Sed0026517 (gene) Chayote v1

Overview


Name	Sed0026517
Type	gene
Organism	Sechium edule (Chayote v1)
Description	proline-rich receptor-like protein kinase PERK10
Location	LG01: 7493566 .. 7494870 (-)
RNA-Seq Expression	Sed0026517
Synteny	Sed0026517

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATAACTTTAAAATCACTCCTTTTGGAAAATTCCAACGCCGGCTCTCCCGGTGGCTCCGCCGCTCCGCCGCCGCTTGCGCTACCCACGTGGCTCAATCTCAGCCGTCTGTCCGTTTTCCGTGCTCGTGAATCTAGGCTTTCCGCTTTTTTCTCATCCCGATACCAGTTCTTGAAAACCAGATCTGCTTCCAATCCACTCTCTTCTAAATCCCCGCTTTCTTTTCCTTTTCATTTGTTGAGATCGTGTTCTTCATCAGCATTCTTCTGGATTTCAGTGGCGGTGCATTTTCTCCTGGAAGATTCTGTCAAGAAATGGCCAAGTTCGCATCGATTTGTTGTGCAGTTCTTTCGGCTCTGCTTTTGGTGCAAATCACCGTTTCTGCGGATTCGCCGGCCGATTCCCCCGCTCCGCCGCCGCATACCGGCGCGGATTCACCTCCGCCGCGCTCTCCTTCTTCCATTTCCAGTCCACCGTCTACACCGCCTCGGAATGCGCCGGTAAGTTCTCCTCCATCGCCTCCACCATCAAATCTCGCTCCTGGTTCACCTCCGACTCGATCTCGGGCTTCTTCTCCACCGCCATCGGAGCCTAGAGACTTCAATCGGAGCAATGTAACTGGAGGAGACGAATCGGATGGAGAATCGAAGAACGGGATGAGTGGAGCTCAGAAATTCGGAATCGCAATCGGAGTGATTGCGGCGGTTGCTTTGGCTGGATTCGGAGGATTGGTTTACAAGAAGCGCCGAGACAATATTCGCAGATCTGGCTATGGATACACAGCGAGAAGAGAGATTCTCTGAACACCGCCATGGCTCTGGTACCTCTCGATTTCTTAATGTAATTTGGTTTTGGTATACATCTGTTTAGGGATTCATCCACAGTTCTAACTCTCGATTTGATATTCTTTTTGCTCCATTACAATTCCATTGTTCGTCACTGATGTGCTTGAATTCACTGTTCTATTTCAATGTTTTCGAATTCAGATTTCATATTCTGCTTCCTTGTTTGATTTCCTCATCTTCTCCTGAGGATTCGATTTCTGTTGAAGGTTTTGGAACAGAAATTTGCTGAGAGTTCATCATATTACCAGCCACAACTAGATTTTTCTCCATAATTATTCGAATTCTCTGTGAAATTATTGTTTCTCTTCAGTTAATTTCACAAATCACTATCATAGTTATGTCATTGTCATCTTCAATCCCTTACCATTTATAATGTTGATTACATATTTGTATACTCACATGAGGATTAATCTGAATTTGTCTCTCTCTCTTTTTTCCTTAAATATTACTATCAGAACAAGAT

mRNA sequence

ATAACTTTAAAATCACTCCTTTTGGAAAATTCCAACGCCGGCTCTCCCGGTGGCTCCGCCGCTCCGCCGCCGCTTGCGCTACCCACGTGGCTCAATCTCAGCCGTCTGTCCGTTTTCCGTGCTCGTGAATCTAGGCTTTCCGCTTTTTTCTCATCCCGATACCAGTTCTTGAAAACCAGATCTGCTTCCAATCCACTCTCTTCTAAATCCCCGCTTTCTTTTCCTTTTCATTTGTTGAGATCGTGTTCTTCATCAGCATTCTTCTGGATTTCAGTGGCGGTGCATTTTCTCCTGGAAGATTCTGTCAAGAAATGGCCAAGTTCGCATCGATTTGTTGTGCAGTTCTTTCGGCTCTGCTTTTGGTGCAAATCACCGTTTCTGCGGATTCGCCGGCCGATTCCCCCGCTCCGCCGCCGCATACCGGCGCGGATTCACCTCCGCCGCGCTCTCCTTCTTCCATTTCCAGTCCACCGTCTACACCGCCTCGGAATGCGCCGGTAAGTTCTCCTCCATCGCCTCCACCATCAAATCTCGCTCCTGGTTCACCTCCGACTCGATCTCGGGCTTCTTCTCCACCGCCATCGGAGCCTAGAGACTTCAATCGGAGCAATGTAACTGGAGGAGACGAATCGGATGGAGAATCGAAGAACGGGATGAGTGGAGCTCAGAAATTCGGAATCGCAATCGGAGTGATTGCGGCGGTTGCTTTGGCTGGATTCGGAGGATTGGTTTACAAGAAGCGCCGAGACAATATTCGCAGATCTGGCTATGGATACACAGCGAGAAGAGAGATTCTCTGAACACCGCCATGGCTCTGATTTCATATTCTGCTTCCTTGTTTGATTTCCTCATCTTCTCCTGAGGATTCGATTTCTGTTGAAGGTTTTGGAACAGAAATTTGCTGAGAGTTCATCATATTACCAGCCACAACTAGATTTTTCTCCATAATTATTCGAATTCTCTGTGAAATTATTGTTTCTCTTCAGTTAATTTCACAAATCACTATCATAGTTATGTCATTGTCATCTTCAATCCCTTACCATTTATAATGTTGATTACATATTTGTATACTCACATGAGGATTAATCTGAATTTGTCTCTCTCTCTTTTTTCCTTAAATATTACTATCAGAACAAGAT

Coding sequence (CDS)

ATGGCCAAGTTCGCATCGATTTGTTGTGCAGTTCTTTCGGCTCTGCTTTTGGTGCAAATCACCGTTTCTGCGGATTCGCCGGCCGATTCCCCCGCTCCGCCGCCGCATACCGGCGCGGATTCACCTCCGCCGCGCTCTCCTTCTTCCATTTCCAGTCCACCGTCTACACCGCCTCGGAATGCGCCGGTAAGTTCTCCTCCATCGCCTCCACCATCAAATCTCGCTCCTGGTTCACCTCCGACTCGATCTCGGGCTTCTTCTCCACCGCCATCGGAGCCTAGAGACTTCAATCGGAGCAATGTAACTGGAGGAGACGAATCGGATGGAGAATCGAAGAACGGGATGAGTGGAGCTCAGAAATTCGGAATCGCAATCGGAGTGATTGCGGCGGTTGCTTTGGCTGGATTCGGAGGATTGGTTTACAAGAAGCGCCGAGACAATATTCGCAGATCTGGCTATGGATACACAGCGAGAAGAGAGATTCTCTGA

Protein sequence

MAKFASICCAVLSALLLVQITVSADSPADSPAPPPHTGADSPPPRSPSSISSPPSTPPRNAPVSSPPSPPPSNLAPGSPPTRSRASSPPPSEPRDFNRSNVTGGDESDGESKNGMSGAQKFGIAIGVIAAVALAGFGGLVYKKRRDNIRRSGYGYTARREIL

Homology

[Close]

BLAST of Sed0026517 vs. NCBI nr
Match: XP_022159010.1 (classical arabinogalactan protein 9-like [Momordica charantia])

HSP 1 Score: 224.6 bits (571), Expect = 6.3e-55
Identity = 131/170 (77.06%), Postives = 142/170 (83.53%), Query Frame = 0


Query: 1   MAKFASICCAVLSALLLVQITVSADSPADSPAPPPHTGADSPPPRSPSSISSPPSTPPRN 60
           MA FASICC VLS LLLVQ +VS DSPA+SPAPPP TGADSPPPRSPSSISSPP   PRN
Sbjct: 1   MANFASICCVVLSVLLLVQFSVSVDSPAESPAPPPQTGADSPPPRSPSSISSPPDASPRN 60

Query: 61  APVSSPPSPPPSNLAPGSPPT--------RSRASSPPPSEPRDFNRSNVTGGDESDGESK 120
           AP+SSPPS PPS+LAPGSPP+         S A SPPPSE  D +RSNV+ GDES+GESK
Sbjct: 61  APISSPPSHPPSDLAPGSPPSPLPSSPPPSSPAPSPPPSESADVSRSNVSKGDESEGESK 120

Query: 121 NGMSGAQKFGIAIGVIAAVALAGFGGLVYKKRRDNIRRSGYGYTARREIL 163
           +GMSGAQKFG+A+GVI AV LAGFGGLVYKKRRDNIRRSGYGY ARREIL
Sbjct: 121 DGMSGAQKFGVAVGVIGAVVLAGFGGLVYKKRRDNIRRSGYGYAARREIL 170

[Close]

BLAST of Sed0026517 vs. NCBI nr
Match: XP_023523185.1 (lysine-rich arabinogalactan protein 19-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 220.3 bits (560), Expect = 1.2e-53
Identity = 133/168 (79.17%), Postives = 141/168 (83.93%), Query Frame = 0


Query: 1   MAKFASICCAVLSALLLVQITVSADSPADSPAPPPHTGADSPPPRSPSSISSPPSTPPRN 60
           MAKFASICCAVLSALLL Q TVS+DS A+SPAPPP TGADSP  RSP SISSPP   PRN
Sbjct: 1   MAKFASICCAVLSALLLAQFTVSSDSMAESPAPPPQTGADSPSSRSP-SISSPPDASPRN 60

Query: 61  APVSSPPSPPPSNLAPGSPPTR------SRASSPPPSEPRDFNRSNVTGGDESDGESKNG 120
           APVSSPPSPPPS+L PGS PTR      S A SPPPSEP DFNRSNV+  DESDGESK+G
Sbjct: 61  APVSSPPSPPPSDLTPGSSPTRSPPPSSSLAPSPPPSEPSDFNRSNVSKEDESDGESKDG 120

Query: 121 MSGAQKFGIAIGVIAAVALAGFGGLVYKKRRDNIRRSGYGYTARREIL 163
           MSGAQKFGIA+GVIAA  L GFGGL+YKKR+ NIRRSGYGYTARREIL
Sbjct: 121 MSGAQKFGIAVGVIAAAGLVGFGGLIYKKRQANIRRSGYGYTARREIL 167

[Close]

BLAST of Sed0026517 vs. NCBI nr
Match: XP_022998944.1 (proline-rich receptor-like protein kinase PERK10 [Cucurbita maxima])

HSP 1 Score: 217.6 bits (553), Expect = 7.8e-53
Identity = 133/168 (79.17%), Postives = 141/168 (83.93%), Query Frame = 0


Query: 1   MAKFASICCAVLSALLLVQITVSADSPADSPAPPPHTGADSPPPRSPSSISSPPSTPPRN 60
           MAKFASICCAVLSALLL Q TVS+DS A+SPAPPP TGADSP  RSP SISSP    PRN
Sbjct: 1   MAKFASICCAVLSALLLAQFTVSSDSMAESPAPPPQTGADSPSSRSP-SISSPSYASPRN 60

Query: 61  APVSSPPSPPPSNLAPGSPPTR------SRASSPPPSEPRDFNRSNVTGGDESDGESKNG 120
           APVSSPPSPPPS+LAPGS PTR      S A SPPPSEP DFNRSNV+  DESDGESK+G
Sbjct: 61  APVSSPPSPPPSDLAPGSSPTRSPPPSSSLAFSPPPSEPSDFNRSNVSKEDESDGESKDG 120

Query: 121 MSGAQKFGIAIGVIAAVALAGFGGLVYKKRRDNIRRSGYGYTARREIL 163
           MSGAQKFGIA+GVIAA  L GFGGL+YKKR+ NIRRSGYGYTARREIL
Sbjct: 121 MSGAQKFGIAVGVIAAAGLVGFGGLIYKKRQANIRRSGYGYTARREIL 167

[Close]

BLAST of Sed0026517 vs. NCBI nr
Match: KAG7019236.1 (hypothetical protein SDJN02_18195, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 215.7 bits (548), Expect = 2.9e-52
Identity = 128/168 (76.19%), Postives = 139/168 (82.74%), Query Frame = 0


Query: 1   MAKFASICCAVLSALLLVQITVSADSPADSPAPPPHTGADSPPPRSPSSISSPPSTPPRN 60
           MAK  SICCAVLS LLL Q +VS DSPA+SPAPPP TGADSPPPRSPS ISSPP+  PRN
Sbjct: 1   MAKVTSICCAVLSVLLLAQFSVSVDSPAESPAPPPQTGADSPPPRSPSRISSPPAPSPRN 60

Query: 61  APVSSPPSPPPSNLAPGS------PPTRSRASSPPPSEPRDFNRSNVTGGDESDGESKNG 120
           APVSSPP+PPPS+L PGS      PP  S + SPPPSE  D +R+NV+  DESD ESKNG
Sbjct: 61  APVSSPPAPPPSDLPPGSSPTPPPPPPPSSSPSPPPSEASDISRNNVSKNDESDEESKNG 120

Query: 121 MSGAQKFGIAIGVIAAVALAGFGGLVYKKRRDNIRRSGYGYTARREIL 163
           MSGAQKFGIAIGVIAAVAL GFGGLVYKKR+DNIRRS YGYTARRE+L
Sbjct: 121 MSGAQKFGIAIGVIAAVALIGFGGLVYKKRQDNIRRSRYGYTARRELL 168

[Close]

BLAST of Sed0026517 vs. NCBI nr
Match: XP_022970448.1 (lysine-rich arabinogalactan protein 19-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 215.3 bits (547), Expect = 3.9e-52
Identity = 128/166 (77.11%), Postives = 139/166 (83.73%), Query Frame = 0


Query: 1   MAKFASICCAVLSALLLVQITVSADSPADSPAPPPHTGADSPPPRSPSSISSPPSTPPRN 60
           MAK  SICCAVLS LLL Q +VS DSPA+SPAPPP TGADSPPPRSPS ISSPP+  PRN
Sbjct: 1   MAKVTSICCAVLSVLLLAQFSVSVDSPAESPAPPPQTGADSPPPRSPSRISSPPAPSPRN 60

Query: 61  APVSSPPSPPPSNLAPGS----PPTRSRASSPPPSEPRDFNRSNVTGGDESDGESKNGMS 120
           APVSSPP+PPPS+LAPGS    PP  S + SP PSE  D +R+NV+  DESD ESKNGMS
Sbjct: 61  APVSSPPAPPPSDLAPGSSPTPPPPPSSSPSPSPSEASDISRNNVSKNDESDEESKNGMS 120

Query: 121 GAQKFGIAIGVIAAVALAGFGGLVYKKRRDNIRRSGYGYTARREIL 163
           GAQKFGIAIGVIAAVAL GFGGLVYKKR+DNIRRS YGYTARRE+L
Sbjct: 121 GAQKFGIAIGVIAAVALIGFGGLVYKKRQDNIRRSRYGYTARRELL 166

[Close]

BLAST of Sed0026517 vs. ExPASy TrEMBL
Match: A0A6J1DXF9 (classical arabinogalactan protein 9-like OS=Momordica charantia OX=3673 GN=LOC111025456 PE=4 SV=1)

HSP 1 Score: 224.6 bits (571), Expect = 3.1e-55
Identity = 131/170 (77.06%), Postives = 142/170 (83.53%), Query Frame = 0


Query: 1   MAKFASICCAVLSALLLVQITVSADSPADSPAPPPHTGADSPPPRSPSSISSPPSTPPRN 60
           MA FASICC VLS LLLVQ +VS DSPA+SPAPPP TGADSPPPRSPSSISSPP   PRN
Sbjct: 1   MANFASICCVVLSVLLLVQFSVSVDSPAESPAPPPQTGADSPPPRSPSSISSPPDASPRN 60

Query: 61  APVSSPPSPPPSNLAPGSPPT--------RSRASSPPPSEPRDFNRSNVTGGDESDGESK 120
           AP+SSPPS PPS+LAPGSPP+         S A SPPPSE  D +RSNV+ GDES+GESK
Sbjct: 61  APISSPPSHPPSDLAPGSPPSPLPSSPPPSSPAPSPPPSESADVSRSNVSKGDESEGESK 120

Query: 121 NGMSGAQKFGIAIGVIAAVALAGFGGLVYKKRRDNIRRSGYGYTARREIL 163
           +GMSGAQKFG+A+GVI AV LAGFGGLVYKKRRDNIRRSGYGY ARREIL
Sbjct: 121 DGMSGAQKFGVAVGVIGAVVLAGFGGLVYKKRRDNIRRSGYGYAARREIL 170

[Close]

BLAST of Sed0026517 vs. ExPASy TrEMBL
Match: A0A6J1KFQ8 (proline-rich receptor-like protein kinase PERK10 OS=Cucurbita maxima OX=3661 GN=LOC111493451 PE=4 SV=1)

HSP 1 Score: 217.6 bits (553), Expect = 3.8e-53
Identity = 133/168 (79.17%), Postives = 141/168 (83.93%), Query Frame = 0


Query: 1   MAKFASICCAVLSALLLVQITVSADSPADSPAPPPHTGADSPPPRSPSSISSPPSTPPRN 60
           MAKFASICCAVLSALLL Q TVS+DS A+SPAPPP TGADSP  RSP SISSP    PRN
Sbjct: 1   MAKFASICCAVLSALLLAQFTVSSDSMAESPAPPPQTGADSPSSRSP-SISSPSYASPRN 60

Query: 61  APVSSPPSPPPSNLAPGSPPTR------SRASSPPPSEPRDFNRSNVTGGDESDGESKNG 120
           APVSSPPSPPPS+LAPGS PTR      S A SPPPSEP DFNRSNV+  DESDGESK+G
Sbjct: 61  APVSSPPSPPPSDLAPGSSPTRSPPPSSSLAFSPPPSEPSDFNRSNVSKEDESDGESKDG 120

Query: 121 MSGAQKFGIAIGVIAAVALAGFGGLVYKKRRDNIRRSGYGYTARREIL 163
           MSGAQKFGIA+GVIAA  L GFGGL+YKKR+ NIRRSGYGYTARREIL
Sbjct: 121 MSGAQKFGIAVGVIAAAGLVGFGGLIYKKRQANIRRSGYGYTARREIL 167

[Close]

BLAST of Sed0026517 vs. ExPASy TrEMBL
Match: A0A6J1I3V8 (lysine-rich arabinogalactan protein 19-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111469424 PE=4 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 1.9e-52
Identity = 128/166 (77.11%), Postives = 139/166 (83.73%), Query Frame = 0


Query: 1   MAKFASICCAVLSALLLVQITVSADSPADSPAPPPHTGADSPPPRSPSSISSPPSTPPRN 60
           MAK  SICCAVLS LLL Q +VS DSPA+SPAPPP TGADSPPPRSPS ISSPP+  PRN
Sbjct: 1   MAKVTSICCAVLSVLLLAQFSVSVDSPAESPAPPPQTGADSPPPRSPSRISSPPAPSPRN 60

Query: 61  APVSSPPSPPPSNLAPGS----PPTRSRASSPPPSEPRDFNRSNVTGGDESDGESKNGMS 120
           APVSSPP+PPPS+LAPGS    PP  S + SP PSE  D +R+NV+  DESD ESKNGMS
Sbjct: 61  APVSSPPAPPPSDLAPGSSPTPPPPPSSSPSPSPSEASDISRNNVSKNDESDEESKNGMS 120

Query: 121 GAQKFGIAIGVIAAVALAGFGGLVYKKRRDNIRRSGYGYTARREIL 163
           GAQKFGIAIGVIAAVAL GFGGLVYKKR+DNIRRS YGYTARRE+L
Sbjct: 121 GAQKFGIAIGVIAAVALIGFGGLVYKKRQDNIRRSRYGYTARRELL 166

[Close]

BLAST of Sed0026517 vs. ExPASy TrEMBL
Match: A0A6J1G9L4 (proline-rich receptor-like protein kinase PERK10 OS=Cucurbita moschata OX=3662 GN=LOC111452046 PE=4 SV=1)

HSP 1 Score: 214.5 bits (545), Expect = 3.2e-52
Identity = 132/168 (78.57%), Postives = 140/168 (83.33%), Query Frame = 0


Query: 1   MAKFASICCAVLSALLLVQITVSADSPADSPAPPPHTGADSPPPRSPSSISSPPSTPPRN 60
           MAKFASICCAVLSALLL Q TVS+DS A+SPAPPP TGADSP  RSP SISSPP   PRN
Sbjct: 1   MAKFASICCAVLSALLLAQFTVSSDSIAESPAPPPQTGADSPSSRSP-SISSPPDASPRN 60

Query: 61  APVSSPPSPPPSNLAPGSPPTR------SRASSPPPSEPRDFNRSNVTGGDESDGESKNG 120
           APVSS PSP PS+LAPGS PTR      S A SPPPSEP DFNRSNV+  DESDGESK+G
Sbjct: 61  APVSSAPSPLPSDLAPGSSPTRSLPPSSSLAPSPPPSEPSDFNRSNVSKEDESDGESKDG 120

Query: 121 MSGAQKFGIAIGVIAAVALAGFGGLVYKKRRDNIRRSGYGYTARREIL 163
           MSGAQKFGIA+GVIAA  L GFGGL+YKKR+ NIRRSGYGYTARREIL
Sbjct: 121 MSGAQKFGIAVGVIAAAGLVGFGGLIYKKRQANIRRSGYGYTARREIL 167

[Close]

BLAST of Sed0026517 vs. ExPASy TrEMBL
Match: A0A5D3DCM4 (Classical arabinogalactan protein 9 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold359G00590 PE=4 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 7.1e-52
Identity = 127/169 (75.15%), Postives = 141/169 (83.43%), Query Frame = 0


Query: 1   MAKFASICCAVLSALLLVQITVSADSPADSPAPPPHTGADSPPPRSPSSISSPPSTPPRN 60
           MAK AS CCAVLS LLL+Q++VSADSPA+SPAPPP TG DSPPPR+PSSISSPP   PRN
Sbjct: 1   MAKVASFCCAVLSVLLLMQVSVSADSPAESPAPPPQTGVDSPPPRAPSSISSPPDASPRN 60

Query: 61  APVSSPPSPPPSNLAPGS-------PPTRSRASSPPPSEPRDFNRSNVTGGDESDGESKN 120
           APVSSPPSPPPS+LAP S       PP+ S A SPPPSE  D +R+NV   +ESD ESK+
Sbjct: 61  APVSSPPSPPPSDLAPDSSPTSPPPPPSSSPAPSPPPSEASDVSRNNVISENESDEESKD 120

Query: 121 GMSGAQKFGIAIGVIAAVALAGFGGLVYKKRRDNIRRSGYGYTARREIL 163
           GMSGA+KFGIAIGVIAAVAL GFGG+VYKKR+DNIRRS YGYTARREIL
Sbjct: 121 GMSGAKKFGIAIGVIAAVALIGFGGMVYKKRQDNIRRSHYGYTARREIL 169

[Close]

BLAST of Sed0026517 vs. TAIR 10
Match: AT3G45230.1 (hydroxyproline-rich glycoprotein family protein )

HSP 1 Score: 73.6 bits (179), Expect = 1.7e-13
Identity = 75/175 (42.86%), Postives = 99/175 (56.57%), Query Frame = 0


Query: 3   KFASICCAVLSALLLVQ---ITVSADSP----ADSP----APPPHTGADSPPPRSPSSIS 62
           K   I  A++ +L+LV    +T S+ +P    ADSP    +PP   G+ + P  SP   S
Sbjct: 2   KLEFIIVAMMLSLVLVSGEILTKSSPAPSPDLADSPLIHASPPSKLGSHNSPAESPIEYS 61

Query: 63  SPPSTPPRNAPVSSPP-SPPPSNLAPGSPPTRSRASSPPPS-EPRDFNRSNVTG--GDES 122
           SPP     ++P  SP  SP  S   P    + S ++SP PS E  D N S++TG  G++ 
Sbjct: 62  SPPEPETEHSPSPSPANSPSVSPPLPNDSQSPSSSASPSPSPEASDVNHSDITGIEGEKL 121

Query: 123 DGESKNGMSGAQKFGIAIGVIAAVALAGFGGLVYKKRRDNIRRSGYGYTARREIL 163
              S  GMSG +K G+A G IAAV + G  G VYKKR++NIRRS YGY A REIL
Sbjct: 122 PSGSGGGMSGGKKVGVAFGAIAAVCVVGVAGFVYKKRQENIRRSRYGYAA-REIL 175

[Close]

BLAST of Sed0026517 vs. TAIR 10
Match: AT2G28440.1 (proline-rich family protein )

HSP 1 Score: 52.0 bits (123), Expect = 5.3e-07
Identity = 62/161 (38.51%), Postives = 77/161 (47.83%), Query Frame = 0


Query: 23  SADSPADSPAPP--------PHTGADSPPPRSPSSISSPPSTPPRNAPVSSPPSPPPSNL 82
           S+   ADSP PP        P + A SP P S +   SPP  PP+    SSP  P P+ +
Sbjct: 108 SSSPEADSPLPPSSSPEANSPQSPASSPKPESLADSPSPPPPPPQPESPSSPSYPEPAPV 167

Query: 83  -APG--------SPPTR---SRASSPPPSEPRDFNRSNVTGGDESDGESKN-GMSGAQKF 142
            AP          P T    S A SP     +D   S+  G + +D   ++ GMSG +K 
Sbjct: 168 PAPSDDDSDDDPEPETEYFPSPAPSPELGMAQDIKASDAAGEELNDERGEDYGMSGLEKA 227

Query: 143 GIAIGVIAAVALAGFGGLVYKKRRDNIRRSGYGYTARREIL 163
           GIAIG I  V     G LVYKKRRDN+ R+ Y Y    E L
Sbjct: 228 GIAIGTILGVGAIVIGALVYKKRRDNMTRARYTYFTEGEFL 268

[Close]

BLAST of Sed0026517 vs. TAIR 10
Match: AT5G60630.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 6 growth stages; BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT3G45230.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 45.8 bits (107), Expect = 3.8e-05
Identity = 46/115 (40.00%), Postives = 61/115 (53.04%), Query Frame = 0


Query: 50  ISSPPSTPPRNAPVSSPPSPPPSNLAPGSPPTRSR----ASSPPPSEPRDFNRSNVT--G 109
           +S   ST   +  +    S P S       PT S      SS   +E  D N ++ T  G
Sbjct: 21  VSGEISTEEISPAIEHSSSLPQSETEMSPSPTMSNDYDYPSSSQLTESNDLNYTDSTRPG 80

Query: 110 GDESDGESKNGMSGAQKFGIA-IGVIAAVALAGFGGLVYKKRRDNIRRSGYGYTA 158
           G+E+    +NG  G +K GIA +G IAA ++ GFGG V KKRR+NIRRS YGY +
Sbjct: 81  GEEASVGGENGGGGGKKTGIAVVGSIAAASMVGFGGYVLKKRRENIRRSRYGYAS 135

The following BLAST results are available for this feature:

BLAST of Sed0026517 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022159010.1	6.3e-55	77.06	classical arabinogalactan protein 9-like [Momordica charantia]	[more]
XP_023523185.1	1.2e-53	79.17	lysine-rich arabinogalactan protein 19-like [Cucurbita pepo subsp. pepo]	[more]
XP_022998944.1	7.8e-53	79.17	proline-rich receptor-like protein kinase PERK10 [Cucurbita maxima]	[more]
KAG7019236.1	2.9e-52	76.19	hypothetical protein SDJN02_18195, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022970448.1	3.9e-52	77.11	lysine-rich arabinogalactan protein 19-like isoform X1 [Cucurbita maxima]	[more]

BLAST of Sed0026517 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0026517 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DXF9	3.1e-55	77.06	classical arabinogalactan protein 9-like OS=Momordica charantia OX=3673 GN=LOC11...	[more]
A0A6J1KFQ8	3.8e-53	79.17	proline-rich receptor-like protein kinase PERK10 OS=Cucurbita maxima OX=3661 GN=...	[more]
A0A6J1I3V8	1.9e-52	77.11	lysine-rich arabinogalactan protein 19-like isoform X1 OS=Cucurbita maxima OX=36...	[more]
A0A6J1G9L4	3.2e-52	78.57	proline-rich receptor-like protein kinase PERK10 OS=Cucurbita moschata OX=3662 G...	[more]
A0A5D3DCM4	7.1e-52	75.15	Classical arabinogalactan protein 9 OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]

BLAST of Sed0026517 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G45230.1	1.7e-13	42.86	hydroxyproline-rich glycoprotein family protein	[more]
AT2G28440.1	5.3e-07	38.51	proline-rich family protein	[more]
AT5G60630.1	3.8e-05	40.00	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 25..114
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 28..87
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 88..114
None	No IPR available	PANTHER	PTHR36721	PROLINE-RICH FAMILY PROTEIN	coord: 1..162
None	No IPR available	PANTHER	PTHR36721:SF5	PROTEIN, PUTATIVE-RELATED	coord: 1..162

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0026517.1	Sed0026517.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016310	phosphorylation
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0016301	kinase activity