Sed0027231 (gene) Chayote v1

Overview


Name	Sed0027231
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Profilin
Location	LG03: 11584945 .. 11588002 (-)
RNA-Seq Expression	Sed0027231
Synteny	Sed0027231

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAGAAATCATGGGCTTTAAGGCCCACTAAAAGAATTGAAAAAAAGAAAGAGAGAAGGGCATAAAGGTAATTTGAGAAGAAGAGATTGCAATTATTTAGGGGAAAAACAATTATTTGTGCGTGACATCAACGCTATCTCGGCGAAACTGCGCAGAGAGGATCATCATTTGGTGGAGCTCATTTCGTTTGCAGAGAGATAAATTGAATCCTCTCAACTCAAACGATTCAGCGAAGAAGAAGAACAAAAAAAAAAAAAAAACCCTAATCGGATCAAGATGTCTTGGCAAACTTACGTCGATGATCATTTGATGTGCGACATTGAGGGAAATCACCTCACATCGGCGGCCATTATCGGCCAGGACGGCAGCGTTTGGGCTCAAAGCGCCGCTTTCCCTCAGGTTTATTCTCTTTCTTTCTTTATCTCACAGGAAATTTCAAATCCGAGTGTTGATTGCTTTAATTTGATTGCTGGATCTGGATTTTTAACTTGAGATCTCGTTGTTTAGAGCTTGATGAGGACGATGGATTCTGTTTTATTTTAGATGATCTGATCTGATTGTTTTCTGGTTGATTGATGCATTGCTTGTTTATTGGATTGGTTTTCCGGAGGAATTGTATTCTGTTTTGTTCTGATTGAAATTAGAATCTGTTGTTAGTTTCCAATTTCTAAATATTCTTTTCGATCTGTTGTTGTGTTGCATCTCTCTTTAGTTCGTGTTTGTTGAGCGATATCACATTGTGTAATTGATTGAGTTCTTAGAAGAAGTCGATGAGGTTGGTTCGTGCAACTTTCTTGTTGGTTCTCAATGCATGTTCTTTGTTTTTGATTGTGTAGTTCAAGCCTGAAGAAGTTATTGCCATCATGAAGGATTTCGAAGAACCCGGGACGCTTGCTCCAACTGGTTTGTACCTTGGTGGTGCAAAATATATGGTAATTCAAGGGGAGCCTGGTGCTGTGATTCGTGGGAAGAAGGTAATTAATTGTACAAATTTGAACTTTCTGCTGTGATTTGTGACTATGACAGATGTGCATGTAAACCATTTATTCAAAAAATGTTTTAAAATAACTATTTGGGTTAGTCTAGTAGTTAAGAGGGTCTTGAGACGCGAAAGAAGCAATGAATTTGATCCTTTATTGTCATCTACCTAAAATGTCAACTAAATGTAGTAGGGTTGGGCAATTGTCTCTCCTCGGTTACTCATGAATATCAAAGAAATGTTGTTAAAGTAACTTTGTTAGTCCTATCTGAATGTGGGAACCTTCATCCTAGATTCGTTTCCTAATTAAAACTATCTGTTGATTACAGGGCCCAGGTGGAGTTACTGTTAAGAAGACTAATATGGCTCTAGTCATTGGCATCTATGATGAACCCATGACTCCTGGTCAGTGCAATATGATTGTTGAAAGGCTTGGGGATTATCTCGTCGACCAGGGTCTCTAAGTATCGGTACGTTTGCTGCCTTTACTCTCAATCTGAGTTCTTTCACATTTTTTCATTCATTTTTCTCTCATACCATCATTTTAATTGTGTAAAATGCAGGGAAACCGTGTATTGTTTGTTTGGAATTGAGTATGATGATGCTTGAGGATTGATGGTTATGCTTCTCGTTATTAGTGTTGTCTCTTTCACTTTTTGTTTTTGTTTTTGTTTTCCTTGAAATATTGTGGTGGTTTTCAAGTGAGGGGTCTATGTTGTAGTTACAGTGACCTCATCAAATGAATGTGGTAAACCAATGAGCAGAAGCTTATAAATTCTCTTTTTATTTTATCTGTTGATTTTTGCAGTAATATGAGGAGATATAGTTTCTCTAAACCCAAATGTGTGTTGTTGTTTTGACATTTCAGTTTATCTCATTCTCGCCCTAGATAAATTCTCTTTCATTTTCTTCCCTTTCCTTAATTATTTTTGCACTACTTGGTTTTGTTTCTTATGAGTATCTGGCTTAATCAAGCAAGATAATTGGTATTCTTGAATCTTCATTGATAATAAATCTTGTGAAACGACCTTACTTGAACAGTATCTGTGTTCTTGAGTTGACAAGGACACCAAGAATCTTTGGAAAGTTTGTAGGTTGCTGCCAGCCAAAAGTAACTAAATACTGTATGAAGGTTTCAACTTGCCCTTATTTTAGGTAGAACATACATAAAATAAACAGGTGGGTAAAAGTAAACTCGTGCTCTGTTTTTGTTCCAGTTGTGGGAATGTTGCAAATTATAAACAGGTGGGTAAATATGAACTTCAACATATATACATCAATGCAATGCATGGCATATTGGGTCCGTGAAAACATCTTCATTGATAAAATTAGTTACACATTTGGGAGATGTACTTGTATGCCGGAGTTCATCAAATTTGACTAGATGAAAATGGGGAAAGAGACACATCCCTATTTACTATTTAGTGCTAGGTGCTCTTGCAGATCTTCTGTACCCAAGTTGAACCTACAACACTTGGTCTACATCAATGTAGAGTTTTTAAAGTTGCACATGAACAATGCCATGATGCCATCATATGATATTGAGTGTTTGTTGTTGCTCACACTAATTTTACAGCATACAAAACATTCGTCGATCAACCAACATCAAAATCGAGGAACACCAAGATATTGTCACTTCACCGAACTGTAACTTTGAAGCTCAATCAATCCAACTATGGACCTAAATGTGCAACTTCCATGGTACATCATTGATACTTTGAATAGAAACTACAATGTCTAGAACAATATTGGGTGACAAGATTGTTGTTGTTGGATTACTAGTTAATACCCACTAGCTAAAGGTTCCAAATGTAAGAGTATATCTCAATCAAGGGTATCTAAGGGTGTGGAATGAATGACATAACTAAACGGTAACCATAGTGCATGTGCTTGTGGATCAGTTATCAATGCGTCTAAGGAGAACGCATTAAGTTAGATAGGGCAAAATATCTTGGCCTTGGAAAATGGATAGAACACAAGAATCATTTTGGTGCAATTTGGTTTGGTGAGATATGATTACGAAATTTGATATGACCTAATACTTAAAGAAGTGTTTTGAAAGTAGCAAAATGTTTAGAGAG

mRNA sequence

GAGAAATCATGGGCTTTAAGGCCCACTAAAAGAATTGAAAAAAAGAAAGAGAGAAGGGCATAAAGGTAATTTGAGAAGAAGAGATTGCAATTATTTAGGGGAAAAACAATTATTTGTGCGTGACATCAACGCTATCTCGGCGAAACTGCGCAGAGAGGATCATCATTTGGTGGAGCTCATTTCGTTTGCAGAGAGATAAATTGAATCCTCTCAACTCAAACGATTCAGCGAAGAAGAAGAACAAAAAAAAAAAAAAAACCCTAATCGGATCAAGATGTCTTGGCAAACTTACGTCGATGATCATTTGATGTGCGACATTGAGGGAAATCACCTCACATCGGCGGCCATTATCGGCCAGGACGGCAGCGTTTGGGCTCAAAGCGCCGCTTTCCCTCAGTTCAAGCCTGAAGAAGTTATTGCCATCATGAAGGATTTCGAAGAACCCGGGACGCTTGCTCCAACTGGTTTGTACCTTGGTGGTGCAAAATATATGGTAATTCAAGGGGAGCCTGGTGCTGTGATTCGTGGGAAGAAGGGCCCAGGTGGAGTTACTGTTAAGAAGACTAATATGGCTCTAGTCATTGGCATCTATGATGAACCCATGACTCCTGGTCAGTGCAATATGATTGTTGAAAGGCTTGGGGATTATCTCGTCGACCAGGGTCTCTAAGTATCGGGAAACCGTGTATTGTTTGTTTGGAATTGAGTATGATGATGCTTGAGGATTGATGGTTATGCTTCTCGTTATTAGTGTTGTCTCTTTCACTTTTTGTTTTTGTTTTTGTTTTCCTTGAAATATTGTGGTGGTTTTCAAGTGAGGGGTCTATGTTGTAGTTACAGTGACCTCATCAAATGAATGTGGTAAACCAATGAGCAGAAGCTTATAAATTCTCTTTTTATTTTATCTGTTGATTTTTGCAGTAATATGAGGAGATATAGTTTCTCTAAACCCAAATGTGTGTTGTTGTTTTGACATTTCAGTTTATCTCATTCTCGCCCTAGATAAATTCTCTTTCATTTTCTTCCCTTTCCTTAATTATTTTTGCACTACTTGGTTTTGTTTCTTATGAGTATCTGGCTTAATCAAGCAAGATAATTGGTATTCTTGAATCTTCATTGATAATAAATCTTGTGAAACGACCTTACTTGAACAGTATCTGTGTTCTTGAGTTGACAAGGACACCAAGAATCTTTGGAAAGTTTGTAGGTTGCTGCCAGCCAAAAGTAACTAAATACTGTATGAAGGTTTCAACTTGCCCTTATTTTAGGTAGAACATACATAAAATAAACAGGTGGGTAAAAGTAAACTCGTGCTCTGTTTTTGTTCCAGTTGTGGGAATGTTGCAAATTATAAACAGGTGGGTAAATATGAACTTCAACATATATACATCAATGCAATGCATGGCATATTGGGTCCGTGAAAACATCTTCATTGATAAAATTAGTTACACATTTGGGAGATGTACTTGTATGCCGGAGTTCATCAAATTTGACTAGATGAAAATGGGGAAAGAGACACATCCCTATTTACTATTTAGTGCTAGGTGCTCTTGCAGATCTTCTGTACCCAAGTTGAACCTACAACACTTGGTCTACATCAATGTAGAGTTTTTAAAGTTGCACATGAACAATGCCATGATGCCATCATATGATATTGAGTGTTTGTTGTTGCTCACACTAATTTTACAGCATACAAAACATTCGTCGATCAACCAACATCAAAATCGAGGAACACCAAGATATTGTCACTTCACCGAACTGTAACTTTGAAGCTCAATCAATCCAACTATGGACCTAAATGTGCAACTTCCATGGTACATCATTGATACTTTGAATAGAAACTACAATGTCTAGAACAATATTGGGTGACAAGATTGTTGTTGTTGGATTACTAGTTAATACCCACTAGCTAAAGGTTCCAAATGTAAGAGTATATCTCAATCAAGGGTATCTAAGGGTGTGGAATGAATGACATAACTAAACGGTAACCATAGTGCATGTGCTTGTGGATCAGTTATCAATGCGTCTAAGGAGAACGCATTAAGTTAGATAGGGCAAAATATCTTGGCCTTGGAAAATGGATAGAACACAAGAATCATTTTGGTGCAATTTGGTTTGGTGAGATATGATTACGAAATTTGATATGACCTAATACTTAAAGAAGTGTTTTGAAAGTAGCAAAATGTTTAGAGAG

Coding sequence (CDS)

ATGTCTTGGCAAACTTACGTCGATGATCATTTGATGTGCGACATTGAGGGAAATCACCTCACATCGGCGGCCATTATCGGCCAGGACGGCAGCGTTTGGGCTCAAAGCGCCGCTTTCCCTCAGTTCAAGCCTGAAGAAGTTATTGCCATCATGAAGGATTTCGAAGAACCCGGGACGCTTGCTCCAACTGGTTTGTACCTTGGTGGTGCAAAATATATGGTAATTCAAGGGGAGCCTGGTGCTGTGATTCGTGGGAAGAAGGGCCCAGGTGGAGTTACTGTTAAGAAGACTAATATGGCTCTAGTCATTGGCATCTATGATGAACCCATGACTCCTGGTCAGTGCAATATGATTGTTGAAAGGCTTGGGGATTATCTCGTCGACCAGGGTCTCTAA

Protein sequence

MSWQTYVDDHLMCDIEGNHLTSAAIIGQDGSVWAQSAAFPQFKPEEVIAIMKDFEEPGTLAPTGLYLGGAKYMVIQGEPGAVIRGKKGPGGVTVKKTNMALVIGIYDEPMTPGQCNMIVERLGDYLVDQGL

Homology

[Close]

BLAST of Sed0027231 vs. NCBI nr
Match: XP_031386499.1 (profilin-1 [Punica granatum] >OWM90960.1 hypothetical protein CDL15_Pgr019272 [Punica granatum] >PKI47168.1 hypothetical protein CRG98_032439 [Punica granatum])

HSP 1 Score: 259.6 bits (662), Expect = 1.4e-65
Identity = 119/131 (90.84%), Postives = 126/131 (96.18%), Query Frame = 0


Query: 1   MSWQTYVDDHLMCDIEGNHLTSAAIIGQDGSVWAQSAAFPQFKPEEVIAIMKDFEEPGTL 60
           MSWQTYVD+HLMCDIEGNHLTSAAIIGQDGSVWAQS++FPQFKPEE+ AIM DF EPGTL
Sbjct: 1   MSWQTYVDEHLMCDIEGNHLTSAAIIGQDGSVWAQSSSFPQFKPEEITAIMNDFTEPGTL 60

Query: 61  APTGLYLGGAKYMVIQGEPGAVIRGKKGPGGVTVKKTNMALVIGIYDEPMTPGQCNMIVE 120
           APTGL+LGG KYMVIQGEPGAVIRGKKGPGGVTVKKTN AL+IGIYDEPMTPGQCNMIVE
Sbjct: 61  APTGLFLGGTKYMVIQGEPGAVIRGKKGPGGVTVKKTNQALIIGIYDEPMTPGQCNMIVE 120

Query: 121 RLGDYLVDQGL 132
           RLGDYL+DQGL
Sbjct: 121 RLGDYLIDQGL 131

[Close]

BLAST of Sed0027231 vs. NCBI nr
Match: XP_022154695.1 (profilin-1 [Momordica charantia])

HSP 1 Score: 257.7 bits (657), Expect = 5.5e-65
Identity = 119/131 (90.84%), Postives = 125/131 (95.42%), Query Frame = 0


Query: 1   MSWQTYVDDHLMCDIEGNHLTSAAIIGQDGSVWAQSAAFPQFKPEEVIAIMKDFEEPGTL 60
           MSWQ YVDDHLMC+IEGNHLTS+AIIG DGSVWAQSAAFP FKPEE+ AIM DF EPGTL
Sbjct: 1   MSWQVYVDDHLMCEIEGNHLTSSAIIGHDGSVWAQSAAFPPFKPEEISAIMNDFSEPGTL 60

Query: 61  APTGLYLGGAKYMVIQGEPGAVIRGKKGPGGVTVKKTNMALVIGIYDEPMTPGQCNMIVE 120
           APTGLYLGGAKYMVIQGEPGAVIRGKKGPGGVTVKKT+MAL+IGIYDEPMTPGQCNMIVE
Sbjct: 61  APTGLYLGGAKYMVIQGEPGAVIRGKKGPGGVTVKKTSMALIIGIYDEPMTPGQCNMIVE 120

Query: 121 RLGDYLVDQGL 132
           RLGDYL+DQGL
Sbjct: 121 RLGDYLIDQGL 131

[Close]

BLAST of Sed0027231 vs. NCBI nr
Match: XP_002514199.1 (profilin-1 [Ricinus communis] >O82572.1 RecName: Full=Profilin-1 [Ricinus communis] >AAC62482.1 profilin [Ricinus communis] >EEF48153.1 profilin, putative [Ricinus communis])

HSP 1 Score: 257.3 bits (656), Expect = 7.1e-65
Identity = 118/131 (90.08%), Postives = 124/131 (94.66%), Query Frame = 0


Query: 1   MSWQTYVDDHLMCDIEGNHLTSAAIIGQDGSVWAQSAAFPQFKPEEVIAIMKDFEEPGTL 60
           MSWQTYVDDHLMC+IEGNHLTSAAIIGQDGSVWAQS+ FPQFKPEE+ AIM DF EPG+L
Sbjct: 1   MSWQTYVDDHLMCEIEGNHLTSAAIIGQDGSVWAQSSTFPQFKPEEITAIMNDFNEPGSL 60

Query: 61  APTGLYLGGAKYMVIQGEPGAVIRGKKGPGGVTVKKTNMALVIGIYDEPMTPGQCNMIVE 120
           APTGLYL G KYMVIQGEPGAVIRGKKGPGGVTVKKTN AL+IGIYDEPMTPGQCNMIVE
Sbjct: 61  APTGLYLSGTKYMVIQGEPGAVIRGKKGPGGVTVKKTNQALIIGIYDEPMTPGQCNMIVE 120

Query: 121 RLGDYLVDQGL 132
           RLGDYL+DQGL
Sbjct: 121 RLGDYLIDQGL 131

[Close]

BLAST of Sed0027231 vs. NCBI nr
Match: XP_021605919.1 (profilin-1 [Manihot esculenta] >OAY53847.1 hypothetical protein MANES_03G028300v8 [Manihot esculenta])

HSP 1 Score: 257.3 bits (656), Expect = 7.1e-65
Identity = 117/131 (89.31%), Postives = 125/131 (95.42%), Query Frame = 0


Query: 1   MSWQTYVDDHLMCDIEGNHLTSAAIIGQDGSVWAQSAAFPQFKPEEVIAIMKDFEEPGTL 60
           MSWQTYVDDHLMC+IE NHLT+AAIIGQDGSVWAQS++FPQFKPEE+  IM DF EPGTL
Sbjct: 1   MSWQTYVDDHLMCEIESNHLTAAAIIGQDGSVWAQSSSFPQFKPEEITGIMNDFNEPGTL 60

Query: 61  APTGLYLGGAKYMVIQGEPGAVIRGKKGPGGVTVKKTNMALVIGIYDEPMTPGQCNMIVE 120
           APTGLYLGG KYMVIQGEPGAVIRGKKGPGGVTVKKTN+AL+IGIYDEPMTPGQCNMIVE
Sbjct: 61  APTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTVKKTNLALIIGIYDEPMTPGQCNMIVE 120

Query: 121 RLGDYLVDQGL 132
           RLGDYL+DQGL
Sbjct: 121 RLGDYLIDQGL 131

[Close]

BLAST of Sed0027231 vs. NCBI nr
Match: XP_031381828.1 (profilin-1-like [Punica granatum])

HSP 1 Score: 256.9 bits (655), Expect = 9.3e-65
Identity = 119/131 (90.84%), Postives = 125/131 (95.42%), Query Frame = 0


Query: 1   MSWQTYVDDHLMCDIEGNHLTSAAIIGQDGSVWAQSAAFPQFKPEEVIAIMKDFEEPGTL 60
           MSWQTYVDDHLMC+IEGNHL SAAIIG DGSVWAQSA+FP FKPEE+ AIMKDFEEPG+L
Sbjct: 49  MSWQTYVDDHLMCEIEGNHLGSAAIIGHDGSVWAQSASFPAFKPEEITAIMKDFEEPGSL 108

Query: 61  APTGLYLGGAKYMVIQGEPGAVIRGKKGPGGVTVKKTNMALVIGIYDEPMTPGQCNMIVE 120
           APTGLYLGGAKYMVIQGEPGAVIRGKKGPGGVTVKKT  AL+IGIYDEPMTPGQCNMIVE
Sbjct: 109 APTGLYLGGAKYMVIQGEPGAVIRGKKGPGGVTVKKTTAALIIGIYDEPMTPGQCNMIVE 168

Query: 121 RLGDYLVDQGL 132
           RLGDYL+DQGL
Sbjct: 169 RLGDYLIDQGL 179

[Close]

BLAST of Sed0027231 vs. ExPASy Swiss-Prot
Match: O82572 (Profilin-1 OS=Ricinus communis OX=3988 GN=PRO1 PE=2 SV=1)

HSP 1 Score: 257.3 bits (656), Expect = 9.4e-68
Identity = 118/131 (90.08%), Postives = 124/131 (94.66%), Query Frame = 0


Query: 1   MSWQTYVDDHLMCDIEGNHLTSAAIIGQDGSVWAQSAAFPQFKPEEVIAIMKDFEEPGTL 60
           MSWQTYVDDHLMC+IEGNHLTSAAIIGQDGSVWAQS+ FPQFKPEE+ AIM DF EPG+L
Sbjct: 1   MSWQTYVDDHLMCEIEGNHLTSAAIIGQDGSVWAQSSTFPQFKPEEITAIMNDFNEPGSL 60

Query: 61  APTGLYLGGAKYMVIQGEPGAVIRGKKGPGGVTVKKTNMALVIGIYDEPMTPGQCNMIVE 120
           APTGLYL G KYMVIQGEPGAVIRGKKGPGGVTVKKTN AL+IGIYDEPMTPGQCNMIVE
Sbjct: 61  APTGLYLSGTKYMVIQGEPGAVIRGKKGPGGVTVKKTNQALIIGIYDEPMTPGQCNMIVE 120

Query: 121 RLGDYLVDQGL 132
           RLGDYL+DQGL
Sbjct: 121 RLGDYLIDQGL 131

[Close]

BLAST of Sed0027231 vs. ExPASy Swiss-Prot
Match: P49231 (Profilin-1 OS=Phaseolus vulgaris OX=3885 PE=1 SV=1)

HSP 1 Score: 253.4 bits (646), Expect = 1.4e-66
Identity = 114/131 (87.02%), Postives = 125/131 (95.42%), Query Frame = 0


Query: 1   MSWQTYVDDHLMCDIEGNHLTSAAIIGQDGSVWAQSAAFPQFKPEEVIAIMKDFEEPGTL 60
           MSWQTYVDDHL+C+IEGNHLT AAI+GQDGSVWA+SA+FPQFKPEE+  IM DF EPGTL
Sbjct: 1   MSWQTYVDDHLLCEIEGNHLTHAAILGQDGSVWAKSASFPQFKPEEITGIMNDFNEPGTL 60

Query: 61  APTGLYLGGAKYMVIQGEPGAVIRGKKGPGGVTVKKTNMALVIGIYDEPMTPGQCNMIVE 120
           APTGLY+GG KYMVIQGEPG+VIRGKKGPGGVTVKKTN+ALVIGIYDEPMTPGQCNMIVE
Sbjct: 61  APTGLYIGGTKYMVIQGEPGSVIRGKKGPGGVTVKKTNLALVIGIYDEPMTPGQCNMIVE 120

Query: 121 RLGDYLVDQGL 132
           RLGDYL++QGL
Sbjct: 121 RLGDYLIEQGL 131

[Close]

BLAST of Sed0027231 vs. ExPASy Swiss-Prot
Match: P0C0Y3 (Profilin OS=Fragaria ananassa OX=3747 PE=1 SV=1)

HSP 1 Score: 252.7 bits (644), Expect = 2.3e-66
Identity = 116/131 (88.55%), Postives = 125/131 (95.42%), Query Frame = 0


Query: 1   MSWQTYVDDHLMCDIEGNHLTSAAIIGQDGSVWAQSAAFPQFKPEEVIAIMKDFEEPGTL 60
           MSWQTYVDDHLMC+IEGNHL++AAIIGQDGSVWAQSA FPQ KPEEV  I++DF+EPGTL
Sbjct: 1   MSWQTYVDDHLMCEIEGNHLSAAAIIGQDGSVWAQSATFPQLKPEEVTGIVRDFDEPGTL 60

Query: 61  APTGLYLGGAKYMVIQGEPGAVIRGKKGPGGVTVKKTNMALVIGIYDEPMTPGQCNMIVE 120
           APTGLYLGG KYMVIQGEPGAVIRGKKGPGGVTVKKT +AL+IGIYDEPMTPGQCNMIVE
Sbjct: 61  APTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTVKKTTLALLIGIYDEPMTPGQCNMIVE 120

Query: 121 RLGDYLVDQGL 132
           RLGDYLV+QGL
Sbjct: 121 RLGDYLVEQGL 131

[Close]

BLAST of Sed0027231 vs. ExPASy Swiss-Prot
Match: Q93YI9 (Profilin OS=Capsicum annuum OX=4072 PE=1 SV=1)

HSP 1 Score: 251.5 bits (641), Expect = 5.1e-66
Identity = 116/131 (88.55%), Postives = 122/131 (93.13%), Query Frame = 0


Query: 1   MSWQTYVDDHLMCDIEGNHLTSAAIIGQDGSVWAQSAAFPQFKPEEVIAIMKDFEEPGTL 60
           MSWQTYVDDHLMC+IEGN LTSAAIIGQDGSVWAQSA FPQFKPEE+ AIM DF EPGTL
Sbjct: 1   MSWQTYVDDHLMCEIEGNRLTSAAIIGQDGSVWAQSATFPQFKPEEITAIMNDFAEPGTL 60

Query: 61  APTGLYLGGAKYMVIQGEPGAVIRGKKGPGGVTVKKTNMALVIGIYDEPMTPGQCNMIVE 120
           APTGLYLGG KYMVIQGE GAVIRGKKGPGG+TVKKTN AL+IGIYDEPMTPGQCNMIVE
Sbjct: 61  APTGLYLGGTKYMVIQGEAGAVIRGKKGPGGITVKKTNQALIIGIYDEPMTPGQCNMIVE 120

Query: 121 RLGDYLVDQGL 132
           RLGDYL++Q L
Sbjct: 121 RLGDYLIEQSL 131

[Close]

BLAST of Sed0027231 vs. ExPASy Swiss-Prot
Match: Q9STB6 (Profilin-2 OS=Hevea brasiliensis OX=3981 GN=PRO2 PE=1 SV=1)

HSP 1 Score: 250.0 bits (637), Expect = 1.5e-65
Identity = 114/130 (87.69%), Postives = 121/130 (93.08%), Query Frame = 0


Query: 1   MSWQTYVDDHLMCDIEGNHLTSAAIIGQDGSVWAQSAAFPQFKPEEVIAIMKDFEEPGTL 60
           MSWQ YVDDHLMC+IEGNHL++AAIIGQDGSVWAQSA FPQFK EE+  IM DF EPGTL
Sbjct: 1   MSWQAYVDDHLMCEIEGNHLSAAAIIGQDGSVWAQSANFPQFKSEEITGIMSDFHEPGTL 60

Query: 61  APTGLYLGGAKYMVIQGEPGAVIRGKKGPGGVTVKKTNMALVIGIYDEPMTPGQCNMIVE 120
           APTGLY+GG KYMVIQGEPGAVIRGKKGPGGVTVKKTN AL+IGIYDEPMTPGQCNMIVE
Sbjct: 61  APTGLYIGGTKYMVIQGEPGAVIRGKKGPGGVTVKKTNQALIIGIYDEPMTPGQCNMIVE 120

Query: 121 RLGDYLVDQG 131
           RLGDYL+DQG
Sbjct: 121 RLGDYLIDQG 130

[Close]

BLAST of Sed0027231 vs. ExPASy TrEMBL
Match: A0A218Y1J8 (Profilin OS=Punica granatum OX=22663 GN=LOC116199999 PE=3 SV=1)

HSP 1 Score: 259.6 bits (662), Expect = 7.0e-66
Identity = 119/131 (90.84%), Postives = 126/131 (96.18%), Query Frame = 0


Query: 1   MSWQTYVDDHLMCDIEGNHLTSAAIIGQDGSVWAQSAAFPQFKPEEVIAIMKDFEEPGTL 60
           MSWQTYVD+HLMCDIEGNHLTSAAIIGQDGSVWAQS++FPQFKPEE+ AIM DF EPGTL
Sbjct: 1   MSWQTYVDEHLMCDIEGNHLTSAAIIGQDGSVWAQSSSFPQFKPEEITAIMNDFTEPGTL 60

Query: 61  APTGLYLGGAKYMVIQGEPGAVIRGKKGPGGVTVKKTNMALVIGIYDEPMTPGQCNMIVE 120
           APTGL+LGG KYMVIQGEPGAVIRGKKGPGGVTVKKTN AL+IGIYDEPMTPGQCNMIVE
Sbjct: 61  APTGLFLGGTKYMVIQGEPGAVIRGKKGPGGVTVKKTNQALIIGIYDEPMTPGQCNMIVE 120

Query: 121 RLGDYLVDQGL 132
           RLGDYL+DQGL
Sbjct: 121 RLGDYLIDQGL 131

[Close]

BLAST of Sed0027231 vs. ExPASy TrEMBL
Match: A0A6J1DKC9 (Profilin OS=Momordica charantia OX=3673 GN=LOC111021891 PE=3 SV=1)

HSP 1 Score: 257.7 bits (657), Expect = 2.6e-65
Identity = 119/131 (90.84%), Postives = 125/131 (95.42%), Query Frame = 0


Query: 1   MSWQTYVDDHLMCDIEGNHLTSAAIIGQDGSVWAQSAAFPQFKPEEVIAIMKDFEEPGTL 60
           MSWQ YVDDHLMC+IEGNHLTS+AIIG DGSVWAQSAAFP FKPEE+ AIM DF EPGTL
Sbjct: 1   MSWQVYVDDHLMCEIEGNHLTSSAIIGHDGSVWAQSAAFPPFKPEEISAIMNDFSEPGTL 60

Query: 61  APTGLYLGGAKYMVIQGEPGAVIRGKKGPGGVTVKKTNMALVIGIYDEPMTPGQCNMIVE 120
           APTGLYLGGAKYMVIQGEPGAVIRGKKGPGGVTVKKT+MAL+IGIYDEPMTPGQCNMIVE
Sbjct: 61  APTGLYLGGAKYMVIQGEPGAVIRGKKGPGGVTVKKTSMALIIGIYDEPMTPGQCNMIVE 120

Query: 121 RLGDYLVDQGL 132
           RLGDYL+DQGL
Sbjct: 121 RLGDYLIDQGL 131

[Close]

BLAST of Sed0027231 vs. ExPASy TrEMBL
Match: B9RKF5 (Profilin OS=Ricinus communis OX=3988 GN=RCOM_1048920 PE=3 SV=1)

HSP 1 Score: 257.3 bits (656), Expect = 3.5e-65
Identity = 118/131 (90.08%), Postives = 124/131 (94.66%), Query Frame = 0


Query: 1   MSWQTYVDDHLMCDIEGNHLTSAAIIGQDGSVWAQSAAFPQFKPEEVIAIMKDFEEPGTL 60
           MSWQTYVDDHLMC+IEGNHLTSAAIIGQDGSVWAQS+ FPQFKPEE+ AIM DF EPG+L
Sbjct: 1   MSWQTYVDDHLMCEIEGNHLTSAAIIGQDGSVWAQSSTFPQFKPEEITAIMNDFNEPGSL 60

Query: 61  APTGLYLGGAKYMVIQGEPGAVIRGKKGPGGVTVKKTNMALVIGIYDEPMTPGQCNMIVE 120
           APTGLYL G KYMVIQGEPGAVIRGKKGPGGVTVKKTN AL+IGIYDEPMTPGQCNMIVE
Sbjct: 61  APTGLYLSGTKYMVIQGEPGAVIRGKKGPGGVTVKKTNQALIIGIYDEPMTPGQCNMIVE 120

Query: 121 RLGDYLVDQGL 132
           RLGDYL+DQGL
Sbjct: 121 RLGDYLIDQGL 131

[Close]

BLAST of Sed0027231 vs. ExPASy TrEMBL
Match: A0A2C9W3X9 (Profilin OS=Manihot esculenta OX=3983 GN=MANES_03G028300 PE=3 SV=1)

HSP 1 Score: 257.3 bits (656), Expect = 3.5e-65
Identity = 117/131 (89.31%), Postives = 125/131 (95.42%), Query Frame = 0


Query: 1   MSWQTYVDDHLMCDIEGNHLTSAAIIGQDGSVWAQSAAFPQFKPEEVIAIMKDFEEPGTL 60
           MSWQTYVDDHLMC+IE NHLT+AAIIGQDGSVWAQS++FPQFKPEE+  IM DF EPGTL
Sbjct: 1   MSWQTYVDDHLMCEIESNHLTAAAIIGQDGSVWAQSSSFPQFKPEEITGIMNDFNEPGTL 60

Query: 61  APTGLYLGGAKYMVIQGEPGAVIRGKKGPGGVTVKKTNMALVIGIYDEPMTPGQCNMIVE 120
           APTGLYLGG KYMVIQGEPGAVIRGKKGPGGVTVKKTN+AL+IGIYDEPMTPGQCNMIVE
Sbjct: 61  APTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTVKKTNLALIIGIYDEPMTPGQCNMIVE 120

Query: 121 RLGDYLVDQGL 132
           RLGDYL+DQGL
Sbjct: 121 RLGDYLIDQGL 131

[Close]

BLAST of Sed0027231 vs. ExPASy TrEMBL
Match: A0A218XGY3 (Profilin OS=Punica granatum OX=22663 GN=CDL15_Pgr000915 PE=3 SV=1)

HSP 1 Score: 256.9 bits (655), Expect = 4.5e-65
Identity = 119/131 (90.84%), Postives = 125/131 (95.42%), Query Frame = 0


Query: 1   MSWQTYVDDHLMCDIEGNHLTSAAIIGQDGSVWAQSAAFPQFKPEEVIAIMKDFEEPGTL 60
           MSWQTYVDDHLMC+IEGNHL SAAIIG DGSVWAQSA+FP FKPEE+ AIMKDFEEPG+L
Sbjct: 1   MSWQTYVDDHLMCEIEGNHLGSAAIIGHDGSVWAQSASFPAFKPEEITAIMKDFEEPGSL 60

Query: 61  APTGLYLGGAKYMVIQGEPGAVIRGKKGPGGVTVKKTNMALVIGIYDEPMTPGQCNMIVE 120
           APTGLYLGGAKYMVIQGEPGAVIRGKKGPGGVTVKKT  AL+IGIYDEPMTPGQCNMIVE
Sbjct: 61  APTGLYLGGAKYMVIQGEPGAVIRGKKGPGGVTVKKTTAALIIGIYDEPMTPGQCNMIVE 120

Query: 121 RLGDYLVDQGL 132
           RLGDYL+DQGL
Sbjct: 121 RLGDYLIDQGL 131

[Close]

BLAST of Sed0027231 vs. TAIR 10
Match: AT2G19760.1 (profilin 1 )

HSP 1 Score: 233.0 bits (593), Expect = 1.3e-61
Identity = 105/131 (80.15%), Postives = 117/131 (89.31%), Query Frame = 0


Query: 1   MSWQTYVDDHLMCDIEGNHLTSAAIIGQDGSVWAQSAAFPQFKPEEVIAIMKDFEEPGTL 60
           MSWQ+YVDDHLMCD+EGNHLT+AAI+GQDGSVWAQSA FPQ KP+E+  I KDFEEPG L
Sbjct: 1   MSWQSYVDDHLMCDVEGNHLTAAAILGQDGSVWAQSAKFPQLKPQEIDGIKKDFEEPGFL 60

Query: 61  APTGLYLGGAKYMVIQGEPGAVIRGKKGPGGVTVKKTNMALVIGIYDEPMTPGQCNMIVE 120
           APTGL+LGG KYMVIQGE GAVIRGKKGPGGVT+KKTN ALV G YDEPMT GQCN++VE
Sbjct: 61  APTGLFLGGEKYMVIQGEQGAVIRGKKGPGGVTIKKTNQALVFGFYDEPMTGGQCNLVVE 120

Query: 121 RLGDYLVDQGL 132
           RLGDYL++  L
Sbjct: 121 RLGDYLIESEL 131

[Close]

BLAST of Sed0027231 vs. TAIR 10
Match: AT4G29350.1 (profilin 2 )

HSP 1 Score: 228.8 bits (582), Expect = 2.5e-60
Identity = 103/131 (78.63%), Postives = 115/131 (87.79%), Query Frame = 0


Query: 1   MSWQTYVDDHLMCDIEGNHLTSAAIIGQDGSVWAQSAAFPQFKPEEVIAIMKDFEEPGTL 60
           MSWQ+YVDDHLMC++EGNHLT AAI GQDGSVWAQS+AFPQ KP E+  I KDFEE G L
Sbjct: 1   MSWQSYVDDHLMCEVEGNHLTHAAIFGQDGSVWAQSSAFPQLKPAEIAGINKDFEEAGHL 60

Query: 61  APTGLYLGGAKYMVIQGEPGAVIRGKKGPGGVTVKKTNMALVIGIYDEPMTPGQCNMIVE 120
           APTGL+LGG KYMV+QGE GAVIRGKKGPGGVT+KKT  ALV GIYDEPMT GQCN++VE
Sbjct: 61  APTGLFLGGEKYMVVQGEAGAVIRGKKGPGGVTIKKTTQALVFGIYDEPMTGGQCNLVVE 120

Query: 121 RLGDYLVDQGL 132
           RLGDYL++ GL
Sbjct: 121 RLGDYLIESGL 131

[Close]

BLAST of Sed0027231 vs. TAIR 10
Match: AT5G56600.1 (profilin 3 )

HSP 1 Score: 224.6 bits (571), Expect = 4.8e-59
Identity = 102/131 (77.86%), Postives = 113/131 (86.26%), Query Frame = 0


Query: 1   MSWQTYVDDHLMCDIEGNHLTSAAIIGQDGSVWAQSAAFPQFKPEEVIAIMKDFEEPGTL 60
           MSWQTYVDDHLMCD+ GN LT+AAI+GQDGSVWAQS  FPQ KPEE+  I  DF  PGTL
Sbjct: 38  MSWQTYVDDHLMCDVAGNRLTAAAILGQDGSVWAQSNNFPQVKPEEIQGIKDDFTTPGTL 97

Query: 61  APTGLYLGGAKYMVIQGEPGAVIRGKKGPGGVTVKKTNMALVIGIYDEPMTPGQCNMIVE 120
           APTGL+LGG KYMVIQGEP AVIRGKKG GGVT+KKT +ALV GIYDEPMTPGQCNM+VE
Sbjct: 98  APTGLFLGGNKYMVIQGEPNAVIRGKKGAGGVTIKKTTLALVFGIYDEPMTPGQCNMVVE 157

Query: 121 RLGDYLVDQGL 132
            LG+YL++ GL
Sbjct: 158 NLGEYLIESGL 168

[Close]

BLAST of Sed0027231 vs. TAIR 10
Match: AT2G19770.1 (profilin 5 )

HSP 1 Score: 221.9 bits (564), Expect = 3.1e-58
Identity = 98/134 (73.13%), Postives = 118/134 (88.06%), Query Frame = 0


Query: 1   MSWQTYVDDHLMCDI---EGNHLTSAAIIGQDGSVWAQSAAFPQFKPEEVIAIMKDFEEP 60
           MSWQ YVD+HLMCD+   +G+HLT+AAIIG DGSVWAQSA FPQFKP+E+  IMKDF+EP
Sbjct: 1   MSWQAYVDEHLMCDVGDGQGHHLTAAAIIGHDGSVWAQSANFPQFKPQEITDIMKDFDEP 60

Query: 61  GTLAPTGLYLGGAKYMVIQGEPGAVIRGKKGPGGVTVKKTNMALVIGIYDEPMTPGQCNM 120
           G LAPTG++L G KYMVIQGEP AVIRGKKG GG+T+KKT  ++V G+Y+EP+TPGQCNM
Sbjct: 61  GHLAPTGMFLAGLKYMVIQGEPNAVIRGKKGAGGITIKKTGQSMVFGLYEEPVTPGQCNM 120

Query: 121 IVERLGDYLVDQGL 132
           +VERLGDYL++QGL
Sbjct: 121 VVERLGDYLIEQGL 134

[Close]

BLAST of Sed0027231 vs. TAIR 10
Match: AT4G29340.1 (profilin 4 )

HSP 1 Score: 221.1 bits (562), Expect = 5.3e-58
Identity = 100/134 (74.63%), Postives = 118/134 (88.06%), Query Frame = 0


Query: 1   MSWQTYVDDHLMCDI---EGNHLTSAAIIGQDGSVWAQSAAFPQFKPEEVIAIMKDFEEP 60
           MSWQTYVD+HLMCD+   +G+HLT+AAI+G DGSVWAQSA FPQFK +E   IMKDF+EP
Sbjct: 1   MSWQTYVDEHLMCDVGDGQGHHLTAAAIVGHDGSVWAQSANFPQFKGQEFSDIMKDFDEP 60

Query: 61  GTLAPTGLYLGGAKYMVIQGEPGAVIRGKKGPGGVTVKKTNMALVIGIYDEPMTPGQCNM 120
           G LAPTGL++ GAKYMVIQGEPGAVIRGKKG GG+T+KKT  + V GIY+EP+TPGQCNM
Sbjct: 61  GHLAPTGLFMAGAKYMVIQGEPGAVIRGKKGAGGITIKKTGQSCVFGIYEEPVTPGQCNM 120

Query: 121 IVERLGDYLVDQGL 132
           +VERLGDYL++QGL
Sbjct: 121 VVERLGDYLLEQGL 134

The following BLAST results are available for this feature:

BLAST of Sed0027231 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031386499.1	1.4e-65	90.84	profilin-1 [Punica granatum] >OWM90960.1 hypothetical protein CDL15_Pgr019272 [P...	[more]
XP_022154695.1	5.5e-65	90.84	profilin-1 [Momordica charantia]	[more]
XP_002514199.1	7.1e-65	90.08	profilin-1 [Ricinus communis] >O82572.1 RecName: Full=Profilin-1 [Ricinus commun...	[more]
XP_021605919.1	7.1e-65	89.31	profilin-1 [Manihot esculenta] >OAY53847.1 hypothetical protein MANES_03G028300v...	[more]
XP_031381828.1	9.3e-65	90.84	profilin-1-like [Punica granatum]	[more]

BLAST of Sed0027231 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O82572	9.4e-68	90.08	Profilin-1 OS=Ricinus communis OX=3988 GN=PRO1 PE=2 SV=1	[more]
P49231	1.4e-66	87.02	Profilin-1 OS=Phaseolus vulgaris OX=3885 PE=1 SV=1	[more]
P0C0Y3	2.3e-66	88.55	Profilin OS=Fragaria ananassa OX=3747 PE=1 SV=1	[more]
Q93YI9	5.1e-66	88.55	Profilin OS=Capsicum annuum OX=4072 PE=1 SV=1	[more]
Q9STB6	1.5e-65	87.69	Profilin-2 OS=Hevea brasiliensis OX=3981 GN=PRO2 PE=1 SV=1	[more]

BLAST of Sed0027231 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A218Y1J8	7.0e-66	90.84	Profilin OS=Punica granatum OX=22663 GN=LOC116199999 PE=3 SV=1	[more]
A0A6J1DKC9	2.6e-65	90.84	Profilin OS=Momordica charantia OX=3673 GN=LOC111021891 PE=3 SV=1	[more]
B9RKF5	3.5e-65	90.08	Profilin OS=Ricinus communis OX=3988 GN=RCOM_1048920 PE=3 SV=1	[more]
A0A2C9W3X9	3.5e-65	89.31	Profilin OS=Manihot esculenta OX=3983 GN=MANES_03G028300 PE=3 SV=1	[more]
A0A218XGY3	4.5e-65	90.84	Profilin OS=Punica granatum OX=22663 GN=CDL15_Pgr000915 PE=3 SV=1	[more]

BLAST of Sed0027231 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G19760.1	1.3e-61	80.15	profilin 1	[more]
AT4G29350.1	2.5e-60	78.63	profilin 2	[more]
AT5G56600.1	4.8e-59	77.86	profilin 3	[more]
AT2G19770.1	3.1e-58	73.13	profilin 5	[more]
AT4G29340.1	5.3e-58	74.63	profilin 4	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005455	Profilin	PRINTS	PR01640	PROFILINPLNT	coord: 27..40 score: 80.13 coord: 104..117 score: 92.08 coord: 52..66 score: 78.91 coord: 84..99 score: 76.59 coord: 1..14 score: 88.18 coord: 117..130 score: 80.65 coord: 71..80 score: 96.73
IPR005455	Profilin	PRINTS	PR00392	PROFILIN	coord: 21..30 score: 67.75 coord: 113..130 score: 69.44 coord: 3..12 score: 76.25 coord: 100..113 score: 69.46 coord: 40..60 score: 55.6 coord: 64..78 score: 70.0
IPR005455	Profilin	SMART	SM00392	prof_2	coord: 1..131 e-value: 8.8E-59 score: 211.3
IPR005455	Profilin	PFAM	PF00235	Profilin	coord: 1..130 e-value: 1.9E-42 score: 144.4
IPR005455	Profilin	PANTHER	PTHR11604	PROFILIN	coord: 1..131
IPR005455	Profilin	CDD	cd00148	PROF	coord: 2..130 e-value: 4.12925E-57 score: 171.739
None	No IPR available	GENE3D	3.30.450.30	Dynein light chain 2a, cytoplasmic	coord: 1..131 e-value: 4.6E-57 score: 193.7
None	No IPR available	PANTHER	PTHR11604:SF44	PROFILIN-2	coord: 1..131
IPR027310	Profilin conserved site	PROSITE	PS00414	PROFILIN	coord: 1..8
IPR036140	Profilin superfamily	SUPERFAMILY	55770	Profilin (actin-binding protein)	coord: 2..130

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0027231.1	Sed0027231.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042989	sequestering of actin monomers
cellular_component	GO:0005938	cell cortex
cellular_component	GO:0005856	cytoskeleton
molecular_function	GO:0003785	actin monomer binding
molecular_function	GO:0003779	actin binding