Sed0026811 (gene) Chayote v1

Overview
NameSed0026811
Typegene
OrganismSechium edule (Chayote v1)
DescriptionRNase H domain-containing protein
LocationLG09: 9911751 .. 9931834 (-)
RNA-Seq ExpressionSed0026811
SyntenySed0026811
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTAGGGTGAGAAGGCAAGAAGAGCTAGATTTGAAAAAGTTAAAAAGTTGCAATCCCTCGATGGACGTAATGAAGAAAATCAATACCAGTGTAGAGGAACTAGAGGAGAAGATATTGACTGTTCTATCGGGAAAGAAGTGGAAACGCCAAGCTCGGCTAGGAGTCAAAAAGGAAAAGAGTCAGAAAGTGGTGGGATCAGGTATTTCAGCAAGCAGGTGCGGTGAAAAACATGCCTTGGAACAAACCGAGCAGGTTGGGATAGTAAAATGGGTCACTTTAATTACATTGTGAGTAACAATGGGATATCGGCGGAGGCTGCTGAGCAGTCTCGCCGGATGCAATGAAAACGCTATGTTGGAATGCTCGGGGGTTGGGAAACCCCCGAGCCCTTTGGGCGCTTCGTCATGAAGTGGTCAAGAATAAAACAGATCTAGTTTGTATTGCGGAGTCTAAATACTGTGAGGAAGTGGCTGCTAACCTTAAGTGTTCGCTGGAGTTTGGTAGCTGCTTCTGCGCTCCTTGTAAAGGTCGGAGTGGTGGTCTCATTTTGTTTTGGAAGTCTTCTACGAAGGTTACTGTTCTGTCTTGTTCTCAAGGTCATATTGATGTCTCAATCAAAGGTCAAAAAAAGTGGTGGAGGTTTACAAGATTTTATGGAAACCCGGTTCAGTCCAAGCGTAGGGAGTCGTGGAATCTGTTAAGGAAGCTGTCTTTGTGTTCTAATTTGCCTTGGATCATTGGAGGTGATTTCAATGAGATTCTTGAGGAGGGTGAGCAACTGTTCGGAGTGTAGATGAGCAAAGCTAGTATGGATGATTTTAGGCAAGCGTTAGATGAGTGCTCGCTCATCGATCTGGGCATTGCTGGGGATCAGTATACTTGGAGCAAAAACAAAAAATCTGCTAGTGCTATTAGAGTGCGGCTTGATAGGTATTTCACAAATCCTCTTTTTATTTCAAATTCCTATAAAATCTTTATTAAGCACTTACATTTTCACTCTTTGGATCATAGATTGATTTTAGCCGAATTTTTTTGGGTCAATCCTAGGCATGAGTGGTTTAGGGGGGGTCCTAGACCTTTGAGATTTGAGGATTGTTGGGTTAAATTTGAGGAGTGTAAGAATATCGTGAGTGCGCGGTGGGAGGTGAATGGTGGCAGATCGATTAGGGCCCTTGATTTGGCTAATAGTGTTGCGATTTGTTTGAAAGAGCTTGCTAGCTGGAATAAGATTAGGCTAAAAGGCTATTTGAGGAAGGCTATTGAGGCTAAAGAAAAAGAGATTTTTCAGCTGTATGAATCTGGGTCAGTTGGTTATGACCAGAGTCAGAAAGCTGAAGCTGATCTTGAGTTGCTTATGAAGGAAGAAGAGATTTTTTGGAAGCAGAGATCGAGGGATGTCTGGCTTAAGTTGGGGGATAGGAATACCAAATGGTTTCATATGAGAGCTTCCCTTCGTAAGAGAAGGAATAGAATTGAGTTTTTAATTGACCCTTTTGGGATTAGACATACTAGGGAGCCAGAAATTGTTCTAGTAGGGGAAAATTATTTTGGTAATCTTTTCTCTGCCCAGCAGAGATCTGAAGAGGCTGAAGAGAGAATCTTAAGGGGAGTGTCTTGCAAAATCTCAAATGAGGATTCTGTTGCTTTAGATAGGAGATTTTCTAGAAGCGAGGTGAAGGTGGCTCTCAAAAGTTTGAATTCGTCCAAAGCTCCGGGCCCGGATGGAACTAATGCTCTGTTCTTTAAAAATTACAAGAATGTAGTTGGGGATGATGTGGTGCGCTTTTTTCTGGGTGTGCTTAATGACGGGATGGATTTGTGGCCGATTAATAAAACGTCCTCTGTCCTCATCCCTAAGATGCATTCTCCATAAAAAAATTGAGGACTTTCGCCCTATCAGTCTTTGTAATACAGTGTACAAAATCATTGCTAAAACGATGGCCAATAGGATGAAACTAGTTCTCGATAAAATTATATCCCCTAATCAGGCTGCTTTTGTCCCAAGTAGGCTTATGTAAGGGACCGACCCGAATGGGGCACTAAATGGGCCCTTACCCCAATGCATGCAATCAAAATAAAGGACATTTAAACAGACATGATTTCGGATTCCAATTAAAACAAAACATTCAAAATAACCCCTTTAAAAACTAAACAATTTCCTGGAACTCGTCCTGTTTCAAGCACTGTTCCAAGATAAATACATTTCCAAAGTATACTCCGATCAGAGATTTCTTAAAATCATTCAAAACATGTCTAAATATAATAATGCTTTGGAATCCACAACATATTGAGAAAACATCCTAGGGCTCGTGTGTGCTACATGCATTCTGGGGAAAATAAAACATAAAGAGTCATAACACAAAATCTGAGTTTGATGATTGAGCCCCATGATCACAGACTCCTCCTTCAGCCATCTTGTCTCGCAACTTGGTTACTCGTGGAAAAACCACAGTAAGGGTGAGTAACGAATTACTCGGTAAGAATCCCCAACAGGGGTACAATACGATATACATGGTCATCTCGATGAGCGTATGCAAGCTATGAATATAAACACAGAATAGAGCACATAGCTTAGCCCACACTTGGGCCTCGGATGCCGGCTTAGGGTCTTAGTCCGGAATAATATCACCACACACGATCCAATATATAAGTCGCCTATACGAGAAACAAGTCCGGCCTCACTGTCTCATCGTCGACGAAAGGTACATCGGCTCACAATCCCGAGGAGCTCTCCGGTCGGTCTTTGTAATGAGCGTAAGCATGCACCGCGTGCTCTGCGCAGACTATGGGGGGTTGCTGGTCCGGAGGCAAGCCGCCCATATCCGATCACCACGCCTAACTAAATCTTTGGATCGGTGTCACCGACATAGGGTGTGAGACACGACACGTAAACTATGTCACTGAACCACCGCACCTAGGGCCAAGGAACGGTCGTGGTAGGCTTACACCAGAAGCCGCCCTTGCCTTAACAGTGGCAATCGGGGGCTCTCGCCAAACATGCCGAGGACATGCCGATCGCCAGGGACGAGGCAATGCCAAGTCATCATCCCGACCGTTGGGGCATTAACAACTGCCACCCTCACCCAAGATTGCAGGGCCTACCGCTTGGGTTAGCTAATCCCTCACGGGGTCCAGGGACGGAATGACTTGCTTGACGTCCCTGCCATGGATGCAAGGTTCTTTATGCATCAGGCCCGGATGATGCTATCTACCTGCAATTCTAACATGCCCTAGCAAACAGCAAAAAATTCCATAAAATCCAATACGTGCTCAATAAGAATACAACGAGCCTAGCATGATACTACGAAGCAAGGAACAGATACGAGCATGCTAGAAAGGATCAACCTAGCATGGATTAACATGAGAATTAATCAAGAACAACATGCTAATCGGGAATTCAGAATTGAGTACCTAGTGTAACGGCCCGGAAAATTCATCTCGGTCTTCCCGGGAGGCCCAAGGGCATTTTGGTAATTTTGGGTCGGGCCGGTTTTGAAATTTAAAATTGCCGGAATAATTACGAGTCAATTTGAATAGGATCGGGATTTTTGGTGAAGGCGTTTGGGCTTGGGAAGGAGCAAAAATTAATAGGGAATTAAATAGCGCGTCGAGCAGGAATCGAACCAGGGCCATGTCGCATGCTAGGCCGAGGCACACCAGTAATGAGCCACCGCGCGCGCGTTTGTTAATCTAAACGCGCGTTCTATTATTTAAGCCTGCTCGTCCCCTGTTTTGGTTTAAAAGGCAACTCGCCCGAGTTTCGCCCCACTCTTCTTCTTCTTCTTCCTCGCGATCACCCCCGACCGACAGTCAATTTCTCTCGATCCTCTTCCTTCTCCAGCTCCGTTCGACCAAGCCTTGCCTCCAATTTGAGGTCGTCTTCCATCCCCAGAGCGGTGGTGGTAAGCTTCTTTTCTCTTTTCTTTCAAAAGAATTCGATTCCTTTCCCTAGTTTCGTTTCCGTTCATCGGCCGATTTGAGGCGATTTGAAGTATGGGTTTTGTGCGGCTAGTGTAGGGAGTTCTTCTTCAAAGAATCGAGCGTCGAATCCCCGTGGATCGCTTGGATTTGTGTCTTTGTTCGCCCGCTTCGCGCGGAAAACAGAGCCCTTGTTCGTCGAGCTCGCCAAACGCTGCCGTCCGTCGTCTGCGCGCTGGCGCGCGCTCGCAGCTCCGCAACGCGCCGCCGAGCCCCTCGCCGCGAAGTCGTGCGCGCGCGAGCGCCCAGCCGAAGCTTCGTGCTCGCCTTCGCATCATCACCGCAGCAGCGCAGCAGCGTCATCCGCAGCGTCCGCGCTCTGGCCAACAGGCGCACTCCAAGACGCCAGCTCGCCATTTCGCGCCCAGCGCGCCCATCAAGCCCTCCTTTGTTGCCGTTCGTGCAATCGGCTCGTTCGTGCGTTAAATCGTGCCTCGTGAGTTGCTCCCGGAGCCGAGCCTCATTTATTTTATTGTATTTAGGCCTATTGTGTGATTATTGTGATGATTGATAGGTTCCCGTAGCTAGATCGAGATTGTTCGCGACTTAGGATTTCGTGCCAAACCGTCCCGACCAAGGTAAGGATTTCTTCACAGGGGTTGTGTGGACCTGCGATATTATATGTGATTGTTGATTGATTGCTTGTTTGTGATTATTGACATGTGTAGCTAGGTGCTTCAATCTGAATTCTGTTAGCATGATTTCTTGATTAATTCTCATGTTAATCCATGCTAGGTTGTTCCTTTCGGCATGCTCGTGATCTGTTCCTTGCTTCGTAGTATCATGCTAGGCTCGTTGTATTCTTATTGAGCACGTATTGGATTTTATGGAATTGTTTCTTTGTTGCTAGGGGCGAGTTAGAAGTGCGGTAGATAGCATCATCCGGTCCGATGCATAAAGAACCTTGCATCCATGGCGGGGACGTCGAGCAAGTCATTCCGTCCCCTCGGACCCGTGAGGGATTTGCTAACCCGAGCGGTCTGCAATCTTGGGTGAGGGTGGCAGACTGTTAAATGCCATAACCGTCGGGATGATGACTTGGCATTGCCTTGTCCCCGATAGTCGGCACGTCCTCGCGTGTTAGGCGTAGCCCCCGATTGCCACTGTTAAGGTAAGGGCGGCTTCTCGGTGTAAGCCTACCACGACCCGTTCCCTTAGCCTCATTTGCGGTGGTTCAGGTGACATAGTTTAAGTGTCCGGTCTCACACCCTATGTCGGTGACACCGATCCAAAGATTTAGTTAGGGCGTGGTGGACTGGACATGGGCGCTTGCCTCTAGACCCGGCACCCCATAGTTCGCAGTAGCACGCGCGGTGCATGCTTACGCCATTACTGGCGCCGACCGGAGAGCTCCTCGGGATTGTGAGCAGTGTACCTTTCGTCGACGAAGCGATGAAGCCGGTGAGGCCGAGACTTGTTTCTCGTATAGGCGACTTATGTATTGGATGTGTGATGATTTTATTCCGGACTAAGCCACCGAAGTTGGCATCCGAGGCCCAAGTGTGGGCTAAGCTATGTGCTCTATTCTCGTGTTATATTCATAGCTTGCATACGCTCATCGAGATGACCATGTATATCGTATTGTACCCGGTTGGGGATTCTTACTTGAGCGATTCGTTGCTCACCCTTATTATTGTGGTTTTTTCCACAGGTAACCGAGTTGCGAGACAGGATGGCTGAAGGAGGAGCTGTGATCATGGGGCCCAGTCTTCCAACTCTGTCTTTTTGTATTATGACTCTCGTGTGTTTTTGTTTTCCCCTGAATGCATGTGACGGGGGCACTGAGCCCTAGGATGTTTGTAAATATTTGTGGATTCCAAAGCATGTTGTATCCGAACAGGTTTTTGAATGGCTTTTTAGTAAATCTACGATCAGAGTAAACTTTGGAAATGTATTTATCTTGGAGCAGTGCTTGGAAACAGGGGGAGTTTGTGGAAAATGTCTAGTTTTTAAAGGGATTATTTTGAATGTTTTGTTTTAATTGGAATCCGAAATCATGTCTGTTTTAAATATCCTTTACTTTGAATGCATGCATTGGGGTAAGGGCCCATTTAGTGCCCCATTCGGGTCGGTCTCTTACAATTGGTATCAGAGCTCAGAGTCATAAATTCTGTAGTATGACCTGTTGTTGTAGGTCGTTTTCCCATGATCACTAGCACTCCGACAGTCATCAGGTACGCCTAAGTTTACTATTTGTTGTTTAAAAAGGGTTAAGAATTTACAATACCGTCATCTAGTGTATGCCTTGTGTAGTATTGTGGAGCGGAGACGAGCATGTTTCGACTCGTTATTGGTTTGGGTGTAGATCGCCAAAGATGCCAGTTACCCGCGCCGGAAGAGGACGCCCGAGAGGAGACCGAGGTGTCGGGATCGGATCGACACCGCAGGACATCGTCCCAAGCCGAGACGGATAGCATTCCGCCCGTAGTAGCTCCGGTTGAGGCCAGAGTAGGCATTGAGGCGTCAGGCGCCGTGAGATCGCTCTTGGAGCAGAATTTGCTAATTCCATGAGGTCTATGGTGGTTGACTGTTGAGTGGCCGGAGGCGAGACCCGAGCTTTATTGGCGTAAAGACAGGCGGGAAGAGTCCCGAGCTCAGTTGAGCGGTGACTCGTTTGTTTCAAAGAGGGCAAAGAAGACACTGACTCCGCAAGAGCCAGCAGCCTATGAGGCAGAAGTGGCAGAAGGTGCCGATGAACTTGGTAAATGGTTGAAGGACTTCGTAAAGTGGAACCCTAATAAGTTTGACGCCACGGTGACGCTTTATCGCAACGGATGGATTGCCCATTTGGAGTACACCTTCCTAATTATGGTGTGCCCCGATGTGCAGAGGCCGAGGTGTGCGACCCATGCGTTAGGGGCGTAGCTAGATGGTGGTGGGAGTCCACCTTGAGCGAGAGACCAGCTGGGTCTCCACCTGCCACCTGGGAGTTCTTTAAGTCGGAGTTCAGGGTCAAATATATTAGCGATGAGGCTCAAGAGAAGATGGTAGCGCTTTTCCAGAATCTGCAGCAGGTTCGATTCTATTGAGGAATACGAAAGGAAGTTTCTGAGTATGGCTATTTTGCTCGCGGTGATAGCGACCCTCGAGTTGAAAATTCGAAAGTTCATTTTCAGTCCGAGGCAGGTGTGTCTCGGGATGTCGAGCCCGCCCCTATCACTTATGCTAAAGCGGTTGGTGGCCACTATTTACAATGGGAAATATCTCGTTGAGCGGACCGTCGCCGCTCCGGGTGCGCGTCTGTCCCGGCCGTAGTGGGGCGTAAGAGAAGGTTTGAGTTGAGGCGGCGGCGGCGCCGCCAAGGGGCGATTCGAGCAGGATCAGCGTAGGATTCCGCCCGATTCGCCCCTCGCCAGCAGGCGGTCCTAAGCGAACTCCTACTTGTGCCACTTGTGGAAGAGCCCACCGGAGCTTGTCGACCGGGCTCAAAGCGGTGTTTCCGATGTGGAAAGGAGGGCATATGATCCGTTCTTGTGATCACCGGCTATGGCGATTCGGCCGTGCTGCAGCAGCAGCAGGCGGGTGTTCGCTCACGAACCGTCGGGAGGCTGAGCGTGCAGATGCCGCAGTGGCGGTACGCTTCTTGTTTTGGATCATTGTGCATTTGTCTTGTTTGACTCTGGCTCTACGCACTCGTTTGTATCTGTATTGTTTGTTGAGCATGCTAGGTTGAGATTAGAGCCTTTAGGTTTTGAATTATCTCGTTGCTACTCCTTCGGAGTTAATATGTTAGCTAAGGATAAGATTAAGGATGGCCGGATCGAGATATCCAGGGGAGTTGCTGGTAGCTACGCTCATAGTTCTACCCATGAGTGGTTTCGATGTGATCCTTGGTATGGAGTGGTTAGCCGCTAACCACGCATTGATTGACTGCCACCGGAAGGAAGTAGTGTTCAAAGCGCCGGGTCGCCCGACTTCAAGTTTCGTGGAGCCCGTGGTGGAGTTTGCCCGCCGATGGTGTCGATTGTGAAAGCCCGTCGTTTGCTAGCTCATGGAGCTTGGGGCTACCTAGCCAAATTGTCCAGAGCCATCCTCATTGATCGTTGATCAAGTGCAAGGTTGTGCGAGAGTTTGCGGATGTGTTTCTCGAGGAGTTCTGGGGTTGCCCCGAAGAGAGAGGTTGACTTCACAATTGAGCTCGAGCCGGGGACCCTCCCTATCTCGAAGGCTCCAGATCGTATGGCGCCCACCGAGCTAAAGGGCGAAGGTTCATTTGCAGGAGATGTTAGATCGAGGATTCATCCGTCCGAGTGTGTCGCCGTGGGGAGCGCGCGGTGTTGTTTGTGAAGAAAAAGGATGGTTCGATGCGCCTATGCATTGACTATCGTGAGCTTAATAAGGTGACAAGTGAAGAATAAGTATCCGTTGCCCCGTATCGATGATTTGTTCGATCGGCCGAGGAGCTTCCGTGTTCTCCAAGATAGATTTGAGATCCAGGTATCACCGGGCTATGCGGATTAGGGACGCCGACATTCCTAAGACGGCGCGTTCAGTCTCTAGATATGGGCACTACGAGTTTGGGGTCATGTCGTTTGGATTGACGAATGCACCAAAGCAGCGTTCATGGACATGATGGATAGGGTGTTCAAAGCATTTTTGGACGGCTTCGTCATTGTGTTCATTGGCGATATTTCGATCTATTCAAGGACGAGAAAGGATCATGCGAGCATTTGAGGAAAGTGTTGCGAAACCTTGAGGGAAAACCACTTTTATGCGAAATTTTCCAAATGTGAGTTCTGGTTGGAACAAGTGGCCTTCTTAGGTCATATAGTCTCGAGAGATGGTATAGTCGTGGATCCTGCAAAGATTGAGGCCGTGAGTTCGTGGGCGAGCCGACTTGATTCACGAGATACGCAGCCTTCCTAGGTTTGGCAAAGTTACTACCGTCGGTTTGTTAAGGATTTTTCCGCCATAGCCTCGCGCCTCACTCGTCCCGACGAGGAAGGGTGTCGAGTTTGTTTGGGACGGTAGGTGTGATGAGAGCTTTGCTGAGCTCAAGCGCGATTTGACTTGACTTGGCCCGATGTTGGCGATCCGGAGGGGAGGGGTGGTTTCGTGGTTTCTGTGATGCTTCCAAGTTCGGGTTGGGTTGTGTGTTGATGCAAAGACGGGAAGGTCATTGCTTATGCTTCCGTCATTTGAAGCCATATGAGCAGAACTATCCGACTCATGATATGGAGTTAGCAGAAGTGGTGTTTGCAATCAAGATTTGGAGGCATTATCTATACGGTGAGCGGATTCGGATGTTTACCGATCACCGAGCCTCAAGTATCACATTTACCCGAGAAAGAGTTGAACATGAGGCGAGAGGAGATGGTTAGAGCTAGTGAAAGATTATGATTGCGAGATTCTGTACCATCGGGTAAAGCCAACGTTGTAGCTGATGCATTAAGTAGAAAGACGTCGCACTCAGATGTATCGTGAGTTCCCAGCCAGATTGCGAGAGAGAGTTCGAGCGGGTGAGATTGCGATATTCTTTGGGTGAGGTTCTTCGCAGAGTAGCTCGGTTTGTGATCCGACCATCGATTAGGCGGCGGATTATTGATAGTCGGTGAGTGACCTCGCACTTAAGAGGTTGGTTGATGAGTCGATGTTGTGGCGACTTTGATTTTGTATATTCACCAGATGCTGGGGTGACGTCTGAGGCCGGATGTGTGTTCCGGATGTTGCGAGTTTGCAGCGAGTTGCTCTCGAGAGGCCCATGATTCTCCGTTTACTTGGCACCGGGGTACCAAGATGTATCAGAGCGCACATCGGTGGATGGGTATGAAAAGAGATGTTGCGGAGTTTGTCATCGATGTCTCACTTGTCGGCAAGTGAAGGCACCAGCAGCAGACCACCGGATTATTTGCGGCCACCGAGTGTGCCTCGGTGGAAATGGGAAGAAATCTCCATGGACTTCATTTCGGGTTTGCCGAGGACTCGAGGAAGTTCACTCGATTTGGGTGATAGTTGACCGTTTGACTAAGAGCGCACACTTCATTCCGGTAGAGACACTTATACCGTGGAACATGGGGCGCATTGTGTTTTTAGAGCAGATCATTCGCTATCACGGTGTGTCCTGTGAGGATCGTATCGACCGTGATTCGAGGTTCACTTCGTTTCGGAGAGCGCTCGAGGAAGGGTTTAGGCATCGAGTGCGGCACTTCAAGATGACTTTTCACCCTCGCATCGATGGTCGATCGAGAGGTGAACCAGATTCTCAAGATATGTTGAGGGCTTGTGTGTTGGATTTCGGGCGATTGGGACCAAGATCTCAGATTCGATGGAGTTTGCATATAACAACGATTATCGATCGGCGGTCGGATGGCTCCATTTGAGGCTTTGTATGGCAAGCGTTGCCGATCTCCCGTGTTCTAGGAAGAGGTTGGTGATAGGCGAGTTTTGGGTCCCGAGTTGTTGCCGCAATTGACCAATGATCTCGCAAGTGGAAGATTAGAGCCCGTATGTTGTGACCCAGAGCGCATGTAAGAGTTATGCCGATGTTCGACGTCGGGATTTGGAGTTTGAGGTTGGTCAAGCATGTATTCTCGAAGGTCGCACCAATGCGAGGAGTTTTGAGGTTTGGCAAGCGTGGGAAAGCCGAGTCCCCGCTTTGTTGGTCCGTTTGAAATCCGGAGAGGATCGGCGTTGTTGCTTATCGATTAGCCTTGCCTCCGTCATTGTCGAAGGTACGCGGTGTATTTCATGTATCGATGTTGAGGCAAAGATGCGCCGGACCCGCCGCACATTATGGATTTTGAGCCTTTGCAGCTGAATGAAGATTTGAGCTTCGAGGAAAAGCCAGTGGGAATTCTTGCTTTTGAGACAAAGGCACTGCGTGAATCGTGAAATCCGGCTCGTAAAGGTTGGTGGAGGAGTCGAGTTACGAGGAAGCCACTTGGGAGCGGGAGGATGAGATGAGATTGATATCCCGAGCCGCTGTTCAGTCTTAAGTGACTTTCGAGGACGAAAGTCTTGTAAGGGGGGAGTATTGTAACGGCCCGGAAAATTCATCTCGGTCTTCCCGGGAGGCCCAAGGGCATTTTGGTAATTTTGGGTCGGGCCGGTTTTGAAATTTAAAATTGCCGGAATAATTACGAGTCAATTTGAATAGGATCGGGATTTTTGGTGAAGGCGTTTGGGCTTGGGAAGGAGCAAAAATTAATAGGGAATTAAAATAGCGCGTCGAGCAGGAATCGAACCAGGGCCGTGTCGCATGCTAGGCAGAGGGCACAGCCAGCCGAGCAACCGCGCGCGTTTGTTAATCTAAACGCGCGTTCTATTATTTAAGCTCGCTTCGTCCCCTTTTTTTTGGTTTAAAAGGCAACTCGCCCGAGTTTCGCCCCACTCTTCTTCTTTTTCTTCCTCGCGATCACCCCCGACCGACAGCCAATTTCTCTCGATCCTCTTCCTTCTCCAGCTCCGTTCGACCAAGCCTTGCCTCCAATTTGAGGTCGTCTTCCATCCCCGAGCAGCTGGTAAGCTTCTTTTCTCTTTTCTTTCAAAAAGAATTCTGATTCCTTCTCCCTAGTTTCGTTTCCGTTCATCGGCCGATTTGAGGCGATTTGAAGTATGGGTTTTGTGCAGCTAGTGTAGGGGAGTTCTTCTTCAAAGAATCGAGCGTCGAATCCCCGTGGATCGCTTGGATTTGTGTCTTTTGTTCGCCCCTGTTCGCGCGGAAAACAGAGCCCCTGTTCGTCGAGCTCGCCAGCGTGCCGTCCGTCTGCGCGCGATTTCGCCCCGCCCGGCCGCAGCGTGTCGCCCGAGCCCTCGCTCGCCGAGTCGTGCGGCTCGAGCGCCCAGCCGAAGCTCGTTCGCCGCATCATCACGCGCAGTTAGCAGCGCTCCGTCCGCTCAGGCGTGCGCACCAAAGACGCCAGCTCGCCGCCCATTTCTGCGCCCAGCCGCGCCCATCAAGCCCCGTTCTTTGCCCGTTCGTGCTGTCGGCTCGTTAAATGCGTTAAATCGCGTGCCTCGTGAGTTGCTCCCAGGTGAGCCTCATTTATTTTATTGTATTTAGGCCTATTGTGTGATTATTGTGATGATTGATAGGTTCCCGGTAGCTAGATCGAGATTGTTCGCGACTTAGGATTTCGTGCCAAACCGTCCCCGACCAAGGTAAGGATTTCTTACGGGGTTGTGTGGACCTGCGATATTATATGTGATTGTTGATTGATTGCTTGTTTGTGATTATTGACATGTGTAGCTAGGTGCTTCAATCGAATTCCGGTTAGCATGATTTCTTGGTTAATTCTCATGTTAATCCATGCTAGGTTGTTCCTTTTCGGCATGCTCAGACCATTTCCTTGCTTCGTAGTATCATGCTAGGCTCGTTGTATTCTTATTGAGCACGTATTGGATTTTATGGAATTGTTTCTTCGTTGCTAGGGGCAAAGTTAGAAGTGCGGGTAGATAGCATCATCCGGTCCGATGCATAAAGAACCTTGCATCCATGGCGGGGGACGTCGAGCAAGTCATTCCGTCCCTGGACCCCGTGAGGGATTTGCTAACCCGAGCGGCAGAGGCCCCGCAATCTTGGGTGAGGGTGGCGGATCGTTAAATGCCCCAACCGTCGGGATGATGACTTGGCATTGCCCTTGTCCTCGATAGTCGGCACGTCCTCGGCGTGTTCGGCCGTAGCCTCGATTGCCACTGTTAAGGTAAAGGCGGCTTCTCGGTGTAAGCCTACCACGACCCGTTCCTTAGCCTCACCGCGGTGGTTCAGCCGACATAGTTTAAGTGTCCGTGTCTCACACCCCTATGTCGGTGACACCGATCCAAAGATTTAGTTAGGCGTGGTGGATCGACATGGGCGGCTTGCCTCAGACCCGGCACCCCATAGTGCAGCAGAGCACGCGGTGCATGCTTACGCTCATTCTGGCGCCGATCGAGAGCTCCTCGGGATTGTGAGCGGTGTACCTTTCGTCGACGAAGAGACAGCCGAGGCCGAGACTTGTTTCTCGTATAGGCGACTTATGTATTGGATCGTGTGATGATTTTATTCGGACTAAGCCACCGAGTTGGCATCCGAGGCCCAAGTGTGGGCTAAGCTATGTGCTCTATTCTCGTGTTATATTCATAGCTTGCATACGCTCATCGAGATGACCATGTATATCGTATTGTACCCCGGTTGGGGATTCTTCTTGAGCGATTCGTTGCTCACCCTTATTATTGTGGTTTTTTCCACAGTAACCGAAGTTGCGAGACAGGATGGTGAAGGAGGAGCCGTGATCATGGGGCCTGATCTTCCAACTCGTCTTTTTGTATTATGACTCTCGTGTGTTTTTGTTTTCCCCGAATGCATGTAGCAAGGCACGAGCCCTAGGATGTTTGTAAATATTTGTGGATTCCGGCATGTTGTATCCGAACAGGTTTTTGAATGGCTTTTAGTAAATCTCGATCGGAGTAAACTTTGGAAATGTATTTATCTTGGAGCAGTGCTTGGAAACAGGGATGAGTTTTGTGGAAAATGTCTAGTTTTTAAAGGGATTATTTTGAATGTTTTGTTTTAATTGGAATCCGAAATCATGTCATTTTAAATATCCTTTACTTTGAATGCATGCATTGGGGTAAGGGCCCATTTAGTGCCTCATTCGGGTCGGTCCCTTACACCTAGCTATACATGTCAATAAACACAAACAAGCAATCAATCGGCAATCACATATAATATCGCAGGTCCACACAACTCCGTAAGAAATCCTTACCTTGGCGGGGACAATTTGACACGAAATCCTAAGCGCGAACGAACCCGAACTAGCTACCGAGAACCTATCAATCACAACAAAAATCACGCAATAGGCCTAAATATAATAAAACAAACAAGGCTCACCTGGAGCAACTCACTCAGGCGCGATTTAACGCACGAAGGGGCGATTGCACGAGCAACGGCAAAGAATCGGCTGGCCGGGCGAGCTGGGCGCAGAGAGGACGCGTGGCGCGCTGGCGCTATGACGAGCGGGGCGAAGCGAGCTGCGCGTGATTTAAGCGGCGCGGCGAAGGCGAGCGCGCGAGGCTTGGCGCTGGCGCTGGCGAGGACGCCCGCCGCTTGTGACGCGCGAAGCGCAGATGGGCGCCGCGACACGACTCGCGAGCAGGGCTCGGGCACGCGATGCGAGCCGGGCGACACAGGAGCGCCGCGAGCGCGGCGTGGCTTTCTGGCGCAGGCGCGCGACAGCGCCGATCAGACCGGCTCGCGCAGACGGATAAAGACGCCGCCGGCTCGCGTCGGCCGCTCGCTTTCTGCGCAAAGCAGGGCGATATAGAAATCCCGATTCGAGCGATCCACGGGGATTCGACAAGCGATTCTTTGATGGCGAACTCCCCTACACTAGCTGCACAAAACCCATACCTCAAATTACCTCAACTCGGCCGGAAATGGCGAAGCTCGGAACAGGGGTGAAGAACTCGAATTTTGAAGGAGAAGAAGAAGAGAAGAAGAAGAATAATAAAAGGGGAAGGAAAACTCACAGGAAAGGAGACGATCGCCGAGGGAGAACGGCGAGGGAGAGCTCGGTCGGTCGGGGAGAAATGGAGAAGGAAAATCGCGAGGAAGAAGAAGGAGGAAGAAGCTTCGGGCGAAAATTTCCTTTTAAACCAAAACGCGCATCAAACAGGCATATGTATTAGATCGCGCGTTTAGAATAACAAACGCGCCCAGTGGCTCGGCTGGCAGCGCCCCCTGCCTAGTACGCGACACGTCCTTGGCTTGAATCTCACTCGACGCGCTATGTAATTCCCTATTTAATTTTACTCTTTCCCAAGCCCAAATGCCTTCACCAAAATTCCCGATCCCAGTCAAATCGACTCATAATTATTCCGGCAATTAACAATTTCAAAATCGGCCCTGTCGACCCGACCCAAAATTACCAAAATGCCCCTGGGCCTCCCGGGAAGACCGGGACGAAATTTTCGGGCCGTTACAATATTCCCCCCTTATAAGACTTTCGTCCTCAAAAGTCACTTAAGATTAGAACAATGTGCGATGGAATCCGGCACGAACTGTCTCAACATCGAAACATGAAAAACACTGTGCACTGCTGACAACGACGGAGGGAGGGCTAATCGATAAGCAACCTTGCCGATCCTCTCAGAATCTCAAACGGGCCAACAAAACGGGGACTCAGCTTTCCACGCTTGCCAAACCTCAAACACCTCGCATCGGTGCAACCTTTAGGAATACATGTCGACCAACCTCAAACTCTCAATCCCGACGCCGATCAAAACATGTCTAAATATAATAATGCTGGAATCCACAACATATTCAGAAAACATCCTAGGGCTTCGTGCCCAGCTACATGCATTCAGGGGAAAATAAAACATAAAGAGTCATAACACAAAATCTGAGTTTGATGATTGAGCCCCATGATCACAAAACTCCTCCTTTGACCATCTTGTCTCGCATAACTTGGTTACTGTGGAAAAACCACAGTAAGGGTGAGTAACGAATTACTCAAGAAGAACCCCAACCAGGGGGTACAATACGATATACATGGTCATCTCGATGAGCGTATGCAAGCTATGAATATAAACACGAATAGAGCACATAGCTTAGCCCACACTTGGGCCTCGGATGCCACTTAGGGTCTTAGTCCGAAATAATATCACCACACGATCCAATATATAAGTCGCCTATACGAGAAACAAGTCCGGCCACGGCGCTCTCATCGTCGACGAAAGGTACACCGCTCACAATCCCGAGGAGCTCCGATCGGTCTTTGTAATGAGCGTAAGCATGCACCGCGTGCTCTGCAGACTATATGGGGTTGCCGTGCGGAGGAAAGCTGTCCATATCCAGTCACCACGCCTAACTAAATCTTTGGATCGGTGTCACCGACATAGGGGTGTGAGACACGACACGTAAACTATGTCAGCCTGAACCACCGCATCTGGGGCCAAGGAACGGTCGTGGTAGGCTTACACCGAGGAAGTCGTCCTTGCCTTAACAGTGGCAATCGGGGCTACCGCCAAACATGCCGAGGACATGCTTGGCGTGCTTTGGGGGCGAGGCAATGCCAAGTCATCATCCCGACCGTTGGGGCATTAACAACTGCCACCCTCACCCAAGATTGCAGGGCCTACCGCTTGGGTTAGCTAATCCCTCACGGGGTCCAAGGACGGAATGACTTGCTCGACGTCCCTGCCATGGATGCAAGGTTCTTTATGCATCAGGCCCGGATGATGCTATCTACCTGCAATTCTAACCCGCCTAGCAAGCAAAGCAAACAATTCCATAAAATCCAATACGTGCTCAATAAGAATACAACGAGCCTAGCATGATACTACGAAGCAAGGAGGCAGATACGAGCATGCTAGAAAGGATCAACCTAGCATGGATTAACATGAGAATTAATCAGAACAACATGCTAATCGGGAATTGAATTGAGTACCTAGCTATACATGTCAATAAACACAAACAAGCAATCAATCGGCAATCACATATAATATCGCTGGGTCCACACAACTCCGGTAAGAAATCCTTACCTTGGCCGGGGACAATTTGACACGAAATCCTAAGCTGCGAACGAACCCGAACTAGCTACCGAGAACCTATCAATCACAACAAAAATCACACAATAGGCCTAAATATAATAAAACAAACAAGGCTCGGCTCGGGAGCAACTCACGAGGCGCGATTTAACGCACGAATCGCCGATTGCGACGAACGGGCAAAGAACGGGGCGGGCGGGCGAATGGGCGCGTAGCGAAGTGGGCGCGTAAGCGCGAAGCGCCATGCGGCGCTGGCCGCGCGCGGCGCGCGCGAGCAAACGTGGCGTGCGAGGAGCGGCGCGAGGCTGGCGGGCGCTGGCGCTGCGCGCGCGCGTCGCGTGTGCGCGAGCGCAGCGATGGCGCCGCGCACGACTCGGCGAGCGAGGGCTCGGGCGACGCGATGCGGAGCTGGGCGACACAGGGGCGCTCGGGCGCGGCGTGGCTCGGCGGAAGAAGCGCGCGCGCAGCGCCGACCGCCTATCGCTGCACAGCGGACGGACAAAGACTGCTGGAGAGCTTCGGCGTCGCTCTGCTTTCTCTGCGCGAAACAGGCGATGGAGAAATCCCGAATTCGAGCGATCCACGGGGATTTGACAAGCGATTCTTTGATGGCGAACTCCCCTACACTAGCTGCACAAAACCCATACCTCAAATTATCTCAACTCGGCCGGAAATGGCGAAGCTCGGAACAGGGGTGAAGAACTCGAATTTTGAAGGAGAAGAAGAAGAGAAGAAGAAGAAGAATAAAAGGGGAAGGAAAACTCACCGAAAAGGAGACGATCGGCGAGGGAGAACGGCGAGGGAGAGCTCGGTCGGTCGGGGAGAAATGGAGAAGGAAAATCGCGAGGAAGAAGAAGGAGAAAGAAGCTTCGGGCGAAAATTTCCTTTTAAACCAAAACGCGCATCAAACAGGCATATGTATTAGATCGCGCGTTTAGAATAACAAACGCGCCCAGTGGCTCGGCTGGCAGCGCCCCCTGCCTAGCACGCGACACGTCCTTGGCTCGTATCTCACTCGACACGCTATTTAATTCCCTATTTAATTTTACTTTTTCCCAAGCCCAAATGCCTTCACCAAAATTCCCGATCCCAGTCAAATCGACTCATAATTATTCCGGCAATTAACAATTTCAAAACCGGCCCTGTCGGCCCGACCCAAAATTACCAAAATGCCCCTGGGCCTCCCGGGAAGACCGGGACGAAATTTCTGGGCCGTTACAACTTATTTCGGATAACGTTATAATAGGCTTTGAGTGCATTCATTCTCTGCAATCTCGAAAGTCTGGCAGGCAGGGGTGGGCTGCACTCAAGCTTGATATGAGCAAAGCCTACGATCGTGTTGAATGGAACTTTTTACTTCGAATGATGGAAAGGTTGGGTTTTAGTCAGGCGTGGATTAGTCGTGTTTACAGGTGTATTTCTTTGGTCTAGTATGCGATTATGATCAATGGCACTCTTTATGGTGACTTTGTTCCGAGTCGTGGGTTGAGGCAGGGTGACCCTTTGTCTCCTTATCTTTTCCTCCTTTGCGCTGAAGGATTATCGTCCATGTTAATCAGGGAAGAATCTTTTAACTCCTCTCTTTATTTCAGGATTAATAATCATTGTCCCACGATCTCTCATTTATTTTTTGTTGATGATAGTTTGCTGTTTTTCAGGGCTAATGAGGAGTCTTGCAAAAAGATTCTGGATATTTTAAGCTGTTATAAGCAGGCTTCGGGTCAATTTGTGAACTACAAGAAGTCGGCTATGCTGTTTAGTGGGAACGTTAATCAGGGTGTCAATGGTTGTTTAAGTAATATTTTGGGGGTTAAAGTGAATGATAATCTAGGTATCCACTTGGGTATGCCTTCGCAAAATAGTAGGAATAAAATGGCTCTTTTCCAATCCATAAAGGGTAGATTGGACAAGTGTCTTCAATCTTGGAAAGGCAAGTTGTCAAGGTGGGGTAAAGAGGTCTTAATTAAAGCGGTGGGCCAAGCTATTCCTACATACACTATGAGCTGTTTCAAGTTATCTAAATCCTTTAATGAGGATTTGGAGAATCTCTGTGCGAGGTTTTGGTGGGGCGAGGATGTCAATAATAAGGGTAAGGCTCACTAATGAGTTGGAAGAATTTGGGGGTCAGCAAAGATCGGGGGGGTCTTGGTTTTAGGGATCTTAATCTTTTTAATCAAGTGCTCCTTGCCAAGCATAGTTGGAGAATTTTGCGCCATCCGGCTTGTTTGTTGAGCCAAGTGCTCAAGGGTAAGTATTTTAGCAATGGTGACTATCTGAATGCCCCTCTTGGTAGTCACCCCTCGTATGCGTGGAGAAGTATTATTTGGGGTCGTGACTTATTTCAGAAAGGTTATAGGTGGAAAGTGGGGAGCGGGAGTAAAATTTCTATGGGGGTTGACCCTTGGTTAAGGAGAGCTGGTAATCCAGTGGCCTATGGCGTGAGGTCGGAGTGGAAGAATAGGGTGGTTTCTAATTTAATATTAGCAGATTCGAAGTGGGATGAGAGTTAGATAGATACTATTTTTTGTCAAGATCATGCTGATATTATTCTTAGATCCCCTCTGTGTGCAAAAGGTGCCAAGGATGAAATTATTTGGAACCAAGACCCGTAGGGGATTTTCTCGGTAAAGAGTGCTTATCATCTGGCGTTAAATCTGGTCAATGCCTCTAAAGGGTGTTCATATGATTATGTGGAGTGTGCTAAAATTTGGAAAAGTTTCTGGAAGTTTGATATGCCTCCTAAAATTAGGTTGGGGGCTTGGGCAGTTATATCTAATGTTATTCCTTCTAAATGCAATGTTTATAATAGGGGGGTCGATACTAGTGTCTGGTGTTCTATTTGTGGTATGAGGCGGGAATCTAATGTGCACCTTCTTAAAAGTTGTAAATTTTCCATTAGTGCTTGGAAGCTGGTTTTTCCTTGGTTTTCTGACTTTGAGTTTTTTTTCAAGAATGTGGAGAATAAGGTGGGCTTTTGGGAGGGTCTCTCTCTCAGAATTCCCAAGAAGGATCGGTTCAAAGCCATAATTGTTATTTCAAGTTTATGGAACTTTAGAAATTCATGTTATAATAATAATTCGTTAGGGGAGTTCAAAAATCTTGAAGCTGTGATTTCTAGAACTATTAATTCCCATTGTTTGCTGCATGCAGATTCTTCTTTTGCTCGTGAGCTGGTCGGTTCGGAGGTGGTGGGGACTTGGACTCCCCCCCCTCAAGGCTGTTGGAAAGTAAATGTTGATGCATCTTTTTCGACTACTAATGGTTATGGCGGTATTGGGTGGGTTGTTCGTGATGGAAGGGCGAGGCCTTTGCTGGTTGGGTGGAAAGCTGGGCTCAAGCAATCCTCGCCCAAGATGTTGGAAGGCGAAGTCTTAAGAGAAGCACTGTTGCATTTACTGGAGATTGGCATTCGTTGGATTCCTCCCATTCTTGTGGAGTCGAACGCGTTGGAGGTGGTAAACACTATCAATGGGGATTCGTTGGATCTCTCGGAGTTCAACAACATTTGTGCTGATATTTTGGAGTCTCTTTCATTGTTGGGTTTGGGAAAAATTCATTATTGTAGGAGATCTTGTAATAGGGTTGCCGATGTGCTTGCTAAACAAAATGTTGTTTCAAGCTTTAAGTGGAACTAA

mRNA sequence

ATGGGTAGGGTGAGAAGGCAAGAAGAGCTAGATTTGAAAAAGTTAAAAAGTTGCAATCCCTCGATGGACGTAATGAAGAAAATCAATACCAGTGTAGAGGAACTAGAGGAGAAGATATTGACTGTTCTATCGGGAAAGAAGTGGAAACGCCAAGCTCGGCTAGGAGTCAAAAAGGAAAAGAGTCAGAAAGTGGTGGGATCAGATTCTTCTTTTGCTCGTGAGCTGGTCGGTTCGGAGGTGGTGGGGACTTGGACTCCCCCCCCTCAAGGCTGTTGGAAAGTAAATGTTGATGCATCTTTTTCGACTACTAATGGTTATGGCGGTATTGGGTGGGTTGTTCGTGATGGAAGGGCGAGGCCTTTGCTGGTTGGGTGGAAAGCTGGGCTCAAGCAATCCTCGCCCAAGATGTTGGAAGGCGAAGTCTTAAGAGAAGCACTGTTGCATTTACTGGAGATTGGCATTCGTTGGATTCCTCCCATTCTTGTGGAGTCGAACGCGTTGGAGGTGGTAAACACTATCAATGGGGATTCGTTGGATCTCTCGGAGTTCAACAACATTTGTGCTGATATTTTGGAGTCTCTTTCATTGTTGGGTTTGGGAAAAATTCATTATTGTAGGAGATCTTGTAATAGGGTTGCCGATGTGCTTGCTAAACAAAATGTTGTTTCAAGCTTTAAGTGGAACTAA

Coding sequence (CDS)

ATGGGTAGGGTGAGAAGGCAAGAAGAGCTAGATTTGAAAAAGTTAAAAAGTTGCAATCCCTCGATGGACGTAATGAAGAAAATCAATACCAGTGTAGAGGAACTAGAGGAGAAGATATTGACTGTTCTATCGGGAAAGAAGTGGAAACGCCAAGCTCGGCTAGGAGTCAAAAAGGAAAAGAGTCAGAAAGTGGTGGGATCAGATTCTTCTTTTGCTCGTGAGCTGGTCGGTTCGGAGGTGGTGGGGACTTGGACTCCCCCCCCTCAAGGCTGTTGGAAAGTAAATGTTGATGCATCTTTTTCGACTACTAATGGTTATGGCGGTATTGGGTGGGTTGTTCGTGATGGAAGGGCGAGGCCTTTGCTGGTTGGGTGGAAAGCTGGGCTCAAGCAATCCTCGCCCAAGATGTTGGAAGGCGAAGTCTTAAGAGAAGCACTGTTGCATTTACTGGAGATTGGCATTCGTTGGATTCCTCCCATTCTTGTGGAGTCGAACGCGTTGGAGGTGGTAAACACTATCAATGGGGATTCGTTGGATCTCTCGGAGTTCAACAACATTTGTGCTGATATTTTGGAGTCTCTTTCATTGTTGGGTTTGGGAAAAATTCATTATTGTAGGAGATCTTGTAATAGGGTTGCCGATGTGCTTGCTAAACAAAATGTTGTTTCAAGCTTTAAGTGGAACTAA

Protein sequence

MGRVRRQEELDLKKLKSCNPSMDVMKKINTSVEELEEKILTVLSGKKWKRQARLGVKKEKSQKVVGSDSSFARELVGSEVVGTWTPPPQGCWKVNVDASFSTTNGYGGIGWVVRDGRARPLLVGWKAGLKQSSPKMLEGEVLREALLHLLEIGIRWIPPILVESNALEVVNTINGDSLDLSEFNNICADILESLSLLGLGKIHYCRRSCNRVADVLAKQNVVSSFKWN
Homology
[Close]
BLAST of Sed0026811 vs. NCBI nr
Match: MCH81978.1 (ribonuclease H protein [Trifolium medium])

HSP 1 Score: 78.6 bits (192), Expect = 7.9e-11
Identity = 56/174 (32.18%), Postives = 89/174 (51.15%), Query Frame = 0 

Query: 48  WKRQARL-GVKKEKSQKVVGSDSSFARELVGSEVVGTWTPPPQGCWKVNVDASFSTTNGY 107
           W   A + GV  E S+   G+ +SF    +    +  W PP QG  K NVDASF  T+  
Sbjct: 408 WNEWATMNGVMAEASRPATGTATSF----IAYHALSRWQPPAQGYLKCNVDASFFDTHDA 467

Query: 108 GGIGWVVRDGRARPLLVGWKAGLKQSSPKMLEGE--VLREALLHLLEIGIRWIPPILVES 167
            G GW +RD + R +L G  + + Q+    +EGE   ++EA+  L++   R    +++ES
Sbjct: 468 TGWGWCLRDHQGRFILAG--SNIIQARLNTIEGEAMAMKEAISELIQ---RGYSHVIIES 527

Query: 168 NALEVVNTINGDSLDLSEFNNICADILESLSLLGLGKIHYCRRSCNRVADVLAK 219
           ++  V+  I       SEF+N+ + I   L L+   ++ + RR  N VA  LA+
Sbjct: 528 DSQIVIEAIFSRRHGSSEFSNLISHIKSLLLLVPNFEVKFVRRQANTVAHSLAR 572

[Close]
BLAST of Sed0026811 vs. NCBI nr
Match: CAB3482375.1 (unnamed protein product [Digitaria exilis])

HSP 1 Score: 77.4 bits (189), Expect = 1.8e-10
Identity = 55/166 (33.13%), Postives = 76/166 (45.78%), Query Frame = 0 

Query: 55  GVKKEKSQ--KVVGSDSSFARELVGSEVVGTWTPPPQGCWKVNVDASFSTTNGYGGIGWV 114
           GVK E+ Q  K  GS    A+     E    W+PPP G  K+NVD SF    G  G+G +
Sbjct: 82  GVKGEEKQHGKPAGSGRRKAKGNTTGEPDKKWSPPPAGWSKINVDGSFVEATGEAGVGVI 141

Query: 115 VRDGRARPLLVGWKAGLKQSSPKMLEGEVLREALLHLLEIGIRWIP-PILVESNALEVVN 174
            RD   + +  GW+     S     E E    A +  + +   W P P+++ES+   +V 
Sbjct: 142 ARDSVGQVIFSGWRVLFNCSD----EVEAEARACVEGIRLATEWAPGPVIIESDCARLVR 201

Query: 175 TINGDSLDLSEFNNICADILESLSLLGLGKIHYCRRSCNRVADVLA 218
            I  D  D SE   I ++ LE   +L   K+    R CN VA  LA
Sbjct: 202 LIQ-DGPDRSEIGFIVSEALELTQILLEWKVSLVGRDCNIVAHELA 242

[Close]
BLAST of Sed0026811 vs. NCBI nr
Match: CAB4273082.1 (unnamed protein product [Prunus armeniaca])

HSP 1 Score: 77.0 bits (188), Expect = 2.3e-10
Identity = 47/143 (32.87%), Postives = 78/143 (54.55%), Query Frame = 0 

Query: 76   VGSEVVGTWTPPPQGCWKVNVDASFSTTNGYGGIGWVVRDGRARPLLVGWKAGLKQSSPK 135
            V +E V +W  PP G  KVN DA++ +    GG+GWVVRD     +  G K  ++  S  
Sbjct: 1139 VQAETVTSWRKPPYGVLKVNCDAAWVSQTQMGGVGWVVRDSDGWMVQAGGKGDMRGGSAL 1198

Query: 136  MLEGEVLREALLHLLEIGIRWIPPILVESNALEVVNTINGD-SLDLSEFNNICADILESL 195
             +E E +REAL+  ++ G   +  + VES++L+V+  I G+ ++D++  + I  DI + +
Sbjct: 1199 AMEAEAIREALVACVQSG---LSKLEVESDSLQVIRMIGGEWNMDIA-VDTIVFDIKQLV 1258

Query: 196  SLLGLGKIHYCRRSCNRVADVLA 218
                     Y  R+CN+ A  +A
Sbjct: 1259 GQFQHCVFLYTPRNCNKAAHKIA 1277

[Close]
BLAST of Sed0026811 vs. NCBI nr
Match: EEE64789.1 (hypothetical protein OsJ_19645 [Oryza sativa Japonica Group])

HSP 1 Score: 75.5 bits (184), Expect = 6.7e-10
Identity = 46/136 (33.82%), Postives = 72/136 (52.94%), Query Frame = 0 

Query: 84  WTPPPQGCWKVNVDASFSTTNGYGGIGWVVRDGRARPLLVGWKAGLKQSSPKMLEGEVLR 143
           W PPP+G  K+NVD +F   +G  GIG V+RD   R LL  W+   + S  +  E E+L 
Sbjct: 43  WQPPPEGWAKINVDGAFDQGDGRCGIGVVIRDCLGRVLLSSWRYLRRCSQAE--EAELL- 102

Query: 144 EALLHLLEIGIRWIP-PILVESNALEVVNTINGDSLDLSEFNNICADILESLSLLGLGKI 203
            A    + +   WI  P+++ES+ L    +I G  ++ S +  +  +I  ++  L    +
Sbjct: 103 -ACSEGINLAAEWIHLPVILESDCLMATTSIAGKDMERSRWTFLLREIKAAVRRLQEVSV 162

Query: 204 HYCRRSCNRVADVLAK 219
           H+  R CNRVA  LA+
Sbjct: 163 HHVNRECNRVAHELAQ 174

[Close]
BLAST of Sed0026811 vs. NCBI nr
Match: EEC75749.1 (hypothetical protein OsI_12637 [Oryza sativa Indica Group])

HSP 1 Score: 75.5 bits (184), Expect = 6.7e-10
Identity = 41/136 (30.15%), Postives = 71/136 (52.21%), Query Frame = 0 

Query: 84  WTPPPQGCWKVNVDASFSTTNGYGGIGWVVRDGRARPLLVGWKAGLKQSSPKMLEGEVLR 143
           W PPP G  K+NVD +FS   G G IG ++R+   + +L  W+   + +  +    EV  
Sbjct: 400 WKPPPPGWVKLNVDGAFSAEQGIGAIGIIIRNSEGKAILSSWRFVRRCAEAE----EVEL 459

Query: 144 EALLHLLEIGIRWIP-PILVESNALEVVNTINGDSLDLSEFNNICADILESLSLLGLGKI 203
            A    L++   W+P P+ +ES+   V+  +     D S +  +  +  + +SL+   ++
Sbjct: 460 LACCEGLKLAAEWVPLPVELESDCTTVITRLKSKGEDRSRWAFLWRETKDVMSLVKEVRL 519

Query: 204 HYCRRSCNRVADVLAK 219
            +C+R CNRVA  LA+
Sbjct: 520 SHCKRECNRVAHELAQ 531

[Close]
BLAST of Sed0026811 vs. ExPASy TrEMBL
Match: A0A392M5F5 (Ribonuclease H protein (Fragment) OS=Trifolium medium OX=97028 GN=A2U01_0002773 PE=4 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 3.8e-11
Identity = 56/174 (32.18%), Postives = 89/174 (51.15%), Query Frame = 0 

Query: 48  WKRQARL-GVKKEKSQKVVGSDSSFARELVGSEVVGTWTPPPQGCWKVNVDASFSTTNGY 107
           W   A + GV  E S+   G+ +SF    +    +  W PP QG  K NVDASF  T+  
Sbjct: 408 WNEWATMNGVMAEASRPATGTATSF----IAYHALSRWQPPAQGYLKCNVDASFFDTHDA 467

Query: 108 GGIGWVVRDGRARPLLVGWKAGLKQSSPKMLEGE--VLREALLHLLEIGIRWIPPILVES 167
            G GW +RD + R +L G  + + Q+    +EGE   ++EA+  L++   R    +++ES
Sbjct: 468 TGWGWCLRDHQGRFILAG--SNIIQARLNTIEGEAMAMKEAISELIQ---RGYSHVIIES 527

Query: 168 NALEVVNTINGDSLDLSEFNNICADILESLSLLGLGKIHYCRRSCNRVADVLAK 219
           ++  V+  I       SEF+N+ + I   L L+   ++ + RR  N VA  LA+
Sbjct: 528 DSQIVIEAIFSRRHGSSEFSNLISHIKSLLLLVPNFEVKFVRRQANTVAHSLAR 572

[Close]
BLAST of Sed0026811 vs. ExPASy TrEMBL
Match: A0A6J5UAY2 (Reverse transcriptase domain-containing protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS20161 PE=4 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 1.1e-10
Identity = 47/143 (32.87%), Postives = 78/143 (54.55%), Query Frame = 0 

Query: 76   VGSEVVGTWTPPPQGCWKVNVDASFSTTNGYGGIGWVVRDGRARPLLVGWKAGLKQSSPK 135
            V +E V +W  PP G  KVN DA++ +    GG+GWVVRD     +  G K  ++  S  
Sbjct: 1139 VQAETVTSWRKPPYGVLKVNCDAAWVSQTQMGGVGWVVRDSDGWMVQAGGKGDMRGGSAL 1198

Query: 136  MLEGEVLREALLHLLEIGIRWIPPILVESNALEVVNTINGD-SLDLSEFNNICADILESL 195
             +E E +REAL+  ++ G   +  + VES++L+V+  I G+ ++D++  + I  DI + +
Sbjct: 1199 AMEAEAIREALVACVQSG---LSKLEVESDSLQVIRMIGGEWNMDIA-VDTIVFDIKQLV 1258

Query: 196  SLLGLGKIHYCRRSCNRVADVLA 218
                     Y  R+CN+ A  +A
Sbjct: 1259 GQFQHCVFLYTPRNCNKAAHKIA 1277

[Close]
BLAST of Sed0026811 vs. ExPASy TrEMBL
Match: B8AMK5 (RNase H domain-containing protein OS=Oryza sativa subsp. indica OX=39946 GN=OsI_12637 PE=4 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 3.2e-10
Identity = 41/136 (30.15%), Postives = 71/136 (52.21%), Query Frame = 0 

Query: 84  WTPPPQGCWKVNVDASFSTTNGYGGIGWVVRDGRARPLLVGWKAGLKQSSPKMLEGEVLR 143
           W PPP G  K+NVD +FS   G G IG ++R+   + +L  W+   + +  +    EV  
Sbjct: 400 WKPPPPGWVKLNVDGAFSAEQGIGAIGIIIRNSEGKAILSSWRFVRRCAEAE----EVEL 459

Query: 144 EALLHLLEIGIRWIP-PILVESNALEVVNTINGDSLDLSEFNNICADILESLSLLGLGKI 203
            A    L++   W+P P+ +ES+   V+  +     D S +  +  +  + +SL+   ++
Sbjct: 460 LACCEGLKLAAEWVPLPVELESDCTTVITRLKSKGEDRSRWAFLWRETKDVMSLVKEVRL 519

Query: 204 HYCRRSCNRVADVLAK 219
            +C+R CNRVA  LA+
Sbjct: 520 SHCKRECNRVAHELAQ 531

[Close]
BLAST of Sed0026811 vs. ExPASy TrEMBL
Match: B9FIH0 (RNase H domain-containing protein OS=Oryza sativa subsp. japonica OX=39947 GN=OsJ_19645 PE=4 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 3.2e-10
Identity = 46/136 (33.82%), Postives = 72/136 (52.94%), Query Frame = 0 

Query: 84  WTPPPQGCWKVNVDASFSTTNGYGGIGWVVRDGRARPLLVGWKAGLKQSSPKMLEGEVLR 143
           W PPP+G  K+NVD +F   +G  GIG V+RD   R LL  W+   + S  +  E E+L 
Sbjct: 43  WQPPPEGWAKINVDGAFDQGDGRCGIGVVIRDCLGRVLLSSWRYLRRCSQAE--EAELL- 102

Query: 144 EALLHLLEIGIRWIP-PILVESNALEVVNTINGDSLDLSEFNNICADILESLSLLGLGKI 203
            A    + +   WI  P+++ES+ L    +I G  ++ S +  +  +I  ++  L    +
Sbjct: 103 -ACSEGINLAAEWIHLPVILESDCLMATTSIAGKDMERSRWTFLLREIKAAVRRLQEVSV 162

Query: 204 HYCRRSCNRVADVLAK 219
           H+  R CNRVA  LA+
Sbjct: 163 HHVNRECNRVAHELAQ 174

[Close]
BLAST of Sed0026811 vs. ExPASy TrEMBL
Match: B9FGL8 (Uncharacterized protein OS=Oryza sativa subsp. japonica OX=39947 GN=OsJ_16976 PE=4 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 9.4e-10
Identity = 42/136 (30.88%), Postives = 70/136 (51.47%), Query Frame = 0 

Query: 84  WTPPPQGCWKVNVDASFSTTNGYGGIGWVVRDGRARPLLVGWKAGLKQSSPKMLEGEVLR 143
           W PPP+G  K+NVD +FS T+  GGIG + RD   + LL  WK   + +  + +E     
Sbjct: 491 WEPPPEGWAKINVDGAFSMTDNTGGIGVIARDSEGKALLSSWKYLHRCADAEQVEILACY 550

Query: 144 EALLHLLEIGIRWI-PPILVESNALEVVNTINGDSLDLSEFNNICADILESLSLLGLGKI 203
           E     +++   WI  PI++ES+ + V+  +  +  + S +  +       +  L   +I
Sbjct: 551 EG----MKLAAEWIRKPIILESDCVTVIGRMTAEDEERSRWTFLIRSAKAVMRSLQEVRI 610

Query: 204 HYCRRSCNRVADVLAK 219
            + +R CNRVA  LA+
Sbjct: 611 QHRKRECNRVAHELAQ 622

[Close]
BLAST of Sed0026811 vs. TAIR 10
Match: AT4G29090.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 54.3 bits (129), Expect = 1.5e-07
Identity = 40/155 (25.81%), Postives = 71/155 (45.81%), Query Frame = 0 

Query: 67  SDSSFARELVGSEVVGTWTPPPQGCWKVNVDASFSTTNGYGGIGWVVRDGRARPLLVGWK 126
           ++S   +  V     G W PPP    K N DA+++  N   GIGWV+R+ +     +G +
Sbjct: 403 AESCGTKPQVNRSSCGRWRPPPHQWVKCNTDATWNRDNERCGIGWVLRNEKGEVKWMGAR 462

Query: 127 AGLKQSSPKMLEGEVLREALLHLLEIGIRWIPPILVESNALEVVNTINGDSLDLSEFNNI 186
           A  K  S    E E +R A+L L      +   ++ ES++  ++  +N D +        
Sbjct: 463 ALPKLKSVLEAELEAMRWAVLSLSRFQYNY---VIFESDSQVLIEILNNDEI-WPSLKPT 522

Query: 187 CADILESLSLLGLGKIHYCRRSCNRVADVLAKQNV 222
             D+   LS     K  +  R  N +A+ +A++++
Sbjct: 523 IQDLQRLLSQFTEVKFVFIPREGNTLAERVARESL 553

The following BLAST results are available for this feature:
BLAST of Sed0026811 vs. NCBI nr
Match NameE-valueIdentityDescription
MCH81978.17.9e-1132.18ribonuclease H protein [Trifolium medium][more]
CAB3482375.11.8e-1033.13unnamed protein product [Digitaria exilis][more]
CAB4273082.12.3e-1032.87unnamed protein product [Prunus armeniaca][more]
EEE64789.16.7e-1033.82hypothetical protein OsJ_19645 [Oryza sativa Japonica Group][more]
EEC75749.16.7e-1030.15hypothetical protein OsI_12637 [Oryza sativa Indica Group][more]
BLAST of Sed0026811 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Sed0026811 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A392M5F53.8e-1132.18Ribonuclease H protein (Fragment) OS=Trifolium medium OX=97028 GN=A2U01_0002773 ... [more]
A0A6J5UAY21.1e-1032.87Reverse transcriptase domain-containing protein OS=Prunus armeniaca OX=36596 GN=... [more]
B8AMK53.2e-1030.15RNase H domain-containing protein OS=Oryza sativa subsp. indica OX=39946 GN=OsI_... [more]
B9FIH03.2e-1033.82RNase H domain-containing protein OS=Oryza sativa subsp. japonica OX=39947 GN=Os... [more]
B9FGL89.4e-1030.88Uncharacterized protein OS=Oryza sativa subsp. japonica OX=39947 GN=OsJ_16976 PE... [more]
BLAST of Sed0026811 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G29090.11.5e-0725.81Ribonuclease H-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 92..224
e-value: 1.9E-8
score: 36.3
IPR002156Ribonuclease H domainPFAMPF13456RVT_3coord: 95..219
e-value: 1.0E-16
score: 60.9
NoneNo IPR availablePANTHERPTHR33033POLYNUCLEOTIDYL TRANSFERASE, RIBONUCLEASE H-LIKE SUPERFAMILY PROTEIN-RELATEDcoord: 81..220
NoneNo IPR availablePANTHERPTHR33033:SF67SUBFAMILY NOT NAMEDcoord: 81..220
IPR044730Ribonuclease H-like domain, plant typeCDDcd06222RNase_H_likecoord: 94..218
e-value: 3.83059E-22
score: 85.8288
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 91..221

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0026811.1Sed0026811.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0004523 RNA-DNA hybrid ribonuclease activity