricopeptide repeat-containing protein 10, chloroplastic OS=Zea mays OX=4577 GN=PPR10 PE=1 SV=1)
HSP 1 Score: 184.1 bits (466), Expect = 6.9e-45
Identity = 143/709 (20.17%), Postives = 297/709 (41.89%), Query Frame = 0
Query: 131 DCNAILKRLEKCNDSK-TLVFFEWMRRNGKLEHNVTAYNMVLRVLGRREDWDAAEKLVAE 190
D ++LK LE + L W + G + +A MV+R LGR DA L+ E
Sbjct: 106 DITSLLKALELSGHWEWALALLRWAGKEGAAD--ASALEMVVRALGREGQHDAVCALLDE 165
Query: 191 VRPDLGSQFDYQIFNTLIYACYKLGLVERGAKWFRMMLECRVQPNVATFGMLMGLY-QKG 250
GS+ D + + T+++A + G ER + F + V P + T+ +++ +Y + G
Sbjct: 166 TPLPPGSRLDVRAYTTVLHALSRAGRYERALELFAELRRQGVAPTLVTYNVVLDVYGRMG 225
Query: 251 RDTKESEFAFNQMRNLGVVCETAYSSMITIYLRTSLYGKAEDVIRFMQEDKV---TPNLE 310
R ++MR GV + +S T+ G ++ + F ++ K P +
Sbjct: 226 RSWPRIVALLDEMRAAGVEPDGFTAS--TVIAACCRDGLVDEAVAFFEDLKARGHAPCVV 285
Query: 311 NWLVMLNTYCQQGKMEDAEVVFASMENAGFSSNIIAYNTLITGYGKASNMDAAQRLFLGI 370
+ +L + + G +A V ME G + + YN L Y +A + A R +
Sbjct: 286 TYNALLQVFGKAGNYTEALRVLGEMEQNGCQPDAVTYNELAGTYARAGFFEEAARCLDTM 345
Query: 371 KNSGVEPDETTYRSMIEGWGRAGNYKMAEWYYKELTRKGYTPNASNLFTLINLQAKHEDE 430
+ G+ P+ TY +++ +G G A + ++ + G+ PN + ++ + K
Sbjct: 346 ASKGLLPNAFTYNTVMTAYGNVGKVDEALALFDQMKKTGFVPNVNTYNLVLGMLGKKSRF 405
Query: 431 AGALKTVNDMLKIGCRLSAVVGNVLQAYEKARRIQIVPLLLTGPFYRKVLKSQTSCSILA 490
L+ + +M + GC + V N + A R ++ + +VL+ SC +
Sbjct: 406 TVMLEMLGEMSRSGCTPNRVTWNTMLAVCGKRGME--------DYVTRVLEGMRSCGV-- 465
Query: 491 MTYVKHCLVDGALKLLREKEWNDQHFEENLYHLLICSCKDLGHLDNAIKIYNQLPKRENN 550
+ Y+ LI + G NA K+YN++
Sbjct: 466 ------------------------ELSRDTYNTLIAAYGRCGSRTNAFKMYNEMTSAGFT 525
Query: 551 PNLHITCTMIDIYSIMGRFSEGEKLYLSLRSSGIPLDLIAFSVVVRMYVKAGSLEDACSV 610
P + ++++ S G +S + + +R+ G + ++S++++ Y K G++ ++
Sbjct: 526 PCITTYNALLNVLSRQGDWSTAQSIVSKMRTKGFKPNEQSYSLLLQCYAKGGNVAGIAAI 585
Query: 611 IDLMDERQDIVPDIYLLRDMLRIYQRCGMVNKLADLYYRILKRGVSWDQEMYNCVINCCS 670
+ + + P +LR ++ +C ++ + + + RG + D ++N +++ +
Sbjct: 586 ENEVYGSGAVFPSWVILRTLVIANFKCRRLDGMETAFQEVKARGYNPDLVIFNSMLSIYA 645
Query: 671 RALPVDELSRIFDEMLHHGFAPNTVTLNVMLDVYGKSKLFTKARNLFGLAQKRGWV--DA 730
+ + + +FD + G +P+ +T N ++D+Y K +A + + + D
Sbjct: 646 KNGMYSKATEVFDSIKRSGLSPDLITYNSLMDMYAKCSESWEAEKILNQLKCSQTMKPDV 705
Query: 731 ISYNTMISAYGKNKYFKNMSSTVKKMTYNGFSVSLEAYNCMLDAYGKECQMENFRSVLQE 790
+SYNT+I+ + K K + +M +G + Y+ ++ Y R V+
Sbjct: 706 VSYNTVINGFCKQGLVKEAQRVLSEMVADGMAPCAVTYHTLVGGYSSLEMFSEAREVIGY 765
Query: 791 MKDSSSERDHFTYNIMINIY-------GEQGWINEVSEVLTELKACGLE 826
M + TY ++ Y +G+++EVSE + LE
Sbjct: 766 MVQHGLKPMELTYRRVVESYCRAKRFEEARGFLSEVSETDLDFDKKALE 776
BLAST of Sed0027468 vs. ExPASy Swiss-Prot
Match:
Q9LYZ9 (Pentatricopeptide repeat-containing protein At5g02860 OS=Arabidopsis thaliana OX=3702 GN=At5g02860 PE=2 SV=1)
HSP 1 Score: 181.8 bits (460), Expect = 3.4e-44
Identity = 136/599 (22.70%), Postives = 262/599 (43.74%), Query Frame = 0
Query: 294 FMQEDKVTPNLENWLV--MLNTYCQQGKMEDAEVVFASMENAGFSSNIIAYNTLITGYGK 353
FM++ L+N +V +++ ++G++ A +F ++ GFS ++ +Y +LI+ +
Sbjct: 161 FMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFAN 220
Query: 354 ASNMDAAQRLFLGIKNSGVEPDETTYRSMIEGWGRAGN-YKMAEWYYKELTRKGYTPNAS 413
+ A +F ++ G +P TY ++ +G+ G + +++ G P+A
Sbjct: 221 SGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAY 280
Query: 414 NLFTLINLQAKHEDEAGALKTVNDMLKIGCRLSAVVGN-VLQAYEKARRIQIVPLLLTGP 473
TLI + A + +M G V N +L Y K+ R + +L
Sbjct: 281 TYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEM 340
Query: 474 FYRKVLKSQTSCSILAMTYVKHCLVDGALKLLREKEWNDQHFEENLYHLLICSCKDLGHL 533
S + + L Y + ++D A++L + + Y L+ + G +
Sbjct: 341 VLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKV 400
Query: 534 DNAIKIYNQLPKRENNPNLHITCTMIDIYSIMGRFSEGEKLYLSLRSSGIPLDLIAFSVV 593
++A+ I+ ++ PN+ I +Y G+F+E K++ + G+ D++ ++ +
Sbjct: 401 ESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTL 460
Query: 594 VRMYVKAGSLEDACSVIDLMDERQDIVPDIYLLRDMLRIYQRCGMVNKLADLYYRILKRG 653
+ ++ + G + V M +R VP+ ++ Y RCG + +Y R+L G
Sbjct: 461 LAVFGQNGMDSEVSGVFKEM-KRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAG 520
Query: 654 VSWDQEMYNCVINCCSRALPVDELSRIFDEMLHHGFAPNTVTLNVMLDVYGKSK----LF 713
V+ D YN V+ +R ++ ++ EM PN +T +L Y K +
Sbjct: 521 VTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMH 580
Query: 714 TKARNLF-GLAQKRGWVDAISYNTMISAYGKNKYFKNMSSTVKKMTYNGFSVSLEAYNCM 773
+ A ++ G+ + R A+ T++ K ++ GFS + N M
Sbjct: 581 SLAEEVYSGVIEPR----AVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSM 640
Query: 774 LDAYGKECQMENFRSVLQEMKDSSSERDHFTYNIMINIYGEQGWINEVSEVLTELKACGL 833
+ YG+ + VL MK+ TYN ++ ++ + E+L E+ A G+
Sbjct: 641 VSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGI 700
Query: 834 EPDLYSYNTLIKAYGIAGMVEEAVLLVKEMREKGIEPDRITYINMVKALQRNDQFLEAI 884
+PD+ SYNT+I AY + +A + EMR GI PD ITY + + + F EAI
Sbjct: 701 KPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAI 754
BLAST of Sed0027468 vs. ExPASy Swiss-Prot
Match:
Q940A6 (Pentatricopeptide repeat-containing protein At4g19440, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At4g19440 PE=2 SV=2)
HSP 1 Score: 175.3 bits (443), Expect = 3.2e-42
Identity = 144/591 (24.37%), Postives = 260/591 (43.99%), Query Frame = 0
Query: 300 VTPNLENWLVMLNTYCQQGKMEDAEVVFASMENAGFSSNIIAYNTLITGYGKASNMDAAQ 359
V+P++ + +N +C+ GK+E+A +F+ ME AG + N++ +NT+I G G D A
Sbjct: 269 VSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAF 328
Query: 360 RLFLGIKNSGVEPDETTYRSMIEGWGRAGNYKMAEWYYKELTRKGYTPNASNLFTLINLQ 419
+ G+EP TY +++G RA A + KE+T+KG+ PN LI+
Sbjct: 329 MFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSF 388
Query: 420 AKHEDEAGALKTVNDMLKIGCRLSAVVGNVLQAYEKARRIQIVPLLLTGPFYRKVLKSQT 479
EAG+L +A E + L LT Y ++K
Sbjct: 389 I----EAGSLN--------------------KAIEIKDLMVSKGLSLTSSTYNTLIKG-- 448
Query: 480 SCSILAMTYVKHCLVDGALKLLREKEWNDQHFEENLYHLLICSCKDLGHLDNAIKIYNQL 539
Y K+ D A +LL+E + + + +IC D+A++ ++
Sbjct: 449 --------YCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEM 508
Query: 540 PKRENNPNLHITCTMIDIYSIMGRFSEGEKLYLSLRSSGIPLDLIAFSVVVRMYVKAGSL 599
R +P + T+I G+ S+ +L+ + G +D + ++ +AG L
Sbjct: 509 LLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKL 568
Query: 600 EDACSVIDLMDERQDIVPDIYLLRDMLRIYQRCGMVNKLADLYY---RILKRGVSWDQEM 659
++A + + R ++ + + C KL + + ++KRG+ D
Sbjct: 569 DEAFRIQKEILGRGCVMDRV----SYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYT 628
Query: 660 YNCVINCCSRALPVDELSRIFDEMLHHGFAPNTVTLNVMLDVYGKSKLFTKARNLFG-LA 719
Y+ +I V+E + +D+ +G P+ T +VM+D K++ + + F +
Sbjct: 629 YSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMM 688
Query: 720 QKRGWVDAISYNTMISAYGKNKYFKNMSSTVKKMTYNGFSVSLEAYNCMLDAYGKECQME 779
K + + YN +I AY ++ + M + G S + Y ++ ++E
Sbjct: 689 SKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVE 748
Query: 780 NFRSVLQEMKDSSSERDHFTYNIMINIYGEQGWINEVSEVLTELKACGLEPDLYSYNTLI 839
+ + +EM+ E + F Y +I+ YG+ G + +V +L E+ + + P+ +Y +I
Sbjct: 749 EAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMI 808
Query: 840 KAYGIAGMVEEAVLLVKEMREKGIEPDRITYINMVKALQRNDQFLEAIKWS 887
Y G V EA L+ EMREKGI PD ITY + + LEA K S
Sbjct: 809 GGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGS 821
BLAST of Sed0027468 vs. ExPASy TrEMBL
Match:
A0A6J1BZD7 (pentatricopeptide repeat-containing protein At4g30825, chloroplastic isoform X1 OS=Momordica charantia OX=3673 GN=LOC111007115 PE=3 SV=1)
HSP 1 Score: 1548.1 bits (4007), Expect = 0.0e+00
Identity = 766/904 (84.73%), Postives = 827/904 (91.48%), Query Frame = 0
Query: 1 MASLKFSFSLHSFDSNKFNFPVKSSLLSDCCSVFSITGYIHLNQSCILYSLARVHKPCWV 60
MASLK SF L SFDS KF+FPVKS+LLSD CSVFSITGYIHLN+SCILYSLARVHKP V
Sbjct: 1 MASLKISFPLDSFDSKKFDFPVKSALLSDICSVFSITGYIHLNKSCILYSLARVHKPSKV 60
Query: 61 SQV----------RCVVDEIDTRKKCVGSKKSSKRRSGSGSGSNFSFSGNCSEKVFENVV 120
SQV + V DEI RKK VG+KK SKR GS FSFS NCSEKVF+N++
Sbjct: 61 SQVEPEASDIYQSKFVDDEIGARKKYVGNKKPSKR----APGSYFSFSRNCSEKVFDNII 120
Query: 121 FNGGELDVDYSTISSDLSLDDCNAILKRLEKCNDSKTLVFFEWMRRNGKLEHNVTAYNMV 180
FNGGE+DV+YSTISSDLSL+DCNAIL++LEKCND KTLVFFEWMRRNGKLEHNVTAYN+V
Sbjct: 121 FNGGEMDVNYSTISSDLSLEDCNAILRKLEKCNDGKTLVFFEWMRRNGKLEHNVTAYNLV 180
Query: 181 LRVLGRREDWDAAEKLVAEVRPDLGSQFDYQIFNTLIYACYKLGLVERGAKWFRMMLECR 240
LRVLGR+EDWDAAEKL+ +VR DLGSQ D+QIFNTLIYACYK GLV+RGAKWFRMMLECR
Sbjct: 181 LRVLGRQEDWDAAEKLIRQVRADLGSQLDFQIFNTLIYACYKSGLVDRGAKWFRMMLECR 240
Query: 241 VQPNVATFGMLMGLYQKGRDTKESEFAFNQMRNLGVVCETAYSSMITIYLRTSLYGKAED 300
VQPNVATFGMLMGL QKG + +E+EFAF+QMR+ G+VCE Y+SMITIY R SLY KAE+
Sbjct: 241 VQPNVATFGMLMGLCQKGCNVEEAEFAFSQMRSFGIVCEAMYASMITIYARLSLYDKAEE 300
Query: 301 VIRFMQEDKVTPNLENWLVMLNTYCQQGKMEDAEVVFASMENAGFSSNIIAYNTLITGYG 360
VI+ MQEDKVTPNLENWLVMLNTYCQQGK+EDAE+VFASME AGFSSNIIAYNTLITGYG
Sbjct: 301 VIQLMQEDKVTPNLENWLVMLNTYCQQGKLEDAELVFASMEEAGFSSNIIAYNTLITGYG 360
Query: 361 KASNMDAAQRLFLGIKNSGVEPDETTYRSMIEGWGRAGNYKMAEWYYKELTRKGYTPNAS 420
K SNMDAA+RLFLGIKNSG EPDETTYRSMIEGWGRAGNY+MAEWYYKEL RKGY PN S
Sbjct: 361 KVSNMDAAERLFLGIKNSGAEPDETTYRSMIEGWGRAGNYEMAEWYYKELKRKGYMPNTS 420
Query: 421 NLFTLINLQAKHEDEAGALKTVNDMLKIGCRLSAVVGNVLQAYEKARRIQIVPLLLTGPF 480
NLFTLINLQAKHEDEAGAL+T++DMLKIGCR S++VGNVLQAYEKARRI+ VPLLLTG F
Sbjct: 421 NLFTLINLQAKHEDEAGALETLDDMLKIGCRPSSIVGNVLQAYEKARRIKSVPLLLTGSF 480
Query: 481 YRKVLKSQTSCSILAMTYVKHCLVDGALKLLREKEWNDQHFEENLYHLLICSCKDLGHLD 540
Y KVL SQTSCSIL M Y+KHCLVD ALK+LREKEWND +FEENLYHLLICSCK+LG L+
Sbjct: 481 YCKVLSSQTSCSILVMAYMKHCLVDDALKILREKEWNDHNFEENLYHLLICSCKELGQLE 540
Query: 541 NAIKIYNQLPKRENNPNLHITCTMIDIYSIMGRFSEGEKLYLSLRSSGIPLDLIAFSVVV 600
NAIKIY QLPKREN PNLHITCTMIDIYSIMG+FSEGEKLYLSLRSS IPLDLIAF+VVV
Sbjct: 541 NAIKIYTQLPKRENKPNLHITCTMIDIYSIMGKFSEGEKLYLSLRSSDIPLDLIAFNVVV 600
Query: 601 RMYVKAGSLEDACSVIDLMDERQDIVPDIYLLRDMLRIYQRCGMVNKLADLYYRILKRGV 660
RMYVKAGSLEDAC V+DLMD++QDIVPD+YLLRDMLRIYQRCGMV+KLADLYYRILK GV
Sbjct: 601 RMYVKAGSLEDACLVLDLMDQQQDIVPDVYLLRDMLRIYQRCGMVDKLADLYYRILKSGV 660
Query: 661 SWDQEMYNCVINCCSRALPVDELSRIFDEMLHHGFAPNTVTLNVMLDVYGKSKLFTKARN 720
SWDQEMYNCVINCCSRALPVDELSR+FDEMLH GFAPNTVTLNVMLDVYGKSKLFTKARN
Sbjct: 661 SWDQEMYNCVINCCSRALPVDELSRLFDEMLHRGFAPNTVTLNVMLDVYGKSKLFTKARN 720
Query: 721 LFGLAQKRGWVDAISYNTMISAYGKNKYFKNMSSTVKKMTYNGFSVSLEAYNCMLDAYGK 780
LFGLAQKRG VD ISYNTMISAYGKNK FKNMSSTV+KM +NGFSVSLEAYNCMLDAYGK
Sbjct: 721 LFGLAQKRGLVDVISYNTMISAYGKNKDFKNMSSTVQKMKFNGFSVSLEAYNCMLDAYGK 780
Query: 781 ECQMENFRSVLQEMKDSSSERDHFTYNIMINIYGEQGWINEVSEVLTELKACGLEPDLYS 840
ECQME+FRSVLQ MK+S +ERD +TYNIMINIYGEQGWI+EV+EVLTEL+ CGLEPDLYS
Sbjct: 781 ECQMESFRSVLQRMKESCAERDRYTYNIMINIYGEQGWIDEVAEVLTELRECGLEPDLYS 840
Query: 841 YNTLIKAYGIAGMVEEAVLLVKEMREKGIEPDRITYINMVKALQRNDQFLEAIKWSLWMK 895
YNTLIKAYGIAGMVEEAVLLVKEMREK IEPDRITYINM+KALQRNDQFLEAIKWSLWMK
Sbjct: 841 YNTLIKAYGIAGMVEEAVLLVKEMREKRIEPDRITYINMIKALQRNDQFLEAIKWSLWMK 900
BLAST of Sed0027468 vs. ExPASy TrEMBL
Match:
A0A5A7SYW6 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold271G00420 PE=4 SV=1)
HSP 1 Score: 1535.8 bits (3975), Expect = 0.0e+00
Identity = 758/902 (84.04%), Postives = 823/902 (91.24%), Query Frame = 0
Query: 1 MASLKFSFSLHSFDSNKFNFPVKSSLLSDCCSVFSITGYIHLNQSCILYSLARVHKPCWV 60
MASLK SFSLHSFDSNKF+FPV S LSD CS+FSI GYIHLN+SCILYSLARVHKP V
Sbjct: 1 MASLKLSFSLHSFDSNKFDFPVNSPPLSDYCSLFSINGYIHLNKSCILYSLARVHKPSKV 60
Query: 61 SQV--------RCVVDEIDTRKKCVGSKKSSKRRSGSGSGSNFSFSGNCSEKVFENVVFN 120
SQV + D+ID+RKK +KK SKR +GS+FSFS NCSEK+FEN++F+
Sbjct: 61 SQVEPEASDVSQSRFDDIDSRKKYFTAKKPSKR----AAGSHFSFSRNCSEKIFENILFS 120
Query: 121 GGELDVDYSTISSDLSLDDCNAILKRLEKCNDSKTLVFFEWMRRNGKLEHNVTAYNMVLR 180
GGELDV+YSTISSDLSL+ CNAILKRLEKCNDSKTL FFEWMR NGKL+HNV+AYN+VLR
Sbjct: 121 GGELDVNYSTISSDLSLEGCNAILKRLEKCNDSKTLDFFEWMRSNGKLKHNVSAYNLVLR 180
Query: 181 VLGRREDWDAAEKLVAEVRPDLGSQFDYQIFNTLIYACYKLGLVERGAKWFRMMLECRVQ 240
VLGR+EDWDAAEKL+ EVR +LGSQ D+Q+FNTLIYACYK G VE G KWFRMMLEC+VQ
Sbjct: 181 VLGRQEDWDAAEKLIKEVRAELGSQLDFQVFNTLIYACYKSGFVEWGTKWFRMMLECQVQ 240
Query: 241 PNVATFGMLMGLYQKGRDTKESEFAFNQMRNLGVVCETAYSSMITIYLRTSLYGKAEDVI 300
PNVATFGMLMGLYQK D +ESEFAFNQMRN G+VCETAY+SMITIY+R +LY KAE+VI
Sbjct: 241 PNVATFGMLMGLYQKSCDIEESEFAFNQMRNFGIVCETAYASMITIYIRMNLYDKAEEVI 300
Query: 301 RFMQEDKVTPNLENWLVMLNTYCQQGKMEDAEVVFASMENAGFSSNIIAYNTLITGYGKA 360
+ MQ+DKV PNLENWLVMLN YCQQGKME+AE+VFASME AGFSSNIIAYNTLITGYGKA
Sbjct: 301 QLMQKDKVIPNLENWLVMLNAYCQQGKMEEAELVFASMEEAGFSSNIIAYNTLITGYGKA 360
Query: 361 SNMDAAQRLFLGIKNSGVEPDETTYRSMIEGWGRAGNYKMAEWYYKELTRKGYTPNASNL 420
SNMD AQRLFLGIKNSGVEPDETTYRSMIEGWGRAGNYKMAEWYYKEL RKGY PN+SNL
Sbjct: 361 SNMDTAQRLFLGIKNSGVEPDETTYRSMIEGWGRAGNYKMAEWYYKELKRKGYMPNSSNL 420
Query: 421 FTLINLQAKHEDEAGALKTVNDMLKIGCRLSAVVGNVLQAYEKARRIQIVPLLLTGPFYR 480
FTLINLQAKHEDEAGALKT+NDMLKIGCR S++VGNVLQAYEKARRI+ VP+LLTG FYR
Sbjct: 421 FTLINLQAKHEDEAGALKTLNDMLKIGCRPSSIVGNVLQAYEKARRIKSVPVLLTGSFYR 480
Query: 481 KVLKSQTSCSILAMTYVKHCLVDGALKLLREKEWNDQHFEENLYHLLICSCKDLGHLDNA 540
KVL SQTSCSIL M YVKHCLVD ALK+LREKEW D HFEENLYHLLICSCK+LGH ++A
Sbjct: 481 KVLSSQTSCSILVMAYVKHCLVDDALKVLREKEWKDHHFEENLYHLLICSCKELGHFESA 540
Query: 541 IKIYNQLPKRENNPNLHITCTMIDIYSIMGRFSEGEKLYLSLRSSGIPLDLIAFSVVVRM 600
IKIY Q PKREN PNLHITCTMIDIYSIMGRFS+GEKLYLSLRSSGIPLDLIA++VVVRM
Sbjct: 541 IKIYAQRPKRENKPNLHITCTMIDIYSIMGRFSDGEKLYLSLRSSGIPLDLIAYNVVVRM 600
Query: 601 YVKAGSLEDACSVIDLMDERQDIVPDIYLLRDMLRIYQRCGMVNKLADLYYRILKRGVSW 660
YVKAGSLEDACSV+DLM E+QDIVPD+YLLRDMLRIYQRCGMV+KL+DLYYRILK GVSW
Sbjct: 601 YVKAGSLEDACSVLDLMAEQQDIVPDVYLLRDMLRIYQRCGMVHKLSDLYYRILKSGVSW 660
Query: 661 DQEMYNCVINCCSRALPVDELSRIFDEMLHHGFAPNTVTLNVMLDVYGKSKLFTKARNLF 720
DQEMYNCVINCCSRALPVDELSR+FDEML GFAPNTVTLNVMLDVYGKSKLF KARNLF
Sbjct: 661 DQEMYNCVINCCSRALPVDELSRLFDEMLQCGFAPNTVTLNVMLDVYGKSKLFAKARNLF 720
Query: 721 GLAQKRGWVDAISYNTMISAYGKNKYFKNMSSTVKKMTYNGFSVSLEAYNCMLDAYGKEC 780
G AQKRG VDAISYNTMIS YGKNK FKNMSSTV++M +NGFSVSLEAYNCMLDAYGKEC
Sbjct: 721 GFAQKRGLVDAISYNTMISVYGKNKDFKNMSSTVQQMKFNGFSVSLEAYNCMLDAYGKEC 780
Query: 781 QMENFRSVLQEMKDSSSERDHFTYNIMINIYGEQGWINEVSEVLTELKACGLEPDLYSYN 840
QMENFRSVLQ M++S+SE DH+TYNIMINIYGE+GWI+EV+EVLTELKACGLEPDLYSYN
Sbjct: 781 QMENFRSVLQRMQESTSECDHYTYNIMINIYGERGWIDEVAEVLTELKACGLEPDLYSYN 840
Query: 841 TLIKAYGIAGMVEEAVLLVKEMREKGIEPDRITYINMVKALQRNDQFLEAIKWSLWMKQM 895
TLIKAYGIAGMVEEA LVKEMREKGIEPDRITYINM++ALQRNDQFLEAIKWSLWMKQM
Sbjct: 841 TLIKAYGIAGMVEEAARLVKEMREKGIEPDRITYINMIRALQRNDQFLEAIKWSLWMKQM 898
BLAST of Sed0027468 vs. ExPASy TrEMBL
Match:
A0A1S4DV41 (pentatricopeptide repeat-containing protein At4g30825, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103487334 PE=4 SV=1)
HSP 1 Score: 1535.8 bits (3975), Expect = 0.0e+00
Identity = 758/902 (84.04%), Postives = 823/902 (91.24%), Query Frame = 0
Query: 1 MASLKFSFSLHSFDSNKFNFPVKSSLLSDCCSVFSITGYIHLNQSCILYSLARVHKPCWV 60
MASLK SFSLHSFDSNKF+FPV S LSD CS+FSI GYIHLN+SCILYSLARVHKP V
Sbjct: 1 MASLKLSFSLHSFDSNKFDFPVNSPPLSDYCSLFSINGYIHLNKSCILYSLARVHKPSKV 60
Query: 61 SQV--------RCVVDEIDTRKKCVGSKKSSKRRSGSGSGSNFSFSGNCSEKVFENVVFN 120
SQV + D+ID+RKK +KK SKR +GS+FSFS NCSEK+FEN++F+
Sbjct: 61 SQVEPEASDVSQSRFDDIDSRKKYFTAKKPSKR----AAGSHFSFSRNCSEKIFENILFS 120
Query: 121 GGELDVDYSTISSDLSLDDCNAILKRLEKCNDSKTLVFFEWMRRNGKLEHNVTAYNMVLR 180
GGELDV+YSTISSDLSL+ CNAILKRLEKCNDSKTL FFEWMR NGKL+HNV+AYN+VLR
Sbjct: 121 GGELDVNYSTISSDLSLEGCNAILKRLEKCNDSKTLDFFEWMRSNGKLKHNVSAYNLVLR 180
Query: 181 VLGRREDWDAAEKLVAEVRPDLGSQFDYQIFNTLIYACYKLGLVERGAKWFRMMLECRVQ 240
VLGR+EDWDAAEKL+ EVR +LGSQ D+Q+FNTLIYACYK G VE G KWFRMMLEC+VQ
Sbjct: 181 VLGRQEDWDAAEKLIKEVRAELGSQLDFQVFNTLIYACYKSGFVEWGTKWFRMMLECQVQ 240
Query: 241 PNVATFGMLMGLYQKGRDTKESEFAFNQMRNLGVVCETAYSSMITIYLRTSLYGKAEDVI 300
PNVATFGMLMGLYQK D +ESEFAFNQMRN G+VCETAY+SMITIY+R +LY KAE+VI
Sbjct: 241 PNVATFGMLMGLYQKSCDIEESEFAFNQMRNFGIVCETAYASMITIYIRMNLYDKAEEVI 300
Query: 301 RFMQEDKVTPNLENWLVMLNTYCQQGKMEDAEVVFASMENAGFSSNIIAYNTLITGYGKA 360
+ MQ+DKV PNLENWLVMLN YCQQGKME+AE+VFASME AGFSSNIIAYNTLITGYGKA
Sbjct: 301 QLMQKDKVIPNLENWLVMLNAYCQQGKMEEAELVFASMEEAGFSSNIIAYNTLITGYGKA 360
Query: 361 SNMDAAQRLFLGIKNSGVEPDETTYRSMIEGWGRAGNYKMAEWYYKELTRKGYTPNASNL 420
SNMD AQRLFLGIKNSGVEPDETTYRSMIEGWGRAGNYKMAEWYYKEL RKGY PN+SNL
Sbjct: 361 SNMDTAQRLFLGIKNSGVEPDETTYRSMIEGWGRAGNYKMAEWYYKELKRKGYMPNSSNL 420
Query: 421 FTLINLQAKHEDEAGALKTVNDMLKIGCRLSAVVGNVLQAYEKARRIQIVPLLLTGPFYR 480
FTLINLQAKHEDEAGALKT+NDMLKIGCR S++VGNVLQAYEKARRI+ VP+LLTG FYR
Sbjct: 421 FTLINLQAKHEDEAGALKTLNDMLKIGCRPSSIVGNVLQAYEKARRIKSVPVLLTGSFYR 480
Query: 481 KVLKSQTSCSILAMTYVKHCLVDGALKLLREKEWNDQHFEENLYHLLICSCKDLGHLDNA 540
KVL SQTSCSIL M YVKHCLVD ALK+LREKEW D HFEENLYHLLICSCK+LGH ++A
Sbjct: 481 KVLSSQTSCSILVMAYVKHCLVDDALKVLREKEWKDHHFEENLYHLLICSCKELGHFESA 540
Query: 541 IKIYNQLPKRENNPNLHITCTMIDIYSIMGRFSEGEKLYLSLRSSGIPLDLIAFSVVVRM 600
IKIY Q PKREN PNLHITCTMIDIYSIMGRFS+GEKLYLSLRSSGIPLDLIA++VVVRM
Sbjct: 541 IKIYAQRPKRENKPNLHITCTMIDIYSIMGRFSDGEKLYLSLRSSGIPLDLIAYNVVVRM 600
Query: 601 YVKAGSLEDACSVIDLMDERQDIVPDIYLLRDMLRIYQRCGMVNKLADLYYRILKRGVSW 660
YVKAGSLEDACSV+DLM E+QDIVPD+YLLRDMLRIYQRCGMV+KL+DLYYRILK GVSW
Sbjct: 601 YVKAGSLEDACSVLDLMAEQQDIVPDVYLLRDMLRIYQRCGMVHKLSDLYYRILKSGVSW 660
Query: 661 DQEMYNCVINCCSRALPVDELSRIFDEMLHHGFAPNTVTLNVMLDVYGKSKLFTKARNLF 720
DQEMYNCVINCCSRALPVDELSR+FDEML GFAPNTVTLNVMLDVYGKSKLF KARNLF
Sbjct: 661 DQEMYNCVINCCSRALPVDELSRLFDEMLQCGFAPNTVTLNVMLDVYGKSKLFAKARNLF 720
Query: 721 GLAQKRGWVDAISYNTMISAYGKNKYFKNMSSTVKKMTYNGFSVSLEAYNCMLDAYGKEC 780
G AQKRG VDAISYNTMIS YGKNK FKNMSSTV++M +NGFSVSLEAYNCMLDAYGKEC
Sbjct: 721 GFAQKRGLVDAISYNTMISVYGKNKDFKNMSSTVQQMKFNGFSVSLEAYNCMLDAYGKEC 780
Query: 781 QMENFRSVLQEMKDSSSERDHFTYNIMINIYGEQGWINEVSEVLTELKACGLEPDLYSYN 840
QMENFRSVLQ M++S+SE DH+TYNIMINIYGE+GWI+EV+EVLTELKACGLEPDLYSYN
Sbjct: 781 QMENFRSVLQRMQESTSECDHYTYNIMINIYGERGWIDEVAEVLTELKACGLEPDLYSYN 840
Query: 841 TLIKAYGIAGMVEEAVLLVKEMREKGIEPDRITYINMVKALQRNDQFLEAIKWSLWMKQM 895
TLIKAYGIAGMVEEA LVKEMREKGIEPDRITYINM++ALQRNDQFLEAIKWSLWMKQM
Sbjct: 841 TLIKAYGIAGMVEEAARLVKEMREKGIEPDRITYINMIRALQRNDQFLEAIKWSLWMKQM 898
BLAST of Sed0027468 vs. ExPASy TrEMBL
Match:
A0A0A0LTR9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G257890 PE=4 SV=1)
HSP 1 Score: 1521.9 bits (3939), Expect = 0.0e+00
Identity = 755/902 (83.70%), Postives = 819/902 (90.80%), Query Frame = 0
Query: 1 MASLKFSFSLHSFDSNKFNFPVKSSLLSDCCSVFSITGYIHLNQSCILYSLARVHKPCWV 60
MASLK SFSLHSFDSNKF+FP+ S LLSD CS+FSI ++HLN+S I+YSLARVHKP V
Sbjct: 1 MASLKLSFSLHSFDSNKFDFPLNSPLLSDYCSLFSINAHLHLNKSSIIYSLARVHKPSKV 60
Query: 61 SQV--------RCVVDEIDTRKKCVGSKKSSKRRSGSGSGSNFSFSGNCSEKVFENVVFN 120
SQV + DEI RKK SKK SKR +GS+FSFS NC+ +N++FN
Sbjct: 61 SQVEQDASDVSQSRFDEIVARKKYFTSKKPSKR----AAGSHFSFSRNCN----DNILFN 120
Query: 121 GGELDVDYSTISSDLSLDDCNAILKRLEKCNDSKTLVFFEWMRRNGKLEHNVTAYNMVLR 180
GGELDV+YSTISSDLSL+DCNAILKRLEKCNDSKTL FFEWMR NGKL+HNV+AYN+VLR
Sbjct: 121 GGELDVNYSTISSDLSLEDCNAILKRLEKCNDSKTLGFFEWMRSNGKLKHNVSAYNLVLR 180
Query: 181 VLGRREDWDAAEKLVAEVRPDLGSQFDYQIFNTLIYACYKLGLVERGAKWFRMMLECRVQ 240
VLGR+EDWDAAEKL+ EVR +LGSQ D+Q+FNTLIYACYK VE+G KWFRMMLEC+VQ
Sbjct: 181 VLGRQEDWDAAEKLIEEVRAELGSQLDFQVFNTLIYACYKSRFVEQGTKWFRMMLECQVQ 240
Query: 241 PNVATFGMLMGLYQKGRDTKESEFAFNQMRNLGVVCETAYSSMITIYLRTSLYGKAEDVI 300
PNVATFGMLMGLYQK D KESEFAFNQMRN G+VCETAY+SMITIY+R +LY KAE+VI
Sbjct: 241 PNVATFGMLMGLYQKKCDIKESEFAFNQMRNFGIVCETAYASMITIYIRMNLYDKAEEVI 300
Query: 301 RFMQEDKVTPNLENWLVMLNTYCQQGKMEDAEVVFASMENAGFSSNIIAYNTLITGYGKA 360
+ MQEDKV PNLENW+VMLN YCQQGKME+AE+VFASME AGFSSNIIAYNTLITGYGKA
Sbjct: 301 QLMQEDKVIPNLENWVVMLNAYCQQGKMEEAELVFASMEEAGFSSNIIAYNTLITGYGKA 360
Query: 361 SNMDAAQRLFLGIKNSGVEPDETTYRSMIEGWGRAGNYKMAEWYYKELTRKGYTPNASNL 420
SNMD AQRLFLGIKNSGVEPDETTYRSMIEGWGRAGNYKMAEWYYKEL R+GY PN+SNL
Sbjct: 361 SNMDTAQRLFLGIKNSGVEPDETTYRSMIEGWGRAGNYKMAEWYYKELKRRGYMPNSSNL 420
Query: 421 FTLINLQAKHEDEAGALKTVNDMLKIGCRLSAVVGNVLQAYEKARRIQIVPLLLTGPFYR 480
FTLINLQAKHEDEAG LKT+NDMLKIGCR S++VGNVLQAYEKARR++ VP+LLTG FYR
Sbjct: 421 FTLINLQAKHEDEAGTLKTLNDMLKIGCRPSSIVGNVLQAYEKARRMKSVPVLLTGSFYR 480
Query: 481 KVLKSQTSCSILAMTYVKHCLVDGALKLLREKEWNDQHFEENLYHLLICSCKDLGHLDNA 540
KVL SQTSCSIL M YVKHCLVD ALK+LREKEW D HFEENLYHLLICSCK+LGHL+NA
Sbjct: 481 KVLSSQTSCSILVMAYVKHCLVDDALKVLREKEWKDHHFEENLYHLLICSCKELGHLENA 540
Query: 541 IKIYNQLPKRENNPNLHITCTMIDIYSIMGRFSEGEKLYLSLRSSGIPLDLIAFSVVVRM 600
IKIY QLPKREN PNLHITCTMIDIYSIMGRFS+GEKLYLSLRSSGIPLDLIA++VVVRM
Sbjct: 541 IKIYTQLPKRENKPNLHITCTMIDIYSIMGRFSDGEKLYLSLRSSGIPLDLIAYNVVVRM 600
Query: 601 YVKAGSLEDACSVIDLMDERQDIVPDIYLLRDMLRIYQRCGMVNKLADLYYRILKRGVSW 660
YVKAGSLEDACSV+DLM E+QDIVPDIYLLRDMLRIYQRCGMV+KLADLYYRILK GVSW
Sbjct: 601 YVKAGSLEDACSVLDLMAEQQDIVPDIYLLRDMLRIYQRCGMVHKLADLYYRILKSGVSW 660
Query: 661 DQEMYNCVINCCSRALPVDELSRIFDEMLHHGFAPNTVTLNVMLDVYGKSKLFTKARNLF 720
DQEMYNCVINCCSRALPVDELSR+FDEML GFAPNTVTLNVMLDVYGKSKLFTKARNLF
Sbjct: 661 DQEMYNCVINCCSRALPVDELSRLFDEMLQCGFAPNTVTLNVMLDVYGKSKLFTKARNLF 720
Query: 721 GLAQKRGWVDAISYNTMISAYGKNKYFKNMSSTVKKMTYNGFSVSLEAYNCMLDAYGKEC 780
GLAQKRG VDAISYNTMIS YGKNK FKNMSSTV+KM +NGFSVSLEAYNCMLDAYGKEC
Sbjct: 721 GLAQKRGLVDAISYNTMISVYGKNKDFKNMSSTVQKMKFNGFSVSLEAYNCMLDAYGKEC 780
Query: 781 QMENFRSVLQEMKDSSSERDHFTYNIMINIYGEQGWINEVSEVLTELKACGLEPDLYSYN 840
QMENFRSVLQ M+++SSE DH+TYNIMINIYGEQGWI+EV+EVLTELKACGLEPDLYSYN
Sbjct: 781 QMENFRSVLQRMQETSSECDHYTYNIMINIYGEQGWIDEVAEVLTELKACGLEPDLYSYN 840
Query: 841 TLIKAYGIAGMVEEAVLLVKEMREKGIEPDRITYINMVKALQRNDQFLEAIKWSLWMKQM 895
TLIKAYGIAGMVEEA LVKEMREK IEPDRITYINM++ALQRNDQFLEA+KWSLWMKQM
Sbjct: 841 TLIKAYGIAGMVEEAAQLVKEMREKRIEPDRITYINMIRALQRNDQFLEAVKWSLWMKQM 894
BLAST of Sed0027468 vs. ExPASy TrEMBL
Match:
A0A6J1E280 (pentatricopeptide repeat-containing protein At4g30825, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111430111 PE=4 SV=1)
HSP 1 Score: 1452.2 bits (3758), Expect = 0.0e+00
Identity = 722/901 (80.13%), Postives = 795/901 (88.24%), Query Frame = 0
Query: 1 MASLKFSFSLHSFDSNKFNFPVKSSLLSDCCSVFSITGYIHLNQSCILYSLARVHKPCWV 60
MASLK SFSL SF S KF+FPV SSLLSDCCSVFSITGYIHLN+S +LYSL R HKP V
Sbjct: 1 MASLKLSFSLDSFHSKKFDFPVNSSLLSDCCSVFSITGYIHLNKSFVLYSLVRAHKPSKV 60
Query: 61 S-------QVRCVVDEIDTRKKCVGSKKSSKRRSGSGSGSNFSFSGNCSEKVFENVVFNG 120
+ +C VDEIDTRKK G KK SKR GS FSFS NCSEKVF+++VF+G
Sbjct: 61 EPETSGGYESKCAVDEIDTRKKYFGGKKPSKR----APGSYFSFSKNCSEKVFDSIVFHG 120
Query: 121 GELDVDYSTISSDLSLDDCNAILKRLEKCNDSKTLVFFEWMRRNGKLEHNVTAYNMVLRV 180
GELDV+YSTISSDLSL+DCNAILKRLEKCND K L FFEWMR N KLEHNV+AYN++LRV
Sbjct: 121 GELDVNYSTISSDLSLEDCNAILKRLEKCNDRKALGFFEWMRINRKLEHNVSAYNLILRV 180
Query: 181 LGRREDWDAAEKLVAEVRPDLGSQFDYQIFNTLIYACYKLGLVERGAKWFRMMLECRVQP 240
LGR++DWDAAEKL+ EVR + Q D+Q+FNTLIYACYK GLVE+GAKWF+MMLE +V P
Sbjct: 181 LGRQQDWDAAEKLIREVRAESSDQLDFQVFNTLIYACYKSGLVEQGAKWFQMMLEWQVLP 240
Query: 241 NVATFGMLMGLYQKGRDTKESEFAFNQMRNLGVVCETAYSSMITIYLRTSLYGKAEDVIR 300
NVATFGMLMGLYQK KE+EFAFNQMRN G+VCETAY+SMITIY R SLY KAE+VIR
Sbjct: 241 NVATFGMLMGLYQKSCSLKEAEFAFNQMRNFGIVCETAYASMITIYTRLSLYDKAEEVIR 300
Query: 301 FMQEDKVTPNLENWLVMLNTYCQQGKMEDAEVVFASMENAGFSSNIIAYNTLITGYGKAS 360
MQEDKVTPN+ENWLVMLN YCQQGKMEDAE+VFASME GFSSNIIAYNTLITGYGKAS
Sbjct: 301 LMQEDKVTPNVENWLVMLNAYCQQGKMEDAELVFASMEEHGFSSNIIAYNTLITGYGKAS 360
Query: 361 NMDAAQRLFLGIKNSGVEPDETTYRSMIEGWGRAGNYKMAEWYYKELTRKGYTPNASNLF 420
NMDAAQRLFL IKNSGVEPDETTYRSMIEGWGRAGNY+MAEWY+KEL RKGY PNASNLF
Sbjct: 361 NMDAAQRLFLSIKNSGVEPDETTYRSMIEGWGRAGNYQMAEWYFKELKRKGYMPNASNLF 420
Query: 421 TLINLQAKHEDEAGALKTVNDMLKIGCRLSAVVGNVLQAYEKARRIQIVPLLLTGPFYRK 480
TL+NLQAKHED+AGALKT+NDMLKIGCRLS++VGNVLQAYEKARRI+ VPLLLTG FYRK
Sbjct: 421 TLMNLQAKHEDDAGALKTLNDMLKIGCRLSSIVGNVLQAYEKARRIKSVPLLLTGSFYRK 480
Query: 481 VLKSQTSCSILAMTYVKHCLVDGALKLLREKEWNDQHFEENLYHLLICSCKDLGHLDNAI 540
VL SQTSCSIL M YVKH LVD ALK+LREKEWND FEENLYHLLICSCK+L HL+NAI
Sbjct: 481 VLASQTSCSILVMAYVKHGLVDDALKVLREKEWNDLRFEENLYHLLICSCKELDHLENAI 540
Query: 541 KIYNQLPKRENNPNLHITCTMIDIYSIMGRFSEGEKLYLSLRSSGIPLDLIAFSVVVRMY 600
KIY QLPK EN PNLHIT TMIDIYSIMGRFS+GEKLYLSL+SSGI LDLIAFSVVVRMY
Sbjct: 541 KIYTQLPKHENKPNLHITSTMIDIYSIMGRFSDGEKLYLSLKSSGIRLDLIAFSVVVRMY 600
Query: 601 VKAGSLEDACSVIDLMDERQDIVPDIYLLRDMLRIYQRCGMVNKLADLYYRILKRGVSWD 660
VKAGSLEDACSV+DLMD++QDIVPDIYL RDMLRIYQRCGMV+KL D+YYRIL VSWD
Sbjct: 601 VKAGSLEDACSVLDLMDKQQDIVPDIYLFRDMLRIYQRCGMVDKLQDVYYRILNSDVSWD 660
Query: 661 QEMYNCVINCCSRALPVDELSRIFDEMLHHGFAPNTVTLNVMLDVYGKSKLFTKARNLFG 720
QEMYNCVINCCSRAL VDELS +FDEML GFAPNTVTLNVMLDVYGKSK F+KAR L
Sbjct: 661 QEMYNCVINCCSRALLVDELSSLFDEMLQRGFAPNTVTLNVMLDVYGKSKHFSKARKLLL 720
Query: 721 LAQKRGWVDAISYNTMISAYGKNKYFKNMSSTVKKMTYNGFSVSLEAYNCMLDAYGKECQ 780
LAQK+G VD ISYNTMISA+GK+K F NMSSTV+ M +NGFS+SLEAYN +LDAYGKE +
Sbjct: 721 LAQKKGLVDVISYNTMISAFGKSKDFANMSSTVRTMEFNGFSLSLEAYNSLLDAYGKEGR 780
Query: 781 MENFRSVLQEMKDSSSERDHFTYNIMINIYGEQGWINEVSEVLTELKACGLEPDLYSYNT 840
M++FR VLQ++KDS+SERD +TYNIMINIYG+QGWI++V EVLTELKACGLEPDLYSYN
Sbjct: 781 MDDFRQVLQQLKDSNSERDQYTYNIMINIYGKQGWIDDVEEVLTELKACGLEPDLYSYNA 840
Query: 841 LIKAYGIAGMVEEAVLLVKEMREKGIEPDRITYINMVKALQRNDQFLEAIKWSLWMKQMK 895
LIKAYGIAGMVEEA LVKEMREK IEPD++T+++M+ ALQRNDQ+LEAIKWSLWMKQM
Sbjct: 841 LIKAYGIAGMVEEAAQLVKEMREKRIEPDKVTFLSMITALQRNDQYLEAIKWSLWMKQMN 897
BLAST of Sed0027468 vs. TAIR 10
Match:
AT4G30825.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 1060.8 bits (2742), Expect = 5.9e-310
Identity = 540/902 (59.87%), Postives = 665/902 (73.73%), Query Frame = 0
Query: 1 MASLKFSFSLHSFDS--NKFNFPVKSSLLSDCCSVFSITGYIHLNQSCILYSLARVHKPC 60
M SL+FS L FDS +F+F S D + +T IH ++ + S RV
Sbjct: 1 MGSLRFSIPLDPFDSKRKRFHFSANPSQFPDQFPIHFVTSSIHATRASSIGSSTRVLDKI 60
Query: 61 WVSQVRCVVDE--IDTRKKCVGSKKSSKRRSGSGSGS------NFSFSGNCSEKVFENVV 120
VS + +E I++ + S + SG G+ FSF ++ EN+
Sbjct: 61 RVSSLGTEANENAINSASAAPVERSRSSKLSGDQRGTKKYVARKFSFRRGSNDLELENLF 120
Query: 121 FNGGELDVDYSTISSDLSLDDCNAILKRLEKCNDSKTLVFFEWMRRNGKLEHNVTAYNMV 180
N GE+DV+YS I SL+ CN ILKRLE C+D+ + FF+WMR NGKL N AY+++
Sbjct: 121 VNNGEIDVNYSAIKPGQSLEHCNGILKRLESCSDTNAIKFFDWMRCNGKLVGNFVAYSLI 180
Query: 181 LRVLGRREDWDAAEKLVAEVRPDLGSQFDYQIFNTLIYACYKLGLVERGAKWFRMMLECR 240
LRVLGRRE+WD AE L+ E+ Q YQ+FNT+IYAC K G V+ +KWF MMLE
Sbjct: 181 LRVLGRREEWDRAEDLIKELCGFHEFQKSYQVFNTVIYACTKKGNVKLASKWFHMMLEFG 240
Query: 241 VQPNVATFGMLMGLYQKGRDTKESEFAFNQMRNLGVVCETAYSSMITIYLRTSLYGKAED 300
V+PNVAT GMLMGLYQK + +E+EFAF+ MR G+VCE+AYSSMITIY R LY KAE+
Sbjct: 241 VRPNVATIGMLMGLYQKNWNVEEAEFAFSHMRKFGIVCESAYSSMITIYTRLRLYDKAEE 300
Query: 301 VIRFMQEDKVTPNLENWLVMLNTYCQQGKMEDAEVVFASMENAGFSSNIIAYNTLITGYG 360
VI M++D+V LENWLVMLN Y QQGKME AE + SME AGFS NIIAYNTLITGYG
Sbjct: 301 VIDLMKQDRVRLKLENWLVMLNAYSQQGKMELAESILVSMEAAGFSPNIIAYNTLITGYG 360
Query: 361 KASNMDAAQRLFLGIKNSGVEPDETTYRSMIEGWGRAGNYKMAEWYYKELTRKGYTPNAS 420
K M+AAQ LF + N G+EPDET+YRSMIEGWGRA NY+ A+ YY+EL R GY PN+
Sbjct: 361 KIFKMEAAQGLFHRLCNIGLEPDETSYRSMIEGWGRADNYEEAKHYYQELKRCGYKPNSF 420
Query: 421 NLFTLINLQAKHEDEAGALKTVNDMLKIGCRLSAVVGNVLQAYEKARRIQIVPLLLTGPF 480
NLFTLINLQAK+ D GA+KT+ DM IGC+ S+++G +LQAYEK +I +VP +L G F
Sbjct: 421 NLFTLINLQAKYGDRDGAIKTIEDMTGIGCQYSSILGIILQAYEKVGKIDVVPCVLKGSF 480
Query: 481 YRKVLKSQTSCSILAMTYVKHCLVDGALKLLREKEWNDQHFEENLYHLLICSCKDLGHLD 540
+ + +QTS S L M YVKH +VD L LLREK+W D FE +LYHLLICSCK+ G L
Sbjct: 481 HNHIRLNQTSFSSLVMAYVKHGMVDDCLGLLREKKWRDSAFESHLYHLLICSCKESGQLT 540
Query: 541 NAIKIYNQLPKRENNPNLHITCTMIDIYSIMGRFSEGEKLYLSLRSSGIPLDLIAFSVVV 600
+A+KIYN + + NLHIT TMIDIY++MG FSE EKLYL+L+SSG+ LD I FS+VV
Sbjct: 541 DAVKIYNHKMESDEEINLHITSTMIDIYTVMGEFSEAEKLYLNLKSSGVVLDRIGFSIVV 600
Query: 601 RMYVKAGSLEDACSVIDLMDERQDIVPDIYLLRDMLRIYQRCGMVNKLADLYYRILKRGV 660
RMYVKAGSLE+ACSV+++MDE++DIVPD+YL RDMLRIYQ+C + +KL LYYRI K G+
Sbjct: 601 RMYVKAGSLEEACSVLEIMDEQKDIVPDVYLFRDMLRIYQKCDLQDKLQHLYYRIRKSGI 660
Query: 661 SWDQEMYNCVINCCSRALPVDELSRIFDEMLHHGFAPNTVTLNVMLDVYGKSKLFTKARN 720
W+QEMYNCVINCC+RALP+DELS F+EM+ +GF PNTVT NV+LDVYGK+KLF K
Sbjct: 661 HWNQEMYNCVINCCARALPLDELSGTFEEMIRYGFTPNTVTFNVLLDVYGKAKLFKKVNE 720
Query: 721 LFGLAQKRGWVDAISYNTMISAYGKNKYFKNMSSTVKKMTYNGFSVSLEAYNCMLDAYGK 780
LF LA++ G VD ISYNT+I+AYGKNK + NMSS +K M ++GFSVSLEAYN +LDAYGK
Sbjct: 721 LFLLAKRHGVVDVISYNTIIAAYGKNKDYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGK 780
Query: 781 ECQMENFRSVLQEMKDSSSERDHFTYNIMINIYGEQGWINEVSEVLTELKACGLEPDLYS 840
+ QME FRS+L+ MK S+S DH+TYNIMINIYGEQGWI+EV++VL ELK GL PDL S
Sbjct: 781 DKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVADVLKELKESGLGPDLCS 840
Query: 841 YNTLIKAYGIAGMVEEAVLLVKEMREKGIEPDRITYINMVKALQRNDQFLEAIKWSLWMK 893
YNTLIKAYGI GMVEEAV LVKEMR + I PD++TY N+V AL+RND+FLEAIKWSLWMK
Sbjct: 841 YNTLIKAYGIGGMVEEAVGLVKEMRGRNIIPDKVTYTNLVTALRRNDEFLEAIKWSLWMK 900
BLAST of Sed0027468 vs. TAIR 10
Match:
AT4G31850.1 (proton gradient regulation 3 )
HSP 1 Score: 197.2 bits (500), Expect = 5.6e-50
Identity = 180/792 (22.73%), Postives = 361/792 (45.58%), Query Frame = 0
Query: 100 NCSEKVFENVVFNGGELD-VDYSTISSDLSLDDCNAILKRLEKCNDSKTL----VFFEWM 159
+C+++VFE + + D V Y T+ L++ +D++ L F+ M
Sbjct: 310 DCAKEVFEKMKTGRHKPDRVTYITL---------------LDRFSDNRDLDSVKQFWSEM 369
Query: 160 RRNGKLEHNVTAYNMVLRVLGRREDWDAAEKLVAEVRPDLGSQFDYQIFNTLIYACYKLG 219
++G + +V + +++ L + ++ A + +V D G + +NTLI ++
Sbjct: 370 EKDGHVP-DVVTFTILVDALCKAGNFGEAFDTL-DVMRDQGILPNLHTYNTLICGLLRVH 429
Query: 220 LVERGAKWFRMMLECRVQPNVATFGMLMGLYQKGRDTKESEFAFNQMRNLGVVCE-TAYS 279
++ + F M V+P T+ + + Y K D+ + F +M+ G+ A +
Sbjct: 430 RLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACN 489
Query: 280 SMITIYLRTSLYGKAEDVIRFMQEDKVTPNLENWLVMLNTYCQQGKMEDAEVVFASMENA 339
+ + + +A+ + +++ + P+ + +M+ Y + G++++A + + M
Sbjct: 490 ASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMEN 549
Query: 340 GFSSNIIAYNTLITGYGKASNMDAAQRLFLGIKNSGVEPDETTYRSMIEGWGRAGNYKMA 399
G ++I N+LI KA +D A ++F+ +K ++P TY +++ G G+ G + A
Sbjct: 550 GCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEA 609
Query: 400 EWYYKELTRKGYTPNASNLFTLINLQAKHEDEAGALKTVNDMLKIGCRLSAVVGNVLQAY 459
++ + +KG PN TL + K+++ ALK + M+ +GC N + +
Sbjct: 610 IELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTI-IF 669
Query: 460 EKARRIQIVPLLLTGPFYRKVLKSQ--TSCSILAMTYVKHCLVDGALKLLREKEWNDQHF 519
+ Q+ + +K++ T C++L VK L++ A K++ +N
Sbjct: 670 GLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLLP-GVVKASLIEDAYKIITNFLYNCADQ 729
Query: 520 EENLY-HLLICSCKDLGHLDNAIKIYNQLPK----RENN----PNLHITCTMIDIYSIMG 579
NL+ LI S +DNA+ +L R+ + P + +C ++
Sbjct: 730 PANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGART 789
Query: 580 RFSEGEKLYLSLRSSGIPLDLIAFSVVVRMYVKAGSLEDACSVIDLMDERQDIVPDIYLL 639
F + K G+ L +++++ ++A +E A V L + +PD+
Sbjct: 790 LFEKFTK------DLGVQPKLPTYNLLIGGLLEADMIEIAQDVF-LQVKSTGCIPDVATY 849
Query: 640 RDMLRIYQRCGMVNKLADLYYRILKRGVSWDQEMYNCVINCCSRALPVDE-LSRIFDEML 699
+L Y + G +++L +LY + + +N VI+ +A VD+ L +D M
Sbjct: 850 NFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMS 909
Query: 700 HHGFAPNTVTLNVMLDVYGKSKLFTKARNLF-GLAQKRGWVDAISYNTMISAYGKNKYFK 759
F+P T ++D KS +A+ LF G+ + YN +I+ +GK
Sbjct: 910 DRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEAD 969
Query: 760 NMSSTVKKMTYNGFSVSLEAYNCMLDAYGKECQMENFRSVLQEMKDSSSERDHFTYNIMI 819
+ K+M G L+ Y+ ++D +++ +E+K+S D YN++I
Sbjct: 970 AACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLII 1029
Query: 820 NIYGEQGWINEVSEVLTELKAC-GLEPDLYSYNTLIKAYGIAGMVEEAVLLVKEMREKGI 872
N G+ + E + E+K G+ PDLY+YN+LI GIAGMVEEA + E++ G+
Sbjct: 1030 NGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGL 1075
BLAST of Sed0027468 vs. TAIR 10
Match:
AT5G02860.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 181.8 bits (460), Expect = 2.4e-45
Identity = 136/599 (22.70%), Postives = 262/599 (43.74%), Query Frame = 0
Query: 294 FMQEDKVTPNLENWLV--MLNTYCQQGKMEDAEVVFASMENAGFSSNIIAYNTLITGYGK 353
FM++ L+N +V +++ ++G++ A +F ++ GFS ++ +Y +LI+ +
Sbjct: 161 FMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFAN 220
Query: 354 ASNMDAAQRLFLGIKNSGVEPDETTYRSMIEGWGRAGN-YKMAEWYYKELTRKGYTPNAS 413
+ A +F ++ G +P TY ++ +G+ G + +++ G P+A
Sbjct: 221 SGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAY 280
Query: 414 NLFTLINLQAKHEDEAGALKTVNDMLKIGCRLSAVVGN-VLQAYEKARRIQIVPLLLTGP 473
TLI + A + +M G V N +L Y K+ R + +L
Sbjct: 281 TYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEM 340
Query: 474 FYRKVLKSQTSCSILAMTYVKHCLVDGALKLLREKEWNDQHFEENLYHLLICSCKDLGHL 533
S + + L Y + ++D A++L + + Y L+ + G +
Sbjct: 341 VLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKV 400
Query: 534 DNAIKIYNQLPKRENNPNLHITCTMIDIYSIMGRFSEGEKLYLSLRSSGIPLDLIAFSVV 593
++A+ I+ ++ PN+ I +Y G+F+E K++ + G+ D++ ++ +
Sbjct: 401 ESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTL 460
Query: 594 VRMYVKAGSLEDACSVIDLMDERQDIVPDIYLLRDMLRIYQRCGMVNKLADLYYRILKRG 653
+ ++ + G + V M +R VP+ ++ Y RCG + +Y R+L G
Sbjct: 461 LAVFGQNGMDSEVSGVFKEM-KRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAG 520
Query: 654 VSWDQEMYNCVINCCSRALPVDELSRIFDEMLHHGFAPNTVTLNVMLDVYGKSK----LF 713
V+ D YN V+ +R ++ ++ EM PN +T +L Y K +
Sbjct: 521 VTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMH 580
Query: 714 TKARNLF-GLAQKRGWVDAISYNTMISAYGKNKYFKNMSSTVKKMTYNGFSVSLEAYNCM 773
+ A ++ G+ + R A+ T++ K ++ GFS + N M
Sbjct: 581 SLAEEVYSGVIEPR----AVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSM 640
Query: 774 LDAYGKECQMENFRSVLQEMKDSSSERDHFTYNIMINIYGEQGWINEVSEVLTELKACGL 833
+ YG+ + VL MK+ TYN ++ ++ + E+L E+ A G+
Sbjct: 641 VSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGI 700
Query: 834 EPDLYSYNTLIKAYGIAGMVEEAVLLVKEMREKGIEPDRITYINMVKALQRNDQFLEAI 884
+PD+ SYNT+I AY + +A + EMR GI PD ITY + + + F EAI
Sbjct: 701 KPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAI 754
BLAST of Sed0027468 vs. TAIR 10
Match:
AT4G19440.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 175.3 bits (443), Expect = 2.3e-43
Identity = 144/591 (24.37%), Postives = 260/591 (43.99%), Query Frame = 0
Query: 300 VTPNLENWLVMLNTYCQQGKMEDAEVVFASMENAGFSSNIIAYNTLITGYGKASNMDAAQ 359
V+P++ + +N +C+ GK+E+A +F+ ME AG + N++ +NT+I G G D A
Sbjct: 256 VSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAF 315
Query: 360 RLFLGIKNSGVEPDETTYRSMIEGWGRAGNYKMAEWYYKELTRKGYTPNASNLFTLINLQ 419
+ G+EP TY +++G RA A + KE+T+KG+ PN LI+
Sbjct: 316 MFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSF 375
Query: 420 AKHEDEAGALKTVNDMLKIGCRLSAVVGNVLQAYEKARRIQIVPLLLTGPFYRKVLKSQT 479
EAG+L +A E + L LT Y ++K
Sbjct: 376 I----EAGSLN--------------------KAIEIKDLMVSKGLSLTSSTYNTLIKG-- 435
Query: 480 SCSILAMTYVKHCLVDGALKLLREKEWNDQHFEENLYHLLICSCKDLGHLDNAIKIYNQL 539
Y K+ D A +LL+E + + + +IC D+A++ ++
Sbjct: 436 --------YCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEM 495
Query: 540 PKRENNPNLHITCTMIDIYSIMGRFSEGEKLYLSLRSSGIPLDLIAFSVVVRMYVKAGSL 599
R +P + T+I G+ S+ +L+ + G +D + ++ +AG L
Sbjct: 496 LLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKL 555
Query: 600 EDACSVIDLMDERQDIVPDIYLLRDMLRIYQRCGMVNKLADLYY---RILKRGVSWDQEM 659
++A + + R ++ + + C KL + + ++KRG+ D
Sbjct: 556 DEAFRIQKEILGRGCVMDRV----SYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYT 615
Query: 660 YNCVINCCSRALPVDELSRIFDEMLHHGFAPNTVTLNVMLDVYGKSKLFTKARNLFG-LA 719
Y+ +I V+E + +D+ +G P+ T +VM+D K++ + + F +
Sbjct: 616 YSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMM 675
Query: 720 QKRGWVDAISYNTMISAYGKNKYFKNMSSTVKKMTYNGFSVSLEAYNCMLDAYGKECQME 779
K + + YN +I AY ++ + M + G S + Y ++ ++E
Sbjct: 676 SKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVE 735
Query: 780 NFRSVLQEMKDSSSERDHFTYNIMINIYGEQGWINEVSEVLTELKACGLEPDLYSYNTLI 839
+ + +EM+ E + F Y +I+ YG+ G + +V +L E+ + + P+ +Y +I
Sbjct: 736 EAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMI 795
Query: 840 KAYGIAGMVEEAVLLVKEMREKGIEPDRITYINMVKALQRNDQFLEAIKWS 887
Y G V EA L+ EMREKGI PD ITY + + LEA K S
Sbjct: 796 GGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGS 808
BLAST of Sed0027468 vs. TAIR 10
Match:
AT4G19440.2 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 175.3 bits (443), Expect = 2.3e-43
Identity = 144/591 (24.37%), Postives = 260/591 (43.99%), Query Frame = 0
Query: 300 VTPNLENWLVMLNTYCQQGKMEDAEVVFASMENAGFSSNIIAYNTLITGYGKASNMDAAQ 359
V+P++ + +N +C+ GK+E+A +F+ ME AG + N++ +NT+I G G D A
Sbjct: 256 VSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAF 315
Query: 360 RLFLGIKNSGVEPDETTYRSMIEGWGRAGNYKMAEWYYKELTRKGYTPNASNLFTLINLQ 419
+ G+EP TY +++G RA A + KE+T+KG+ PN LI+
Sbjct: 316 MFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSF 375
Query: 420 AKHEDEAGALKTVNDMLKIGCRLSAVVGNVLQAYEKARRIQIVPLLLTGPFYRKVLKSQT 479
EAG+L +A E + L LT Y ++K
Sbjct: 376 I----EAGSLN--------------------KAIEIKDLMVSKGLSLTSSTYNTLIKG-- 435
Query: 480 SCSILAMTYVKHCLVDGALKLLREKEWNDQHFEENLYHLLICSCKDLGHLDNAIKIYNQL 539
Y K+ D A +LL+E + + + +IC D+A++ ++
Sbjct: 436 --------YCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEM 495
Query: 540 PKRENNPNLHITCTMIDIYSIMGRFSEGEKLYLSLRSSGIPLDLIAFSVVVRMYVKAGSL 599
R +P + T+I G+ S+ +L+ + G +D + ++ +AG L
Sbjct: 496 LLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKL 555
Query: 600 EDACSVIDLMDERQDIVPDIYLLRDMLRIYQRCGMVNKLADLYY---RILKRGVSWDQEM 659
++A + + R ++ + + C KL + + ++KRG+ D
Sbjct: 556 DEAFRIQKEILGRGCVMDRV----SYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYT 615
Query: 660 YNCVINCCSRALPVDELSRIFDEMLHHGFAPNTVTLNVMLDVYGKSKLFTKARNLFG-LA 719
Y+ +I V+E + +D+ +G P+ T +VM+D K++ + + F +
Sbjct: 616 YSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMM 675
Query: 720 QKRGWVDAISYNTMISAYGKNKYFKNMSSTVKKMTYNGFSVSLEAYNCMLDAYGKECQME 779
K + + YN +I AY ++ + M + G S + Y ++ ++E
Sbjct: 676 SKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVE 735
Query: 780 NFRSVLQEMKDSSSERDHFTYNIMINIYGEQGWINEVSEVLTELKACGLEPDLYSYNTLI 839
+ + +EM+ E + F Y +I+ YG+ G + +V +L E+ + + P+ +Y +I
Sbjct: 736 EAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMI 795
Query: 840 KAYGIAGMVEEAVLLVKEMREKGIEPDRITYINMVKALQRNDQFLEAIKWS 887
Y G V EA L+ EMREKGI PD ITY + + LEA K S
Sbjct: 796 GGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGS 808
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022135004.1 | 0.0e+00 | 84.73 | pentatricopeptide repeat-containing protein At4g30825, chloroplastic isoform X1 ... | [more] |
XP_038879369.1 | 0.0e+00 | 84.62 | pentatricopeptide repeat-containing protein At4g30825, chloroplastic [Benincasa ... | [more] |
XP_016899838.1 | 0.0e+00 | 84.04 | PREDICTED: pentatricopeptide repeat-containing protein At4g30825, chloroplastic ... | [more] |
XP_004146719.1 | 0.0e+00 | 83.70 | pentatricopeptide repeat-containing protein At4g30825, chloroplastic [Cucumis sa... | [more] |
XP_023516176.1 | 0.0e+00 | 80.36 | pentatricopeptide repeat-containing protein At4g30825, chloroplastic [Cucurbita ... | [more] |
Match Name | E-value | Identity | Description | |
O65567 | 8.3e-309 | 59.87 | Pentatricopeptide repeat-containing protein At4g30825, chloroplastic OS=Arabidop... | [more] |
Q9SZ52 | 7.9e-49 | 22.73 | Pentatricopeptide repeat-containing protein At4g31850, chloroplastic OS=Arabidop... | [more] |
B8Y6I0 | 6.9e-45 | 20.17 | Pentatricopeptide repeat-containing protein 10, chloroplastic OS=Zea mays OX=457... | [more] |
Q9LYZ9 | 3.4e-44 | 22.70 | Pentatricopeptide repeat-containing protein At5g02860 OS=Arabidopsis thaliana OX... | [more] |
Q940A6 | 3.2e-42 | 24.37 | Pentatricopeptide repeat-containing protein At4g19440, chloroplastic OS=Arabidop... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1BZD7 | 0.0e+00 | 84.73 | pentatricopeptide repeat-containing protein At4g30825, chloroplastic isoform X1 ... | [more] |
A0A5A7SYW6 | 0.0e+00 | 84.04 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
A0A1S4DV41 | 0.0e+00 | 84.04 | pentatricopeptide repeat-containing protein At4g30825, chloroplastic OS=Cucumis ... | [more] |
A0A0A0LTR9 | 0.0e+00 | 83.70 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G257890 PE=4 SV=1 | [more] |
A0A6J1E280 | 0.0e+00 | 80.13 | pentatricopeptide repeat-containing protein At4g30825, chloroplastic OS=Cucurbit... | [more] |
Match Name | E-value | Identity | Description | |
AT4G30825.1 | 5.9e-310 | 59.87 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT4G31850.1 | 5.6e-50 | 22.73 | proton gradient regulation 3 | [more] |
AT5G02860.1 | 2.4e-45 | 22.70 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT4G19440.1 | 2.3e-43 | 24.37 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT4G19440.2 | 2.3e-43 | 24.37 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |