Sed0027287 (gene) Chayote v1

Overview


Name	Sed0027287
Type	gene
Organism	Sechium edule (Chayote v1)
Description	CASP-like protein
Location	LG08: 39649995 .. 39651954 (-)
RNA-Seq Expression	Sed0027287
Synteny	Sed0027287

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCTTTAGAGTCTGAAGCAGCAAAAACAGATGTTGTTGGTGAATACAACCAATTGGCAGTGGCAAAAAAGAGTAAATGGGAATGTGGGTTTGTTTTGGTGAGGCTTGTGGCTTCTTTAGCCACTGCCTCAGCCACCCTTGTAATGGCTCTTAACAAAGAGTTTAAATCTGTTGTTGTTGCCACCATTGGAACTGACCCAGTTACTGCCATTGTTGCTGCTCGCTTTCACCACACTCCTGCTTTTGTGTAAGCTCCTTTCAATATTTTTTATGTGTCTCGATTAGCTTGCGTACGTATCGACTAATGTCATGGGATATATTACCTGAACTTATAACATTTGCATGTCAAAGAAGACCGTAGGAAATTCATTTCTAGATAGATAGGTGGTCATCACCGATTGAAGTCGACCCTCTTGACTATTAAGTCACTCTTTGATAGCTCTTCAAAATCAATATGAAGAAACGTGTGATCTCATATTGATCATCAGCATGTCCTTTAATAGATGTCTCTTTTTTAGTCCAATAACAATGGTTAGGGATTGAAATTTAATTCAACTTCATATTCGCGAGTTGATAATAAAAATTAGTATTTGGCTCGTATTTTATTTGTGAGTCGTAGTACCTTATATGTAGGATTTGTGGGTTCCTTCCATAATTTGAAGTATAAAAAAATTGATATTTAAAAATGGAAGGATTTGAAAAAATGTCAAATTACCACTAAACTAAACTGTTGCAGGTTGGTACTAGTGATCATAAAGGATATTAAGAATTAAGAGGTTAAGAACTATAATTTTTTTTTTTTTTTCTATTTAACAACACTTTCCAAGAGGATTCGAACCCAAAATGTCACTAGATAGAAAACAGTGTGTTAAATTTAATTACCATCAAACAATAAAACAAACATGCCACCAACACTTAATTTGTCCTTAGAAGCATTTGAAATCAATTTTCATTGTTATTAACTTAAAAAAGAAGAAATTATCATGCCAAAATGAAACAAATCAAATTTGTATTTTAACCAATGTAAAATGAAAAAGGAAAATTTACAATCATCGGACATCGATCAATTCCAATCAATTTTTTTAGCACAGTCGGGAAATCGGGATTACACATATCGATTTCATGATTGAATCTGTGACTGTGGAAGAAATGGATTAACCCCAAAGCCTAATAAATTGCGTCACCAAATGGTCAGTTCCGATCCAAAATCATACAACTGAGTAACTATAAGTAAATTATTCATAATATGTGCCGTAGAAAATTGAACTTTCTAACCTCAATGTAAGATTACAAATACGGATTTCAGGATTTGAATTTGTGACCGTGGAAGAAATAGATTAACAACAGACCATACTAATTGCGCCATCGATCCATTCGGTGATCAATTCCAATCCAAGATCATACAACTGAGTAACTATAAGAAATTATTCATAATATGTGCCGTAGAAAATTGAACTTTCTAACCTCAATGTCGAAAAAGCTTAATGCCATAATTTCAATATGCAATTTGTTGCAGATTCTTCGTGGTAGCAAATGGAATAGCCACACTACACAACTGGATAATGATAGCCCTAACCATCTTCGGACCAAATCTACATTTCCATGGCTTCCGCCTTCCAATCATCGCCATTTTAGACATGGTAAAATACTACTAAACTCACCTCCAAATCTTCCTCTCTCTTTTGATCAATCAAATCTCAAATTCCGCGGCAGGCGACGGCGGCGCTTGCATCTGCGGGCGACGGCGCGGCGGTGTTCATGGCGGCGCTCGGAAAACACGGCAACACGCACGCGAGATGGAACCAGATCTGCGACAAATTCCCCACCTACTGCGACCGTGGCGCCGGCGCGCTGGTCGCTTCCTTCGTCGGCCTCTGCCTTCTTCTTCTCGTCGCCGCCGTCTCCATTGTCAAGCTGATGAAGCTCAACCCCAGCCGCTCCTTTGCTGCGCCATAG

mRNA sequence

ATGGCTTCTTTAGAGTCTGAAGCAGCAAAAACAGATGTTGTTGGTGAATACAACCAATTGGCAGTGGCAAAAAAGAGTAAATGGGAATGTGGGTTTGTTTTGGTGAGGCTTGTGGCTTCTTTAGCCACTGCCTCAGCCACCCTTGTAATGGCTCTTAACAAAGAGTTTAAATCTGTTGTTGTTGCCACCATTGGAACTGACCCAGTTACTGCCATTGTTGCTGCTCGCTTTCACCACACTCCTGCTTTTGTATTCTTCGTGGTAGCAAATGGAATAGCCACACTACACAACTGGATAATGATAGCCCTAACCATCTTCGGACCAAATCTACATTTCCATGGCTTCCGCCTTCCAATCATCGCCATTTTAGACATGGCGACGGCGGCGCTTGCATCTGCGGGCGACGGCGCGGCGGTGTTCATGGCGGCGCTCGGAAAACACGGCAACACGCACGCGAGATGGAACCAGATCTGCGACAAATTCCCCACCTACTGCGACCGTGGCGCCGGCGCGCTGGTCGCTTCCTTCGTCGGCCTCTGCCTTCTTCTTCTCGTCGCCGCCGTCTCCATTGTCAAGCTGATGAAGCTCAACCCCAGCCGCTCCTTTGCTGCGCCATAG

Coding sequence (CDS)

ATGGCTTCTTTAGAGTCTGAAGCAGCAAAAACAGATGTTGTTGGTGAATACAACCAATTGGCAGTGGCAAAAAAGAGTAAATGGGAATGTGGGTTTGTTTTGGTGAGGCTTGTGGCTTCTTTAGCCACTGCCTCAGCCACCCTTGTAATGGCTCTTAACAAAGAGTTTAAATCTGTTGTTGTTGCCACCATTGGAACTGACCCAGTTACTGCCATTGTTGCTGCTCGCTTTCACCACACTCCTGCTTTTGTATTCTTCGTGGTAGCAAATGGAATAGCCACACTACACAACTGGATAATGATAGCCCTAACCATCTTCGGACCAAATCTACATTTCCATGGCTTCCGCCTTCCAATCATCGCCATTTTAGACATGGCGACGGCGGCGCTTGCATCTGCGGGCGACGGCGCGGCGGTGTTCATGGCGGCGCTCGGAAAACACGGCAACACGCACGCGAGATGGAACCAGATCTGCGACAAATTCCCCACCTACTGCGACCGTGGCGCCGGCGCGCTGGTCGCTTCCTTCGTCGGCCTCTGCCTTCTTCTTCTCGTCGCCGCCGTCTCCATTGTCAAGCTGATGAAGCTCAACCCCAGCCGCTCCTTTGCTGCGCCATAG

Protein sequence

MASLESEAAKTDVVGEYNQLAVAKKSKWECGFVLVRLVASLATASATLVMALNKEFKSVVVATIGTDPVTAIVAARFHHTPAFVFFVVANGIATLHNWIMIALTIFGPNLHFHGFRLPIIAILDMATAALASAGDGAAVFMAALGKHGNTHARWNQICDKFPTYCDRGAGALVASFVGLCLLLLVAAVSIVKLMKLNPSRSFAAP

Homology

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BLAST of Sed0027287 vs. NCBI nr
Match: XP_022142567.1 (CASP-like protein 1B2 [Momordica charantia])

HSP 1 Score: 293.1 bits (749), Expect = 1.8e-75
Identity = 160/211 (75.83%), Postives = 176/211 (83.41%), Query Frame = 0


Query: 4   LESEAA-KTDVVGEYN--------QLAVAKKSKWECGFVLVRLVASLATASATLVMALNK 63
           + SEAA K+D  GEYN          A A+ S+W  G V VRLVAS ATASATLVMALNK
Sbjct: 1   MASEAAVKSDGGGEYNVHVHDVAAARAKARNSRW--GLVAVRLVASFATASATLVMALNK 60

Query: 64  EFKSVVVATIGTDPVTAIVAARFHHTPAFVFFVVANGIATLHNWIMIALTIFGPNLHFHG 123
           E KSVVVATIGT P+TA VAARFHHTPAFVFFV+ANG+ATLHNWIMIAL IFGPNLHFHG
Sbjct: 61  ETKSVVVATIGTAPLTATVAARFHHTPAFVFFVIANGMATLHNWIMIALDIFGPNLHFHG 120

Query: 124 FRLPIIAILDMATAALASAGDGAAVFMAALGKHGNTHARWNQICDKFPTYCDRGAGALVA 183
           FRLPIIAILDMAT ALASAGDGAA FMAALGK+GN HARWN+ICDKF TYCD GAGAL+A
Sbjct: 121 FRLPIIAILDMATVALASAGDGAATFMAALGKNGNKHARWNKICDKFSTYCDHGAGALIA 180

Query: 184 SFVGLCLLLLVAAVSIVKLMKLNPSRSFAAP 206
           SFVGLCLLLL+  +SIVK++K  P+ SFA+P
Sbjct: 181 SFVGLCLLLLIDVISIVKVLKHKPNNSFASP 209

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BLAST of Sed0027287 vs. NCBI nr
Match: XP_023519194.1 (CASP-like protein 1B2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 289.7 bits (740), Expect = 2.0e-74
Identity = 153/207 (73.91%), Postives = 172/207 (83.09%), Query Frame = 0


Query: 1   MASLESEAAKTDVVGEYNQLAVAK--KSKWECGFVLVRLVASLATASATLVMALNKEFKS 60
           MASL++EAA    VGEYN LAVA     KW  GFVLVRLVAS AT SATLVMALNKE KS
Sbjct: 1   MASLQTEAAAKAEVGEYNHLAVASPPTRKWRWGFVLVRLVASFATVSATLVMALNKESKS 60

Query: 61  VVVATIGTDPVTAIVAARFHHTPAFVFFVVANGIATLHNWIMIALTIFGPNLHFHGFRLP 120
           VVVAT+GT P+TA ++ARF HTPAF+FFVVANG+ATLHNW+MIAL IFGP+  FHGFRLP
Sbjct: 61  VVVATVGTAPLTATISARFQHTPAFIFFVVANGVATLHNWLMIALDIFGPDYRFHGFRLP 120

Query: 121 IIAILDMATAALASAGDGAAVFMAALGKHGNTHARWNQICDKFPTYCDRGAGALVASFVG 180
            IAILDM T ALASAGDGAA FMAALGK+GN HARWN+ICDKF  YCD GAGAL+ASFVG
Sbjct: 121 TIAILDMTTVALASAGDGAATFMAALGKNGNKHARWNKICDKFSAYCDHGAGALIASFVG 180

Query: 181 LCLLLLVAAVSIVKLMKLNPSRSFAAP 206
           LCLLLL++A+SI+KL+   P  S A+P
Sbjct: 181 LCLLLLISAISIIKLLH-KPRPSIASP 206

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BLAST of Sed0027287 vs. NCBI nr
Match: KAG6583816.1 (CASP-like protein 1B2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 288.1 bits (736), Expect = 5.9e-74
Identity = 154/210 (73.33%), Postives = 174/210 (82.86%), Query Frame = 0


Query: 1   MASLESEAAKTDV---VGEYNQLAVAK--KSKWECGFVLVRLVASLATASATLVMALNKE 60
           MASL+SEAA       VGEYN LAVA     KW  G VLVRLVAS ATASATLVMALNKE
Sbjct: 66  MASLQSEAAAAAAKAEVGEYNHLAVASPPTRKWRWGLVLVRLVASFATASATLVMALNKE 125

Query: 61  FKSVVVATIGTDPVTAIVAARFHHTPAFVFFVVANGIATLHNWIMIALTIFGPNLHFHGF 120
            KSVVVAT+GT P+TA ++ARF HTPAF+FFVVANG+ATLHNW+MIAL IFGP+  FHGF
Sbjct: 126 SKSVVVATVGTAPLTATISARFQHTPAFIFFVVANGVATLHNWLMIALDIFGPDYRFHGF 185

Query: 121 RLPIIAILDMATAALASAGDGAAVFMAALGKHGNTHARWNQICDKFPTYCDRGAGALVAS 180
           RLPI+AILDM T ALASAGDGAA FMAALGK+GN HARWN+ICDKF TYCD GAGAL+AS
Sbjct: 186 RLPIVAILDMTTVALASAGDGAATFMAALGKNGNKHARWNKICDKFSTYCDHGAGALIAS 245

Query: 181 FVGLCLLLLVAAVSIVKLMKLNPSRSFAAP 206
           FVGLCLLLL++++SI+KL+   P  S A+P
Sbjct: 246 FVGLCLLLLISSISIIKLLH-KPRPSIASP 274

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BLAST of Sed0027287 vs. NCBI nr
Match: XP_008459066.1 (PREDICTED: CASP-like protein 1B2 [Cucumis melo] >XP_008459067.1 PREDICTED: CASP-like protein 1B2 [Cucumis melo] >KAA0043260.1 CASP-like protein 1B2 [Cucumis melo var. makuwa] >TYK29324.1 CASP-like protein 1B2 [Cucumis melo var. makuwa])

HSP 1 Score: 287.3 bits (734), Expect = 1.0e-73
Identity = 152/210 (72.38%), Postives = 176/210 (83.81%), Query Frame = 0


Query: 1   MASLESEAAKTDV-----VGEYNQLAVAKKSKWECGFVLVRLVASLATASATLVMALNKE 60
           MASL SE A T +     VGEYN LA+ KK  W  GF+L+RLVAS ATASATLVMALNKE
Sbjct: 1   MASLPSETAATTIVKANDVGEYNHLAMEKKRNW--GFILLRLVASFATASATLVMALNKE 60

Query: 61  FKSVVVATIGTDPVTAIVAARFHHTPAFVFFVVANGIATLHNWIMIALTIFGPNLHFHGF 120
            KS+VVATIGTDP+TA ++A F+HTPAF+FFVVANG+ATLHNW+MIAL IFGP  HF+GF
Sbjct: 61  TKSIVVATIGTDPLTATLSAHFYHTPAFIFFVVANGMATLHNWMMIALHIFGPKFHFNGF 120

Query: 121 RLPIIAILDMATAALASAGDGAAVFMAALGKHGNTHARWNQICDKFPTYCDRGAGALVAS 180
           RLPII+ILDM T ALASAGDGAA FMAALGK+GN HARWN+ICDKF TYCD GAGAL+AS
Sbjct: 121 RLPIISILDMTTVALASAGDGAATFMAALGKNGNKHARWNKICDKFSTYCDHGAGALIAS 180

Query: 181 FVGLCLLLLVAAVSIVKLMKLNPSRSFAAP 206
           FVGLCLLLL++A+SI+K +    + SFA+P
Sbjct: 181 FVGLCLLLLISAISIIKPLH-KSNNSFASP 207

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BLAST of Sed0027287 vs. NCBI nr
Match: XP_022927401.1 (CASP-like protein 1B2 [Cucurbita moschata])

HSP 1 Score: 286.2 bits (731), Expect = 2.2e-73
Identity = 154/211 (72.99%), Postives = 173/211 (81.99%), Query Frame = 0


Query: 1   MASLESEAAKTDV----VGEYNQLAVAK--KSKWECGFVLVRLVASLATASATLVMALNK 60
           MASL+SEAA        VGEYN LAVA     KW  G VLVRLVAS ATASATLVMALNK
Sbjct: 1   MASLQSEAAAAAAAKAEVGEYNHLAVASPPTRKWRWGLVLVRLVASFATASATLVMALNK 60

Query: 61  EFKSVVVATIGTDPVTAIVAARFHHTPAFVFFVVANGIATLHNWIMIALTIFGPNLHFHG 120
           E KSVVVAT+GT P+TA ++ARF HTPAF+FFVVANG+ATLHNW+MIAL IFGP+  FHG
Sbjct: 61  ESKSVVVATVGTAPLTATISARFQHTPAFIFFVVANGVATLHNWLMIALDIFGPDYRFHG 120

Query: 121 FRLPIIAILDMATAALASAGDGAAVFMAALGKHGNTHARWNQICDKFPTYCDRGAGALVA 180
           FRLPIIAILDM T ALASAGDGAA FMAALGK+GN HARWN+ICDKF  YCD GAGAL+A
Sbjct: 121 FRLPIIAILDMTTVALASAGDGAATFMAALGKNGNKHARWNKICDKFSAYCDHGAGALIA 180

Query: 181 SFVGLCLLLLVAAVSIVKLMKLNPSRSFAAP 206
           SFVGLCLLLL++++SI+KL+   P  S A+P
Sbjct: 181 SFVGLCLLLLISSISIIKLLH-KPRPSIASP 210

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BLAST of Sed0027287 vs. ExPASy Swiss-Prot
Match: B9GIE4 (CASP-like protein 1B2 OS=Populus trichocarpa OX=3694 GN=POPTRDRAFT_798217 PE=3 SV=3)

HSP 1 Score: 197.6 bits (501), Expect = 1.4e-49
Identity = 102/183 (55.74%), Postives = 137/183 (74.86%), Query Frame = 0


Query: 24  KKSKWECGFVLVRLVASLATASATLVMALNKEFKSVVVATIGTDPVTAIVAARFHHTPAF 83
           K  KW    +++R++A  ATA+AT+VM LNKE K++VVAT+G+ P+ A +AA+F HTPAF
Sbjct: 19  KTRKWV--LLMLRVLAFFATAAATVVMGLNKETKTLVVATVGSTPIKASLAAKFQHTPAF 78

Query: 84  VFFVVANGIATLHNWIMIALTIFGPNLHFHGFRLPIIAILDMATAALASAGDGAAVFMAA 143
           VFFV+ANG+A++HN +MI   +FG  L + G RL +IAILDM T AL S G  AA FMA 
Sbjct: 79  VFFVIANGLASIHNLVMIMGDLFGQKLDYKGLRLAMIAILDMMTVALVSGGVSAAAFMAE 138

Query: 144 LGKHGNTHARWNQICDKFPTYCDRGAGALVASFVGLCLLLLVAAVSIVKLM-KLNPSRSF 203
           LGK+GN+HARWN+ICDKF T+CD G GAL+ASF GL L+L+++ +SI+KL+ K  P  + 
Sbjct: 139 LGKNGNSHARWNKICDKFETFCDHGGGALIASFAGLILMLIISVMSIIKLLIKPKPDSTI 198

Query: 204 AAP 206
             P
Sbjct: 199 VVP 199

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BLAST of Sed0027287 vs. ExPASy Swiss-Prot
Match: C6TG62 (CASP-like protein 1B1 OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 194.9 bits (494), Expect = 8.9e-49
Identity = 103/173 (59.54%), Postives = 131/173 (75.72%), Query Frame = 0


Query: 25  KSKWECGFVLVRLVASLATASATLVMALNKEFKSVVVATIGTDPVTAIVAARFHHTPAFV 84
           K K +   + +R+VA  ATASATLVMA NK+ K +VVATIGT+PVT  + A F HTPAF+
Sbjct: 20  KPKKDWVILSLRVVAFFATASATLVMAFNKQTKGMVVATIGTNPVTITLTAMFQHTPAFI 79

Query: 85  FFVVANGIATLHNWIMIALTIFGPNLHFHGFRLPIIAILDMATAALASAGDGAAVFMAAL 144
           FFV+ N IA+ +N ++I + I GP   + G RL +IAILD+ T ALA+ GDGAA FMA L
Sbjct: 80  FFVIVNAIASFYNLLVIGVEILGPQYDYKGLRLGLIAILDVMTMALAATGDGAATFMAEL 139

Query: 145 GKHGNTHARWNQICDKFPTYCDRGAGALVASFVGLCLLLLVAAVSIVKLMKLN 198
           G++GN+HARW++ICDKF  YC+RG  ALVASFVGL LLL+V  +SI KL+KLN
Sbjct: 140 GRNGNSHARWDKICDKFEAYCNRGGVALVASFVGLILLLVVTVMSITKLLKLN 192

[Close]

BLAST of Sed0027287 vs. ExPASy Swiss-Prot
Match: B9I0U9 (CASP-like protein 1B1 OS=Populus trichocarpa OX=3694 GN=POPTRDRAFT_823125 PE=3 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 1.1e-46
Identity = 96/171 (56.14%), Postives = 129/171 (75.44%), Query Frame = 0


Query: 24  KKSKWECGFVLVRLVASLATASATLVMALNKEFKSVVVATIGTDPVTAIVAARFHHTPAF 83
           K  KW    ++VR+VA LATA+ATLVMALNKE K++VVAT+G  P+   + A+F HTPAF
Sbjct: 19  KPKKWV--LLMVRVVAFLATAAATLVMALNKETKTLVVATVGNTPIKVTLTAKFQHTPAF 78

Query: 84  VFFVVANGIATLHNWIMIALTIFGPNLHFHGFRLPIIAILDMATAALASAGDGAAVFMAA 143
           VFFV+ANG+A+ HN +MI + + G  L + G RL ++AILDM T AL S G  AA FMA 
Sbjct: 79  VFFVIANGMASFHNLLMIMVELCGQKLDYKGMRLAMVAILDMMTVALVSGGASAATFMAE 138

Query: 144 LGKHGNTHARWNQICDKFPTYCDRGAGALVASFVGLCLLLLVAAVSIVKLM 195
           LGK+GN+HARW++ICDKF T+CD G  AL+AS  GL L+++++ +SI+KL+
Sbjct: 139 LGKNGNSHARWDKICDKFETFCDHGGAALIASSAGLILMMIISVMSIMKLL 187

[Close]

BLAST of Sed0027287 vs. ExPASy Swiss-Prot
Match: A7QC16 (CASP-like protein 1B2 OS=Vitis vinifera OX=29760 GN=VIT_10s0092g00220 PE=2 SV=2)

HSP 1 Score: 184.5 bits (467), Expect = 1.2e-45
Identity = 98/193 (50.78%), Postives = 140/193 (72.54%), Query Frame = 0


Query: 1   MASLESEAAKTDVVGEYNQLAVAKKSKWECGFVLVRLVASLATASATLVMALNKEFKSVV 60
           MAS   E  K ++VG    +    K+K +   +++R+VA LATASAT+VM LN+E K+++
Sbjct: 1   MASKGEE--KPELVGSKQGIVSVTKAKHDQIVLVLRVVAFLATASATIVMGLNQETKTLL 60

Query: 61  VATIGTDPVTAIVAARFHHTPAFVFFVVANGIATLHNWIMIALTIFGPNLHFHGFRLPII 120
           V TIGT P+ A + A+F HTPAFVFFVVANG+A+++N +M+ + +FG  L   G RL II
Sbjct: 61  VGTIGTTPIRATLKAKFQHTPAFVFFVVANGLASVYNLVMLGVDVFGRKLDCKGLRLVII 120

Query: 121 AILDMATAALASAGDGAAVFMAALGKHGNTHARWNQICDKFPTYCDRGAGALVASFVGLC 180
           +ILDM   A+ +AG  +A FMA LGK+GN+HA+WN+ICDKF ++C +G GAL+ SF+ L 
Sbjct: 121 SILDMVIVAVVAAGASSAAFMAELGKNGNSHAKWNKICDKFESFCHQGGGALIPSFIALL 180

Query: 181 LLLLVAAVSIVKL 194
           LL L++A+SI+ L
Sbjct: 181 LLFLISAISIITL 191

[Close]

BLAST of Sed0027287 vs. ExPASy Swiss-Prot
Match: B9SV63 (CASP-like protein 1B1 OS=Ricinus communis OX=3988 GN=RCOM_0770240 PE=2 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 2.1e-45
Identity = 99/188 (52.66%), Postives = 135/188 (71.81%), Query Frame = 0


Query: 8   AAKTDVVGEYNQLAVAKKSKWECGFVLVRLVASLATASATLVMALNKEFKSVVVATIGTD 67
           A K +V    + L    KS W    +++R VA LATA+AT+VMA N+E K+ VVATIG+ 
Sbjct: 6   AEKPEVGSSPSSLGPRNKS-WV--LLMLRFVAFLATAAATIVMAANRETKTFVVATIGST 65

Query: 68  PVTAIVAARFHHTPAFVFFVVANGIATLHNWIMIALTIFGPNLHFHGFRLPIIAILDMAT 127
           P+ A V A+F HTPAFVFFV+ANG+ ++HN +MIA   F     + G R   +AILDM T
Sbjct: 66  PIKATVTAKFQHTPAFVFFVIANGMGSIHNLVMIAGDTFVRKFDYKGLRWVTVAILDMLT 125

Query: 128 AALASAGDGAAVFMAALGKHGNTHARWNQICDKFPTYCDRGAGALVASFVGLCLLLLVAA 187
           AAL S G  AAVFMA LGK+GN+HA+WN+ICD+F ++CD G  A++ASF+GL L+L+++ 
Sbjct: 126 AALISGGVNAAVFMAELGKNGNSHAKWNKICDRFGSFCDHGGAAIIASFIGLLLMLVISI 185

Query: 188 VSIVKLMK 196
           +SI+KL+K
Sbjct: 186 ISIIKLLK 190

[Close]

BLAST of Sed0027287 vs. ExPASy TrEMBL
Match: A0A6J1CN46 (CASP-like protein OS=Momordica charantia OX=3673 GN=LOC111012649 PE=3 SV=1)

HSP 1 Score: 293.1 bits (749), Expect = 8.9e-76
Identity = 160/211 (75.83%), Postives = 176/211 (83.41%), Query Frame = 0


Query: 4   LESEAA-KTDVVGEYN--------QLAVAKKSKWECGFVLVRLVASLATASATLVMALNK 63
           + SEAA K+D  GEYN          A A+ S+W  G V VRLVAS ATASATLVMALNK
Sbjct: 1   MASEAAVKSDGGGEYNVHVHDVAAARAKARNSRW--GLVAVRLVASFATASATLVMALNK 60

Query: 64  EFKSVVVATIGTDPVTAIVAARFHHTPAFVFFVVANGIATLHNWIMIALTIFGPNLHFHG 123
           E KSVVVATIGT P+TA VAARFHHTPAFVFFV+ANG+ATLHNWIMIAL IFGPNLHFHG
Sbjct: 61  ETKSVVVATIGTAPLTATVAARFHHTPAFVFFVIANGMATLHNWIMIALDIFGPNLHFHG 120

Query: 124 FRLPIIAILDMATAALASAGDGAAVFMAALGKHGNTHARWNQICDKFPTYCDRGAGALVA 183
           FRLPIIAILDMAT ALASAGDGAA FMAALGK+GN HARWN+ICDKF TYCD GAGAL+A
Sbjct: 121 FRLPIIAILDMATVALASAGDGAATFMAALGKNGNKHARWNKICDKFSTYCDHGAGALIA 180

Query: 184 SFVGLCLLLLVAAVSIVKLMKLNPSRSFAAP 206
           SFVGLCLLLL+  +SIVK++K  P+ SFA+P
Sbjct: 181 SFVGLCLLLLIDVISIVKVLKHKPNNSFASP 209

[Close]

BLAST of Sed0027287 vs. ExPASy TrEMBL
Match: A0A1S3C9C0 (CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103498288 PE=3 SV=1)

HSP 1 Score: 287.3 bits (734), Expect = 4.9e-74
Identity = 152/210 (72.38%), Postives = 176/210 (83.81%), Query Frame = 0


Query: 1   MASLESEAAKTDV-----VGEYNQLAVAKKSKWECGFVLVRLVASLATASATLVMALNKE 60
           MASL SE A T +     VGEYN LA+ KK  W  GF+L+RLVAS ATASATLVMALNKE
Sbjct: 1   MASLPSETAATTIVKANDVGEYNHLAMEKKRNW--GFILLRLVASFATASATLVMALNKE 60

Query: 61  FKSVVVATIGTDPVTAIVAARFHHTPAFVFFVVANGIATLHNWIMIALTIFGPNLHFHGF 120
            KS+VVATIGTDP+TA ++A F+HTPAF+FFVVANG+ATLHNW+MIAL IFGP  HF+GF
Sbjct: 61  TKSIVVATIGTDPLTATLSAHFYHTPAFIFFVVANGMATLHNWMMIALHIFGPKFHFNGF 120

Query: 121 RLPIIAILDMATAALASAGDGAAVFMAALGKHGNTHARWNQICDKFPTYCDRGAGALVAS 180
           RLPII+ILDM T ALASAGDGAA FMAALGK+GN HARWN+ICDKF TYCD GAGAL+AS
Sbjct: 121 RLPIISILDMTTVALASAGDGAATFMAALGKNGNKHARWNKICDKFSTYCDHGAGALIAS 180

Query: 181 FVGLCLLLLVAAVSIVKLMKLNPSRSFAAP 206
           FVGLCLLLL++A+SI+K +    + SFA+P
Sbjct: 181 FVGLCLLLLISAISIIKPLH-KSNNSFASP 207

[Close]

BLAST of Sed0027287 vs. ExPASy TrEMBL
Match: A0A5A7TIW7 (CASP-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold129G00320 PE=3 SV=1)

HSP 1 Score: 287.3 bits (734), Expect = 4.9e-74
Identity = 152/210 (72.38%), Postives = 176/210 (83.81%), Query Frame = 0


Query: 1   MASLESEAAKTDV-----VGEYNQLAVAKKSKWECGFVLVRLVASLATASATLVMALNKE 60
           MASL SE A T +     VGEYN LA+ KK  W  GF+L+RLVAS ATASATLVMALNKE
Sbjct: 1   MASLPSETAATTIVKANDVGEYNHLAMEKKRNW--GFILLRLVASFATASATLVMALNKE 60

Query: 61  FKSVVVATIGTDPVTAIVAARFHHTPAFVFFVVANGIATLHNWIMIALTIFGPNLHFHGF 120
            KS+VVATIGTDP+TA ++A F+HTPAF+FFVVANG+ATLHNW+MIAL IFGP  HF+GF
Sbjct: 61  TKSIVVATIGTDPLTATLSAHFYHTPAFIFFVVANGMATLHNWMMIALHIFGPKFHFNGF 120

Query: 121 RLPIIAILDMATAALASAGDGAAVFMAALGKHGNTHARWNQICDKFPTYCDRGAGALVAS 180
           RLPII+ILDM T ALASAGDGAA FMAALGK+GN HARWN+ICDKF TYCD GAGAL+AS
Sbjct: 121 RLPIISILDMTTVALASAGDGAATFMAALGKNGNKHARWNKICDKFSTYCDHGAGALIAS 180

Query: 181 FVGLCLLLLVAAVSIVKLMKLNPSRSFAAP 206
           FVGLCLLLL++A+SI+K +    + SFA+P
Sbjct: 181 FVGLCLLLLISAISIIKPLH-KSNNSFASP 207

[Close]

BLAST of Sed0027287 vs. ExPASy TrEMBL
Match: A0A6J1EHK2 (CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111434235 PE=3 SV=1)

HSP 1 Score: 286.2 bits (731), Expect = 1.1e-73
Identity = 154/211 (72.99%), Postives = 173/211 (81.99%), Query Frame = 0


Query: 1   MASLESEAAKTDV----VGEYNQLAVAK--KSKWECGFVLVRLVASLATASATLVMALNK 60
           MASL+SEAA        VGEYN LAVA     KW  G VLVRLVAS ATASATLVMALNK
Sbjct: 1   MASLQSEAAAAAAAKAEVGEYNHLAVASPPTRKWRWGLVLVRLVASFATASATLVMALNK 60

Query: 61  EFKSVVVATIGTDPVTAIVAARFHHTPAFVFFVVANGIATLHNWIMIALTIFGPNLHFHG 120
           E KSVVVAT+GT P+TA ++ARF HTPAF+FFVVANG+ATLHNW+MIAL IFGP+  FHG
Sbjct: 61  ESKSVVVATVGTAPLTATISARFQHTPAFIFFVVANGVATLHNWLMIALDIFGPDYRFHG 120

Query: 121 FRLPIIAILDMATAALASAGDGAAVFMAALGKHGNTHARWNQICDKFPTYCDRGAGALVA 180
           FRLPIIAILDM T ALASAGDGAA FMAALGK+GN HARWN+ICDKF  YCD GAGAL+A
Sbjct: 121 FRLPIIAILDMTTVALASAGDGAATFMAALGKNGNKHARWNKICDKFSAYCDHGAGALIA 180

Query: 181 SFVGLCLLLLVAAVSIVKLMKLNPSRSFAAP 206
           SFVGLCLLLL++++SI+KL+   P  S A+P
Sbjct: 181 SFVGLCLLLLISSISIIKLLH-KPRPSIASP 210

[Close]

BLAST of Sed0027287 vs. ExPASy TrEMBL
Match: A0A6J1KMJ6 (CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111495531 PE=3 SV=1)

HSP 1 Score: 285.0 bits (728), Expect = 2.4e-73
Identity = 154/211 (72.99%), Postives = 171/211 (81.04%), Query Frame = 0


Query: 1   MASLESEAAKTDV----VGEYNQLAVAK--KSKWECGFVLVRLVASLATASATLVMALNK 60
           MASL+SEAA        VGEYN LAVA     KW  G VLVRLVAS AT SATLVMALNK
Sbjct: 1   MASLQSEAAAAAAAKAEVGEYNHLAVASPPPRKWRWGLVLVRLVASFATVSATLVMALNK 60

Query: 61  EFKSVVVATIGTDPVTAIVAARFHHTPAFVFFVVANGIATLHNWIMIALTIFGPNLHFHG 120
           E KSVVVAT+GT P+TA ++ARF HTPAF+FFVVANG+ATLHNW+MIAL IFGP+  FHG
Sbjct: 61  ESKSVVVATVGTAPLTATISARFQHTPAFIFFVVANGVATLHNWLMIALDIFGPDFRFHG 120

Query: 121 FRLPIIAILDMATAALASAGDGAAVFMAALGKHGNTHARWNQICDKFPTYCDRGAGALVA 180
           FRLPIIAILDM T ALASAGDGAA FMAALGK+GN HARWN+ICDKF  YCD GAGAL+A
Sbjct: 121 FRLPIIAILDMTTVALASAGDGAATFMAALGKNGNKHARWNKICDKFSAYCDHGAGALIA 180

Query: 181 SFVGLCLLLLVAAVSIVKLMKLNPSRSFAAP 206
           SFVGLCLLLL+ A+SI+KL+   P  S A+P
Sbjct: 181 SFVGLCLLLLINAISIIKLLH-KPRPSIASP 210

[Close]

BLAST of Sed0027287 vs. TAIR 10
Match: AT5G44550.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 178.7 bits (452), Expect = 4.7e-45
Identity = 97/188 (51.60%), Postives = 129/188 (68.62%), Query Frame = 0


Query: 18  NQLAVAKKSKWECGFVL-VRLVASLATASATLVMALNKEFKSVVVATIGTDPVTAIVAAR 77
           ++L +A  S   C  +L +RL+A  AT SA +VM LNKE K+ +V  +G  P+ A   A+
Sbjct: 4   SKLTLAATSGKSCKILLGLRLLAFSATLSAAIVMGLNKETKTFIVGKVGNTPIQATFTAK 63

Query: 78  FHHTPAFVFFVVANGIATLHNWIMIALTIFGPNLHFHGFRLPIIAILDMATAALASAGDG 137
           F HTPAFVFFVVAN + + HN +MIAL IFG  + F GFRL  +AILDM    L SA   
Sbjct: 64  FDHTPAFVFFVVANAMVSFHNLLMIALQIFGGKMEFTGFRLLSVAILDMLNVTLISAAAN 123

Query: 138 AAVFMAALGKHGNTHARWNQICDKFPTYCDRGAGALVASFVGLCLLLLVAAVSIVKLMKL 197
           AA FMA +GK+GN HARW++ICD+F TYCD GAGAL+A+F G+ L+L+++A SI +L++ 
Sbjct: 124 AAAFMAEVGKNGNKHARWDKICDRFATYCDHGAGALIAAFAGVILMLIISAASISRLVQP 183

Query: 198 NPSRSFAA 205
           N   S  A
Sbjct: 184 NKCCSTTA 191

[Close]

BLAST of Sed0027287 vs. TAIR 10
Match: AT4G20390.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 177.9 bits (450), Expect = 8.0e-45
Identity = 91/160 (56.88%), Postives = 122/160 (76.25%), Query Frame = 0


Query: 35  VRLVASLATASATLVMALNKEFKSVVVATIGTDPVTAIVAARFHHTPAFVFFVVANGIAT 94
           +R+ A +AT +A +VM+LNKE K++VVATIGT P+ A + A+F HTPAFVFFV+AN + +
Sbjct: 22  LRIFAFMATLAAAIVMSLNKETKTLVVATIGTVPIKATLTAKFQHTPAFVFFVIANVMVS 81

Query: 95  LHNWIMIALTIFGPNLHFHGFRLPIIAILDMATAALASAGDGAAVFMAALGKHGNTHARW 154
            HN +MI + IF   L + G RL  IAILDM  A L SA   AAVF+A LGK+GN HA+W
Sbjct: 82  FHNLLMIVVQIFSRKLEYKGLRLLSIAILDMLNATLVSAAANAAVFVAELGKNGNKHAKW 141

Query: 155 NQICDKFPTYCDRGAGALVASFVGLCLLLLVAAVSIVKLM 195
           N++CD+F TYCD GAGA++A+F G+ L+LLV+AVSI +L+
Sbjct: 142 NKVCDRFTTYCDHGAGAIIAAFAGVILMLLVSAVSISRLL 181

[Close]

BLAST of Sed0027287 vs. TAIR 10
Match: AT1G03700.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 67.0 bits (162), Expect = 2.0e-11
Identity = 48/160 (30.00%), Postives = 79/160 (49.38%), Query Frame = 0


Query: 31  GFVLVRLVASLATASATLVMALNKEFKSVVVATIGTDPVTAIVAARFHHTPAFVFFVVAN 90
           G +++R  A  A   A + M  ++E  S  V ++          A++    AF +FV+AN
Sbjct: 9   GGLVLRFAAFCAALGAVIAMITSRERSSFFVISL---------VAKYSDLAAFKYFVIAN 68

Query: 91  GIATLHNWIMIALTIFGPNLHFHGFRLPIIAILDMATAALASAGDGAAVFMAALGKHGNT 150
            I T++++    L +F P           + +LD+    L ++   AAV +A +GK GN 
Sbjct: 69  AIVTVYSF----LVLFLPK---ESLLWKFVVVLDLMVTMLLTSSLSAAVAVAQVGKRGNA 128

Query: 151 HARWNQICDKFPTYCDRGAGALVASFVGLCLLLLVAAVSI 191
           +A W  IC + P +CD+  GAL+A  V L L + +   SI
Sbjct: 129 NAGWLPICGQVPRFCDQITGALIAGLVALVLYVFLLIFSI 152

[Close]

BLAST of Sed0027287 vs. TAIR 10
Match: AT4G15610.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 67.0 bits (162), Expect = 2.0e-11
Identity = 50/164 (30.49%), Postives = 88/164 (53.66%), Query Frame = 0


Query: 33  VLVRLVASLATASATLVMALNKEFKSVVVATIGTDPVTAIVAARFHHTPAFVFFVVANGI 92
           V++R V   AT ++ +VM  +K+ K++ +   GT P+  I AA F ++PA ++FVVA  +
Sbjct: 31  VVLRFVLFAATLTSIVVMVTSKQTKNIFLP--GT-PI-RIPAAEFTNSPALIYFVVALSV 90

Query: 93  ATLHNWIMIALTIFGPNLHFHGFRLPI-IAILDMATAALASAGDGAAVFMAALGKHGNTH 152
           A  ++ +   +T+     H     L + +AI+D     + ++  GA   +A LG  GN  
Sbjct: 91  ACFYSIVSTFVTVSAFKKHSCSAVLLLNLAIMDAVMVGIVASATGAGGGVAYLGLKGNKE 150

Query: 153 ARWNQICDKFPTYCDRGAGALVASFVGLCLLLLVAAVSIVKLMK 196
            RW +IC  +  +C    GA+  S     +LLL++ +S++ L K
Sbjct: 151 VRWGKICHIYDKFCRHVGGAIAVSLFASVVLLLLSIISVLSLYK 190

[Close]

BLAST of Sed0027287 vs. TAIR 10
Match: AT4G03540.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 66.6 bits (161), Expect = 2.6e-11
Identity = 47/160 (29.38%), Postives = 84/160 (52.50%), Query Frame = 0


Query: 31  GFVLVRLVASLATASATLVMALNKEFKSVVVATIGTDPVTAIVAARFHHTPAFVFFVVAN 90
           G +++RL A  A  +A +VM  ++E  S +  ++          A++    AF +FV+AN
Sbjct: 9   GGLVLRLAAFGAALAALIVMITSRERASFLAISL---------EAKYTDMAAFKYFVIAN 68

Query: 91  GIATLHNWIMIALTIFGPNLHFHGFRLPIIAILDMATAALASAGDGAAVFMAALGKHGNT 150
            + +++++    L +F P           + +LD+    L ++   AA+ +A +GK GN 
Sbjct: 69  AVVSVYSF----LVLFLPK---ESLLWKFVVVLDLVMTMLLTSSLSAALAVAQVGKKGNA 128

Query: 151 HARWNQICDKFPTYCDRGAGALVASFVGLCLLLLVAAVSI 191
           +A W  IC + P +CD+  GAL+A FV L L +L+   S+
Sbjct: 129 NAGWLPICGQVPKFCDQITGALIAGFVALVLYVLLLLYSL 152

The following BLAST results are available for this feature:

BLAST of Sed0027287 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022142567.1	1.8e-75	75.83	CASP-like protein 1B2 [Momordica charantia]	[more]
XP_023519194.1	2.0e-74	73.91	CASP-like protein 1B2 [Cucurbita pepo subsp. pepo]	[more]
KAG6583816.1	5.9e-74	73.33	CASP-like protein 1B2, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_008459066.1	1.0e-73	72.38	PREDICTED: CASP-like protein 1B2 [Cucumis melo] >XP_008459067.1 PREDICTED: CASP-...	[more]
XP_022927401.1	2.2e-73	72.99	CASP-like protein 1B2 [Cucurbita moschata]	[more]

BLAST of Sed0027287 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B9GIE4	1.4e-49	55.74	CASP-like protein 1B2 OS=Populus trichocarpa OX=3694 GN=POPTRDRAFT_798217 PE=3 S...	[more]
C6TG62	8.9e-49	59.54	CASP-like protein 1B1 OS=Glycine max OX=3847 PE=2 SV=1	[more]
B9I0U9	1.1e-46	56.14	CASP-like protein 1B1 OS=Populus trichocarpa OX=3694 GN=POPTRDRAFT_823125 PE=3 S...	[more]
A7QC16	1.2e-45	50.78	CASP-like protein 1B2 OS=Vitis vinifera OX=29760 GN=VIT_10s0092g00220 PE=2 SV=2	[more]
B9SV63	2.1e-45	52.66	CASP-like protein 1B1 OS=Ricinus communis OX=3988 GN=RCOM_0770240 PE=2 SV=1	[more]

BLAST of Sed0027287 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CN46	8.9e-76	75.83	CASP-like protein OS=Momordica charantia OX=3673 GN=LOC111012649 PE=3 SV=1	[more]
A0A1S3C9C0	4.9e-74	72.38	CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103498288 PE=3 SV=1	[more]
A0A5A7TIW7	4.9e-74	72.38	CASP-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold129G00...	[more]
A0A6J1EHK2	1.1e-73	72.99	CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111434235 PE=3 SV=1	[more]
A0A6J1KMJ6	2.4e-73	72.99	CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111495531 PE=3 SV=1	[more]

BLAST of Sed0027287 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G44550.1	4.7e-45	51.60	Uncharacterised protein family (UPF0497)	[more]
AT4G20390.1	8.0e-45	56.88	Uncharacterised protein family (UPF0497)	[more]
AT1G03700.1	2.0e-11	30.00	Uncharacterised protein family (UPF0497)	[more]
AT4G15610.1	2.0e-11	30.49	Uncharacterised protein family (UPF0497)	[more]
AT4G03540.1	2.6e-11	29.38	Uncharacterised protein family (UPF0497)	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006459	Casparian strip membrane protein	TIGRFAM	TIGR01569	TIGR01569	coord: 34..192 e-value: 1.4E-41 score: 139.9
IPR006702	Casparian strip membrane protein domain	PFAM	PF04535	DUF588	coord: 31..180 e-value: 3.6E-30 score: 104.7
None	No IPR available	PANTHER	PTHR11615:SF244	CASP-LIKE PROTEIN 1B2	coord: 21..195
None	No IPR available	PANTHER	PTHR11615	NITRATE, FORMATE, IRON DEHYDROGENASE	coord: 21..195

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0027287.1	Sed0027287.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0051539	4 iron, 4 sulfur cluster binding