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Sed0026815 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CCAGCTCTGTCCTCAACTGCAAATAAATAAATAAATAAATAAAAAAGGAAAAAAAGAAAGAAAGAAAAAGGACCCCATTTCATTTCTCACTGTTCTTCTTCATAATCTCTTCCTTTTGGATGCTCCCTTCCTCTCTCTCAGAATGAAAGTTTTAGGCTTTAGTTTGTGGAAATGGCAGTTTTTAAGGTTTGGAAACAGAATAGCAAATTCTGGGTCTTCAATTTCTTATGTGGATGATCCAAAAAAGCCACCTTTTTGTTGTTCATCTCCTTTGAGACACTTGGTTTTGAAGCTCAAATCTCAGTGGAAGCACAACTTGAGATTGCAAAAGAGAACAGTTCAGTACAGTTATGATCTTCAAAGCTATTCTCTTAACTTTGATGATGGCTTGCTTCATTGAATTATTTTAGTTTGAATTCTCTCTGTTTTTTTGGTCATATTTCCTTTTCTTTTCTTTTTGTTCATACCCATTTCTGTAAATTGTGAAGAAATAATGGTCTTTGATGGGTTCTTTCCAAAACTAAGAATTATAAAATGGGTTTGTTTTGGTTTCTTTTTAGAAGGCCTGCTTTGGGAGATAGAGGGGGGGATTTTTGTTTTTGTTCATGTAATTAACTCTGAGATGGGGGTTTTTGCATATACTTAGCTGCTTCTTCTCTAACTTCCAATAATTAGATTTGAAAATTGCTTGGAAACCTTGTTGATTTCACCTAATTTTGTTGCTGTTAAATTATTTCTGCCTTTGAATGTTGTGTCTGATATTTGCTTTGAATGATTTACTACAAGTTTATGTACTAATCAGGGTTTCTGTTATTTTTTTTTCCTCATAATTGTTGCTTAAAGATATCTGTGTTCAGTTTGAGATAA CCAGCTCTGTCCTCAACTGCAAATAAATAAATAAATAAATAAAAAAGGAAAAAAAGAAAGAAAGAAAAAGGACCCCATTTCATTTCTCACTGTTCTTCTTCATAATCTCTTCCTTTTGGATGCTCCCTTCCTCTCTCTCAGAATGAAAGTTTTAGGCTTTAGTTTGTGGAAATGGCAGTTTTTAAGGTTTGGAAACAGAATAGCAAATTCTGGGTCTTCAATTTCTTATGTGGATGATCCAAAAAAGCCACCTTTTTGTTGTTCATCTCCTTTGAGACACTTGGTTTTGAAGCTCAAATCTCAGTGGAAGCACAACTTGAGATTGCAAAAGAGAACAGTTCAGTACAGTTATGATCTTCAAAGCTATTCTCTTAACTTTGATGATGGCTTGCTTCATTGAATTATTTTAGTTTGAATTCTCTCTGTTTTTTTGGTCATATTTCCTTTTCTTTTCTTTTTGTTCATACCCATTTCTGTAAATTGTGAAGAAATAATGGTCTTTGATGGGTTCTTTCCAAAACTAAGAATTATAAAATGGGTTTGTTTTGGTTTCTTTTTAGAAGGCCTGCTTTGGGAGATAGAGGGGGGGATTTTTGTTTTTGTTCATGTAATTAACTCTGAGATGGGGGTTTTTGCATATACTTAGCTGCTTCTTCTCTAACTTCCAATAATTAGATTTGAAAATTGCTTGGAAACCTTGTTGATTTCACCTAATTTTGTTGCTGTTAAATTATTTCTGCCTTTGAATGTTGTGTCTGATATTTGCTTTGAATGATTTACTACAAGTTTATGTACTAATCAGGGTTTCTGTTATTTTTTTTTCCTCATAATTGTTGCTTAAAGATATCTGTGTTCAGTTTGAGATAA ATGAAAGTTTTAGGCTTTAGTTTGTGGAAATGGCAGTTTTTAAGGTTTGGAAACAGAATAGCAAATTCTGGGTCTTCAATTTCTTATGTGGATGATCCAAAAAAGCCACCTTTTTGTTGTTCATCTCCTTTGAGACACTTGGTTTTGAAGCTCAAATCTCAGTGGAAGCACAACTTGAGATTGCAAAAGAGAACAGTTCAGTACAGTTATGATCTTCAAAGCTATTCTCTTAACTTTGATGATGGCTTGCTTCATTGA MKVLGFSLWKWQFLRFGNRIANSGSSISYVDDPKKPPFCCSSPLRHLVLKLKSQWKHNLRLQKRTVQYSYDLQSYSLNFDDGLLH Homology
BLAST of Sed0026815 vs. NCBI nr
Match: KAG6606355.1 (hypothetical protein SDJN03_03672, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 160.6 bits (405), Expect = 5.9e-36 Identity = 76/85 (89.41%), Postives = 77/85 (90.59%), Query Frame = 0
BLAST of Sed0026815 vs. NCBI nr
Match: KGN58293.1 (hypothetical protein Csa_017624 [Cucumis sativus]) HSP 1 Score: 129.8 bits (325), Expect = 1.1e-26 Identity = 68/94 (72.34%), Postives = 74/94 (78.72%), Query Frame = 0
BLAST of Sed0026815 vs. NCBI nr
Match: EOX94342.1 (Uncharacterized protein TCM_003929 isoform 1 [Theobroma cacao]) HSP 1 Score: 80.9 bits (198), Expect = 5.9e-12 Identity = 38/77 (49.35%), Postives = 51/77 (66.23%), Query Frame = 0
BLAST of Sed0026815 vs. NCBI nr
Match: PPD85034.1 (hypothetical protein GOBAR_DD18023 [Gossypium barbadense]) HSP 1 Score: 76.6 bits (187), Expect = 1.1e-10 Identity = 37/86 (43.02%), Postives = 56/86 (65.12%), Query Frame = 0
BLAST of Sed0026815 vs. NCBI nr
Match: KAF3967419.1 (hypothetical protein CMV_008585 [Castanea mollissima]) HSP 1 Score: 76.3 bits (186), Expect = 1.5e-10 Identity = 41/82 (50.00%), Postives = 51/82 (62.20%), Query Frame = 0
BLAST of Sed0026815 vs. ExPASy TrEMBL
Match: A0A0A0L8W7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G608720 PE=4 SV=1) HSP 1 Score: 129.8 bits (325), Expect = 5.4e-27 Identity = 68/94 (72.34%), Postives = 74/94 (78.72%), Query Frame = 0
BLAST of Sed0026815 vs. ExPASy TrEMBL
Match: A0A061DPJ4 (Uncharacterized protein isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_003929 PE=4 SV=1) HSP 1 Score: 80.9 bits (198), Expect = 2.9e-12 Identity = 38/77 (49.35%), Postives = 51/77 (66.23%), Query Frame = 0
BLAST of Sed0026815 vs. ExPASy TrEMBL
Match: A0A1R3K809 (Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_10585 PE=4 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 9.3e-11 Identity = 37/78 (47.44%), Postives = 51/78 (65.38%), Query Frame = 0
BLAST of Sed0026815 vs. ExPASy TrEMBL
Match: A0A2N9IXX4 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS57087 PE=4 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 9.3e-11 Identity = 40/77 (51.95%), Postives = 50/77 (64.94%), Query Frame = 0
BLAST of Sed0026815 vs. ExPASy TrEMBL
Match: B9SKN8 (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_0542820 PE=4 SV=1) HSP 1 Score: 75.5 bits (184), Expect = 1.2e-10 Identity = 42/89 (47.19%), Postives = 60/89 (67.42%), Query Frame = 0
BLAST of Sed0026815 vs. TAIR 10
Match: AT5G44005.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 50.4 bits (119), Expect = 8.0e-07 Identity = 29/85 (34.12%), Postives = 48/85 (56.47%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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