Sed0027223 (gene) Chayote v1

Overview


Name	Sed0027223
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Proteasome subunit alpha type
Location	LG10: 29462456 .. 29466807 (-)
RNA-Seq Expression	Sed0027223
Synteny	Sed0027223

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AATCACCACACTCAAAAGTGGCCATCGCCAAATATATTGCCTTGGAGAAGACGAAAACCCCTAAATCCTCCATTAATACAACCTCAGATCGTGATTGTGACTCTGCAAAACCCTAGAATCCTCCGTTTCTTCTTCACCAAAAATGTTCAGGAACCAGTACGACACGGACGTGACGACATGGAGCCCGGCGGGGAGGTTGTTTCAGGTGGAGTACGCGATGGAGGCCGTGAAACAAGGCTCCGCCGCCATCGGCCTCCGATCCAACTCCCATGTGGTTCTGGCCTGCGTAAACAAGGCCAACTCCGAGCTTTCCTCTCACCAGAAGAAGATCTTCAAAGTCGACGACCACATCGGCCTCGCCATTTCCGGCCTTACTGCCGATGGCCGCGTTCTCTCTCGCTATATGAGATCTGAGTGTATCAATTACAGCTACACTTACGAATCTCCGCTTCCTGTCGGTCGTCTTGTTGTTCAACTTGCCGACAAGGCTCAGGTTTGTAAATTAAGCCCTCTCGTTTTTTGCTCACAATTTTGCTGTGCATTTCTTGAATTACATCACAGGCTTCCTCCTGAAATTATGATTTATCGTTTAAGGGTTAACTTTTCTGATTATTAAGCGCGCTAAGTGAGGAATATATTGTCAAATTTGTCAGTAACTGAGGTTATGGAGCATTTGGGAAATGGCACAATGTTTCCTTTGTGCCCTTTAATTTACAGCATTTTGAAGGCAGCTAAAGATTGTAGGCTATCTGTTTGCTTCTTATCTTATGTTGTTAGTATTTGTTTCACTGATTCTTTACCGCACAGTGGTAGAAGATAACTAGGAATTAAGTTCTTGATTTTGTTTGATTATTCTAATTGTTGAATTGCTTTGAACCCGCTTAACGTTGCTGGTTATTTTTTATTTTCTTTCTAATGTATTGTTGCTTAATAGTTTAAATTTTAGTAGAAGCCAGGAAGGTGAGTAATTATTTAGGCTCATAATGTATCTAAAATGCTGTTAACTTTGAATCTATTTGATGGTCAGGAGGTTGGATAGCCCCTAATGATTTTTTTTGTGGAAACTTTTCTCGGTAGAGTCGTGAAGGATGAATATTCTTATATGCATATCTATGTCATGTGATGTGATTGAGGGACTGAGTTGTGAACGAGAAATATATGCAGCTGGATAATTTAGGGCAAATGGTTTTCATTGTATTAGGGTTCAACTTTTTGAAGGTCCTGCACTGTCTTCGATCAACAATCTAAGGATCCTTGTATTTCAGGAATCGGGTTGAATCGATTGACGGGCACTGAGGATGGAACATTTTAACCTTCAAAGTTTACCGTTCTTGAATTTCGTTTCATTGTGTTTGTGCTACGTTGGTGCTGGTTTTGGTTTAAATATATTCTTTACAAGGTTAAATTCTACTTTAAAGTTCTTTGGTTTACCTAATCATCTTGATTTCTCAATTCATTTTCTACTTCCCTCCCTAATTGTAGATTTGTTGGCAATTTAGGCAAAAAATGTTGGTACTCATAAGGTGCATTTGGGCAATGGTTGGGTTATTATAAAAGAAGAGTTATCATAAGAGTGGTAATAAACCTGTATTTGTAGTGCAAGTTATCATAACATGAGGTTATTATAAAAGAGAGATTTATTATAACATGGCTAGAGGGTAGGGATTAGAGGTTATAGGCTAACCCATTGGTTATTATAACTGGTGGTCCAAATACGAGATGAGTTATTATAACCAACCCAACCTAAACCACCCTTAAATAGAGTTCCAAATGCTCCTTAATGGCTCATATTATAGTGTAGATTGAGGACCATGATAAGATCCGAAAGAACATGAAACTAACGATAGGGTTGATATTAGGGATATTTTAGGGGTATGGTGGCCTTCACTTCATCGAAATCGATATTCTCCTTTCTTTCAACACTTGCCAGATTTTCACCTTTGATTCTTTGACTTCAACTTCAACGATCTCTATCTTCTCCTTCATTGATTTTGATAAGCTCTCTTCTCTCCTAAGTTTCGAAGCTTGCCACTCTCTTTTTCTGCATTCGGCCTCTTCTCTACTTTTTTTTCAGCAATTTGCCTCCATTCTTCTCGAAAAGAATCAGCCAAAGTAAACCTTCATGAACAGCTCGCAGACCTTCATTATCCATCTTCCTAGCCAGAACCAAACAGTTTTGATACCATTGATAAGATCCAAAAGAACACGAAACTATTTATGATGTAAACGAAAAGGAAATACAAGATAACCAAACCAAGCTTCAGAGGAACTTGGACCTACCCATCTCGAGATCCCCTCTCAAGCCCTTAATCATTTACCAAATTATTGACTACCTTTACCTTTAGCCCTTACCTCTATTTATAACTGAAAGGACCAACAAACTCTCAACTAATTGCCCTACCCCTAAAATATGCCTCATAACAACCCTATCAGGACACTCTTGGTTTCCTGGCTTATATCTCCCACCTTTTGTTTTTATAAGAGACCGTGTATTCATAGCATAAATAAAGATAAAACAACCTAGAGTCCATGGCTAGAAGAAATCACATCCACAACAAGCTAATACATGAAGACCTTCCGACTAGGTTATGTTACAGACCACTATTATAAAGAAAAAAAGGCACTCTAACTAAAGCCTGTATGAAGAACATAATCACTAAAGTTATGTATGGATTTCTCTTTATCGGTTCATTCCTCTGGTTTCTTTCTAACCAAATGATCCACAAAATATCTCTAATGGAAAATCTTTCAAAGGGTTCTGTCTTTTCCTTTCAGTCATCTGCCCAAAAGAGCTTCAAGGAGCCTATCTTCCATGCATTTGAGAAGGAAATGATAGACCACTTATATTAGTTAGTTAGAGTTGGTTAAGCTATATGCCTATATAAAGTACCAGGCACCAGCCTAGGTCTCTTAAAGGGATATGAAATACTATTGTGTAAAAAGTTAGATCTTTGAAGAGGGAGATTGGGGAGATCTCGAAACATCTCTATTTAAATAATACCAAGATAGTTCTCTCTATTAGAAAACTGAAAATTGCTTTTATTCCCTATTTTTTCTGCTGTAAATTAGGTTTGCATCAACCAATTTGGATAAAAGGGAGCGAGGACTTGCATTTTTGGGTACTATTTTTACTATTTTCTTTCCCCATGGAGAGATTTAAACTGATTTGAGCTACTGTTTTTGATAATTCATGGTGAATACCTTCCCACAATAATATTTTTCCGGTACTTTCTCGAATCATTTAGATATTGGTCCCTAGGGTGCCATGCTTTCTTAGTCCCAGCTTTCCTATCATTTCCGTTAATAGAAAGTTCGGCAAAAGCTCTAGAAATGAAAGTGATGAAACAGGAATAATTATTGAGGGTATCATATTTTTGAATTGTTCTATATATATGTGCTGGTTCATATCACCTGGTTCAAGACACGGTTACTTTTCACAGGGAGAACCAGTTCTCATGCTCTTATGCTTTTCTCTAATTATCTCGGCCTCTGGTTGCAGGTCTGCACCCAGCGCTCATGGAAACGTCCCTATGGCGTCGGTCTGCTGGTAGGTGGTCTGGATGAGTCTGGCGCTCACCTTTATTACAACTGCCCCAGCGGGAACTACTTTGAATATCAAGCTTTTGCCATAGGATCCCGTTCACAGGCTGCAAAAACATACCTGGAGAGGAGGTTCAAGAACTTCCAGGACTCTTCTAGAGACGACTTGATCAAAGATGCCCTTACTGCAACCAGAGAAACCTTGCAAGGAGAAAAACTGACTTCCTCCATATGCACAATTGCTATTTTAGGAGTTGGGGAACCTTTTCATATATTGGATAGGGAAACTGTTCAGAATTTGATCGATGAATTCGAGCTCGTTAAGGAGGATGACATTCCTGCTGCAGATCAGGACATCACCCCGGAGCAGGGTGAACCTGCTGCTGCTCCTGAACCAGCTGCAGGAGCAGGCCAAGGTAGTGCCCCGGATCAAGGCGTGGCGCCAATGGACATCTAAGCTACACCTTGAAGACATCGCCTCTCCCCCTTCCCCGATTCCTGGATGTTGGTGTTAGGTTTGGTTCTTTAGTGCAGACACTTTGATACTTCTCTGTTGTTGCCTCAGATTTGAATTTTACATTTATGGAAGTTGTATCAGACTGTTGACAATGTTTTTACAACTGATTATGTTTTTCTATTATATTATTGGGAGAAAACGTTGAGATGATCCACCATGGTCTTTAGATATTTGGAATCCTTTTTTTCGATAATTAGATATTTGGAACCAGGAGATGATGATTTGTATGAATTTGAAACTATCTAACCCGTTTGCTGGGATCAAAGTTATGAATTTTAATGTTCTTCCCTTGGAA

mRNA sequence

AATCACCACACTCAAAAGTGGCCATCGCCAAATATATTGCCTTGGAGAAGACGAAAACCCCTAAATCCTCCATTAATACAACCTCAGATCGTGATTGTGACTCTGCAAAACCCTAGAATCCTCCGTTTCTTCTTCACCAAAAATGTTCAGGAACCAGTACGACACGGACGTGACGACATGGAGCCCGGCGGGGAGGTTGTTTCAGGTGGAGTACGCGATGGAGGCCGTGAAACAAGGCTCCGCCGCCATCGGCCTCCGATCCAACTCCCATGTGGTTCTGGCCTGCGTAAACAAGGCCAACTCCGAGCTTTCCTCTCACCAGAAGAAGATCTTCAAAGTCGACGACCACATCGGCCTCGCCATTTCCGGCCTTACTGCCGATGGCCGCGTTCTCTCTCGCTATATGAGATCTGAGTGTATCAATTACAGCTACACTTACGAATCTCCGCTTCCTGTCGGTCGTCTTGTTGTTCAACTTGCCGACAAGGCTCAGGTCTGCACCCAGCGCTCATGGAAACGTCCCTATGGCGTCGGTCTGCTGGTAGGTGGTCTGGATGAGTCTGGCGCTCACCTTTATTACAACTGCCCCAGCGGGAACTACTTTGAATATCAAGCTTTTGCCATAGGATCCCGTTCACAGGCTGCAAAAACATACCTGGAGAGGAGGTTCAAGAACTTCCAGGACTCTTCTAGAGACGACTTGATCAAAGATGCCCTTACTGCAACCAGAGAAACCTTGCAAGGAGAAAAACTGACTTCCTCCATATGCACAATTGCTATTTTAGGAGTTGGGGAACCTTTTCATATATTGGATAGGGAAACTGTTCAGAATTTGATCGATGAATTCGAGCTCGTTAAGGAGGATGACATTCCTGCTGCAGATCAGGACATCACCCCGGAGCAGGGTGAACCTGCTGCTGCTCCTGAACCAGCTGCAGGAGCAGGCCAAGGTAGTGCCCCGGATCAAGGCGTGGCGCCAATGGACATCTAAGCTACACCTTGAAGACATCGCCTCTCCCCCTTCCCCGATTCCTGGATGTTGGTGTTAGGTTTGGTTCTTTAGTGCAGACACTTTGATACTTCTCTGTTGTTGCCTCAGATTTGAATTTTACATTTATGGAAGTTGTATCAGACTGTTGACAATGTTTTTACAACTGATTATGTTTTTCTATTATATTATTGGGAGAAAACGTTGAGATGATCCACCATGGTCTTTAGATATTTGGAATCCTTTTTTTCGATAATTAGATATTTGGAACCAGGAGATGATGATTTGTATGAATTTGAAACTATCTAACCCGTTTGCTGGGATCAAAGTTATGAATTTTAATGTTCTTCCCTTGGAA

Coding sequence (CDS)

ATGTTCAGGAACCAGTACGACACGGACGTGACGACATGGAGCCCGGCGGGGAGGTTGTTTCAGGTGGAGTACGCGATGGAGGCCGTGAAACAAGGCTCCGCCGCCATCGGCCTCCGATCCAACTCCCATGTGGTTCTGGCCTGCGTAAACAAGGCCAACTCCGAGCTTTCCTCTCACCAGAAGAAGATCTTCAAAGTCGACGACCACATCGGCCTCGCCATTTCCGGCCTTACTGCCGATGGCCGCGTTCTCTCTCGCTATATGAGATCTGAGTGTATCAATTACAGCTACACTTACGAATCTCCGCTTCCTGTCGGTCGTCTTGTTGTTCAACTTGCCGACAAGGCTCAGGTCTGCACCCAGCGCTCATGGAAACGTCCCTATGGCGTCGGTCTGCTGGTAGGTGGTCTGGATGAGTCTGGCGCTCACCTTTATTACAACTGCCCCAGCGGGAACTACTTTGAATATCAAGCTTTTGCCATAGGATCCCGTTCACAGGCTGCAAAAACATACCTGGAGAGGAGGTTCAAGAACTTCCAGGACTCTTCTAGAGACGACTTGATCAAAGATGCCCTTACTGCAACCAGAGAAACCTTGCAAGGAGAAAAACTGACTTCCTCCATATGCACAATTGCTATTTTAGGAGTTGGGGAACCTTTTCATATATTGGATAGGGAAACTGTTCAGAATTTGATCGATGAATTCGAGCTCGTTAAGGAGGATGACATTCCTGCTGCAGATCAGGACATCACCCCGGAGCAGGGTGAACCTGCTGCTGCTCCTGAACCAGCTGCAGGAGCAGGCCAAGGTAGTGCCCCGGATCAAGGCGTGGCGCCAATGGACATCTAA

Protein sequence

MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSNSHVVLACVNKANSELSSHQKKIFKVDDHIGLAISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFKNFQDSSRDDLIKDALTATRETLQGEKLTSSICTIAILGVGEPFHILDRETVQNLIDEFELVKEDDIPAADQDITPEQGEPAAAPEPAAGAGQGSAPDQGVAPMDI

Homology

[Close]

BLAST of Sed0027223 vs. NCBI nr
Match: XP_008444739.1 (PREDICTED: proteasome subunit alpha type-1-B-like [Cucumis melo] >KAA0065218.1 proteasome subunit alpha type-1-B-like [Cucumis melo var. makuwa])

HSP 1 Score: 533.1 bits (1372), Expect = 1.5e-147
Identity = 267/282 (94.68%), Postives = 276/282 (97.87%), Query Frame = 0


Query: 1   MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSNSHVVLACVNKANSELSSHQ 60
           MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSN+HVVLACVNKANSELSSHQ
Sbjct: 1   MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSNTHVVLACVNKANSELSSHQ 60

Query: 61  KKIFKVDDHIGLAISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT 120
           KKIFKVDDHIG+AISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT
Sbjct: 61  KKIFKVDDHIGVAISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT 120

Query: 121 QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFKNFQ 180
           QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRF+NF+
Sbjct: 121 QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFK 180

Query: 181 DSSRDDLIKDALTATRETLQGEKLTSSICTIAILGVGEPFHILDRETVQNLIDEFELVKE 240
           DSSRD+LIKDAL ATRETLQGEKLTSSICTIAILGVGEPFHILDRETVQ LIDEFE+VKE
Sbjct: 181 DSSRDELIKDALIATRETLQGEKLTSSICTIAILGVGEPFHILDRETVQKLIDEFEIVKE 240

Query: 241 DDIPAADQDITPEQGEPAAAPEPAAGAGQGSAPDQGVAPMDI 283
           DD+PAADQDI PEQG+ +AAPEPAAG  QGSAPDQGVAPMDI
Sbjct: 241 DDVPAADQDIAPEQGD-SAAPEPAAGTDQGSAPDQGVAPMDI 281

[Close]

BLAST of Sed0027223 vs. NCBI nr
Match: XP_004152689.1 (proteasome subunit alpha type-1-B [Cucumis sativus] >KGN62618.1 hypothetical protein Csa_022520 [Cucumis sativus])

HSP 1 Score: 531.6 bits (1368), Expect = 4.2e-147
Identity = 266/282 (94.33%), Postives = 275/282 (97.52%), Query Frame = 0


Query: 1   MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSNSHVVLACVNKANSELSSHQ 60
           MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSN+HVVLACVNKANSELSSHQ
Sbjct: 1   MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSNTHVVLACVNKANSELSSHQ 60

Query: 61  KKIFKVDDHIGLAISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT 120
           KKIFKVDDHIG+AISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT
Sbjct: 61  KKIFKVDDHIGVAISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT 120

Query: 121 QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFKNFQ 180
           QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRF+NF+
Sbjct: 121 QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFK 180

Query: 181 DSSRDDLIKDALTATRETLQGEKLTSSICTIAILGVGEPFHILDRETVQNLIDEFELVKE 240
           DSSRD+LIKDAL ATRETLQGEKLTSSICTIAILGVGEPFHILDRETVQ LIDEFE+VKE
Sbjct: 181 DSSRDELIKDALIATRETLQGEKLTSSICTIAILGVGEPFHILDRETVQKLIDEFEIVKE 240

Query: 241 DDIPAADQDITPEQGEPAAAPEPAAGAGQGSAPDQGVAPMDI 283
           DD+PA DQDI PEQG+ +AAPEPAAG  QGSAPDQGVAPMDI
Sbjct: 241 DDVPAVDQDIAPEQGD-SAAPEPAAGTDQGSAPDQGVAPMDI 281

[Close]

BLAST of Sed0027223 vs. NCBI nr
Match: XP_023546840.1 (proteasome subunit alpha type-1-B-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 530.8 bits (1366), Expect = 7.2e-147
Identity = 265/282 (93.97%), Postives = 275/282 (97.52%), Query Frame = 0


Query: 1   MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSNSHVVLACVNKANSELSSHQ 60
           MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRS +HVVLACVNKANSELSSHQ
Sbjct: 1   MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLACVNKANSELSSHQ 60

Query: 61  KKIFKVDDHIGLAISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT 120
           KKIFKVDDHIG+AISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT
Sbjct: 61  KKIFKVDDHIGVAISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT 120

Query: 121 QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFKNFQ 180
           QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRF+NF+
Sbjct: 121 QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFK 180

Query: 181 DSSRDDLIKDALTATRETLQGEKLTSSICTIAILGVGEPFHILDRETVQNLIDEFELVKE 240
           DSSRDDLIKDAL ATRETLQGEKLTSSICTI+ILGVGEPFHILDRETVQ LIDEFE+VKE
Sbjct: 181 DSSRDDLIKDALMATRETLQGEKLTSSICTISILGVGEPFHILDRETVQQLIDEFEIVKE 240

Query: 241 DDIPAADQDITPEQGEPAAAPEPAAGAGQGSAPDQGVAPMDI 283
           DD+PAADQD+ PEQG+ +AAPEPAAG  QGSAPDQGVAPMDI
Sbjct: 241 DDVPAADQDVAPEQGD-SAAPEPAAGTDQGSAPDQGVAPMDI 281

[Close]

BLAST of Sed0027223 vs. NCBI nr
Match: XP_022951677.1 (proteasome subunit alpha type-1-B-like [Cucurbita moschata] >XP_023538349.1 proteasome subunit alpha type-1-B-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 527.3 bits (1357), Expect = 8.0e-146
Identity = 263/282 (93.26%), Postives = 274/282 (97.16%), Query Frame = 0


Query: 1   MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSNSHVVLACVNKANSELSSHQ 60
           MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRS +HVVLACVNKANSELSSHQ
Sbjct: 1   MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLACVNKANSELSSHQ 60

Query: 61  KKIFKVDDHIGLAISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT 120
           KKIFKVDDHIG+AISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT
Sbjct: 61  KKIFKVDDHIGVAISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT 120

Query: 121 QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFKNFQ 180
           QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRF+NF+
Sbjct: 121 QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFK 180

Query: 181 DSSRDDLIKDALTATRETLQGEKLTSSICTIAILGVGEPFHILDRETVQNLIDEFELVKE 240
           +SSRDDLIKDAL ATRETLQGEKLTSSICTIAILGVGEPFHILDRETVQ LI+EFE+VKE
Sbjct: 181 NSSRDDLIKDALIATRETLQGEKLTSSICTIAILGVGEPFHILDRETVQKLINEFEIVKE 240

Query: 241 DDIPAADQDITPEQGEPAAAPEPAAGAGQGSAPDQGVAPMDI 283
           DD+PAADQDI P+QG+ AAAPEPAA   QGSAP+QGVAPMDI
Sbjct: 241 DDVPAADQDIEPDQGDSAAAPEPAARTDQGSAPEQGVAPMDI 282

[Close]

BLAST of Sed0027223 vs. NCBI nr
Match: XP_022961863.1 (proteasome subunit alpha type-1-B-like [Cucurbita moschata])

HSP 1 Score: 526.2 bits (1354), Expect = 1.8e-145
Identity = 265/283 (93.64%), Postives = 275/283 (97.17%), Query Frame = 0


Query: 1   MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSNSHVVLACVNKANSELSSHQ 60
           MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRS +HVVLACVNKANSELSSHQ
Sbjct: 1   MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLACVNKANSELSSHQ 60

Query: 61  KKIFKVDDHIGLAISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT 120
           KKIFKVDDHIG+AISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT
Sbjct: 61  KKIFKVDDHIGVAISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT 120

Query: 121 QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFKNFQ 180
           QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRF+NF+
Sbjct: 121 QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFK 180

Query: 181 DSSRDDLIKDALTATRETLQGEKLTSSICTIAILGVGEPFHILDRETVQNLIDEFELVKE 240
           DSSRDDLIKDAL ATRETLQGEKLTSSICTI+ILGVGEPFHILDRETVQ LIDEFE+VKE
Sbjct: 181 DSSRDDLIKDALMATRETLQGEKLTSSICTISILGVGEPFHILDRETVQKLIDEFEIVKE 240

Query: 241 DDIPAADQDITPEQGEPAAAPEP-AAGAGQGSAPDQGVAPMDI 283
           DD+PAADQD+ PEQG+ +AAPEP AAG  QGSAPDQGVAPMDI
Sbjct: 241 DDVPAADQDVAPEQGD-SAAPEPAAAGTDQGSAPDQGVAPMDI 282

[Close]

BLAST of Sed0027223 vs. ExPASy Swiss-Prot
Match: O23712 (Proteasome subunit alpha type-1-B OS=Arabidopsis thaliana OX=3702 GN=PAF2 PE=1 SV=2)

HSP 1 Score: 441.8 bits (1135), Expect = 5.8e-123
Identity = 221/282 (78.37%), Postives = 247/282 (87.59%), Query Frame = 0


Query: 1   MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSNSHVVLACVNKANSELSSHQ 60
           MFRNQYDTDVTTWSP GRLFQVEYAMEAVKQGSAAIGLRS SHVVLACVNKA SELSSHQ
Sbjct: 1   MFRNQYDTDVTTWSPTGRLFQVEYAMEAVKQGSAAIGLRSRSHVVLACVNKAQSELSSHQ 60

Query: 61  KKIFKVDDHIGLAISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT 120
           +KIFKVDDHIG+AI+GLTADGRVLSRYMRSE IN+S+TYESPLPVGRLVV LADKAQVCT
Sbjct: 61  RKIFKVDDHIGVAIAGLTADGRVLSRYMRSESINHSFTYESPLPVGRLVVHLADKAQVCT 120

Query: 121 QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFKNFQ 180
           QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLER+F++FQ
Sbjct: 121 QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERKFESFQ 180

Query: 181 DSSRDDLIKDALTATRETLQGEKLTSSICTIAILGVGEPFHILDRETVQNLIDEFELVKE 240
           +SS++DLIKDA+ A RETLQGE L SS+CT+++LGV EPFH LD+E++Q +ID FE V E
Sbjct: 181 ESSKEDLIKDAIMAIRETLQGETLKSSLCTVSVLGVDEPFHFLDQESIQKVIDTFEKVPE 240

Query: 241 DDIPAADQDITPEQGEPAAAPEPAAGAGQGSAPDQGVAPMDI 283
           +     ++D    + EP AAP  A    QG + DQ VAPM+I
Sbjct: 241 E-----EEDAGEGEAEPEAAPGAAGTGEQGGSGDQDVAPMEI 277

[Close]

BLAST of Sed0027223 vs. ExPASy Swiss-Prot
Match: P34066 (Proteasome subunit alpha type-1-A OS=Arabidopsis thaliana OX=3702 GN=PAF1 PE=1 SV=3)

HSP 1 Score: 436.8 bits (1122), Expect = 1.9e-121
Identity = 223/282 (79.08%), Postives = 244/282 (86.52%), Query Frame = 0


Query: 1   MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSNSHVVLACVNKANSELSSHQ 60
           MFRNQYDTDVTTWSP GRLFQVEYAMEAVKQGSAAIGLRS SHVVLACVNKA SELSSHQ
Sbjct: 1   MFRNQYDTDVTTWSPTGRLFQVEYAMEAVKQGSAAIGLRSRSHVVLACVNKAQSELSSHQ 60

Query: 61  KKIFKVDDHIGLAISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT 120
           +KIFKVDDHIG+AI+GLTADGRVLSRYMRSE IN+S+TYESPLPVGRLVV LADKAQVCT
Sbjct: 61  RKIFKVDDHIGVAIAGLTADGRVLSRYMRSESINHSFTYESPLPVGRLVVHLADKAQVCT 120

Query: 121 QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFKNFQ 180
           QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRF++F 
Sbjct: 121 QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFESFG 180

Query: 181 DSSRDDLIKDALTATRETLQGEKLTSSICTIAILGVGEPFHILDRETVQNLIDEFELVKE 240
           DSSR+DLIKDA+ A RETLQGE L SS+CT+AILGV EPFH LD+E +Q +ID FE V E
Sbjct: 181 DSSREDLIKDAILAVRETLQGETLKSSLCTVAILGVDEPFHFLDQEAIQKVIDTFEKVPE 240

Query: 241 DDIPAADQDITPEQGEPAAAPEPAAGAGQGSAPDQGVAPMDI 283
           ++    + +    +GE  AA    A  G G A DQ VAPM++
Sbjct: 241 EE----EGEGEAGEGEAEAAEAAPAERGGGVAGDQDVAPMEM 278

[Close]

BLAST of Sed0027223 vs. ExPASy Swiss-Prot
Match: P52428 (Proteasome subunit alpha type-1 OS=Oryza sativa subsp. japonica OX=39947 GN=PAF1 PE=2 SV=1)

HSP 1 Score: 375.6 bits (963), Expect = 5.1e-103
Identity = 184/261 (70.50%), Postives = 219/261 (83.91%), Query Frame = 0


Query: 1   MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSNSHVVLACVNKANSELSSHQ 60
           MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSA +GLRS +H VLA  NKA SELSSHQ
Sbjct: 1   MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSACVGLRSRTHAVLAAANKAASELSSHQ 60

Query: 61  KKIFKVDDHIGLAISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT 120
           +K+F+V DH G+A++GLTADGRVLSR++RSECIN+++ Y++PLPV RL ++LADKAQVCT
Sbjct: 61  RKVFRVADHAGVALAGLTADGRVLSRFLRSECINHAFVYDAPLPVSRLALRLADKAQVCT 120

Query: 121 QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFKNFQ 180
           QRSWKRPYGVGLLV GLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKT+LERRF+ + 
Sbjct: 121 QRSWKRPYGVGLLVAGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTFLERRFEGYN 180

Query: 181 DSSRDDLIKDALTATRETLQGEKLTSSICTIAIL-----GVGEPFHILDRETVQNLIDEF 240
           D + + LIKDAL+A +ETLQGEKLTSS CT+AI+     G  EPF ++D + +Q +ID  
Sbjct: 181 DYTPEQLIKDALSAIKETLQGEKLTSSNCTVAIVGRKDDGTVEPFEMIDVKRIQEIIDSM 240

Query: 241 ELVKEDDIPAADQDITPEQGE 257
           E  +E   PAA+ + +  Q E
Sbjct: 241 EAAEE--APAAEAESSSMQEE 259

[Close]

BLAST of Sed0027223 vs. ExPASy Swiss-Prot
Match: Q27562 (Proteasome subunit alpha type-1 OS=Dictyostelium discoideum OX=44689 GN=psmA1 PE=3 SV=1)

HSP 1 Score: 273.5 bits (698), Expect = 2.7e-72
Identity = 133/244 (54.51%), Postives = 182/244 (74.59%), Query Frame = 0


Query: 1   MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSNSHVVLACVNKANSELSSHQ 60
           M+RNQYD+D+TT+SP+GR+ Q+EYAMEAVKQG AA+ L+S    VL  + +++SEL S+Q
Sbjct: 1   MYRNQYDSDITTFSPSGRIHQIEYAMEAVKQGGAAVALKSKQFAVLVSLKRSSSELGSYQ 60

Query: 61  KKIFKVDDHIGLAISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT 120
           KKIF VDDH+G+AISGLTAD R+L  YMR+EC NY+Y YES + V RLV ++ADK QV T
Sbjct: 61  KKIFVVDDHVGIAISGLTADARMLCNYMRNECSNYNYVYESQMRVERLVTKVADKHQVHT 120

Query: 121 QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFKNFQ 180
           QR  +RPYGVGLLV G D+ GAH+Y  CPSGN+++Y++ +IGSRSQ+AKTYLE+ F++F+
Sbjct: 121 QRYGRRPYGVGLLVAGYDQLGAHIYQTCPSGNFYDYKSISIGSRSQSAKTYLEKHFESFE 180

Query: 181 DSSRDDLIKDALTATRETLQG--EKLTSSICTIAILGVGEPFHILDRETVQ---NLIDEF 240
           + + + LI   L A RET+    + L S   +I I+G G+PF I++    Q   NL++  
Sbjct: 181 ECTLEQLITHGLRALRETIPNTDDTLNSKNVSIGIVGEGQPFKIIEEADAQPYLNLLENE 240

[Close]

BLAST of Sed0027223 vs. ExPASy Swiss-Prot
Match: Q9R1P4 (Proteasome subunit alpha type-1 OS=Mus musculus OX=10090 GN=Psma1 PE=1 SV=1)

HSP 1 Score: 260.8 bits (665), Expect = 1.8e-68
Identity = 124/237 (52.32%), Postives = 167/237 (70.46%), Query Frame = 0


Query: 1   MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSNSHVVLACVNKANSELSSHQ 60
           MFRNQYD DVT WSP GR+ Q+EYAMEAVKQGSA +GL+S +H VL  + +A SEL++HQ
Sbjct: 1   MFRNQYDNDVTVWSPQGRIHQIEYAMEAVKQGSATVGLKSKTHAVLVALKRAQSELAAHQ 60

Query: 61  KKIFKVDDHIGLAISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT 120
           KKI  VD+HIG++I+GLTAD R+L  +MR EC++  + ++ PLPV RLV  +  K Q+ T
Sbjct: 61  KKILHVDNHIGISIAGLTADARLLCNFMRQECLDSRFVFDRPLPVSRLVSLIGSKTQIPT 120

Query: 121 QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFKNFQ 180
           QR  +RPYGVGLL+ G D+ G H++  CPS NYF+ +A +IG+RSQ+A+TYLER    F 
Sbjct: 121 QRYGRRPYGVGLLIAGYDDMGPHIFQTCPSANYFDCRAMSIGARSQSARTYLERHMSEFM 180

Query: 181 DSSRDDLIKDALTATRETLQGEK-LTSSICTIAILGVGEPFHILDRETVQNLIDEFE 237
           + + D+L+K  L A RETL  E+ LT+   +I I+G    F I D + V   +D  E
Sbjct: 181 ECNLDELVKHGLRALRETLPAEQDLTTKNVSIGIVGKDLEFTIYDDDDVSPFLDGLE 237

[Close]

BLAST of Sed0027223 vs. ExPASy TrEMBL
Match: A0A5A7VC66 (Proteasome subunit alpha type OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G005560 PE=3 SV=1)

HSP 1 Score: 533.1 bits (1372), Expect = 7.0e-148
Identity = 267/282 (94.68%), Postives = 276/282 (97.87%), Query Frame = 0


Query: 1   MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSNSHVVLACVNKANSELSSHQ 60
           MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSN+HVVLACVNKANSELSSHQ
Sbjct: 1   MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSNTHVVLACVNKANSELSSHQ 60

Query: 61  KKIFKVDDHIGLAISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT 120
           KKIFKVDDHIG+AISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT
Sbjct: 61  KKIFKVDDHIGVAISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT 120

Query: 121 QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFKNFQ 180
           QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRF+NF+
Sbjct: 121 QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFK 180

Query: 181 DSSRDDLIKDALTATRETLQGEKLTSSICTIAILGVGEPFHILDRETVQNLIDEFELVKE 240
           DSSRD+LIKDAL ATRETLQGEKLTSSICTIAILGVGEPFHILDRETVQ LIDEFE+VKE
Sbjct: 181 DSSRDELIKDALIATRETLQGEKLTSSICTIAILGVGEPFHILDRETVQKLIDEFEIVKE 240

Query: 241 DDIPAADQDITPEQGEPAAAPEPAAGAGQGSAPDQGVAPMDI 283
           DD+PAADQDI PEQG+ +AAPEPAAG  QGSAPDQGVAPMDI
Sbjct: 241 DDVPAADQDIAPEQGD-SAAPEPAAGTDQGSAPDQGVAPMDI 281

[Close]

BLAST of Sed0027223 vs. ExPASy TrEMBL
Match: A0A1S3BBW8 (Proteasome subunit alpha type OS=Cucumis melo OX=3656 GN=LOC103487987 PE=3 SV=1)

HSP 1 Score: 533.1 bits (1372), Expect = 7.0e-148
Identity = 267/282 (94.68%), Postives = 276/282 (97.87%), Query Frame = 0


Query: 1   MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSNSHVVLACVNKANSELSSHQ 60
           MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSN+HVVLACVNKANSELSSHQ
Sbjct: 1   MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSNTHVVLACVNKANSELSSHQ 60

Query: 61  KKIFKVDDHIGLAISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT 120
           KKIFKVDDHIG+AISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT
Sbjct: 61  KKIFKVDDHIGVAISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT 120

Query: 121 QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFKNFQ 180
           QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRF+NF+
Sbjct: 121 QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFK 180

Query: 181 DSSRDDLIKDALTATRETLQGEKLTSSICTIAILGVGEPFHILDRETVQNLIDEFELVKE 240
           DSSRD+LIKDAL ATRETLQGEKLTSSICTIAILGVGEPFHILDRETVQ LIDEFE+VKE
Sbjct: 181 DSSRDELIKDALIATRETLQGEKLTSSICTIAILGVGEPFHILDRETVQKLIDEFEIVKE 240

Query: 241 DDIPAADQDITPEQGEPAAAPEPAAGAGQGSAPDQGVAPMDI 283
           DD+PAADQDI PEQG+ +AAPEPAAG  QGSAPDQGVAPMDI
Sbjct: 241 DDVPAADQDIAPEQGD-SAAPEPAAGTDQGSAPDQGVAPMDI 281

[Close]

BLAST of Sed0027223 vs. ExPASy TrEMBL
Match: A0A0A0LLH5 (Proteasome subunit alpha type OS=Cucumis sativus OX=3659 GN=Csa_2G361820 PE=3 SV=1)

HSP 1 Score: 531.6 bits (1368), Expect = 2.0e-147
Identity = 266/282 (94.33%), Postives = 275/282 (97.52%), Query Frame = 0


Query: 1   MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSNSHVVLACVNKANSELSSHQ 60
           MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSN+HVVLACVNKANSELSSHQ
Sbjct: 1   MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSNTHVVLACVNKANSELSSHQ 60

Query: 61  KKIFKVDDHIGLAISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT 120
           KKIFKVDDHIG+AISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT
Sbjct: 61  KKIFKVDDHIGVAISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT 120

Query: 121 QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFKNFQ 180
           QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRF+NF+
Sbjct: 121 QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFK 180

Query: 181 DSSRDDLIKDALTATRETLQGEKLTSSICTIAILGVGEPFHILDRETVQNLIDEFELVKE 240
           DSSRD+LIKDAL ATRETLQGEKLTSSICTIAILGVGEPFHILDRETVQ LIDEFE+VKE
Sbjct: 181 DSSRDELIKDALIATRETLQGEKLTSSICTIAILGVGEPFHILDRETVQKLIDEFEIVKE 240

Query: 241 DDIPAADQDITPEQGEPAAAPEPAAGAGQGSAPDQGVAPMDI 283
           DD+PA DQDI PEQG+ +AAPEPAAG  QGSAPDQGVAPMDI
Sbjct: 241 DDVPAVDQDIAPEQGD-SAAPEPAAGTDQGSAPDQGVAPMDI 281

[Close]

BLAST of Sed0027223 vs. ExPASy TrEMBL
Match: A0A6J1GIC0 (Proteasome subunit alpha type OS=Cucurbita moschata OX=3662 GN=LOC111454419 PE=3 SV=1)

HSP 1 Score: 527.3 bits (1357), Expect = 3.9e-146
Identity = 263/282 (93.26%), Postives = 274/282 (97.16%), Query Frame = 0


Query: 1   MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSNSHVVLACVNKANSELSSHQ 60
           MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRS +HVVLACVNKANSELSSHQ
Sbjct: 1   MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLACVNKANSELSSHQ 60

Query: 61  KKIFKVDDHIGLAISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT 120
           KKIFKVDDHIG+AISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT
Sbjct: 61  KKIFKVDDHIGVAISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT 120

Query: 121 QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFKNFQ 180
           QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRF+NF+
Sbjct: 121 QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFK 180

Query: 181 DSSRDDLIKDALTATRETLQGEKLTSSICTIAILGVGEPFHILDRETVQNLIDEFELVKE 240
           +SSRDDLIKDAL ATRETLQGEKLTSSICTIAILGVGEPFHILDRETVQ LI+EFE+VKE
Sbjct: 181 NSSRDDLIKDALIATRETLQGEKLTSSICTIAILGVGEPFHILDRETVQKLINEFEIVKE 240

Query: 241 DDIPAADQDITPEQGEPAAAPEPAAGAGQGSAPDQGVAPMDI 283
           DD+PAADQDI P+QG+ AAAPEPAA   QGSAP+QGVAPMDI
Sbjct: 241 DDVPAADQDIEPDQGDSAAAPEPAARTDQGSAPEQGVAPMDI 282

[Close]

BLAST of Sed0027223 vs. ExPASy TrEMBL
Match: A0A6J1HD20 (Proteasome subunit alpha type OS=Cucurbita moschata OX=3662 GN=LOC111462503 PE=3 SV=1)

HSP 1 Score: 526.2 bits (1354), Expect = 8.6e-146
Identity = 265/283 (93.64%), Postives = 275/283 (97.17%), Query Frame = 0


Query: 1   MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSNSHVVLACVNKANSELSSHQ 60
           MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRS +HVVLACVNKANSELSSHQ
Sbjct: 1   MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLACVNKANSELSSHQ 60

Query: 61  KKIFKVDDHIGLAISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT 120
           KKIFKVDDHIG+AISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT
Sbjct: 61  KKIFKVDDHIGVAISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT 120

Query: 121 QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFKNFQ 180
           QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRF+NF+
Sbjct: 121 QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFK 180

Query: 181 DSSRDDLIKDALTATRETLQGEKLTSSICTIAILGVGEPFHILDRETVQNLIDEFELVKE 240
           DSSRDDLIKDAL ATRETLQGEKLTSSICTI+ILGVGEPFHILDRETVQ LIDEFE+VKE
Sbjct: 181 DSSRDDLIKDALMATRETLQGEKLTSSICTISILGVGEPFHILDRETVQKLIDEFEIVKE 240

Query: 241 DDIPAADQDITPEQGEPAAAPEP-AAGAGQGSAPDQGVAPMDI 283
           DD+PAADQD+ PEQG+ +AAPEP AAG  QGSAPDQGVAPMDI
Sbjct: 241 DDVPAADQDVAPEQGD-SAAPEPAAAGTDQGSAPDQGVAPMDI 282

[Close]

BLAST of Sed0027223 vs. TAIR 10
Match: AT1G47250.1 (20S proteasome alpha subunit F2 )

HSP 1 Score: 441.8 bits (1135), Expect = 4.1e-124
Identity = 221/282 (78.37%), Postives = 247/282 (87.59%), Query Frame = 0


Query: 1   MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSNSHVVLACVNKANSELSSHQ 60
           MFRNQYDTDVTTWSP GRLFQVEYAMEAVKQGSAAIGLRS SHVVLACVNKA SELSSHQ
Sbjct: 1   MFRNQYDTDVTTWSPTGRLFQVEYAMEAVKQGSAAIGLRSRSHVVLACVNKAQSELSSHQ 60

Query: 61  KKIFKVDDHIGLAISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT 120
           +KIFKVDDHIG+AI+GLTADGRVLSRYMRSE IN+S+TYESPLPVGRLVV LADKAQVCT
Sbjct: 61  RKIFKVDDHIGVAIAGLTADGRVLSRYMRSESINHSFTYESPLPVGRLVVHLADKAQVCT 120

Query: 121 QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFKNFQ 180
           QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLER+F++FQ
Sbjct: 121 QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERKFESFQ 180

Query: 181 DSSRDDLIKDALTATRETLQGEKLTSSICTIAILGVGEPFHILDRETVQNLIDEFELVKE 240
           +SS++DLIKDA+ A RETLQGE L SS+CT+++LGV EPFH LD+E++Q +ID FE V E
Sbjct: 181 ESSKEDLIKDAIMAIRETLQGETLKSSLCTVSVLGVDEPFHFLDQESIQKVIDTFEKVPE 240

Query: 241 DDIPAADQDITPEQGEPAAAPEPAAGAGQGSAPDQGVAPMDI 283
           +     ++D    + EP AAP  A    QG + DQ VAPM+I
Sbjct: 241 E-----EEDAGEGEAEPEAAPGAAGTGEQGGSGDQDVAPMEI 277

[Close]

BLAST of Sed0027223 vs. TAIR 10
Match: AT5G42790.1 (proteasome alpha subunit F1 )

HSP 1 Score: 436.8 bits (1122), Expect = 1.3e-122
Identity = 223/282 (79.08%), Postives = 244/282 (86.52%), Query Frame = 0


Query: 1   MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSNSHVVLACVNKANSELSSHQ 60
           MFRNQYDTDVTTWSP GRLFQVEYAMEAVKQGSAAIGLRS SHVVLACVNKA SELSSHQ
Sbjct: 1   MFRNQYDTDVTTWSPTGRLFQVEYAMEAVKQGSAAIGLRSRSHVVLACVNKAQSELSSHQ 60

Query: 61  KKIFKVDDHIGLAISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT 120
           +KIFKVDDHIG+AI+GLTADGRVLSRYMRSE IN+S+TYESPLPVGRLVV LADKAQVCT
Sbjct: 61  RKIFKVDDHIGVAIAGLTADGRVLSRYMRSESINHSFTYESPLPVGRLVVHLADKAQVCT 120

Query: 121 QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFKNFQ 180
           QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRF++F 
Sbjct: 121 QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFESFG 180

Query: 181 DSSRDDLIKDALTATRETLQGEKLTSSICTIAILGVGEPFHILDRETVQNLIDEFELVKE 240
           DSSR+DLIKDA+ A RETLQGE L SS+CT+AILGV EPFH LD+E +Q +ID FE V E
Sbjct: 181 DSSREDLIKDAILAVRETLQGETLKSSLCTVAILGVDEPFHFLDQEAIQKVIDTFEKVPE 240

Query: 241 DDIPAADQDITPEQGEPAAAPEPAAGAGQGSAPDQGVAPMDI 283
           ++    + +    +GE  AA    A  G G A DQ VAPM++
Sbjct: 241 EE----EGEGEAGEGEAEAAEAAPAERGGGVAGDQDVAPMEM 278

[Close]

BLAST of Sed0027223 vs. TAIR 10
Match: AT1G53850.1 (20S proteasome alpha subunit E1 )

HSP 1 Score: 152.1 bits (383), Expect = 6.5e-37
Identity = 92/235 (39.15%), Postives = 136/235 (57.87%), Query Frame = 0


Query: 3   RNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSNSHVVLACVNKANSEL--SSHQ 62
           R +YD  V T+SP GRLFQVEYA+EA+K GS AIG+++   VVLA   +  S L   S  
Sbjct: 5   RTEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGVKTKEGVVLAVEKRITSPLLEPSSV 64

Query: 63  KKIFKVDDHIGLAISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKA---Q 122
           +KI ++DDHIG A+SGL AD R L  + R E  N+ ++Y  P+ V      L D A    
Sbjct: 65  EKIMEIDDHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFG 124

Query: 123 VCTQRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFK 182
              + S  RP+GV LL+ G DE+G  LYY  PSG +++  A AIGS S+ A + L+ +F 
Sbjct: 125 EGEEESMSRPFGVSLLIAGHDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQFN 184

Query: 183 NFQDSSRDDLIKDALTATRETLQGEKLTSSICTIAILGVGEPFHILDRETVQNLI 233
             +D S  +    A++  ++ ++ EK+T +   + I  V   +H+   + V+ +I
Sbjct: 185 --KDLSLQEAETIAVSILKQVME-EKVTPN--NVDIAKVAPAYHLYTPQEVEAVI 234

[Close]

BLAST of Sed0027223 vs. TAIR 10
Match: AT1G53850.2 (20S proteasome alpha subunit E1 )

HSP 1 Score: 152.1 bits (383), Expect = 6.5e-37
Identity = 92/235 (39.15%), Postives = 136/235 (57.87%), Query Frame = 0


Query: 3   RNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSNSHVVLACVNKANSEL--SSHQ 62
           R +YD  V T+SP GRLFQVEYA+EA+K GS AIG+++   VVLA   +  S L   S  
Sbjct: 5   RTEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGVKTKEGVVLAVEKRITSPLLEPSSV 64

Query: 63  KKIFKVDDHIGLAISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKA---Q 122
           +KI ++DDHIG A+SGL AD R L  + R E  N+ ++Y  P+ V      L D A    
Sbjct: 65  EKIMEIDDHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFG 124

Query: 123 VCTQRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFK 182
              + S  RP+GV LL+ G DE+G  LYY  PSG +++  A AIGS S+ A + L+ +F 
Sbjct: 125 EGEEESMSRPFGVSLLIAGHDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQFN 184

Query: 183 NFQDSSRDDLIKDALTATRETLQGEKLTSSICTIAILGVGEPFHILDRETVQNLI 233
             +D S  +    A++  ++ ++ EK+T +   + I  V   +H+   + V+ +I
Sbjct: 185 --KDLSLQEAETIAVSILKQVME-EKVTPN--NVDIAKVAPAYHLYTPQEVEAVI 234

[Close]

BLAST of Sed0027223 vs. TAIR 10
Match: AT3G14290.1 (20S proteasome alpha subunit E2 )

HSP 1 Score: 151.0 bits (380), Expect = 1.4e-36
Identity = 91/235 (38.72%), Postives = 136/235 (57.87%), Query Frame = 0


Query: 3   RNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSNSHVVLACVNKANSEL--SSHQ 62
           R +YD  V T+SP GRLFQVEYA+EA+K GS AIG+++   VVLA   +  S L   S  
Sbjct: 5   RTEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGVKTKEGVVLAVEKRITSPLLEPSSV 64

Query: 63  KKIFKVDDHIGLAISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKA---Q 122
           +KI ++DDHIG A+SGL AD R L  + R E  N+ ++Y  P+ V      L D A    
Sbjct: 65  EKIMEIDDHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFG 124

Query: 123 VCTQRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFK 182
              + S  RP+GV LL+ G DE+G  LYY  PSG +++  A AIGS S+ A + L+ +F 
Sbjct: 125 EGEEESMSRPFGVSLLIAGHDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQFN 184

Query: 183 NFQDSSRDDLIKDALTATRETLQGEKLTSSICTIAILGVGEPFHILDRETVQNLI 233
             +D +  +    A++  ++ ++ EK+T +   + I  V   +H+   + V+ +I
Sbjct: 185 --KDITLQEAETIAVSILKQVME-EKVTPN--NVDIAKVAPAYHLYTPQEVEAVI 234

The following BLAST results are available for this feature:

BLAST of Sed0027223 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008444739.1	1.5e-147	94.68	PREDICTED: proteasome subunit alpha type-1-B-like [Cucumis melo] >KAA0065218.1 p...	[more]
XP_004152689.1	4.2e-147	94.33	proteasome subunit alpha type-1-B [Cucumis sativus] >KGN62618.1 hypothetical pro...	[more]
XP_023546840.1	7.2e-147	93.97	proteasome subunit alpha type-1-B-like [Cucurbita pepo subsp. pepo]	[more]
XP_022951677.1	8.0e-146	93.26	proteasome subunit alpha type-1-B-like [Cucurbita moschata] >XP_023538349.1 prot...	[more]
XP_022961863.1	1.8e-145	93.64	proteasome subunit alpha type-1-B-like [Cucurbita moschata]	[more]

BLAST of Sed0027223 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O23712	5.8e-123	78.37	Proteasome subunit alpha type-1-B OS=Arabidopsis thaliana OX=3702 GN=PAF2 PE=1 S...	[more]
P34066	1.9e-121	79.08	Proteasome subunit alpha type-1-A OS=Arabidopsis thaliana OX=3702 GN=PAF1 PE=1 S...	[more]
P52428	5.1e-103	70.50	Proteasome subunit alpha type-1 OS=Oryza sativa subsp. japonica OX=39947 GN=PAF1...	[more]
Q27562	2.7e-72	54.51	Proteasome subunit alpha type-1 OS=Dictyostelium discoideum OX=44689 GN=psmA1 PE...	[more]
Q9R1P4	1.8e-68	52.32	Proteasome subunit alpha type-1 OS=Mus musculus OX=10090 GN=Psma1 PE=1 SV=1	[more]

BLAST of Sed0027223 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VC66	7.0e-148	94.68	Proteasome subunit alpha type OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc...	[more]
A0A1S3BBW8	7.0e-148	94.68	Proteasome subunit alpha type OS=Cucumis melo OX=3656 GN=LOC103487987 PE=3 SV=1	[more]
A0A0A0LLH5	2.0e-147	94.33	Proteasome subunit alpha type OS=Cucumis sativus OX=3659 GN=Csa_2G361820 PE=3 SV...	[more]
A0A6J1GIC0	3.9e-146	93.26	Proteasome subunit alpha type OS=Cucurbita moschata OX=3662 GN=LOC111454419 PE=3...	[more]
A0A6J1HD20	8.6e-146	93.64	Proteasome subunit alpha type OS=Cucurbita moschata OX=3662 GN=LOC111462503 PE=3...	[more]

BLAST of Sed0027223 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G47250.1	4.1e-124	78.37	20S proteasome alpha subunit F2	[more]
AT5G42790.1	1.3e-122	79.08	proteasome alpha subunit F1	[more]
AT1G53850.1	6.5e-37	39.15	20S proteasome alpha subunit E1	[more]
AT1G53850.2	6.5e-37	39.15	20S proteasome alpha subunit E1	[more]
AT3G14290.1	1.4e-36	38.72	20S proteasome alpha subunit E2	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000426	Proteasome alpha-subunit, N-terminal domain	SMART	SM00948	Proteasome_A_N_2	coord: 6..28 e-value: 4.5E-10 score: 49.5
IPR000426	Proteasome alpha-subunit, N-terminal domain	PFAM	PF10584	Proteasome_A_N	coord: 6..28 e-value: 6.8E-14 score: 51.2
IPR000426	Proteasome alpha-subunit, N-terminal domain	PROSITE	PS00388	PROTEASOME_ALPHA_1	coord: 6..28
IPR001353	Proteasome, subunit alpha/beta	PFAM	PF00227	Proteasome	coord: 29..213 e-value: 2.5E-57 score: 193.4
IPR029055	Nucleophile aminohydrolases, N-terminal	GENE3D	3.60.20.10	Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1	coord: 1..236 e-value: 1.1E-84 score: 285.5
IPR029055	Nucleophile aminohydrolases, N-terminal	SUPERFAMILY	56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)	coord: 4..235
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 244..282
None	No IPR available	PANTHER	PTHR11599	PROTEASOME SUBUNIT ALPHA/BETA	coord: 1..272
None	No IPR available	PANTHER	PTHR11599:SF182	PROTEASOME SUBUNIT ALPHA TYPE	coord: 1..272
IPR023332	Proteasome alpha-type subunit	PROSITE	PS51475	PROTEASOME_ALPHA_2	coord: 21..232 score: 75.505737
IPR035144	Proteasome subunit alpha 1	CDD	cd03749	proteasome_alpha_type_1	coord: 6..215 e-value: 4.15997E-143 score: 398.972

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0027223.1	Sed0027223.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010498	proteasomal protein catabolic process
biological_process	GO:0006511	ubiquitin-dependent protein catabolic process
biological_process	GO:0051603	proteolysis involved in cellular protein catabolic process
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
cellular_component	GO:0019773	proteasome core complex, alpha-subunit complex
cellular_component	GO:0005839	proteasome core complex