Sed0026942 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTAGGATATTTACTCTCAATTCTAAAAGTAAAAACCAGCACAAAAGAAAGAACAAAATCTAGAAAAGTAAAAACAAGATATCTTAAAAGACAGAGGCAAGCACCAATATCGTCATCCTCAAAAAAGACGACAAGACACAAGGAGGTACGGATGAAGAATCGAAAGAACAAAGGAGATTTGATTCGAGAGGTGTTAGGAACAATGATGCTAGTGGCTACGGTGATTGCGACATTGACTTTTGAAGCCGGAGTCAACCCTCCGGGCGGAGTTTGGCAACAAGATACTCAATACATCACCAGCAACTATGTCCATGAGTATTCTGAAAGGGGCTAA ATGGTAGGATATTTACTCTCAATTCTAAAAGTAAAAACCAGCACAAAAGAAAGAACAAAATCTAGAAAAGTAAAAACAAGATATCTTAAAAGACAGAGGCAAGCACCAATATCGTCATCCTCAAAAAAGACGACAAGACACAAGGAGGTACGGATGAAGAATCGAAAGAACAAAGGAGATTTGATTCGAGAGGTGTTAGGAACAATGATGCTAGTGGCTACGGTGATTGCGACATTGACTTTTGAAGCCGGAGTCAACCCTCCGGGCGGAGTTTGGCAACAAGATACTCAATACATCACCAGCAACTATGTCCATGAGTATTCTGAAAGGGGCTAA ATGGTAGGATATTTACTCTCAATTCTAAAAGTAAAAACCAGCACAAAAGAAAGAACAAAATCTAGAAAAGTAAAAACAAGATATCTTAAAAGACAGAGGCAAGCACCAATATCGTCATCCTCAAAAAAGACGACAAGACACAAGGAGGTACGGATGAAGAATCGAAAGAACAAAGGAGATTTGATTCGAGAGGTGTTAGGAACAATGATGCTAGTGGCTACGGTGATTGCGACATTGACTTTTGAAGCCGGAGTCAACCCTCCGGGCGGAGTTTGGCAACAAGATACTCAATACATCACCAGCAACTATGTCCATGAGTATTCTGAAAGGGGCTAA MVGYLLSILKVKTSTKERTKSRKVKTRYLKRQRQAPISSSSKKTTRHKEVRMKNRKNKGDLIREVLGTMMLVATVIATLTFEAGVNPPGGVWQQDTQYITSNYVHEYSERG Homology
BLAST of Sed0026942 vs. NCBI nr
Match: XP_023526885.1 (ankyrin repeat-containing protein NPR4-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 96.3 bits (238), Expect = 1.8e-16 Identity = 60/109 (55.05%), Postives = 77/109 (70.64%), Query Frame = 0
BLAST of Sed0026942 vs. NCBI nr
Match: XP_022955457.1 (uncharacterized protein LOC111457477 isoform X2 [Cucurbita moschata]) HSP 1 Score: 93.2 bits (230), Expect = 1.5e-15 Identity = 60/108 (55.56%), Postives = 75/108 (69.44%), Query Frame = 0
BLAST of Sed0026942 vs. NCBI nr
Match: XP_022955459.1 (ankyrin repeat-containing protein At5g02620-like isoform X4 [Cucurbita moschata]) HSP 1 Score: 93.2 bits (230), Expect = 1.5e-15 Identity = 60/108 (55.56%), Postives = 75/108 (69.44%), Query Frame = 0
BLAST of Sed0026942 vs. NCBI nr
Match: KAG6581827.1 (Ankyrin repeat-containing protein BDA1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 92.4 bits (228), Expect = 2.6e-15 Identity = 57/109 (52.29%), Postives = 76/109 (69.72%), Query Frame = 0
BLAST of Sed0026942 vs. NCBI nr
Match: XP_022955455.1 (uncharacterized protein LOC111457477 isoform X1 [Cucurbita moschata]) HSP 1 Score: 90.9 bits (224), Expect = 7.5e-15 Identity = 59/113 (52.21%), Postives = 74/113 (65.49%), Query Frame = 0
BLAST of Sed0026942 vs. ExPASy TrEMBL
Match: A0A6J1GWC0 (ankyrin repeat-containing protein At5g02620-like isoform X4 OS=Cucurbita moschata OX=3662 GN=LOC111457477 PE=4 SV=1) HSP 1 Score: 93.2 bits (230), Expect = 7.3e-16 Identity = 60/108 (55.56%), Postives = 75/108 (69.44%), Query Frame = 0
BLAST of Sed0026942 vs. ExPASy TrEMBL
Match: A0A6J1GTP7 (uncharacterized protein LOC111457477 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111457477 PE=4 SV=1) HSP 1 Score: 93.2 bits (230), Expect = 7.3e-16 Identity = 60/108 (55.56%), Postives = 75/108 (69.44%), Query Frame = 0
BLAST of Sed0026942 vs. ExPASy TrEMBL
Match: A0A6J1GV64 (uncharacterized protein LOC111457477 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111457477 PE=4 SV=1) HSP 1 Score: 90.9 bits (224), Expect = 3.6e-15 Identity = 59/113 (52.21%), Postives = 74/113 (65.49%), Query Frame = 0
BLAST of Sed0026942 vs. ExPASy TrEMBL
Match: A0A6J1IZU6 (ankyrin repeat-containing protein NPR4-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111479945 PE=4 SV=1) HSP 1 Score: 90.5 bits (223), Expect = 4.7e-15 Identity = 57/108 (52.78%), Postives = 74/108 (68.52%), Query Frame = 0
BLAST of Sed0026942 vs. ExPASy TrEMBL
Match: A0A6J1IX06 (ankyrin repeat-containing protein NPR4-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111479945 PE=4 SV=1) HSP 1 Score: 90.5 bits (223), Expect = 4.7e-15 Identity = 57/108 (52.78%), Postives = 74/108 (68.52%), Query Frame = 0
BLAST of Sed0026942 vs. TAIR 10
Match: AT3G13950.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G13266.1); Has 339 Blast hits to 265 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 339; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 50.4 bits (119), Expect = 1.0e-06 Identity = 22/44 (50.00%), Postives = 31/44 (70.45%), Query Frame = 0
BLAST of Sed0026942 vs. TAIR 10
Match: AT5G50140.1 (Ankyrin repeat family protein ) HSP 1 Score: 41.6 bits (96), Expect = 4.9e-04 Identity = 21/59 (35.59%), Postives = 39/59 (66.10%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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