Sed0027459 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCGTCGCCAACGCCGTTCACCGCCGCCTCCAATATGCTCCGCCACCGCCTCCTCCCTTCTCTCCGGACTCGCGGCGGCGCCGCCGCAGGCCCGAGCCGGTGGACCAGTCCCGGCCACGAGGAGCGTCCCAAGGGCTACCTCTTCAATCGCACGCCGCCTCCACCAGGTCAGTCCCGTAAATGGGAGGATTGGGAGCTTCCTTGTTATATCACCAGCTTTCTCACCATCGTCATCCTCGGCGTTGGCCTCAACGCCAAGCCCGATCTCACCATCGAGACTTGGGCTCACCAGAAAGCCCTAGAGCGCCTCGAGATGGAGAATCTGGCTTTGTCCGACTCCGGATCATCGGAATCCGATTGA ATGCCGTCGCCAACGCCGTTCACCGCCGCCTCCAATATGCTCCGCCACCGCCTCCTCCCTTCTCTCCGGACTCGCGGCGGCGCCGCCGCAGGCCCGAGCCGGTGGACCAGTCCCGGCCACGAGGAGCGTCCCAAGGGCTACCTCTTCAATCGCACGCCGCCTCCACCAGGTCAGTCCCGTAAATGGGAGGATTGGGAGCTTCCTTGTTATATCACCAGCTTTCTCACCATCGTCATCCTCGGCGTTGGCCTCAACGCCAAGCCCGATCTCACCATCGAGACTTGGGCTCACCAGAAAGCCCTAGAGCGCCTCGAGATGGAGAATCTGGCTTTGTCCGACTCCGGATCATCGGAATCCGATTGA ATGCCGTCGCCAACGCCGTTCACCGCCGCCTCCAATATGCTCCGCCACCGCCTCCTCCCTTCTCTCCGGACTCGCGGCGGCGCCGCCGCAGGCCCGAGCCGGTGGACCAGTCCCGGCCACGAGGAGCGTCCCAAGGGCTACCTCTTCAATCGCACGCCGCCTCCACCAGGTCAGTCCCGTAAATGGGAGGATTGGGAGCTTCCTTGTTATATCACCAGCTTTCTCACCATCGTCATCCTCGGCGTTGGCCTCAACGCCAAGCCCGATCTCACCATCGAGACTTGGGCTCACCAGAAAGCCCTAGAGCGCCTCGAGATGGAGAATCTGGCTTTGTCCGACTCCGGATCATCGGAATCCGATTGA MPSPTPFTAASNMLRHRLLPSLRTRGGAAAGPSRWTSPGHEERPKGYLFNRTPPPPGQSRKWEDWELPCYITSFLTIVILGVGLNAKPDLTIETWAHQKALERLEMENLALSDSGSSESD Homology
BLAST of Sed0027459 vs. NCBI nr
Match: XP_023517134.1 (uncharacterized protein LOC111780983 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 238.8 bits (608), Expect = 2.4e-59 Identity = 113/120 (94.17%), Postives = 115/120 (95.83%), Query Frame = 0
BLAST of Sed0027459 vs. NCBI nr
Match: XP_022925065.1 (uncharacterized protein LOC111432424 [Cucurbita moschata] >KAG6595653.1 hypothetical protein SDJN03_12206, partial [Cucurbita argyrosperma subsp. sororia] >KAG7027613.1 hypothetical protein SDJN02_11627, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 238.0 bits (606), Expect = 4.1e-59 Identity = 112/120 (93.33%), Postives = 115/120 (95.83%), Query Frame = 0
BLAST of Sed0027459 vs. NCBI nr
Match: XP_022966491.1 (uncharacterized protein LOC111466129 [Cucurbita maxima]) HSP 1 Score: 237.7 bits (605), Expect = 5.4e-59 Identity = 112/120 (93.33%), Postives = 115/120 (95.83%), Query Frame = 0
BLAST of Sed0027459 vs. NCBI nr
Match: XP_022151653.1 (uncharacterized protein LOC111019565 [Momordica charantia]) HSP 1 Score: 236.9 bits (603), Expect = 9.2e-59 Identity = 112/120 (93.33%), Postives = 115/120 (95.83%), Query Frame = 0
BLAST of Sed0027459 vs. NCBI nr
Match: XP_038881129.1 (uncharacterized protein LOC120072731 [Benincasa hispida]) HSP 1 Score: 236.5 bits (602), Expect = 1.2e-58 Identity = 112/120 (93.33%), Postives = 115/120 (95.83%), Query Frame = 0
BLAST of Sed0027459 vs. ExPASy TrEMBL
Match: A0A6J1EGU8 (uncharacterized protein LOC111432424 OS=Cucurbita moschata OX=3662 GN=LOC111432424 PE=4 SV=1) HSP 1 Score: 238.0 bits (606), Expect = 2.0e-59 Identity = 112/120 (93.33%), Postives = 115/120 (95.83%), Query Frame = 0
BLAST of Sed0027459 vs. ExPASy TrEMBL
Match: A0A6J1HPH2 (uncharacterized protein LOC111466129 OS=Cucurbita maxima OX=3661 GN=LOC111466129 PE=4 SV=1) HSP 1 Score: 237.7 bits (605), Expect = 2.6e-59 Identity = 112/120 (93.33%), Postives = 115/120 (95.83%), Query Frame = 0
BLAST of Sed0027459 vs. ExPASy TrEMBL
Match: A0A6J1DCT8 (uncharacterized protein LOC111019565 OS=Momordica charantia OX=3673 GN=LOC111019565 PE=4 SV=1) HSP 1 Score: 236.9 bits (603), Expect = 4.4e-59 Identity = 112/120 (93.33%), Postives = 115/120 (95.83%), Query Frame = 0
BLAST of Sed0027459 vs. ExPASy TrEMBL
Match: I3NMS3 (Uncharacterized protein OS=Hevea brasiliensis OX=3981 PE=2 SV=1) HSP 1 Score: 219.2 bits (557), Expect = 9.6e-54 Identity = 105/118 (88.98%), Postives = 107/118 (90.68%), Query Frame = 0
BLAST of Sed0027459 vs. ExPASy TrEMBL
Match: A0A067KZT1 (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_06813 PE=4 SV=1) HSP 1 Score: 217.6 bits (553), Expect = 2.8e-53 Identity = 105/118 (88.98%), Postives = 105/118 (88.98%), Query Frame = 0
BLAST of Sed0027459 vs. TAIR 10
Match: AT2G42310.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G57785.1); Has 115 Blast hits to 115 proteins in 48 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 44; Plants - 67; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 175.3 bits (443), Expect = 3.0e-44 Identity = 84/116 (72.41%), Postives = 91/116 (78.45%), Query Frame = 0
BLAST of Sed0027459 vs. TAIR 10
Match: AT3G57785.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G42310.1); Has 121 Blast hits to 121 proteins in 51 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 48; Plants - 67; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). ) HSP 1 Score: 172.9 bits (437), Expect = 1.5e-43 Identity = 84/116 (72.41%), Postives = 92/116 (79.31%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
|