Sed0027097 (gene) Chayote v1

Overview


Name	Sed0027097
Type	gene
Organism	Sechium edule (Chayote v1)
Description	40S ribosomal protein S3a
Location	LG12: 5973757 .. 5976739 (-)
RNA-Seq Expression	Sed0027097
Synteny	Sed0027097

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AATTATTTAAAAGAAAATAAATGTTGTAGAAAAATATTTAAAAAACAAAAAAGCTGATTTTATATAAACGCAGGTTTTAGGGTTTTGGAAGCTCTGGAACTTTTTCTGCCGTGCATCATAACATCGGAGCAGAGTTAGGGCAACTCAAAGTCCTTCAGCCATGGCCGTCGGGTATGATTTCTCACTTTCCGATTGATTTCAATTTTACGCTGTATTTTTGGTTTCATTTCTCATACTCGTTTTCTGTTCTATCAGTAAGAACAAGCGGATTTCGAAGGGAAAGAAGGGAGGCAAGAAGAAAGCGTAAGTATCTTGATCTTCTCTCCGCTCTCAGTTGTGCTGTTGGATTTCTTTTTATGCATTTTTTGTTTGATTTTCTCTCAGCACCGATCCATTTGCCAAGAAGGATTGGTATGATATCAAGGCGCCTTCTGTTTTCACTGTTAAGAATGTGGGAAAGACTCTTGTTACGCGTACGCAGGGTACCAAGGTAAATGTGATCCTGTTCTAATTGTGTTTGCTGTTTTTATGGATAATGGGATTCAGAGTTGGGAGAAATTTAGTTGTGTTTGTGTAATCTTAGAGGCATTGTTGGATTTGATTGATATTAGACGGGGGGTTTTCGCCTTCTTAACCCCCTTGTTGAGAAAAGTCTCCCAGGGGCAGCCTCCTTGGTTGAGGCTTGGGGACGAGGTCTAGGTTCGAGAGGCACGACTTGAGCTTAATTGTAAAATTACTTGTTGTCTCCTGAGTGTGGGCTGGCCTTGAAACGAGTGGAGGTGCCCCAGGTTATATGGGAGTGGAGCTCCGATTCCCGGTCATAAAAAAAAGCCCCCTTGTTGGGAAATTAAGTTGTGGAACCTCTACTTTTGGAACAGAATTTAAATCTGCTGGGCTTATAGTATTAGGGATGCTACCGTTCTTCAAGCTTTTGCTTTTTATAATTTTGTATTGATGGTTTTCCTGGGCTGGAACGTTTGAAAGCTGAGAAAAAAAGATTGGATTTTATGTTTTCTAGATGTTGTGTAATGTCATTTGCAACCTGGCTAAATTCCTTGGAGTTCCGTTAGTCATATGATGTAGTAGTGTTTTAGACCTAGTTTTTTTTTGGTTTTGTATTATGTGAATGTTAAGTTTTCTTTGTTGCTCTCAATAGATTGCTTCTGAAGGACTCAAGCATAGAGTCTTCGAAGTCTCGTTGGCTGATCTTCAGAATGATGAGGAGCACGCATACAGGAAGATTCGGTTGAGAGCAGAAGATGTTCAAGGGAGGAATGTCCTGACAAATTTCTGGGTGAGATGAGATTTCCTATTTACTATATAGTTGTATTCTCGTTGTAGTTTGTTCCCTGCATTTTGATCATAATTTTCTTAATTGTATAAATTTTAAGGGAATGAACTTCACTACCGACAAGTTGAGGTCTTTAGTACGCAAGTGGCATACTTTGATTGAAGCTCATGTAGATGTCAAAACCACAGATAACTACACCCTTAGAATGTTTTGCATTGGGTTCACTAAGAGAAGGCCAAACCAGGTGAAAAGGACCTGCTATGCACAGTCCAGCCAGATCAGGCAGGTTAGTTCATAGGACTGCAGTGAAGTATTTTTTATATTGTAAAACTAGATTAAAATTTTTATGCCAATTATGACAAAATTTACTTCAACTGGTCTATTTCTTATAGTATTTGATTTGTTAGAAGCAGCTGCCATATTCATTGGTTAGCACGGTGTGAAGTTTTCACTAAATCTTCTCTGTGCCAATATCTTTTTTACATGACAGATCCGACGCAAGATGAGGGAAATCATGGTAAACCAAGCATCCTCTTGTGATTTGAAGGAATTGGTTCGCAAGTTCATTCCAGAGTCGATTGGAAAGGAGATTGAAAAGGCAACATCCAGCATCTACCCTCTTCAAAATGTGTTTATCCGGAAAGTTAAAATTTTGAAAGCTCCCAAATTTGATCTTGGGAAGTTGATGGAGGTATTCATCTAGTTTGTTTCTCATTCACTTTTAATACTTTGAAACTGATCCAGAACCTATAAACTATTTCAGACTTGGGAGTCTTATGTTTTTCATCCTTATACTACCCTTCATTTATTGCTTTTGTTGGTGTGTTTGTAGGTTCATGGCGACTACTCAGAAGACGTTGGAGTGAAGGTTGAGAGACCAGCAGATGAAGCCGAGGCAGAGGCCCCTACTGAAATAGTTGGAGCTTGAGTTCAGTTATGTTGAATTTTTCTTTTGAGCTGGATTAATTTATTGTAGTTTAATTTTACCCCCCTTTGTTTACGAACTCAGTTTTAACCCGCATCTCGATATAGTCGAGCAATTTTGCGGTACAAGTCCTTTGTCAAGAATACTATCATTGAATTAATTTAGGAAATTGCACTGTTTTTAACCTAGCATGTTTGACATGTCACTTCTTTCGATTTTTTCTCGAATCGATGGGAATAGGGCACCCACCTGCTGTGTATTATAAAATGCTAAACAAGCATGTCTTGCATTTGGTCAAGAAAATTTGTATGTGCTTGTTAGGGGTAGAAATCTAAGTTTCAACCCTTTTCGTTATGCACTTGGGCTCGAAATTCCTTTGGCTCATTAATAAAAAACCAAAGTTATAAATAAGACCATGGAATTGAAACATTGGAACAAAACTGTGCAAGGGGGAATTGGAGTGAAGCAGCATTTTCAAACTCTGCCAACTGGGAGGATTGGAAATGTAGCGTGTGACATCAAACTTGTTTTGTCCCCAAGGAGTGGCGTATTGGTGGAAGGTTCTCTGCAATGGTGGAAGATTTGGACATTAAAGGTGTGTGCTCTCCCCAAGATTTTAGGTTTGAGACTTACCCGTGACATTAATGTGTAGACATTTCTCGTATGGACATTCCTTTGATAAGTTTATCGAAACTCAAATTTCCTGGTTTCTAAAATAAAAATAAGAACATCAAACTTATTTCCTACCTAGCTAAAAAGTACCAGAC

mRNA sequence

AATTATTTAAAAGAAAATAAATGTTGTAGAAAAATATTTAAAAAACAAAAAAGCTGATTTTATATAAACGCAGGTTTTAGGGTTTTGGAAGCTCTGGAACTTTTTCTGCCGTGCATCATAACATCGGAGCAGAGTTAGGGCAACTCAAAGTCCTTCAGCCATGGCCGTCGGTAAGAACAAGCGGATTTCGAAGGGAAAGAAGGGAGGCAAGAAGAAAGCCACCGATCCATTTGCCAAGAAGGATTGGTATGATATCAAGGCGCCTTCTGTTTTCACTGTTAAGAATGTGGGAAAGACTCTTGTTACGCGTACGCAGGGTACCAAGATTGCTTCTGAAGGACTCAAGCATAGAGTCTTCGAAGTCTCGTTGGCTGATCTTCAGAATGATGAGGAGCACGCATACAGGAAGATTCGGTTGAGAGCAGAAGATGTTCAAGGGAGGAATGTCCTGACAAATTTCTGGGGAATGAACTTCACTACCGACAAGTTGAGGTCTTTAGTACGCAAGTGGCATACTTTGATTGAAGCTCATGTAGATGTCAAAACCACAGATAACTACACCCTTAGAATGTTTTGCATTGGGTTCACTAAGAGAAGGCCAAACCAGGTGAAAAGGACCTGCTATGCACAGTCCAGCCAGATCAGGCAGATCCGACGCAAGATGAGGGAAATCATGGTAAACCAAGCATCCTCTTGTGATTTGAAGGAATTGGTTCGCAAGTTCATTCCAGAGTCGATTGGAAAGGAGATTGAAAAGGCAACATCCAGCATCTACCCTCTTCAAAATGTGTTTATCCGGAAAGTTAAAATTTTGAAAGCTCCCAAATTTGATCTTGGGAAGTTGATGGAGGTTCATGGCGACTACTCAGAAGACGTTGGAGTGAAGGTTGAGAGACCAGCAGATGAAGCCGAGGCAGAGGCCCCTACTGAAATAGTTGGAGCTTGAGTTCAGTTATGTTGAATTTTTCTTTTGAGCTGGATTAATTTATTGTAGTTTAATTTTACCCCCCTTTGTTTACGAACTCAGTTTTAACCCGCATCTCGATATAGTCGAGCAATTTTGCGGTACAAGTCCTTTGTCAAGAATACTATCATTGAATTAATTTAGGAAATTGCACTGTTTTTAACCTAGCATGTTTGACATGTCACTTCTTTCGATTTTTTCTCGAATCGATGGGAATAGGGCACCCACCTGCTGTGTATTATAAAATGCTAAACAAGCATGTCTTGCATTTGGTCAAGAAAATTTGTATGTGCTTGTTAGGGGTAGAAATCTAAGTTTCAACCCTTTTCGTTATGCACTTGGGCTCGAAATTCCTTTGGCTCATTAATAAAAAACCAAAGTTATAAATAAGACCATGGAATTGAAACATTGGAACAAAACTGTGCAAGGGGGAATTGGAGTGAAGCAGCATTTTCAAACTCTGCCAACTGGGAGGATTGGAAATGTAGCGTGTGACATCAAACTTGTTTTGTCCCCAAGGAGTGGCGTATTGGTGGAAGGTTCTCTGCAATGGTGGAAGATTTGGACATTAAAGGTGTGTGCTCTCCCCAAGATTTTAGGTTTGAGACTTACCCGTGACATTAATGTGTAGACATTTCTCGTATGGACATTCCTTTGATAAGTTTATCGAAACTCAAATTTCCTGGTTTCTAAAATAAAAATAAGAACATCAAACTTATTTCCTACCTAGCTAAAAAGTACCAGAC

Coding sequence (CDS)

ATGGCCGTCGGTAAGAACAAGCGGATTTCGAAGGGAAAGAAGGGAGGCAAGAAGAAAGCCACCGATCCATTTGCCAAGAAGGATTGGTATGATATCAAGGCGCCTTCTGTTTTCACTGTTAAGAATGTGGGAAAGACTCTTGTTACGCGTACGCAGGGTACCAAGATTGCTTCTGAAGGACTCAAGCATAGAGTCTTCGAAGTCTCGTTGGCTGATCTTCAGAATGATGAGGAGCACGCATACAGGAAGATTCGGTTGAGAGCAGAAGATGTTCAAGGGAGGAATGTCCTGACAAATTTCTGGGGAATGAACTTCACTACCGACAAGTTGAGGTCTTTAGTACGCAAGTGGCATACTTTGATTGAAGCTCATGTAGATGTCAAAACCACAGATAACTACACCCTTAGAATGTTTTGCATTGGGTTCACTAAGAGAAGGCCAAACCAGGTGAAAAGGACCTGCTATGCACAGTCCAGCCAGATCAGGCAGATCCGACGCAAGATGAGGGAAATCATGGTAAACCAAGCATCCTCTTGTGATTTGAAGGAATTGGTTCGCAAGTTCATTCCAGAGTCGATTGGAAAGGAGATTGAAAAGGCAACATCCAGCATCTACCCTCTTCAAAATGTGTTTATCCGGAAAGTTAAAATTTTGAAAGCTCCCAAATTTGATCTTGGGAAGTTGATGGAGGTTCATGGCGACTACTCAGAAGACGTTGGAGTGAAGGTTGAGAGACCAGCAGATGAAGCCGAGGCAGAGGCCCCTACTGAAATAGTTGGAGCTTGA

Protein sequence

MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQNDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQASSCDLKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVERPADEAEAEAPTEIVGA

Homology

[Close]

BLAST of Sed0027097 vs. NCBI nr
Match: XP_022974423.1 (40S ribosomal protein S3a isoform X1 [Cucurbita maxima] >XP_022974424.1 40S ribosomal protein S3a isoform X2 [Cucurbita maxima] >XP_023539944.1 40S ribosomal protein S3a [Cucurbita pepo subsp. pepo] >KAG6597426.1 hypothetical protein SDJN03_10606, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 503.8 bits (1296), Expect = 8.7e-139
Identity = 256/261 (98.08%), Postives = 258/261 (98.85%), Query Frame = 0


Query: 1   MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEG 60
           MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEG
Sbjct: 1   MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEG 60

Query: 61  LKHRVFEVSLADLQNDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL 120
           LKHRVFEVSLADLQ+DEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL
Sbjct: 61  LKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL 120

Query: 121 IEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQASSCD 180
           IEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQA+SCD
Sbjct: 121 IEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCD 180

Query: 181 LKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG 240
           LKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG
Sbjct: 181 LKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG 240

Query: 241 VKVERPADEAEAEAPTEIVGA 262
           VKVERPADEA  E PTEIVGA
Sbjct: 241 VKVERPADEAADEGPTEIVGA 261

[Close]

BLAST of Sed0027097 vs. NCBI nr
Match: XP_022979234.1 (40S ribosomal protein S3a-like [Cucurbita maxima])

HSP 1 Score: 503.4 bits (1295), Expect = 1.1e-138
Identity = 256/261 (98.08%), Postives = 258/261 (98.85%), Query Frame = 0


Query: 1   MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEG 60
           MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEG
Sbjct: 1   MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEG 60

Query: 61  LKHRVFEVSLADLQNDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL 120
           LKHRVFEVSLADLQ+DEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL
Sbjct: 61  LKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL 120

Query: 121 IEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQASSCD 180
           IEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQASSCD
Sbjct: 121 IEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQASSCD 180

Query: 181 LKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG 240
           LKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG
Sbjct: 181 LKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG 240

Query: 241 VKVERPADEAEAEAPTEIVGA 262
           VKVERPADEA AE  TE+VGA
Sbjct: 241 VKVERPADEAAAEEATEVVGA 261

[Close]

BLAST of Sed0027097 vs. NCBI nr
Match: XP_023527182.1 (40S ribosomal protein S3a-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 502.3 bits (1292), Expect = 2.5e-138
Identity = 255/261 (97.70%), Postives = 258/261 (98.85%), Query Frame = 0


Query: 1   MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEG 60
           MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEG
Sbjct: 1   MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEG 60

Query: 61  LKHRVFEVSLADLQNDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL 120
           LKHRVFEVSLADLQ+DEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL
Sbjct: 61  LKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL 120

Query: 121 IEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQASSCD 180
           IEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQA+SCD
Sbjct: 121 IEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQAASCD 180

Query: 181 LKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG 240
           LKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG
Sbjct: 181 LKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG 240

Query: 241 VKVERPADEAEAEAPTEIVGA 262
           VKVERPADEA AE  TE+VGA
Sbjct: 241 VKVERPADEAAAEEATEVVGA 261

[Close]

BLAST of Sed0027097 vs. NCBI nr
Match: XP_038875051.1 (40S ribosomal protein S3a [Benincasa hispida])

HSP 1 Score: 501.9 bits (1291), Expect = 3.3e-138
Identity = 254/261 (97.32%), Postives = 257/261 (98.47%), Query Frame = 0


Query: 1   MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEG 60
           MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEG
Sbjct: 1   MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEG 60

Query: 61  LKHRVFEVSLADLQNDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL 120
           LKHRVFE+SLADLQ+DEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL
Sbjct: 61  LKHRVFEISLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL 120

Query: 121 IEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQASSCD 180
           IEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIM+NQASSCD
Sbjct: 121 IEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMINQASSCD 180

Query: 181 LKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG 240
           LKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG
Sbjct: 181 LKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG 240

Query: 241 VKVERPADEAEAEAPTEIVGA 262
           VKVERPADEA  E  TEIVGA
Sbjct: 241 VKVERPADEAAVEGATEIVGA 261

[Close]

BLAST of Sed0027097 vs. NCBI nr
Match: XP_008438626.1 (PREDICTED: 40S ribosomal protein S3a [Cucumis melo])

HSP 1 Score: 501.5 bits (1290), Expect = 4.3e-138
Identity = 254/261 (97.32%), Postives = 256/261 (98.08%), Query Frame = 0


Query: 1   MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEG 60
           MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEG
Sbjct: 1   MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEG 60

Query: 61  LKHRVFEVSLADLQNDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL 120
           LKHRVFE+SLADLQ DEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL
Sbjct: 61  LKHRVFEISLADLQEDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL 120

Query: 121 IEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQASSCD 180
           IEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQASSCD
Sbjct: 121 IEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQASSCD 180

Query: 181 LKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG 240
           LKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG
Sbjct: 181 LKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG 240

Query: 241 VKVERPADEAEAEAPTEIVGA 262
           VKVERPADEA  E  TE+VGA
Sbjct: 241 VKVERPADEAAVEGATEVVGA 261

[Close]

BLAST of Sed0027097 vs. ExPASy Swiss-Prot
Match: Q8GTE3 (40S ribosomal protein S3a OS=Cicer arietinum OX=3827 PE=2 SV=1)

HSP 1 Score: 464.5 bits (1194), Expect = 7.7e-130
Identity = 236/261 (90.42%), Postives = 247/261 (94.64%), Query Frame = 0


Query: 1   MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEG 60
           MAVGKNKRISKGKKGGKKKA DPF+KKDWYDIKAPSVF VKNVGKTLV+RTQGTKIASEG
Sbjct: 1   MAVGKNKRISKGKKGGKKKAADPFSKKDWYDIKAPSVFQVKNVGKTLVSRTQGTKIASEG 60

Query: 61  LKHRVFEVSLADLQNDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL 120
           LKHRVFE+SLADLQ DE++A+RKIRLRAEDVQG+NVLTNF+GM+FTTDKLRSLVRKW TL
Sbjct: 61  LKHRVFEISLADLQGDEDNAFRKIRLRAEDVQGKNVLTNFYGMDFTTDKLRSLVRKWQTL 120

Query: 121 IEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQASSCD 180
           IEAHVDVKTTDNYTLRMFCIGFTKRR NQVKRTCYAQSSQIRQIRRKMREIMVNQA+SCD
Sbjct: 121 IEAHVDVKTTDNYTLRMFCIGFTKRRSNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCD 180

Query: 181 LKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG 240
           LKELVRKFIPE IGKEIEKATSSIYPLQNVFIRKVKILK+PKFDLGKLMEVHGDYSEDVG
Sbjct: 181 LKELVRKFIPEMIGKEIEKATSSIYPLQNVFIRKVKILKSPKFDLGKLMEVHGDYSEDVG 240

Query: 241 VKVERPADEAEAEAPTEIVGA 262
            KVE PADE   E   EIVGA
Sbjct: 241 TKVESPADETVVEGTPEIVGA 261

[Close]

BLAST of Sed0027097 vs. ExPASy Swiss-Prot
Match: A5B4K1 (40S ribosomal protein S3a-1 OS=Vitis vinifera OX=29760 GN=GSVIVT00020038001 PE=3 SV=1)

HSP 1 Score: 460.3 bits (1183), Expect = 1.5e-128
Identity = 231/261 (88.51%), Postives = 246/261 (94.25%), Query Frame = 0


Query: 1   MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEG 60
           MAVGKNKRISKGKKGGKKKA DPFAKKDWYDIKAPSVF V+NVGKTLV+RTQGTKIASEG
Sbjct: 1   MAVGKNKRISKGKKGGKKKAADPFAKKDWYDIKAPSVFEVRNVGKTLVSRTQGTKIASEG 60

Query: 61  LKHRVFEVSLADLQNDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL 120
           LKHRVFE+SLADLQ DE+ AYRKIRLRAEDVQGRNVLTNFWGM+FTTDKLRSLVRKW TL
Sbjct: 61  LKHRVFEISLADLQADEDQAYRKIRLRAEDVQGRNVLTNFWGMDFTTDKLRSLVRKWQTL 120

Query: 121 IEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQASSCD 180
           IEAHVDVKTTDNYTLR+FCI FTK+R NQ K+TCYAQSSQIRQIRRKMREIM N A+SCD
Sbjct: 121 IEAHVDVKTTDNYTLRLFCIAFTKKRVNQNKKTCYAQSSQIRQIRRKMREIMTNMATSCD 180

Query: 181 LKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG 240
           LKELV+KFIPESIG+EIEKATSSIYPLQNV+IRKVKILKAPKFDLGKLMEVHGDYSEDVG
Sbjct: 181 LKELVKKFIPESIGREIEKATSSIYPLQNVYIRKVKILKAPKFDLGKLMEVHGDYSEDVG 240

Query: 241 VKVERPADEAEAEAPTEIVGA 262
            K+ERPADE  AE  TE++GA
Sbjct: 241 TKLERPADEPVAEGVTEVIGA 261

[Close]

BLAST of Sed0027097 vs. ExPASy Swiss-Prot
Match: P49198 (40S ribosomal protein S3a OS=Helianthus annuus OX=4232 GN=RPS3A PE=2 SV=2)

HSP 1 Score: 458.4 bits (1178), Expect = 5.5e-128
Identity = 229/261 (87.74%), Postives = 250/261 (95.79%), Query Frame = 0


Query: 1   MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEG 60
           MAVGKNKRISKGKKGGKKKA DPF+KKDWYDIKAPS+F  +NVGKTLVTRTQGTKIASEG
Sbjct: 1   MAVGKNKRISKGKKGGKKKAADPFSKKDWYDIKAPSLFITRNVGKTLVTRTQGTKIASEG 60

Query: 61  LKHRVFEVSLADLQNDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL 120
           LKHRVFEVSLADLQNDE+H+YRKIRLRAEDVQG+NVLTNFWGM+ TTDKLRSLV+KW +L
Sbjct: 61  LKHRVFEVSLADLQNDEDHSYRKIRLRAEDVQGKNVLTNFWGMDVTTDKLRSLVKKWQSL 120

Query: 121 IEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQASSCD 180
           IEAHVDVKTTDN+TLRMFCIGFTK+R NQVKRTCYAQSSQI+QIRRKMREIMV QA +CD
Sbjct: 121 IEAHVDVKTTDNFTLRMFCIGFTKKRANQVKRTCYAQSSQIKQIRRKMREIMVTQAQTCD 180

Query: 181 LKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG 240
           LKELV+KFIPESIG+EIEKATSSIYPLQNVFIRKVKILKAPKFD+GKLMEVHGDYSEDVG
Sbjct: 181 LKELVQKFIPESIGREIEKATSSIYPLQNVFIRKVKILKAPKFDIGKLMEVHGDYSEDVG 240

Query: 241 VKVERPADEAEAEAPTEIVGA 262
           VK++RPA+EA  EA TE++GA
Sbjct: 241 VKLDRPAEEAAPEA-TEVIGA 260

[Close]

BLAST of Sed0027097 vs. ExPASy Swiss-Prot
Match: P33444 (40S ribosomal protein S3a OS=Catharanthus roseus OX=4058 GN=RPS3A PE=2 SV=4)

HSP 1 Score: 457.2 bits (1175), Expect = 1.2e-127
Identity = 229/262 (87.40%), Postives = 252/262 (96.18%), Query Frame = 0


Query: 1   MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEG 60
           MAVGKNKRISKGKKGGKKKA DPFAKKDWYDIKAPSVF+V+NVGKTLVTRTQGTKIASEG
Sbjct: 1   MAVGKNKRISKGKKGGKKKAADPFAKKDWYDIKAPSVFSVRNVGKTLVTRTQGTKIASEG 60

Query: 61  LKHRVFEVSLADLQNDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL 120
           L+HRVFE+SLADLQ DE+H++RKIRLRAED+QG+NVLTNFWGM+FTTDKLRSLVRKW +L
Sbjct: 61  LEHRVFEISLADLQGDEDHSFRKIRLRAEDIQGKNVLTNFWGMDFTTDKLRSLVRKWQSL 120

Query: 121 IEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQASSCD 180
           IEAHVDVKTTD+YTLRMFCIGFTK+R NQ KRTCYAQSSQIRQIRRKMREIMVNQA SCD
Sbjct: 121 IEAHVDVKTTDSYTLRMFCIGFTKKRANQQKRTCYAQSSQIRQIRRKMREIMVNQAQSCD 180

Query: 181 LKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSE-DV 240
           LK+LV+KFIPESIG+EIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDY+E D+
Sbjct: 181 LKDLVQKFIPESIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYNEDDI 240

Query: 241 GVKVERPADEAEAEAPTEIVGA 262
           G K++RPA+EA AE PTE++GA
Sbjct: 241 GTKLDRPAEEAVAE-PTEVIGA 261

[Close]

BLAST of Sed0027097 vs. ExPASy Swiss-Prot
Match: Q285L8 (40S ribosomal protein S3a OS=Nicotiana tabacum OX=4097 GN=cyc07 PE=2 SV=1)

HSP 1 Score: 456.1 bits (1172), Expect = 2.7e-127
Identity = 230/261 (88.12%), Postives = 246/261 (94.25%), Query Frame = 0


Query: 1   MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEG 60
           MAVGKNKRISKGKKGGKKKA DP+AKKDWYDIKAPSVF +KNVGKTLVTRTQGTKIASEG
Sbjct: 1   MAVGKNKRISKGKKGGKKKAADPYAKKDWYDIKAPSVFDIKNVGKTLVTRTQGTKIASEG 60

Query: 61  LKHRVFEVSLADLQNDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL 120
           LKHRVFEVSLADLQ DE+ ++RKIRLRAEDVQG+NVLTNFWGM+FTTDKLRSLV+KW TL
Sbjct: 61  LKHRVFEVSLADLQKDEDQSFRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVKKWQTL 120

Query: 121 IEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQASSCD 180
           IEAHVDVKTTD+YTLRMFCI FTK+RPNQ KRTCYAQSSQIRQIRRKM EIM NQASSCD
Sbjct: 121 IEAHVDVKTTDSYTLRMFCIAFTKKRPNQQKRTCYAQSSQIRQIRRKMVEIMRNQASSCD 180

Query: 181 LKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG 240
           LKELV KFIPESIG+EIEKATSSI+PLQNV+IRKVKILKAPKFD+GKLMEVHGDYSEDVG
Sbjct: 181 LKELVAKFIPESIGREIEKATSSIFPLQNVYIRKVKILKAPKFDIGKLMEVHGDYSEDVG 240

Query: 241 VKVERPADEAEAEAPTEIVGA 262
           VK++RPADE  AEA  EI GA
Sbjct: 241 VKLDRPADETVAEAEPEIPGA 261

[Close]

BLAST of Sed0027097 vs. ExPASy TrEMBL
Match: A0A6J1IG66 (40S ribosomal protein S3a OS=Cucurbita maxima OX=3661 GN=LOC111473093 PE=3 SV=1)

HSP 1 Score: 503.8 bits (1296), Expect = 4.2e-139
Identity = 256/261 (98.08%), Postives = 258/261 (98.85%), Query Frame = 0


Query: 1   MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEG 60
           MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEG
Sbjct: 1   MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEG 60

Query: 61  LKHRVFEVSLADLQNDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL 120
           LKHRVFEVSLADLQ+DEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL
Sbjct: 61  LKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL 120

Query: 121 IEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQASSCD 180
           IEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQA+SCD
Sbjct: 121 IEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCD 180

Query: 181 LKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG 240
           LKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG
Sbjct: 181 LKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG 240

Query: 241 VKVERPADEAEAEAPTEIVGA 262
           VKVERPADEA  E PTEIVGA
Sbjct: 241 VKVERPADEAADEGPTEIVGA 261

[Close]

BLAST of Sed0027097 vs. ExPASy TrEMBL
Match: A0A6J1IW45 (40S ribosomal protein S3a OS=Cucurbita maxima OX=3661 GN=LOC111479024 PE=3 SV=1)

HSP 1 Score: 503.4 bits (1295), Expect = 5.5e-139
Identity = 256/261 (98.08%), Postives = 258/261 (98.85%), Query Frame = 0


Query: 1   MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEG 60
           MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEG
Sbjct: 1   MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEG 60

Query: 61  LKHRVFEVSLADLQNDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL 120
           LKHRVFEVSLADLQ+DEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL
Sbjct: 61  LKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL 120

Query: 121 IEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQASSCD 180
           IEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQASSCD
Sbjct: 121 IEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQASSCD 180

Query: 181 LKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG 240
           LKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG
Sbjct: 181 LKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG 240

Query: 241 VKVERPADEAEAEAPTEIVGA 262
           VKVERPADEA AE  TE+VGA
Sbjct: 241 VKVERPADEAAAEEATEVVGA 261

[Close]

BLAST of Sed0027097 vs. ExPASy TrEMBL
Match: A0A6J1G8R6 (40S ribosomal protein S3a OS=Cucurbita moschata OX=3662 GN=LOC111451931 PE=3 SV=1)

HSP 1 Score: 501.5 bits (1290), Expect = 2.1e-138
Identity = 255/261 (97.70%), Postives = 257/261 (98.47%), Query Frame = 0


Query: 1   MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEG 60
           MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEG
Sbjct: 1   MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEG 60

Query: 61  LKHRVFEVSLADLQNDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL 120
           LKHRVFEVSLADLQ+DEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL
Sbjct: 61  LKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL 120

Query: 121 IEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQASSCD 180
           IEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQA+SCD
Sbjct: 121 IEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCD 180

Query: 181 LKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG 240
           LKELVRKFIPE IGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG
Sbjct: 181 LKELVRKFIPEFIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG 240

Query: 241 VKVERPADEAEAEAPTEIVGA 262
           VKVERPADEA  E PTEIVGA
Sbjct: 241 VKVERPADEAADEGPTEIVGA 261

[Close]

BLAST of Sed0027097 vs. ExPASy TrEMBL
Match: A0A6J1GW62 (40S ribosomal protein S3a OS=Cucurbita moschata OX=3662 GN=LOC111457971 PE=3 SV=1)

HSP 1 Score: 501.5 bits (1290), Expect = 2.1e-138
Identity = 255/261 (97.70%), Postives = 258/261 (98.85%), Query Frame = 0


Query: 1   MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEG 60
           MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEG
Sbjct: 1   MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEG 60

Query: 61  LKHRVFEVSLADLQNDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL 120
           LKHRVFEVSLADLQ+DEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL
Sbjct: 61  LKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL 120

Query: 121 IEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQASSCD 180
           IEAHVDVKTTD+YTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQASSCD
Sbjct: 121 IEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQASSCD 180

Query: 181 LKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG 240
           LKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG
Sbjct: 181 LKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG 240

Query: 241 VKVERPADEAEAEAPTEIVGA 262
           VKVERPADEA AE  TE+VGA
Sbjct: 241 VKVERPADEAAAEEATEVVGA 261

[Close]

BLAST of Sed0027097 vs. ExPASy TrEMBL
Match: A0A1S3AXI4 (40S ribosomal protein S3a OS=Cucumis melo OX=3656 GN=LOC103483683 PE=3 SV=1)

HSP 1 Score: 501.5 bits (1290), Expect = 2.1e-138
Identity = 254/261 (97.32%), Postives = 256/261 (98.08%), Query Frame = 0


Query: 1   MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEG 60
           MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEG
Sbjct: 1   MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEG 60

Query: 61  LKHRVFEVSLADLQNDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL 120
           LKHRVFE+SLADLQ DEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL
Sbjct: 61  LKHRVFEISLADLQEDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL 120

Query: 121 IEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQASSCD 180
           IEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQASSCD
Sbjct: 121 IEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQASSCD 180

Query: 181 LKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG 240
           LKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG
Sbjct: 181 LKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG 240

Query: 241 VKVERPADEAEAEAPTEIVGA 262
           VKVERPADEA  E  TE+VGA
Sbjct: 241 VKVERPADEAAVEGATEVVGA 261

[Close]

BLAST of Sed0027097 vs. TAIR 10
Match: AT4G34670.1 (Ribosomal protein S3Ae )

HSP 1 Score: 450.7 bits (1158), Expect = 8.2e-127
Identity = 228/262 (87.02%), Postives = 243/262 (92.75%), Query Frame = 0


Query: 1   MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEG 60
           MAVGKNKRISKG+KGGKKKA DPF+KKDWYD+KAP  FT +NVGKTLV+RTQGTKIASEG
Sbjct: 1   MAVGKNKRISKGRKGGKKKAVDPFSKKDWYDVKAPGSFTNRNVGKTLVSRTQGTKIASEG 60

Query: 61  LKHRVFEVSLADLQNDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL 120
           LKHRVFEVSLADLQNDE++AYRKIRLRAEDVQGRNVLT FWGM+FTTDKLRSLV+KW TL
Sbjct: 61  LKHRVFEVSLADLQNDEDNAYRKIRLRAEDVQGRNVLTQFWGMDFTTDKLRSLVKKWQTL 120

Query: 121 IEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQASSCD 180
           IEAHVDVKTTD YTLRMFCI FTKRR NQVKRTCYAQSSQIRQIRRKM EIMV +ASSCD
Sbjct: 121 IEAHVDVKTTDGYTLRMFCIAFTKRRANQVKRTCYAQSSQIRQIRRKMSEIMVKEASSCD 180

Query: 181 LKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDY-SEDV 240
           LKELV KFIPE+IG+EIEKAT  IYPLQNVFIRKVKILKAPKFDLGKLMEVHGDY +EDV
Sbjct: 181 LKELVAKFIPEAIGREIEKATQGIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYTAEDV 240

Query: 241 GVKVERPADEAEAEAPTEIVGA 262
           GVKV+RPADE   E PTEI+GA
Sbjct: 241 GVKVDRPADETMVEEPTEIIGA 262

[Close]

BLAST of Sed0027097 vs. TAIR 10
Match: AT3G04840.1 (Ribosomal protein S3Ae )

HSP 1 Score: 448.7 bits (1153), Expect = 3.1e-126
Identity = 225/262 (85.88%), Postives = 245/262 (93.51%), Query Frame = 0


Query: 1   MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEG 60
           MAVGKNKRISKG+KGGKKKA DPF+KKDWYD+KAPS+FT +NVGKTLV+RTQGTKIASEG
Sbjct: 1   MAVGKNKRISKGRKGGKKKAVDPFSKKDWYDVKAPSIFTHRNVGKTLVSRTQGTKIASEG 60

Query: 61  LKHRVFEVSLADLQNDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL 120
           LKHRVFEVSLADLQ DE++AYRKIRLRAEDVQGRNVL  FWGM+FTTDKLRSLV+KW TL
Sbjct: 61  LKHRVFEVSLADLQGDEDNAYRKIRLRAEDVQGRNVLCQFWGMDFTTDKLRSLVKKWQTL 120

Query: 121 IEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQASSCD 180
           IEAHVDVKTTD+YTLR+FCI FTKRR NQVKRTCYAQSSQIRQIRRKMR+IMV +ASSCD
Sbjct: 121 IEAHVDVKTTDSYTLRLFCIAFTKRRANQVKRTCYAQSSQIRQIRRKMRDIMVREASSCD 180

Query: 181 LKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDV 240
           LK+LV KFIPE+IG+EIEKAT  IYPLQNVFIRKVKILKAPKFDLGKLM+VHGDYS EDV
Sbjct: 181 LKDLVAKFIPEAIGREIEKATQGIYPLQNVFIRKVKILKAPKFDLGKLMDVHGDYSAEDV 240

Query: 241 GVKVERPADEAEAEAPTEIVGA 262
           GVKV+RPADE   E PTEI+GA
Sbjct: 241 GVKVDRPADEMAVEEPTEIIGA 262

The following BLAST results are available for this feature:

BLAST of Sed0027097 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022974423.1	8.7e-139	98.08	40S ribosomal protein S3a isoform X1 [Cucurbita maxima] >XP_022974424.1 40S ribo...	[more]
XP_022979234.1	1.1e-138	98.08	40S ribosomal protein S3a-like [Cucurbita maxima]	[more]
XP_023527182.1	2.5e-138	97.70	40S ribosomal protein S3a-like [Cucurbita pepo subsp. pepo]	[more]
XP_038875051.1	3.3e-138	97.32	40S ribosomal protein S3a [Benincasa hispida]	[more]
XP_008438626.1	4.3e-138	97.32	PREDICTED: 40S ribosomal protein S3a [Cucumis melo]	[more]

BLAST of Sed0027097 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GTE3	7.7e-130	90.42	40S ribosomal protein S3a OS=Cicer arietinum OX=3827 PE=2 SV=1	[more]
A5B4K1	1.5e-128	88.51	40S ribosomal protein S3a-1 OS=Vitis vinifera OX=29760 GN=GSVIVT00020038001 PE=3...	[more]
P49198	5.5e-128	87.74	40S ribosomal protein S3a OS=Helianthus annuus OX=4232 GN=RPS3A PE=2 SV=2	[more]
P33444	1.2e-127	87.40	40S ribosomal protein S3a OS=Catharanthus roseus OX=4058 GN=RPS3A PE=2 SV=4	[more]
Q285L8	2.7e-127	88.12	40S ribosomal protein S3a OS=Nicotiana tabacum OX=4097 GN=cyc07 PE=2 SV=1	[more]

BLAST of Sed0027097 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IG66	4.2e-139	98.08	40S ribosomal protein S3a OS=Cucurbita maxima OX=3661 GN=LOC111473093 PE=3 SV=1	[more]
A0A6J1IW45	5.5e-139	98.08	40S ribosomal protein S3a OS=Cucurbita maxima OX=3661 GN=LOC111479024 PE=3 SV=1	[more]
A0A6J1G8R6	2.1e-138	97.70	40S ribosomal protein S3a OS=Cucurbita moschata OX=3662 GN=LOC111451931 PE=3 SV=...	[more]
A0A6J1GW62	2.1e-138	97.70	40S ribosomal protein S3a OS=Cucurbita moschata OX=3662 GN=LOC111457971 PE=3 SV=...	[more]
A0A1S3AXI4	2.1e-138	97.32	40S ribosomal protein S3a OS=Cucumis melo OX=3656 GN=LOC103483683 PE=3 SV=1	[more]

BLAST of Sed0027097 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G34670.1	8.2e-127	87.02	Ribosomal protein S3Ae	[more]
AT3G04840.1	3.1e-126	85.88	Ribosomal protein S3Ae	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001593	Ribosomal protein S3Ae	SMART	SM01397	Ribosomal_S3Ae_2	coord: 15..221 e-value: 2.2E-142 score: 489.0
IPR001593	Ribosomal protein S3Ae	PFAM	PF01015	Ribosomal_S3Ae	coord: 16..221 e-value: 1.9E-84 score: 282.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..15
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..21
None	No IPR available	PANTHER	PTHR11830:SF33	40S RIBOSOMAL PROTEIN S3A	coord: 1..261
None	No IPR available	PANTHER	PTHR11830	40S RIBOSOMAL PROTEIN S3A	coord: 1..261
IPR018281	Ribosomal protein S3Ae, conserved site	PROSITE	PS01191	RIBOSOMAL_S3AE	coord: 61..73
IPR027500	40S ribosomal protein S1/3, eukaryotes	HAMAP	MF_03122	Ribosomal_S3Ae_euk	coord: 1..258 score: 41.074677

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0027097.1	Sed0027097.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0022627	cytosolic small ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003735	structural constituent of ribosome