Sed0027053 (gene) Chayote v1

Overview


Name	Sed0027053
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Ubiquitin-like domain-containing protein
Location	LG04: 6800941 .. 6815097 (+)
RNA-Seq Expression	Sed0027053
Synteny	Sed0027053

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAATATTAGGACATGAGTTTCTATCTCACATTCCCATTGTTAATGAACTAAGTCCATTTTCTGTAATTTGCAGCTGTTGTTTGCCAGTTTAAAACATGCGTAGCTGAATCAAGTTTCGAAGGGTGATGAGAGAAGACGGAATCTCCCTTTCACCGCTCGCAGATCGCCGGAAGCCGTAGCCGAATCATCGTCTTTGCGATGGCGGAGATTGTTGAGGAGCTCAATCGCAATCGGAACTTTACCGGAGGTTCCAATCCCAGCATTAGCAATGGCGGTTCTTCGCAAAACTCAATCGAAATCATCGTTCGAACCATCGGCCCTGCGCGTCCCTCTCGCCTTCTCGTCTCGTCGCCAGTAATGGTACGGGAACCTTTCTTCTTCTTTAATCGCCGATTGATCTTGCTGTCTCTGTAAATTGAAACCTGCTGCTATCTATATCTATTGATTTTGATTTTTCAGGTGCGCGACTTGCGGAGCTTGGTCGCCGAGAGTTTTCAGTTACCTGTTGGCAATTTGAAGCTCATTTTGCGAGGAAATATTTTGGATGATTGTAAAAATGAGGATGATGTATTTGTGCGGCTCAATCATGGGGGTATATTTGCGGTATTCTGCTGATTGCATGTTATTTTGTTCTAGCATTGTCGTGGAACATACCATATGTTGTCTGGCTTTTTGCTCTAAGTGCGTGATCGGATGAAGAAACGAACTTATCGAATTGTTCCTGCTGTCTGTATTTCTTTGAAACTTGTTCTTTTGTTGGTGATGGTTGTCCTTTTAATGATTATGAATGCTTTAGCTTTCAAAATTCCATTGTGATTCAAGTTTCACCATACTAAATGCTATTTTCTCTCAACTGTCTAGGTTTTTGGACTTTCATTTCTCGTATGCCTGTAATTTTATTGTTTTTAATTCAACTATCTATGTTGCTATTTTGTTTATTGGTTGTAGCATTGAGTATTAGCTCATAAATCATGATTCCAGCTTATTGGCCATGTTTGTTATTTCATTGATTTGTCTTGTGTTGTTGGTGGTACTGGTTGCTTGTTGCATAATATAAGTTTTTTTTTTTTGTTTTACATGCTTTCTGTAGTTTTCTGCATGTTTCGAGTTTCAATGGGCTTCTCATTTCACAATTCAGTTTGAAATCAGTAATTGGACGCCTTCTTTTATTCTGTAGATTCACTGACTGTTGCTGTGAAACCAAAACCCCCAGCAGAACATCTTCGTGACGAATCTGATGATGATGAGGAGGATCTGGTATTGGCCATTAAGTATTTCAATTGTTGATCTTAGATAATCAGCTTACCTTGAGCTCTTCTTAGTTATCTGTTTCATGTGACTGCTTACATTTTCAGAAGTTTCGGCTTCCAGAGTCTTCAAGTCGGTTGAAGAAGAAAGTTTACAATTTTCTGCGTGAGAAGTTGAAGTTTCCTGGTAATTATCATACTACATTATGCAAGAAGTTCAATGTATGAATTGTCTAATTGCATTTTGGTTTTTTGGTCTGTGAATAGATATCCTTTTGATGGTGATTTTCTCTCTCAGTCTAAAGGCTTGGGTCGCTATACTTATCTGGTTTATCATGGCACCTGTTGCCCATAGCTGGGATCTTGGACCTTTATATGTGAGTAATAATATTCTGTTGTTTACTAGGTTTTGAATGTGGGTGCCATTATTTTCATTAGATATTTTGATGGCAACATTAGAGTTGTTTCATAAACTGTTCTGCAATTCAGTTTTTCATAAATGTCTAATTAGAGTTTTATAGCATAATTAACATGTTCCTTCTAGAATATGGTTTCTGTGCAGTTGACATGATTATCCAATTGTGTTGTCAGAATAACCAATTTCAATTTTTCATAAAAAAAACAACACATTTTTCAGAGAATAAAGCAAGAGAACAACTTTTAGAAAATAATTACTCAATTGTTTTTTTTTTCCCAACAAGAGCAATAGCTCAACTAAATGTGTGTCCATAATCAAGAGGTCATGGGTTCAAACCTCCCATCCTCAATTGTTTTTAACTAAAAATAATATATTCATATTTTTATAGTTGGTAAATATTGATACTACTACAACTTTTAGTAGGGTCTTCTTTCAGCAAGTGACAAATTTTCTGTTCTCCATATACTTTTTTAAGCTGATTTGCCTTGATCTAGTATATTGTGAGAAAGTATATTATATCCCGGGCGACCCCTAAGAGAGAGGCTTTCTCATGTAGCTACTTTATTGCTAAAAAGTATAGTTGGCATTAGCATTTTCTTTCGGAGGAAATAAGGTATTGGGAAACAGAGATTGGTAACAGAGAATAGTTTCTTCTCGTTGACTCATAGCTTCAAGACTCCCTCTCTTAAACGGCAATTGGTAAAGGTGATGTGCAGACTTGATGATATAATATACAAATAAAAACGAGGCGGGTGCATAGCATGGAAAACAAGTCTATTTTTCTTTTCAAACTATCATGCCACACCATAAAAATATGTGCTTATTTTCATGAATAAATATTTTAGGATCGTCTATTTGATAGGGTTTTACATGTTTGAGTCTTTTTTGCAGATACTTGGAACTGGTTTTTGCATCATTCTACTAAATCTTGGACATAGAAAATCTGGAGAAATGAGGTAAGTAGTATTTGCGAGAAACTCTCAGGAGTTTTTTATGCTTTTGATATACTAATACTCGTCGTGATTGTGTGTTCATATATTTCCTATCTCATGGCATGCCCAGCTATTGGCAAGGTGTTTGGTCCTTTATCCAGTGCGAGAAGGAAAAAGGATAGGGGTTGAAGGATAATTATAAGCATTGGCGACATTGTAAATTGATTAGTAGAGGCAGGAATTAGAAAGAAAAAGAACCAGGAAGCTAGTTAAAACTATCAGTATAATGAAGTACTTATTGTTATATATAGGGCGGGAGAAGGTCAAAGATAAGATGGTATCCTATAGTGTATCATATTCTGGGGTCAAAGATAAGATGGTATCCTATAGTGTATCATATTCTGTAGGAGGGGATCGGAGCTCTCAATTTTTACCTCTTGTTCAGTGAAACTTTCCGTTAGTTTTCAATTACATATCCACTTAGTGGTACTAGAACAATCGAGTTATAGGCCTTGAGGTTAGCAAGTAGGAAGATAGAGAATGAGTTGGAAGCAATAGAGGGGATCTATAATGTTTAAAGACTCAGCAAGTAGAGTGTATTGGGACAGGGGATGCAGCAAATGCACAAGGAGATGATCCATTCCATGGAGCACTATATGGAAAATATAATGAATTACGATTCTGGGGCTAATCTTGTGCCAAGCCAAGCTGAGGAAAATAAGGGTAAGGTTTCAATCATACAAGCAAATAATGGCGTCAATTCAGTGCCAAATTAAGGAAGATGAGGGGAATGCTTTATAGGAAGGATCATCATCTAGACCTGTGGCAATGGTGATGGAGGAAAATGGCATCATAGAGAACTAATGAGGATTCACACTGGAGATTTCAAATGGAATTTTCTGGTGACCACTACCCTGCAGCTTGCTTTTCTTAGCTGAGGAATACTTGAATGCTAATAAATTGAGGAGAGGCTTGTGGTAGCAACGCTTGAACCCTAATAAATTGGTTTGTTGAGAGTTTGAGGTGGCAACACTGTATATGAAGAGAAGGGTGAGGCATTGACTGGCTTTAGCAGAAGGAAGGATGTATGTCATTTAAAAATTGGATTGAGTAGCGAGGGAAAGGATACTTGCTAGGCCCGCTTTGGCCAATGCAAGATGAATCACACACATAGATTTCAGGCTGTGTACAACACTACAACTCAAGAAACTACCATGAGAGAGTATGCAAGGCATTTCGACATCATTGATTGGTACTATATGATGAGTTTTGGATAGGCATTTGGTCGACGACCTCAAGGTGGATCATTGTATGAAGAAGAAGAATGATATAATGGAAGGCATTTCGGCATCATTGATTGGTATTAAATGATTGCTTTTGGATGGGCATTTGGTCGGTGACCTCCAGTTGGATCTTTTTATGAAGAGGAATGATGCAATAGTCGTTAATGGAAGATTCATTAGATGTAAGTGATGCTTATCTTTGTGCTTGAAGACTTGGGCTTTAAAGGTGTGTTCCCCTCAAGGTTTCAGGTTTGAGAGTCACGTGTGACATTAATTTGTAGATATCTTTGTGAAAAATTGAGTCAAATGAGTAGAGCTAAAATTGAACTAGATCGTCTCTAATCAAATAGGGCCGATTCAAATCAAACTGGTTTGTGCTAGGGGTGCAAGGAAAAATTAAAAAAACTGAAGAAGAAAAAAAATTTCCGAACACCAAAATTGACAACGCTTTTTGGTTGGAACCGATTTAATTGGGCAATTTCAGTTTTAAAATTAGGAAAACCGAATATTAGCATTTCGGTTTTAGTTTTCAATAATTAAAAAAAAAAATCTAAAACCGAGCGATCAATAATAAATATAAATATAAATATAAATATAAATATAAATATAAATATATAAATATATAAATATATAAATATATAAATATATAAATATATAAATATATAAATATATAAATATATAAATATATAAATATATAAATATATAAATATATAAATATATAAATATATAAATATATAAATATATAAATATATAAATATATAAATATATAAATATATAAATATATAAATATATAAATATATAAATATATAAATATATAAATATATAAATATATAAATATATAAATATATAAATATATAAATATATAAATATATAAATATATAAATATATAAATATATAAATATATAAATATATAAATATATAATATATAAATATATATATATAAATATATAAATATATAAATATATATATAAATATATAAATATATAAATATATATATATAAATATATAAATATATAAATATATATATATATATATATATATTTTTTTTTTTCCCTTTCTCAAACCGAGAAATCGAAGTCTCACTCCACTATACTCAGGGTAACCATGTTGTCACTAGGCGAGACCTCGAAGGAATGGAGACATGTGAGGTATTTACAAATTAATGTCAAAGGGTAAGTTTTGAACTTGAGAGGAGCATACTTTCAAAATGAAGCCTTCGATCACTGGTCCACCTTGTGGGGCCGATAATAAATATATTTAAAATAGTTTCATATAAATAATAACAAACCATGGGTCAATTGCATGCTTCTTCCTATTTTGTTCCCAATCTTCGTTAGAGTCCTAGTATGCACTCTTTTATTTTGTATTTTTAAGCGGCCTTTGTCTACACACACACATACAGATAGAAAGCAATTAAAGGTGGTAGTGTCGAGGCATGATTCTCAACAAGCATCCTTGGGGATTCGGGTTCGAATGTCAACTTTTGCATTAATATTTTGTATTTAACCCTCCGATTCTCTCTAAATCGATGAATCTCCTAACCACCGGTTTATCGGTTCAAAGTGGTTTGATTAAGTTTATATATATGGCGATTCGATTCGTTTAGTTTTTCTTAGGAATATTCTGAGATGGTCGATTCTGATTTGACTCTCTAACCAAGTCAAACTGAATCGCTTACACCCTAGTTTGTACAACGAGGGAAATCTCAAAACTTAAAGATTCCCTAATTGCATGCCGAAAGATTCAGGGGAGGAGTTTACCCTTGGACGAAAGCTACTCACAAATGACGTGGGAGCTTCATGGTTGTTGGATTTTGATGGGAACTGTCCACAATGGAAGGAAAAATGGTGATATGTCGAACACCAACCCAAAAATGAGAAAATGAGGAGCAAGGCTCTCTGGGTCTGGGAAGGGAAAAAGAGAAACCCAAGTGAAAAAGGTCCCATAGAGCTCAAAGCCTCAAATCGAGTGAGGCACTAGCTTGAAAGCCTTGCTGTCTCGCAAAACAATGGTGGATAGGAGCAACTAACTACTCATAGAAGTTGAAATTGGTTGAAGAATGAAGGGGAGAAGATGAGGGATCTAAACATACATGACTACGGGAGAAGAAGCCACATAGAGCACGTGCTTGCCGGAGTTGCAGAGACCACACCAGAGAAGAGAAAGGTTTGCAGTCAAAGTAATGAAAAACAAATTCAGGCCCAATTTAAAAATTAACCCAAAATGACATCATTTGCTGCATAAGTGAAACAATGCCATTTTGACTTAATTTATTTAGCATTTTTTTAGGGCTTTACGTGGTTCTAATGAATTGGCCCTTATGGAAGTGAAGTACTCTTTTCTTTGGGCCACACAGTTGTTATTTTGGGGATCTGGTGGCTGTCTTTTTTAGGTTTGATTTGTATGGATTGGAAGTGTCTCTCACCATGACCATTTTAAGTAGGTGAACTGAACAAAAGTTGTTGAAGTATCTCTCACCATTGTGTGGTGGATGTGCTGCTCATACACAAAATTATCCTCCTCTTTTGTTAGGTTTTGTACATACGAGCAGATGCTGGATTTTTTGGCTTTACTTTTTTTATTTGGGGGATTTTTCAATGTGATCCTGGGAATAGAGATGCTTGTTGTTGGGCGGATTCAAATTTTGCTTTGTTATGAAAGGTCAAAATTTCAAAGAAGGTTAAGTTTTTTACTTAGCATGTTCTCCACGGAAGGATTAGCACTTTAGAAAGGGGTGTGTATGTTGCATCATGTGTAGGAGAGCAGTGGAGGATCTTGACCATCTTCTTTGTCGTTATGAGATGGCCTCAAAGGTGGGGCATGATTGAATCAGTTTCTTTTGAAGAGTTTGGCTTTGTGTTGGCTAGATAGAGAGATTGTACAGAGATAATCAAAGATTCACTTATTGCCCCCTTCATTTTGTGTCAAATGGGAGTTTTTTTGGCAAGTTGGTCTTTGTGTCATATTGTGGGTTTTTAGGGAGGGAGAAACAATAGAATTTTTAGTGAGGTAGAAAGATCGTTCGGTGATGTTTGGACCCTCATTAATTTCTTTGTTTCTCTTTTCGACCTCTGTTTTTAAGCCTTTTCTGCAATTAGGCGTTATTTACTTGATAAGTGTTCGTTTTTGTAGGTTGTTTCCCGTTTGTGGTTTTTTTTCTGTTTGTCCTCTTATTATTATGTTATTTCATTTGTTTTTTCTGAATGGTGAATAAAAGTTTCTACTAAGGGTGACTCAAGTTTATCTCACTCCCTAATATCACTAAAACTGAAATATATGATCAAATTATTTGCATCCAAGGCCTAGCTTTTTGGTTGAACTAAATACAACATAAGTGTTCGACGAGATTTCTTGAGAAATTTAATTTGCGTGATTAAACTTGAGACAAGTCGCACAAAATATAATAATTGAAATCCTCATGAGGCCTCAATCTTCAGTTTTAGAGGATACTGAAGTATGTATTAACTTCAATTTTTAAGAAGATATAAGTTTTAGTCTTTAGTTTTGAAGGAAGATATAACTTCCACTCTTCCGTCTTCCCATTCAAGAAGATACAACTTTCCAGAGTCAACTTTCGGTCTTCATTCTTCAAGGTGCTCTTTGGGCTTCAATCTTGAGACCCTCTAAAATGAAGGAGGAACCCTCTATTTATAAAGATTAGAGTTTTCCAAAGCTTTAAATGGGCTTAGGCTTTGTTGATTTTCTGCCATTCTTTGTGTGGGAAAAACACAGGTGTTGGGTCAATTTACTTATAAACTTGACATATTTGAGCCCAACCCATTTTTAAAGTCAATGGAACTGGCCTCTTTCTAGAGAAAGGTCGTTGCAAGTGTAGACGTGGTATCTTTTGGATTTTTTTTTTTTTTTTTGAAAAGTAGTATCTTTTGGAAATTGAGATTCTTTTAGAGCTAAAAATCTTAGCTTAATGAATATATGGAAATGAGGGTCGCAAGTATCACATTTGTCCTTTTCAAAAAAAAGTATCACATTTATCTCATTTGTATCTTGGCAATGGTCGTTGCATTCGTTTTGGGAAGATGTGTGGTTGGGGGATCCATCCCTTCATTCCGTTATTTTAGCTCTTTAAGTGGGTTTTTGGGAAAGATGACGAGAATATAGTTATGGGGAGAATGATCCTTATGATCTTTGTAACCTATTTTTGGGCCACCGAGAATCATTCCCCCTACAATCCTTTTTCCCTATAACCAGCCTTTGTTTTTTTTTTATTTTGATAGGAAACAAAGCATTTACATTGATAGTTGAAAATATACATCCTATCGAGACGATTATCATATAAGGCTTTGCCACTGAGTGATTAATGTGGTTAAGTCATAGCTACACAAAGGAGGGATAGAATGACACCAATACAAGGCCAGATACATAATAGATTCAAGAAGAGAATTGTAATCCTTGTAGGAGTAGCCATCATTAAAAAGCTTGTTGTTCCTCTCCCTCCATATACGCCACAGAAAAGCATCGATCATGCTAAGTCAAAGGTTCTCAATGTCGCCGGCGAAGGGGTGCCCCATTAATAGGGGTATATGACAACATCTGATATTCTATTAGGCAGAGGAGTGGACCAGTTAAATGCTGATAGAATATGAGCCCAAATTTTGGATGTTTTTCCACAATTGATGAACAGATGATGCTACGTTTCATAATCCGATTGGCACATACCACAGATAGAAGGCTGTAAAGCCGTTTTCACCATCTTTTTTTGGATAATCTCATTCGTATTGATGCCACACTTCCTAAGCTCCCAAATAAAAACTTTAACTTTCTTCGGTTGAGGACCCTTCCAAAGCCTACTGTATAACTCGCGGCTATGGTTGTTATCTTGAGAAGATGATAAAAGCTTGTACAAGGAACAAGTTGTAAAGCCACCGGTATCATTGAAAGGCCAAACCCATGAGTCATCAACGTTACTGATCTCAATTTGGTCCAATATCGAGCAGAGATTTCCCCATTCAATAGCCTCAACATCATTCAAATTCCTCCTCAAATTAAGACACCAATTCGTAGTGCCATGGTCAGCAATTGATGAGATTACCCCCTTTTTGTCAAGGGTCACATTATAGATGAGGAGAAATCTATATCTAAGGGTCATATCGTCTTTCCACTTATCCTCCCAAAATAAGATTTGGTTCCCTCTTCCAACTTTGTGAACAAGGATGCTTGTGTGGCAGATTTTTTGGACTTTGAAACTGGATTTGGAATATAAATCTCAGAAGGAACCTTAAAGATGTGGAGATTGATGAATGGGCCACTCTTTTCAATACTCCGGACAGTATCAATGTATCGGATAGGGAGGATTCGTGGAGGTGGAAACTTGAAACTAGTTATATCTTTTCATCAAAATTGTTGTTAGAAAGCTTTGCTCCAAGAGAATCTAACCTTAAAAAAAGACTTTTATGCCTTTTTATGGAAATGGCCACAACCGAAAAAAGTAAAGTTTTTCTCATGGGAGCTCAGTCATGTCATCCTTAACACAAATGACAAGCTTCAAAAAAGAGCACCGGGTTTGGTCATATCGCCACAATGTTGTATGATGTGTATGAATGGTCTTGAAAGTTAATATCACCTTTTCTACTCTTTCTCTATGGCTATGGACATTTGGAATCAGCTCCTTCATTGTTTTGATTGGAATTTGGTGATGCCCGGAAATATTAGAGATGTGGTCCTATATACAACATTGGCCATCCCTTTAAAGACAAAAAGAAATCGCTATAGGAGCTTTTTCTAGTTGCATTTTGGTGGTCATTATGGAAAGCTAGAAGTGCTAAATTATTTTCTCATGGGAATGAACACAGAAGACATTTATTTGAAGACATCATTGTACTTGCTAACACATGGGCACACAATATTCACCCATTTAAGGATTATAGTCTTACAACTCTTTTGTTTTGTTGGAAAAGTTTTATGTAAAATGCTTTTGATTATATTGTAACTTTTCATTTATCGATGAAAGATTTTGTTTCCTATAAAAAAAAAAAACTTTGTGAACAACATTATTATAGATCTAGCTATCATGTTTGGATATGGTTTCCATGGCCCTTTGGCTGTATTGAGCGAGAACCCCCCATGTCTCTTGGATTTAAGAGAACCTCTATATTTGAGCCGAAGCACCATCCTCCACAAAGCATCCATTTCTATACCATATCGCTAGTGCCACTTTGCCGACAAAGATCAGCTTTTAAGTTTAATATCAGGGATTCCCAATCCTCCTTCTCCAATTGGAGTCTTGACCACATTCCAACGAACCAGATGGCTAATGGATTTTCCTCTATTGCCTCTCCAAAGATAATCCCGAAATAGCTTCTCAATATTGTATTTAACTTTTGATGGAGCTTCCTATAATTATTAATGATAAAGAGTAGATAGGAATGTTGGCCAATATGGCGTTGATTAATGTGAGCCTCCCACCTTTAGATAAGTTGTTGCTACTACATGAATTCAATCGCTTCTCAATCTTTTCCACAATAGGGTTCCAAAATTCCATGGTCTTGGGCTTTCCAAGGAGGGGCAGGTCGAGATATGAAGCCGGCCAGGAACCAACAAAAAAGCCATGAGGCTGATTAAGGCTAGCAGATTCAACTTCATTCAGACCAATTGAGAAAAATTCAATCTTATTAACATTGATGTTAAGTCCAGATGCATACTCGAATGCCTTAGTGTCAATGAGATTCCCAAACTTTGTTGGCTCGGCCTCGGAAAATAAGATGGTGTCATCGGCGAATTGAAGATGTGTAATGGATAACTTATCTTGATGATCTTCCACAAAAAAACCTTCGATATTACCCTCATTCTCCTCTTGGATAAGCATTTTGCTCAAACTATCAACAACTATTGTGAAAAGAAAAGGAGATGGGGTTTCCACATAACTATTCTTCTCATAACTAGTCTTTGTTTCCACATAACTATTCTTTATTCTTCTCATAGCTAATTTTCATTCTCCCTATAACTACTTTTTATTCTTTCTATACTTGCTATTTTATTATCTTCTTAATTATTTTCTTCACTCTCATAATTATTTTCTTCACTCTAAACACAAGTACTGCTTCTCATATTCATACTTCTCCTCTTAACCATTCTCTTCCCCAAACAAAATAATCATTCTCTCCATATTCTCTTCCTAATTTTCATCCTCCCAAAATCATTCTCACTCTTCTTGCCCCAATCACCTTCTATAAGATTTTTACTCAAACTTTGTGTTGGGTGACGGATTTATGGGTTTCAATCAGCTTTTTCATGGCGTTTAATCTTTTGAAGGCAGTTGAAAGAGATCGAAATTAAAATTTTTCAAAATTTAATGGCAATGCTTTCTTCGGTGTAGCCCTCAACCTCTCTGGATTGAAGATTTTAGTCTCTCGACCCCATAGGTTTCTTTTAAGACAAATCTCTCCTTTTTCGTTGGTGGTGATTTATCACCGGGAAAAATGTAAATAAATGTGGCTTTATGGAACTCTTCAGACTCAACGAGAGTTAATATATTATTATGTATCCTCTTGCATGGTCACTTACATTCTTCAGAGTTTTTGCAAAAGAAGATGCCATCATTTTGTACATTTTCTTCGAAATGTGGAGGCGCTAGTTATCACATATTTTCTTTGAGTTTGAATTTGTTTCGAAGTGTTGGTTTGAGCTATTCAGTATTTTGAGCATCGGTCTCTTTTGGTTTCGTCAAATAAATTGGCTTTAGTCCAATTATCATTTGATCAGGCCACTTTTTGATCTGGTTAAGTCTATTGGTACGATCACACGGCCATAAGAAAAACATGTGGCATATTTCCGTTTGTATTTAATTTGGGGATCAACATTACTTTATATTGGTCCTTAAAGTAATAAATAGTTTTATCATTAATTTTAAAAGTGAAGTGTCAATTTTTTATCGGCTGAAATTTCTCTTCTAACTGGAAGAAAGCTGAAGTGTGAAATCATGTTATTGAAATATCCCTATTTTCAAAAGGATGAAATAGATAAGCGAGGTGTTAAAGGCTATGATGATTTACATTTAGTGAAGCATTGCTTTCCTATGAAGCCTTATGACGTTGGGCCTGCACCTTACGGTGTCTTGCTTAATTATTGAAAATATAAATTTTACCAACCCTAAACGCCAACATCCATGTGTTTTGGGTTTTTCTTTATCCTTTATTATATACAAAATTAACATTTGCTAACCCTTATGTTTTTTTTAGTACTTCCACTCCAAGAATGATATATCTTCTCTATGGCTGCTTCTCACAACAAATAAAAACCACACTTAGTTTGCGCCTTAGAACTTTTAAAAACATTGGTCAATTGTGAGTTTGGTTTTGAGCTTTGTATTTTTGGTAAGAAGAATGATGGTATTAGACTATTGGGCTTCAGATATGCATTAATCGTAATCTTCATTGCTATGTTATGATAAACACAAAATGCATGGTCGCCAAAGTATCCGTGTCGGACATGTATCCGACACTGATACTTGTAAACACTCTAGACATGTGTCTGACACTTCAAATTTTGTGTCCTCCGTTATTATTATAATTATTAACTTCAGACACTTCATGGACATGCCATGGACACTCCCTGAGCACCTCATTTAAGACTTATTTGTTTCAAATGACCGATGACACGATAACACGACAATAGGTAGTGTTGGTGGTCATTGAAGATAGATGGACTAAAATGGATAAAAGGAAAGAAAATGAGAAAATATAATGGAGAAAAGGAAAATGAGGTAAAAACTAAAATATTTTAAGATTGTTAAAGGGTAGGGACTTAGGGTTATAACTGACTAAAAATATTTTGTGTATAATCTACTAATAGTTTATCATAAAAATAATAATAAATAATGTCCTCAACGTATCCGTGTCCTGCATTGTTAAATAAAAACGTGTCTACGTATTGATGTAGTGTCGTGTCCATATCTCGTGTTTATGTTTTTTAGATGGTCGCTTGTGCAAAGCTCTCTTACACTACTTTCTGTCGTATGCATCATCAATAGCTTATAGCCAGAGCTTCTATGCTACGGTAAAGGATATTTGCTTAGAGCACAACTAGACTAAAATGATTAGGCAAACGGTGGTACATGGAAAGACATCAATTTTTTACAAGGAAAATTTTATTAGCAGCTCGTGAGTTTCTGAAGTTGGGTTCCTGAATGTTTAGACCTTTTCGACATTTTCATGTTGCAGCAAGAACTGAGGGATTGGCTTATAAACTTGCGAACGTGCAGTAAGCCTTGAGGGTCAAAATGAGTTTTCAGTTTCTGATGGGTGTGCGGATCACACAAGTACTGATTCAATGGAAGAAATGTGTCTTTATGATGTCGCATGGGATCCAGCTATAACTTAGTCTTGACTCGCGGGCAAGGTTACTACTGTTAGGCTAGGGGTATTGGTAAATTATAGGCTCCTGATCCAAACCAATATGCGATGCAAGGAGATGGAAGACTGATGATGATCGGCATATCTGCGTAAAGGGTGAAAATGAGGTCAAACTGTGATGTAGGGCGGGAGTGGGTAGAAATTCAGGAGGTTGGTTATACTTATGGCCATCGACATGCAAGTTCGTGTAGCAAAATAATAACCGAAGAGGGTAACCAATGGGGTTCTAGGTTCTAGTGCGATTGAAAGCTTTAGTTCTCCCTATTGTCATGGTAACGTCCAACTAGCTTTCATTGACTTTTCTACTTTGACTCTAATAGCAAATGTTGTTTGGATTGCTAACAAGAGAATAGCTTTACTAACATGAAGTATGTGCTTACGACCAAGAGACCATGAGTTTGTATCTCTCGAACAAAAAAGTAATGTTTTCTAGACGTGTCTCTTTCATGCTCTTTATGGACTCGTTAATCATGGCTTCTATGTACTTTTAGCTTGCATCATATATTCTGTTTGGAAATTGTCTAACATCAGGAATGTCTTATCGAGTAACGACTGAGACGCGTCATATTTCCCATTTTTTCAGTGCATACTCCATCTTCAATGAAGGTTTCAGAGAGCTTCCAGGGACCCTGAATGCGGACCGCCTCGATAGAGATGTTCGGTTGGGTCATCTCTGATCATCTTAATACTTTAATGCTCATGTTGTACTTGAACTTGACAAAGGGTAAGAGAATCCTAAGAAAGTTGTATTTATGTTTCCTTCGTTCATATGTATAAAAGTTCCATCTTCAGTAGTTAATGAAACGGCTCTCTCTCTTTGTTTCTCTCTTAAATGATCAATTGGGCATAATGCGAGACTGAAAGAGTTGAGTTATCAAGAAATCGTGGAAGGCAAGTTTGCATTTG

mRNA sequence

AAAAAATATTAGGACATGAGTTTCTATCTCACATTCCCATTGTTAATGAACTAAGTCCATTTTCTGTAATTTGCAGCTGTTGTTTGCCAGTTTAAAACATGCGTAGCTGAATCAAGTTTCGAAGGGTGATGAGAGAAGACGGAATCTCCCTTTCACCGCTCGCAGATCGCCGGAAGCCGTAGCCGAATCATCGTCTTTGCGATGGCGGAGATTGTTGAGGAGCTCAATCGCAATCGGAACTTTACCGGAGGTTCCAATCCCAGCATTAGCAATGGCGGTTCTTCGCAAAACTCAATCGAAATCATCGTTCGAACCATCGGCCCTGCGCGTCCCTCTCGCCTTCTCGTCTCGTCGCCAGTAATGGTGCGCGACTTGCGGAGCTTGGTCGCCGAGAGTTTTCAGTTACCTGTTGGCAATTTGAAGCTCATTTTGCGAGGAAATATTTTGGATGATTGTAAAAATGAGGATGATGTATTTGTGCGGCTCAATCATGGGGATTCACTGACTGTTGCTGTGAAACCAAAACCCCCAGCAGAACATCTTCGTGACGAATCTGATGATGATGAGGAGGATCTGAAGTTTCGGCTTCCAGAGTCTTCAAGTCGGTTGAAGAAGAAAGTTTACAATTTTCTGCGTGAGAAGTTGAAGTTTCCTGATATCCTTTTGATGGTGATTTTCTCTCTCAGTCTAAAGGCTTGGGTCGCTATACTTATCTGGTTTATCATGGCACCTGTTGCCCATAGCTGGGATCTTGGACCTTTATATATACTTGGAACTGGTTTTTGCATCATTCTACTAAATCTTGGACATAGAAAATCTGGAGAAATGAGTGCATACTCCATCTTCAATGAAGGTTTCAGAGAGCTTCCAGGGACCCTGAATGCGGACCGCCTCGATAGAGATGTTCGGTTGGGTCATCTCTGATCATCTTAATACTTTAATGCTCATGTTGTACTTGAACTTGACAAAGGGTAAGAGAATCCTAAGAAAGTTGTATTTATGTTTCCTTCGTTCATATGTATAAAAGTTCCATCTTCAGTAGTTAATGAAACGGCTCTCTCTCTTTGTTTCTCTCTTAAATGATCAATTGGGCATAATGCGAGACTGAAAGAGTTGAGTTATCAAGAAATCGTGGAAGGCAAGTTTGCATTTG

Coding sequence (CDS)

ATGGCGGAGATTGTTGAGGAGCTCAATCGCAATCGGAACTTTACCGGAGGTTCCAATCCCAGCATTAGCAATGGCGGTTCTTCGCAAAACTCAATCGAAATCATCGTTCGAACCATCGGCCCTGCGCGTCCCTCTCGCCTTCTCGTCTCGTCGCCAGTAATGGTGCGCGACTTGCGGAGCTTGGTCGCCGAGAGTTTTCAGTTACCTGTTGGCAATTTGAAGCTCATTTTGCGAGGAAATATTTTGGATGATTGTAAAAATGAGGATGATGTATTTGTGCGGCTCAATCATGGGGATTCACTGACTGTTGCTGTGAAACCAAAACCCCCAGCAGAACATCTTCGTGACGAATCTGATGATGATGAGGAGGATCTGAAGTTTCGGCTTCCAGAGTCTTCAAGTCGGTTGAAGAAGAAAGTTTACAATTTTCTGCGTGAGAAGTTGAAGTTTCCTGATATCCTTTTGATGGTGATTTTCTCTCTCAGTCTAAAGGCTTGGGTCGCTATACTTATCTGGTTTATCATGGCACCTGTTGCCCATAGCTGGGATCTTGGACCTTTATATATACTTGGAACTGGTTTTTGCATCATTCTACTAAATCTTGGACATAGAAAATCTGGAGAAATGAGTGCATACTCCATCTTCAATGAAGGTTTCAGAGAGCTTCCAGGGACCCTGAATGCGGACCGCCTCGATAGAGATGTTCGGTTGGGTCATCTCTGA

Protein sequence

MAEIVEELNRNRNFTGGSNPSISNGGSSQNSIEIIVRTIGPARPSRLLVSSPVMVRDLRSLVAESFQLPVGNLKLILRGNILDDCKNEDDVFVRLNHGDSLTVAVKPKPPAEHLRDESDDDEEDLKFRLPESSSRLKKKVYNFLREKLKFPDILLMVIFSLSLKAWVAILIWFIMAPVAHSWDLGPLYILGTGFCIILLNLGHRKSGEMSAYSIFNEGFRELPGTLNADRLDRDVRLGHL

Homology

[Close]

BLAST of Sed0027053 vs. NCBI nr
Match: XP_022948058.1 (uncharacterized protein LOC111451749 [Cucurbita moschata] >KAG6596919.1 hypothetical protein SDJN03_10099, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 411.0 bits (1055), Expect = 7.1e-111
Identity = 207/238 (86.97%), Postives = 219/238 (92.02%), Query Frame = 0


Query: 1   MAEIVEELNRNRNFTGGSNPSISNGGSSQNSIEIIVRTIGPARPSRLLVSSPVMVRDLRS 60
           MAEIVE  N NRN +GG N SI+ G   +N+IEI +RTIGPARPSRLLV SP+ V DLR 
Sbjct: 1   MAEIVEVPNFNRNISGGPNSSITYGNPPENTIEITIRTIGPARPSRLLVPSPIKVCDLRK 60

Query: 61  LVAESFQLPVGNLKLILRGNILDDCKNEDDVFVRLNHGDSLTVAVKPKPPAEHLRDESDD 120
           LVAE  QLP+GNLKLILRG ILDDCKN+DDVFVRLNHGDSLTVAVKPKPPAEHLRD+SDD
Sbjct: 61  LVAERSQLPIGNLKLILRGKILDDCKNDDDVFVRLNHGDSLTVAVKPKPPAEHLRDDSDD 120

Query: 121 DEEDLKFRLPESSSRLKKKVYNFLREKLKFPDILLMVIFSLSLKAWVAILIWFIMAPVAH 180
           DE+DLKFRLPESSSRLKKK+YNFLREKLKFPDILLMVIFSLSLKAW AILIWFIMAPVAH
Sbjct: 121 DEDDLKFRLPESSSRLKKKIYNFLREKLKFPDILLMVIFSLSLKAWAAILIWFIMAPVAH 180

Query: 181 SWDLGPLYILGTGFCIILLNLGHRKSGEMSAYSIFNEGFRELPGTLNADRLDRDVRLG 239
           SWDLGPLYILGTGFCIILLNLGHR+SGEMSAYSIFNEGFRELPGTLNADRLDRDVRLG
Sbjct: 181 SWDLGPLYILGTGFCIILLNLGHRRSGEMSAYSIFNEGFRELPGTLNADRLDRDVRLG 238

[Close]

BLAST of Sed0027053 vs. NCBI nr
Match: XP_038905341.1 (uncharacterized protein LOC120091406 isoform X1 [Benincasa hispida])

HSP 1 Score: 407.9 bits (1047), Expect = 6.0e-110
Identity = 205/238 (86.13%), Postives = 219/238 (92.02%), Query Frame = 0


Query: 1   MAEIVEELNRNRNFTGGSNPSISNGGSSQNSIEIIVRTIGPARPSRLLVSSPVMVRDLRS 60
           MAEIVEE N NRN  GG+N SI NG S Q+++EIIVRTIGPARPSRLL  SP+ VRDLR 
Sbjct: 70  MAEIVEESNFNRNIGGGANSSIGNGNSPQDTVEIIVRTIGPARPSRLLAPSPIKVRDLRK 129

Query: 61  LVAESFQLPVGNLKLILRGNILDDCKNEDDVFVRLNHGDSLTVAVKPKPPAEHLRDESDD 120
           L+AES +LP+GNLKLILRG ILDDCKNEDDV+VRLNHGDSLTVAVKPK PAEHLRDE D+
Sbjct: 130 LIAESSRLPIGNLKLILRGKILDDCKNEDDVYVRLNHGDSLTVAVKPKAPAEHLRDEFDE 189

Query: 121 DEEDLKFRLPESSSRLKKKVYNFLREKLKFPDILLMVIFSLSLKAWVAILIWFIMAPVAH 180
           DE+DLKFRLPESS+ LKKKVY FLREKLKFPDILLMVIFSLSLKAW AILIWFIMAPVAH
Sbjct: 190 DEDDLKFRLPESSNWLKKKVYTFLREKLKFPDILLMVIFSLSLKAWAAILIWFIMAPVAH 249

Query: 181 SWDLGPLYILGTGFCIILLNLGHRKSGEMSAYSIFNEGFRELPGTLNADRLDRDVRLG 239
           SWDLGP+YILGTGFCIILLNLGHR+SGEMSAYSIFNEGFRELPGTLNADRLDRDVRLG
Sbjct: 250 SWDLGPIYILGTGFCIILLNLGHRQSGEMSAYSIFNEGFRELPGTLNADRLDRDVRLG 307

[Close]

BLAST of Sed0027053 vs. NCBI nr
Match: XP_023520906.1 (uncharacterized protein LOC111784424 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 404.4 bits (1038), Expect = 6.6e-109
Identity = 204/238 (85.71%), Postives = 218/238 (91.60%), Query Frame = 0


Query: 1   MAEIVEELNRNRNFTGGSNPSISNGGSSQNSIEIIVRTIGPARPSRLLVSSPVMVRDLRS 60
           MAEIVE  N NRN +G  N S+S G   +N+IEI +RTIGPARPSRLLV SP+ V DLR 
Sbjct: 1   MAEIVEVPNFNRNISGAPNSSVSYGNPPENTIEITIRTIGPARPSRLLVPSPIKVCDLRK 60

Query: 61  LVAESFQLPVGNLKLILRGNILDDCKNEDDVFVRLNHGDSLTVAVKPKPPAEHLRDESDD 120
           LVAE  QLP+GNLKLILRG ILDD KN+DDVFVRLNHGDSLTVAVKP+PPAEHLRD+SDD
Sbjct: 61  LVAERSQLPIGNLKLILRGKILDDSKNDDDVFVRLNHGDSLTVAVKPRPPAEHLRDDSDD 120

Query: 121 DEEDLKFRLPESSSRLKKKVYNFLREKLKFPDILLMVIFSLSLKAWVAILIWFIMAPVAH 180
           +E+DLKFRLPESSSRLKKK+YNFLREKLKFPDILLMVIFSLSLKAWVAILIWFIMAPVAH
Sbjct: 121 EEDDLKFRLPESSSRLKKKIYNFLREKLKFPDILLMVIFSLSLKAWVAILIWFIMAPVAH 180

Query: 181 SWDLGPLYILGTGFCIILLNLGHRKSGEMSAYSIFNEGFRELPGTLNADRLDRDVRLG 239
           SWDLGPLYILGTGFCIILLNLGHR+SGEMSAYSIFNEGFRELPGTLNADRLDRDVRLG
Sbjct: 181 SWDLGPLYILGTGFCIILLNLGHRRSGEMSAYSIFNEGFRELPGTLNADRLDRDVRLG 238

[Close]

BLAST of Sed0027053 vs. NCBI nr
Match: XP_022145366.1 (uncharacterized protein LOC111014834 [Momordica charantia])

HSP 1 Score: 404.1 bits (1037), Expect = 8.7e-109
Identity = 206/238 (86.55%), Postives = 216/238 (90.76%), Query Frame = 0


Query: 1   MAEIVEELNRNRNFTGGSNPSISNGGSSQNSIEIIVRTIGPARPSRLLVSSPVMVRDLRS 60
           MAEIVEE N NRN  GG N S SN    +N+++IIVRTIGPARPSRL V SPV VRDLR 
Sbjct: 1   MAEIVEEHNFNRNIIGGGNSSSSNANPPENTVQIIVRTIGPARPSRLFVPSPVKVRDLRK 60

Query: 61  LVAESFQLPVGNLKLILRGNILDDCKNEDDVFVRLNHGDSLTVAVKPKPPAEHLRDESDD 120
           LVAES QLP+GNLKLILRG ILDD KN+DDV+VRLN G+SLTVAVKPKPPAEHLRD  DD
Sbjct: 61  LVAESNQLPIGNLKLILRGKILDDYKNDDDVYVRLNDGESLTVAVKPKPPAEHLRDGFDD 120

Query: 121 DEEDLKFRLPESSSRLKKKVYNFLREKLKFPDILLMVIFSLSLKAWVAILIWFIMAPVAH 180
           DE+DLKFRLPESSSRLKKK+YNFLREKLKFPDILLMVIFSLSLKAW AILIWFIMAPVAH
Sbjct: 121 DEDDLKFRLPESSSRLKKKIYNFLREKLKFPDILLMVIFSLSLKAWAAILIWFIMAPVAH 180

Query: 181 SWDLGPLYILGTGFCIILLNLGHRKSGEMSAYSIFNEGFRELPGTLNADRLDRDVRLG 239
           SWDLGPLYILGTGFCIILLNLGHRKSGEMSAYSIFNEGFRELPGTLNADRLDRDVRLG
Sbjct: 181 SWDLGPLYILGTGFCIILLNLGHRKSGEMSAYSIFNEGFRELPGTLNADRLDRDVRLG 238

[Close]

BLAST of Sed0027053 vs. NCBI nr
Match: XP_023005519.1 (uncharacterized protein LOC111498482 [Cucurbita maxima])

HSP 1 Score: 400.2 bits (1027), Expect = 1.3e-107
Identity = 204/238 (85.71%), Postives = 216/238 (90.76%), Query Frame = 0


Query: 1   MAEIVEELNRNRNFTGGSNPSISNGGSSQNSIEIIVRTIGPARPSRLLVSSPVMVRDLRS 60
           MAEIVE  N NRN  G  N SI+ G   +N+IEI +RTIGPARPSRLLV S + V DLR 
Sbjct: 1   MAEIVEVPNFNRNIGGAPNSSITYGNPPENTIEITIRTIGPARPSRLLVPSRIKVCDLRK 60

Query: 61  LVAESFQLPVGNLKLILRGNILDDCKNEDDVFVRLNHGDSLTVAVKPKPPAEHLRDESDD 120
           LVAE  QLP+GNLKLILRG ILDD KN+DDVFVRLNHGDSLTVAVKPKPPAEHLRD+SDD
Sbjct: 61  LVAERSQLPIGNLKLILRGKILDDSKNDDDVFVRLNHGDSLTVAVKPKPPAEHLRDDSDD 120

Query: 121 DEEDLKFRLPESSSRLKKKVYNFLREKLKFPDILLMVIFSLSLKAWVAILIWFIMAPVAH 180
           +E+DLKFRLPESSSRLKKK+YNFLREKLKFPDILLMVIFSLSLKAWVAILIWFIMAPVAH
Sbjct: 121 EEDDLKFRLPESSSRLKKKIYNFLREKLKFPDILLMVIFSLSLKAWVAILIWFIMAPVAH 180

Query: 181 SWDLGPLYILGTGFCIILLNLGHRKSGEMSAYSIFNEGFRELPGTLNADRLDRDVRLG 239
           SWDLGPLYILGTGFCIILLNLGHR+SGEMSAYSIFNEGFRELPGTLNADRLDRDVRLG
Sbjct: 181 SWDLGPLYILGTGFCIILLNLGHRRSGEMSAYSIFNEGFRELPGTLNADRLDRDVRLG 238

[Close]

BLAST of Sed0027053 vs. ExPASy TrEMBL
Match: A0A6J1G8B5 (uncharacterized protein LOC111451749 OS=Cucurbita moschata OX=3662 GN=LOC111451749 PE=4 SV=1)

HSP 1 Score: 411.0 bits (1055), Expect = 3.4e-111
Identity = 207/238 (86.97%), Postives = 219/238 (92.02%), Query Frame = 0


Query: 1   MAEIVEELNRNRNFTGGSNPSISNGGSSQNSIEIIVRTIGPARPSRLLVSSPVMVRDLRS 60
           MAEIVE  N NRN +GG N SI+ G   +N+IEI +RTIGPARPSRLLV SP+ V DLR 
Sbjct: 1   MAEIVEVPNFNRNISGGPNSSITYGNPPENTIEITIRTIGPARPSRLLVPSPIKVCDLRK 60

Query: 61  LVAESFQLPVGNLKLILRGNILDDCKNEDDVFVRLNHGDSLTVAVKPKPPAEHLRDESDD 120
           LVAE  QLP+GNLKLILRG ILDDCKN+DDVFVRLNHGDSLTVAVKPKPPAEHLRD+SDD
Sbjct: 61  LVAERSQLPIGNLKLILRGKILDDCKNDDDVFVRLNHGDSLTVAVKPKPPAEHLRDDSDD 120

Query: 121 DEEDLKFRLPESSSRLKKKVYNFLREKLKFPDILLMVIFSLSLKAWVAILIWFIMAPVAH 180
           DE+DLKFRLPESSSRLKKK+YNFLREKLKFPDILLMVIFSLSLKAW AILIWFIMAPVAH
Sbjct: 121 DEDDLKFRLPESSSRLKKKIYNFLREKLKFPDILLMVIFSLSLKAWAAILIWFIMAPVAH 180

Query: 181 SWDLGPLYILGTGFCIILLNLGHRKSGEMSAYSIFNEGFRELPGTLNADRLDRDVRLG 239
           SWDLGPLYILGTGFCIILLNLGHR+SGEMSAYSIFNEGFRELPGTLNADRLDRDVRLG
Sbjct: 181 SWDLGPLYILGTGFCIILLNLGHRRSGEMSAYSIFNEGFRELPGTLNADRLDRDVRLG 238

[Close]

BLAST of Sed0027053 vs. ExPASy TrEMBL
Match: A0A6J1CW45 (uncharacterized protein LOC111014834 OS=Momordica charantia OX=3673 GN=LOC111014834 PE=4 SV=1)

HSP 1 Score: 404.1 bits (1037), Expect = 4.2e-109
Identity = 206/238 (86.55%), Postives = 216/238 (90.76%), Query Frame = 0


Query: 1   MAEIVEELNRNRNFTGGSNPSISNGGSSQNSIEIIVRTIGPARPSRLLVSSPVMVRDLRS 60
           MAEIVEE N NRN  GG N S SN    +N+++IIVRTIGPARPSRL V SPV VRDLR 
Sbjct: 1   MAEIVEEHNFNRNIIGGGNSSSSNANPPENTVQIIVRTIGPARPSRLFVPSPVKVRDLRK 60

Query: 61  LVAESFQLPVGNLKLILRGNILDDCKNEDDVFVRLNHGDSLTVAVKPKPPAEHLRDESDD 120
           LVAES QLP+GNLKLILRG ILDD KN+DDV+VRLN G+SLTVAVKPKPPAEHLRD  DD
Sbjct: 61  LVAESNQLPIGNLKLILRGKILDDYKNDDDVYVRLNDGESLTVAVKPKPPAEHLRDGFDD 120

Query: 121 DEEDLKFRLPESSSRLKKKVYNFLREKLKFPDILLMVIFSLSLKAWVAILIWFIMAPVAH 180
           DE+DLKFRLPESSSRLKKK+YNFLREKLKFPDILLMVIFSLSLKAW AILIWFIMAPVAH
Sbjct: 121 DEDDLKFRLPESSSRLKKKIYNFLREKLKFPDILLMVIFSLSLKAWAAILIWFIMAPVAH 180

Query: 181 SWDLGPLYILGTGFCIILLNLGHRKSGEMSAYSIFNEGFRELPGTLNADRLDRDVRLG 239
           SWDLGPLYILGTGFCIILLNLGHRKSGEMSAYSIFNEGFRELPGTLNADRLDRDVRLG
Sbjct: 181 SWDLGPLYILGTGFCIILLNLGHRKSGEMSAYSIFNEGFRELPGTLNADRLDRDVRLG 238

[Close]

BLAST of Sed0027053 vs. ExPASy TrEMBL
Match: A0A6J1KZE8 (uncharacterized protein LOC111498482 OS=Cucurbita maxima OX=3661 GN=LOC111498482 PE=4 SV=1)

HSP 1 Score: 400.2 bits (1027), Expect = 6.1e-108
Identity = 204/238 (85.71%), Postives = 216/238 (90.76%), Query Frame = 0


Query: 1   MAEIVEELNRNRNFTGGSNPSISNGGSSQNSIEIIVRTIGPARPSRLLVSSPVMVRDLRS 60
           MAEIVE  N NRN  G  N SI+ G   +N+IEI +RTIGPARPSRLLV S + V DLR 
Sbjct: 1   MAEIVEVPNFNRNIGGAPNSSITYGNPPENTIEITIRTIGPARPSRLLVPSRIKVCDLRK 60

Query: 61  LVAESFQLPVGNLKLILRGNILDDCKNEDDVFVRLNHGDSLTVAVKPKPPAEHLRDESDD 120
           LVAE  QLP+GNLKLILRG ILDD KN+DDVFVRLNHGDSLTVAVKPKPPAEHLRD+SDD
Sbjct: 61  LVAERSQLPIGNLKLILRGKILDDSKNDDDVFVRLNHGDSLTVAVKPKPPAEHLRDDSDD 120

Query: 121 DEEDLKFRLPESSSRLKKKVYNFLREKLKFPDILLMVIFSLSLKAWVAILIWFIMAPVAH 180
           +E+DLKFRLPESSSRLKKK+YNFLREKLKFPDILLMVIFSLSLKAWVAILIWFIMAPVAH
Sbjct: 121 EEDDLKFRLPESSSRLKKKIYNFLREKLKFPDILLMVIFSLSLKAWVAILIWFIMAPVAH 180

Query: 181 SWDLGPLYILGTGFCIILLNLGHRKSGEMSAYSIFNEGFRELPGTLNADRLDRDVRLG 239
           SWDLGPLYILGTGFCIILLNLGHR+SGEMSAYSIFNEGFRELPGTLNADRLDRDVRLG
Sbjct: 181 SWDLGPLYILGTGFCIILLNLGHRRSGEMSAYSIFNEGFRELPGTLNADRLDRDVRLG 238

[Close]

BLAST of Sed0027053 vs. ExPASy TrEMBL
Match: A0A0A0L1Y1 (Ubiquitin-like domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G011840 PE=4 SV=1)

HSP 1 Score: 399.8 bits (1026), Expect = 7.9e-108
Identity = 201/238 (84.45%), Postives = 217/238 (91.18%), Query Frame = 0


Query: 1   MAEIVEELNRNRNFTGGSNPSISNGGSSQNSIEIIVRTIGPARPSRLLVSSPVMVRDLRS 60
           MAEIVE+ N NR+ TGG++ SISN    Q+++E+IVRTIGP RPSRLL  S + V DLR 
Sbjct: 1   MAEIVEDSNFNRSITGGADSSISNRTPPQDTVEVIVRTIGPTRPSRLLTPSTIKVCDLRK 60

Query: 61  LVAESFQLPVGNLKLILRGNILDDCKNEDDVFVRLNHGDSLTVAVKPKPPAEHLRDESDD 120
           LVAES +LP+GNLKLILRG ILDDCKNEDDV+VRLNHGDSLTVAVKPKPPAEHLRDE D+
Sbjct: 61  LVAESNRLPIGNLKLILRGKILDDCKNEDDVYVRLNHGDSLTVAVKPKPPAEHLRDEFDE 120

Query: 121 DEEDLKFRLPESSSRLKKKVYNFLREKLKFPDILLMVIFSLSLKAWVAILIWFIMAPVAH 180
           DE+DLKFRLPESSSRLKKKVY FLREKLKFPDILLMV+FSLSLK W AILIWFIMAPVAH
Sbjct: 121 DEDDLKFRLPESSSRLKKKVYTFLREKLKFPDILLMVVFSLSLKGWAAILIWFIMAPVAH 180

Query: 181 SWDLGPLYILGTGFCIILLNLGHRKSGEMSAYSIFNEGFRELPGTLNADRLDRDVRLG 239
           SWDLGPLYILGTGFCIILLNLGHR+SGEMSAYSIFNEGFRELPGTLNADRLDRDVRLG
Sbjct: 181 SWDLGPLYILGTGFCIILLNLGHRRSGEMSAYSIFNEGFRELPGTLNADRLDRDVRLG 238

[Close]

BLAST of Sed0027053 vs. ExPASy TrEMBL
Match: A0A1S4DY93 (uncharacterized protein LOC103490803 OS=Cucumis melo OX=3656 GN=LOC103490803 PE=4 SV=1)

HSP 1 Score: 385.2 bits (988), Expect = 2.0e-103
Identity = 196/238 (82.35%), Postives = 211/238 (88.66%), Query Frame = 0


Query: 1   MAEIVEELNRNRNFTGGSNPSISNGGSSQNSIEIIVRTIGPARPSRLLVSSPVMVRDLRS 60
           MAEIVE+ N NRN        ISN    Q+++E+IVRTIGP RPSRLL  S + V DLR 
Sbjct: 1   MAEIVEDSNFNRN--------ISNRNPPQDTVEVIVRTIGPTRPSRLLTPSTIKVCDLRK 60

Query: 61  LVAESFQLPVGNLKLILRGNILDDCKNEDDVFVRLNHGDSLTVAVKPKPPAEHLRDESDD 120
           LVAES +LP+GNLKLILRG ILDDCKNEDDV+VRLNHGDSLTVAVKPKPPAEHLRDE D+
Sbjct: 61  LVAESSRLPIGNLKLILRGKILDDCKNEDDVYVRLNHGDSLTVAVKPKPPAEHLRDEFDE 120

Query: 121 DEEDLKFRLPESSSRLKKKVYNFLREKLKFPDILLMVIFSLSLKAWVAILIWFIMAPVAH 180
           DE+DLKFRLPESSSRLKKKVY FLREKLKFPDILL+V+FSLSLK W AIL+WFIMAPVAH
Sbjct: 121 DEDDLKFRLPESSSRLKKKVYTFLREKLKFPDILLVVVFSLSLKGWAAILLWFIMAPVAH 180

Query: 181 SWDLGPLYILGTGFCIILLNLGHRKSGEMSAYSIFNEGFRELPGTLNADRLDRDVRLG 239
           SWDLGPLYILGTGFCIILLNLGHR+SGEMSAYSIFNEGFRELPGTLNADRLDRDVRLG
Sbjct: 181 SWDLGPLYILGTGFCIILLNLGHRRSGEMSAYSIFNEGFRELPGTLNADRLDRDVRLG 230

[Close]

BLAST of Sed0027053 vs. TAIR 10
Match: AT2G35360.1 (ubiquitin family protein )

HSP 1 Score: 259.6 bits (662), Expect = 2.5e-69
Identity = 128/223 (57.40%), Postives = 169/223 (75.78%), Query Frame = 0


Query: 18  SNPSISNGGSSQNSIEIIVRTIGPARPSRLLVSSPVMVRDLRSLVAESFQLPVGNLKLIL 77
           S   +S+  ++  ++EI  +TIGPARPS++ V+S + +RDLR+ +AE  + PV  L++IL
Sbjct: 4   STEELSSDSTNNGTVEITYKTIGPARPSQIRVASHIKIRDLRNAIAEKGKFPVSTLRMIL 63

Query: 78  RGNILDDCKNEDDVFVRLNHGDSLTVAVKPKPPAEHLRDESDDDEEDLKFRLPESSSRLK 137
           RG  L D ++ DD++V L   DS  VAV P PPA  +    DDD++DLKF+LP S+SR K
Sbjct: 64  RGKALQDEEDGDDLYVTLKDQDSFIVAVIPNPPA-GVESFDDDDDDDLKFKLPPSASRWK 123

Query: 138 KKVYNFLREKLKFPDILLMVIFSLSLKAWVAILIWFIMAPVAHSWDLGPLYILGTGFCII 197
           +K+Y FLR KLK PDI+LM +FSLSLK WV I +WFI+AP+AH WDLGP++ILGTGF II
Sbjct: 124 RKLYYFLRNKLKLPDIILMGLFSLSLKMWVIITLWFILAPIAHRWDLGPIFILGTGFSII 183

Query: 198 LLNLGHRKSGEMSAYSIFNEGFRELPGTLNADRLDRDVRLGHL 241
           LLNLG R+ G++SAYSIFNE FRELPGT NADR+DRD+R G +
Sbjct: 184 LLNLGKRQPGDVSAYSIFNEDFRELPGTYNADRIDRDIRAGQM 225

The following BLAST results are available for this feature:

BLAST of Sed0027053 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022948058.1	7.1e-111	86.97	uncharacterized protein LOC111451749 [Cucurbita moschata] >KAG6596919.1 hypothet...	[more]
XP_038905341.1	6.0e-110	86.13	uncharacterized protein LOC120091406 isoform X1 [Benincasa hispida]	[more]
XP_023520906.1	6.6e-109	85.71	uncharacterized protein LOC111784424 [Cucurbita pepo subsp. pepo]	[more]
XP_022145366.1	8.7e-109	86.55	uncharacterized protein LOC111014834 [Momordica charantia]	[more]
XP_023005519.1	1.3e-107	85.71	uncharacterized protein LOC111498482 [Cucurbita maxima]	[more]

BLAST of Sed0027053 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0027053 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G8B5	3.4e-111	86.97	uncharacterized protein LOC111451749 OS=Cucurbita moschata OX=3662 GN=LOC1114517...	[more]
A0A6J1CW45	4.2e-109	86.55	uncharacterized protein LOC111014834 OS=Momordica charantia OX=3673 GN=LOC111014...	[more]
A0A6J1KZE8	6.1e-108	85.71	uncharacterized protein LOC111498482 OS=Cucurbita maxima OX=3661 GN=LOC111498482...	[more]
A0A0A0L1Y1	7.9e-108	84.45	Ubiquitin-like domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G011...	[more]
A0A1S4DY93	2.0e-103	82.35	uncharacterized protein LOC103490803 OS=Cucumis melo OX=3656 GN=LOC103490803 PE=...	[more]

BLAST of Sed0027053 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G35360.1	2.5e-69	57.40	ubiquitin family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019387	Uncharacterised domain SAYSvFN	PFAM	PF10260	SAYSvFN	coord: 169..234 e-value: 8.8E-25 score: 86.4
None	No IPR available	GENE3D	3.10.20.90		coord: 18..111 e-value: 2.3E-5 score: 26.0
IPR039159	SAYSvFN domain-containing protein 1	PANTHER	PTHR13527	UNCHARACTERIZED	coord: 33..239
IPR000626	Ubiquitin-like domain	PROSITE	PS50053	UBIQUITIN_2	coord: 32..84 score: 10.22276
IPR029071	Ubiquitin-like domain superfamily	SUPERFAMILY	54236	Ubiquitin-like	coord: 26..110

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0027053.1	Sed0027053.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005515	protein binding