Sed0026426 (gene) Chayote v1

Overview


Name	Sed0026426
Type	gene
Organism	Sechium edule (Chayote v1)
Description	60S ribosomal protein L31
Location	LG08: 6924137 .. 6925754 (-)
RNA-Seq Expression	Sed0026426
Synteny	Sed0026426

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCTTATTGTACCCTCGTCTTCAATTTACGCCTCCTGCGCTTGAAACCCTAGAGCAAGGTTTCTCTGGATCCGCCATTTTTAGGTCTTCTAAACTTCCAATTTCTTTGTATATTGCCTCTTTCATTGTTCGTTTTTCTTTTACACTTCCTCGATATTGTTTGTTTATCGGTTTGATGATTTCGTTTGAACTTGTTGCAGGTGTAGTTGAAGAAGCCGAACTGCAATTATGGTTGAGAAAACCAAGGGAAGGAAGGAAGAGGTGGTCGCCAGAGAGTACACCATCAATCTTCACAAGCGTCTTCACGGCTGGTATCGATTCATTCTTCCTTTTCCTTTTCTTTCTTGCGTTTTTTGTAATTCGATATAACTGTTTTCATTTGCCAATTTGATTTGCAATTGATATTCCTTTAATATCTTTGGCGAGAGATTTTCAGTTGCTTATGTTTTGTTCATGTTTCGAATTATGAACTAAGAATTTGGAAACTGAAGTGGTAGGGTCAAATTGGAGCTCCTTTTTTTGTGGCCTCTCCTCGTTGTTTTGTAAGCTCCTTGGCCTCATTAAACCTTTCATTCAGTTTAGGAAAATCTATAGGATAAGAGCTTACGAATGCACTGATTGTAAATTGACCATGGAAGGCATTGGTGATACTGAAGGGGGTTAAGTAAAGTAATAATGGACAACTTTTGCATTGTATTTGATTCAAGTTCAATAGAAAACTGAGGAATATTGATACTAGTTAGTTAGCGACAAGAGCAAAATAGCTTAGCGGAATTACTGAGGTCATGGTTTTGAATCTTCCAAGTCCCAATCTCTGGTTTTTATTGAACTCATTTAAAGTTTCACTTCTTTGCGAGAGGAAGAAGAAATATTAGAGGCCTGTACATATAGTGAAACATTGGACAAGAGGATTGGTGGATAACTTTATCATTTATGTGCCGTTCTCTTTCTCGATTTCATGGTTAATTTCTAGTATGGCAGTTTTGTGTTTGTATTTTTTTTTTCCTTCGTTGTATCGGTAGTTTTTAGCATTCAAATTCGTTTCTTTGTTTATGTAACTGTAACAACTCTAGTAATTCTCATGCTTTACTTGAATTTTAAACGACAGCACCTTCAAGAAGAAGGCTCCCAAGGCCATCAAGGAGATAAGGAAGTTTGCAGAGAAAGCAATGGGAACAAAGGATGTCAGAGTGGACGTGAAACTGAACAAGCAAATCTGGAGCAGAGGAATCCGTGGTGTTCCAAGGAGAATTAGAGTTCGTATTGCTCGCAAGAGGAACGACGACGAAGATGCGAAGGAAGAACTGTATTCTCTTGTAACCGTTGCCGAAATCCCAGCAGAAGGTTTGAAAGGATTAGGGACAAAGGTCATCGATGAAGAAGATTGATCTCTCATACCCATTTGCCTTATTTATCTGGTATTTCCAACTTTTGCCAAAATTTTTGATACAAGACTTCTTTGAGTCCGAAGTTTATTGTCCTCCGTTTCTTGCACTTTATTTTGACTTTGAATACTAGTGGAAACAGTTCTTTTAGATATATTGTTGGTGTTTGCATTGTGTTTTAACATTATAGTTTCTCTGTGTTGCTCTTTTTTAGTTATATTGTTCTACTTTCCA

mRNA sequence

TTCTTATTGTACCCTCGTCTTCAATTTACGCCTCCTGCGCTTGAAACCCTAGAGCAAGGTTTCTCTGGATCCGCCATTTTTAGGTGTAGTTGAAGAAGCCGAACTGCAATTATGGTTGAGAAAACCAAGGGAAGGAAGGAAGAGGTGGTCGCCAGAGAGTACACCATCAATCTTCACAAGCGTCTTCACGGCTGCACCTTCAAGAAGAAGGCTCCCAAGGCCATCAAGGAGATAAGGAAGTTTGCAGAGAAAGCAATGGGAACAAAGGATGTCAGAGTGGACGTGAAACTGAACAAGCAAATCTGGAGCAGAGGAATCCGTGGTGTTCCAAGGAGAATTAGAGTTCGTATTGCTCGCAAGAGGAACGACGACGAAGATGCGAAGGAAGAACTGTATTCTCTTGTAACCGTTGCCGAAATCCCAGCAGAAGGTTTGAAAGGATTAGGGACAAAGGTCATCGATGAAGAAGATTGATCTCTCATACCCATTTGCCTTATTTATCTGGTATTTCCAACTTTTGCCAAAATTTTTGATACAAGACTTCTTTGAGTCCGAAGTTTATTGTCCTCCGTTTCTTGCACTTTATTTTGACTTTGAATACTAGTGGAAACAGTTCTTTTAGATATATTGTTGGTGTTTGCATTGTGTTTTAACATTATAGTTTCTCTGTGTTGCTCTTTTTTAGTTATATTGTTCTACTTTCCA

Coding sequence (CDS)

ATGGTTGAGAAAACCAAGGGAAGGAAGGAAGAGGTGGTCGCCAGAGAGTACACCATCAATCTTCACAAGCGTCTTCACGGCTGCACCTTCAAGAAGAAGGCTCCCAAGGCCATCAAGGAGATAAGGAAGTTTGCAGAGAAAGCAATGGGAACAAAGGATGTCAGAGTGGACGTGAAACTGAACAAGCAAATCTGGAGCAGAGGAATCCGTGGTGTTCCAAGGAGAATTAGAGTTCGTATTGCTCGCAAGAGGAACGACGACGAAGATGCGAAGGAAGAACTGTATTCTCTTGTAACCGTTGCCGAAATCCCAGCAGAAGGTTTGAAAGGATTAGGGACAAAGGTCATCGATGAAGAAGATTGA

Protein sequence

MVEKTKGRKEEVVAREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKQIWSRGIRGVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDEED

Homology

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BLAST of Sed0026426 vs. NCBI nr
Match: XP_008450816.1 (PREDICTED: 60S ribosomal protein L31 [Cucumis melo] >XP_022928007.1 60S ribosomal protein L31 [Cucurbita moschata] >XP_022928011.1 60S ribosomal protein L31 [Cucurbita moschata] >XP_022928015.1 60S ribosomal protein L31 [Cucurbita moschata] >XP_022960857.1 60S ribosomal protein L31 [Cucurbita moschata] >XP_023516766.1 60S ribosomal protein L31 [Cucurbita pepo subsp. pepo] >XP_023516767.1 60S ribosomal protein L31 [Cucurbita pepo subsp. pepo] >KAG6588019.1 60S ribosomal protein L31, partial [Cucurbita argyrosperma subsp. sororia] >KAG7021916.1 60S ribosomal protein L31 [Cucurbita argyrosperma subsp. argyrosperma] >TYK10122.1 60S ribosomal protein L31 [Cucumis melo var. makuwa] >KAG7023639.1 60S ribosomal protein L31, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 229.2 bits (583), Expect = 1.9e-56
Identity = 117/120 (97.50%), Postives = 118/120 (98.33%), Query Frame = 0


Query: 1   MVEKTKGRKEEVVAREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKL 60
           MVEKTKGRKEEVV+REYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKL
Sbjct: 1   MVEKTKGRKEEVVSREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKL 60

Query: 61  NKQIWSRGIRGVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDEED 120
           NK IWSRGIR VPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDEED
Sbjct: 61  NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDEED 120

[Close]

BLAST of Sed0026426 vs. NCBI nr
Match: KAG6589975.1 (60S ribosomal protein L31, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 229.2 bits (583), Expect = 1.9e-56
Identity = 117/120 (97.50%), Postives = 118/120 (98.33%), Query Frame = 0


Query: 1   MVEKTKGRKEEVVAREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKL 60
           MVEKTKGRKEEVV+REYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKL
Sbjct: 94  MVEKTKGRKEEVVSREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKL 153

Query: 61  NKQIWSRGIRGVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDEED 120
           NK IWSRGIR VPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDEED
Sbjct: 154 NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDEED 213

[Close]

BLAST of Sed0026426 vs. NCBI nr
Match: XP_038878471.1 (60S ribosomal protein L31 [Benincasa hispida] >XP_038878472.1 60S ribosomal protein L31 [Benincasa hispida])

HSP 1 Score: 228.8 bits (582), Expect = 2.5e-56
Identity = 117/120 (97.50%), Postives = 117/120 (97.50%), Query Frame = 0


Query: 1   MVEKTKGRKEEVVAREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKL 60
           MVEKTKGRKEEVV REYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKL
Sbjct: 1   MVEKTKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKL 60

Query: 61  NKQIWSRGIRGVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDEED 120
           NK IWSRGIR VPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDEED
Sbjct: 61  NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDEED 120

[Close]

BLAST of Sed0026426 vs. NCBI nr
Match: XP_022987909.1 (60S ribosomal protein L31-like [Cucurbita maxima])

HSP 1 Score: 228.0 bits (580), Expect = 4.3e-56
Identity = 116/120 (96.67%), Postives = 118/120 (98.33%), Query Frame = 0


Query: 1   MVEKTKGRKEEVVAREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKL 60
           MVEKTKGRKEEVV+REYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKL
Sbjct: 1   MVEKTKGRKEEVVSREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKL 60

Query: 61  NKQIWSRGIRGVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDEED 120
           NK IWSRGIR VPRRIRVRIARKRNDDEDAKEELYSLVTV+EIPAEGLKGLGTKVIDEED
Sbjct: 61  NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVSEIPAEGLKGLGTKVIDEED 120

[Close]

BLAST of Sed0026426 vs. NCBI nr
Match: XP_022145069.1 (60S ribosomal protein L31 [Momordica charantia] >XP_022145070.1 60S ribosomal protein L31 [Momordica charantia] >XP_022145071.1 60S ribosomal protein L31 [Momordica charantia])

HSP 1 Score: 227.3 bits (578), Expect = 7.3e-56
Identity = 116/120 (96.67%), Postives = 117/120 (97.50%), Query Frame = 0


Query: 1   MVEKTKGRKEEVVAREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKL 60
           MVEKTKGRKEEVV+REYTINLHKRLHGCTFKKKAP AIKEIRKFAEKAMGTKDVRVDVKL
Sbjct: 1   MVEKTKGRKEEVVSREYTINLHKRLHGCTFKKKAPNAIKEIRKFAEKAMGTKDVRVDVKL 60

Query: 61  NKQIWSRGIRGVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDEED 120
           NK IWSRGIR VPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDEED
Sbjct: 61  NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDEED 120

[Close]

BLAST of Sed0026426 vs. ExPASy Swiss-Prot
Match: P46290 (60S ribosomal protein L31 OS=Nicotiana glutinosa OX=35889 GN=RPL31 PE=2 SV=1)

HSP 1 Score: 216.5 bits (550), Expect = 1.7e-55
Identity = 108/120 (90.00%), Postives = 115/120 (95.83%), Query Frame = 0


Query: 1   MVEKTKGRKEEVVAREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKL 60
           M +KTKGRKEEVV REYTINLHKRLH CTFKKKAP AIKEIRKFA+KAMGTKDVRVDVKL
Sbjct: 1   MSDKTKGRKEEVVTREYTINLHKRLHSCTFKKKAPTAIKEIRKFAQKAMGTKDVRVDVKL 60

Query: 61  NKQIWSRGIRGVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDEED 120
           NKQIWSRGIR VPRR+RVRIARKRNDDEDAKEELYSLVTVAEIPA+GLKGLGTK+I++ED
Sbjct: 61  NKQIWSRGIRSVPRRVRVRIARKRNDDEDAKEELYSLVTVAEIPAKGLKGLGTKIIEDED 120

[Close]

BLAST of Sed0026426 vs. ExPASy Swiss-Prot
Match: Q9MAV7 (60S ribosomal protein L31 OS=Panax ginseng OX=4054 GN=RPL31 PE=2 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 1.9e-54
Identity = 107/120 (89.17%), Postives = 114/120 (95.00%), Query Frame = 0


Query: 1   MVEKTKGRKEEVVAREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKL 60
           MVEKTKGRKEEVV REYTINLHKRLHGCTFKKKAP AIKEIRKFA+KAMGTKDVRVDVKL
Sbjct: 1   MVEKTKGRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTKDVRVDVKL 60

Query: 61  NKQIWSRGIRGVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDEED 120
           NKQIWSRGIR VPRR+RVRIARKRNDDEDAKEELYSLVTVA+IPA  LKGLG ++I+E+D
Sbjct: 61  NKQIWSRGIRSVPRRVRVRIARKRNDDEDAKEELYSLVTVAKIPAGTLKGLGPQIIEEDD 120

[Close]

BLAST of Sed0026426 vs. ExPASy Swiss-Prot
Match: P51420 (60S ribosomal protein L31-3 OS=Arabidopsis thaliana OX=3702 GN=RPL31C PE=3 SV=2)

HSP 1 Score: 209.1 bits (531), Expect = 2.7e-53
Identity = 104/119 (87.39%), Postives = 112/119 (94.12%), Query Frame = 0


Query: 2   VEKTKGRKEEVVAREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLN 61
           + + KGRKEEV+ REYTINLH+RLH CTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLN
Sbjct: 1   MSEKKGRKEEVITREYTINLHRRLHKCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLN 60

Query: 62  KQIWSRGIRGVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDEED 121
           KQIWS+GIRG PRRIRVR+ARKRNDDEDAKEE +SLVTVAEIPAEGL GLGTKVI+EED
Sbjct: 61  KQIWSKGIRGPPRRIRVRVARKRNDDEDAKEEFFSLVTVAEIPAEGLSGLGTKVIEEED 119

[Close]

BLAST of Sed0026426 vs. ExPASy Swiss-Prot
Match: Q9STR1 (60S ribosomal protein L31-2 OS=Arabidopsis thaliana OX=3702 GN=RPL31B PE=3 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 6.0e-53
Identity = 103/119 (86.55%), Postives = 111/119 (93.28%), Query Frame = 0


Query: 2   VEKTKGRKEEVVAREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLN 61
           + + KGRKEEVV REYTINLH+RLH CTFKKKAPKAIKEIRKFAEK MGTKDVRVDVKLN
Sbjct: 1   MSEKKGRKEEVVTREYTINLHRRLHSCTFKKKAPKAIKEIRKFAEKEMGTKDVRVDVKLN 60

Query: 62  KQIWSRGIRGVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDEED 121
           KQIWS+GIRG PRRIRVR+ARKRNDDEDAKEE +SLVTVAEIPAEGL GLGTK+I+EED
Sbjct: 61  KQIWSKGIRGPPRRIRVRVARKRNDDEDAKEEFFSLVTVAEIPAEGLSGLGTKIIEEED 119

[Close]

BLAST of Sed0026426 vs. ExPASy Swiss-Prot
Match: Q9SLL7 (60S ribosomal protein L31-1 OS=Arabidopsis thaliana OX=3702 GN=RPL31A PE=3 SV=1)

HSP 1 Score: 206.8 bits (525), Expect = 1.3e-52
Identity = 104/119 (87.39%), Postives = 111/119 (93.28%), Query Frame = 0


Query: 2   VEKTKGRKEEVVAREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLN 61
           +EK KGRKEEVV REYTINLH+RLH CTFKKKAP AIKEIRKFA KAMGTKDVRVDVKLN
Sbjct: 1   MEKGKGRKEEVVTREYTINLHRRLHSCTFKKKAPNAIKEIRKFALKAMGTKDVRVDVKLN 60

Query: 62  KQIWSRGIRGVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDEED 121
           KQIWS+GIRG PRRIRVR+ARKRNDDEDAKEE +SLVTVAEIPAEGL GLGTKVI+EE+
Sbjct: 61  KQIWSKGIRGPPRRIRVRVARKRNDDEDAKEEFFSLVTVAEIPAEGLSGLGTKVIEEEE 119

[Close]

BLAST of Sed0026426 vs. ExPASy TrEMBL
Match: A0A6J1EIQ4 (60S ribosomal protein L31 OS=Cucurbita moschata OX=3662 GN=LOC111434907 PE=3 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 9.2e-57
Identity = 117/120 (97.50%), Postives = 118/120 (98.33%), Query Frame = 0


Query: 1   MVEKTKGRKEEVVAREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKL 60
           MVEKTKGRKEEVV+REYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKL
Sbjct: 1   MVEKTKGRKEEVVSREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKL 60

Query: 61  NKQIWSRGIRGVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDEED 120
           NK IWSRGIR VPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDEED
Sbjct: 61  NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDEED 120

[Close]

BLAST of Sed0026426 vs. ExPASy TrEMBL
Match: A0A5D3CFU7 (60S ribosomal protein L31 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G002650 PE=3 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 9.2e-57
Identity = 117/120 (97.50%), Postives = 118/120 (98.33%), Query Frame = 0


Query: 1   MVEKTKGRKEEVVAREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKL 60
           MVEKTKGRKEEVV+REYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKL
Sbjct: 1   MVEKTKGRKEEVVSREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKL 60

Query: 61  NKQIWSRGIRGVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDEED 120
           NK IWSRGIR VPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDEED
Sbjct: 61  NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDEED 120

[Close]

BLAST of Sed0026426 vs. ExPASy TrEMBL
Match: A0A1S3BR53 (60S ribosomal protein L31 OS=Cucumis melo OX=3656 GN=LOC103492289 PE=3 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 9.2e-57
Identity = 117/120 (97.50%), Postives = 118/120 (98.33%), Query Frame = 0


Query: 1   MVEKTKGRKEEVVAREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKL 60
           MVEKTKGRKEEVV+REYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKL
Sbjct: 1   MVEKTKGRKEEVVSREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKL 60

Query: 61  NKQIWSRGIRGVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDEED 120
           NK IWSRGIR VPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDEED
Sbjct: 61  NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDEED 120

[Close]

BLAST of Sed0026426 vs. ExPASy TrEMBL
Match: A0A6J1JK56 (60S ribosomal protein L31-like OS=Cucurbita maxima OX=3661 GN=LOC111485311 PE=3 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 2.1e-56
Identity = 116/120 (96.67%), Postives = 118/120 (98.33%), Query Frame = 0


Query: 1   MVEKTKGRKEEVVAREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKL 60
           MVEKTKGRKEEVV+REYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKL
Sbjct: 1   MVEKTKGRKEEVVSREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKL 60

Query: 61  NKQIWSRGIRGVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDEED 120
           NK IWSRGIR VPRRIRVRIARKRNDDEDAKEELYSLVTV+EIPAEGLKGLGTKVIDEED
Sbjct: 61  NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVSEIPAEGLKGLGTKVIDEED 120

[Close]

BLAST of Sed0026426 vs. ExPASy TrEMBL
Match: A0A6J1CV98 (60S ribosomal protein L31 OS=Momordica charantia OX=3673 GN=LOC111014586 PE=3 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 3.5e-56
Identity = 116/120 (96.67%), Postives = 117/120 (97.50%), Query Frame = 0


Query: 1   MVEKTKGRKEEVVAREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKL 60
           MVEKTKGRKEEVV+REYTINLHKRLHGCTFKKKAP AIKEIRKFAEKAMGTKDVRVDVKL
Sbjct: 1   MVEKTKGRKEEVVSREYTINLHKRLHGCTFKKKAPNAIKEIRKFAEKAMGTKDVRVDVKL 60

Query: 61  NKQIWSRGIRGVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDEED 120
           NK IWSRGIR VPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDEED
Sbjct: 61  NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDEED 120

[Close]

BLAST of Sed0026426 vs. TAIR 10
Match: AT5G56710.1 (Ribosomal protein L31e family protein )

HSP 1 Score: 209.1 bits (531), Expect = 1.9e-54
Identity = 104/119 (87.39%), Postives = 112/119 (94.12%), Query Frame = 0


Query: 2   VEKTKGRKEEVVAREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLN 61
           + + KGRKEEV+ REYTINLH+RLH CTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLN
Sbjct: 1   MSEKKGRKEEVITREYTINLHRRLHKCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLN 60

Query: 62  KQIWSRGIRGVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDEED 121
           KQIWS+GIRG PRRIRVR+ARKRNDDEDAKEE +SLVTVAEIPAEGL GLGTKVI+EED
Sbjct: 61  KQIWSKGIRGPPRRIRVRVARKRNDDEDAKEEFFSLVTVAEIPAEGLSGLGTKVIEEED 119

[Close]

BLAST of Sed0026426 vs. TAIR 10
Match: AT4G26230.1 (Ribosomal protein L31e family protein )

HSP 1 Score: 208.0 bits (528), Expect = 4.2e-54
Identity = 103/119 (86.55%), Postives = 111/119 (93.28%), Query Frame = 0


Query: 2   VEKTKGRKEEVVAREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLN 61
           + + KGRKEEVV REYTINLH+RLH CTFKKKAPKAIKEIRKFAEK MGTKDVRVDVKLN
Sbjct: 1   MSEKKGRKEEVVTREYTINLHRRLHSCTFKKKAPKAIKEIRKFAEKEMGTKDVRVDVKLN 60

Query: 62  KQIWSRGIRGVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDEED 121
           KQIWS+GIRG PRRIRVR+ARKRNDDEDAKEE +SLVTVAEIPAEGL GLGTK+I+EED
Sbjct: 61  KQIWSKGIRGPPRRIRVRVARKRNDDEDAKEEFFSLVTVAEIPAEGLSGLGTKIIEEED 119

[Close]

BLAST of Sed0026426 vs. TAIR 10
Match: AT2G19740.1 (Ribosomal protein L31e family protein )

HSP 1 Score: 206.8 bits (525), Expect = 9.5e-54
Identity = 104/119 (87.39%), Postives = 111/119 (93.28%), Query Frame = 0


Query: 2   VEKTKGRKEEVVAREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLN 61
           +EK KGRKEEVV REYTINLH+RLH CTFKKKAP AIKEIRKFA KAMGTKDVRVDVKLN
Sbjct: 1   MEKGKGRKEEVVTREYTINLHRRLHSCTFKKKAPNAIKEIRKFALKAMGTKDVRVDVKLN 60

Query: 62  KQIWSRGIRGVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDEED 121
           KQIWS+GIRG PRRIRVR+ARKRNDDEDAKEE +SLVTVAEIPAEGL GLGTKVI+EE+
Sbjct: 61  KQIWSKGIRGPPRRIRVRVARKRNDDEDAKEEFFSLVTVAEIPAEGLSGLGTKVIEEEE 119

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BLAST of Sed0026426 vs. TAIR 10
Match: AT5G56710.2 (Ribosomal protein L31e family protein )

HSP 1 Score: 130.2 bits (326), Expect = 1.1e-30
Identity = 73/119 (61.34%), Postives = 79/119 (66.39%), Query Frame = 0


Query: 2   VEKTKGRKEEVVAREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLN 61
           + + KGRKEEV+ REYTINLH+RLH CTFKKKAPKAIKEIRKFAEKAMGTKDVRVD    
Sbjct: 1   MSEKKGRKEEVITREYTINLHRRLHKCTFKKKAPKAIKEIRKFAEKAMGTKDVRVD---- 60

Query: 62  KQIWSRGIRGVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDEED 121
                                         EE +SLVTVAEIPAEGL GLGTKVI+EED
Sbjct: 61  ------------------------------EEFFSLVTVAEIPAEGLSGLGTKVIEEED 85

The following BLAST results are available for this feature:

BLAST of Sed0026426 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008450816.1	1.9e-56	97.50	PREDICTED: 60S ribosomal protein L31 [Cucumis melo] >XP_022928007.1 60S ribosoma...	[more]
KAG6589975.1	1.9e-56	97.50	60S ribosomal protein L31, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_038878471.1	2.5e-56	97.50	60S ribosomal protein L31 [Benincasa hispida] >XP_038878472.1 60S ribosomal prot...	[more]
XP_022987909.1	4.3e-56	96.67	60S ribosomal protein L31-like [Cucurbita maxima]	[more]
XP_022145069.1	7.3e-56	96.67	60S ribosomal protein L31 [Momordica charantia] >XP_022145070.1 60S ribosomal pr...	[more]

BLAST of Sed0026426 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P46290	1.7e-55	90.00	60S ribosomal protein L31 OS=Nicotiana glutinosa OX=35889 GN=RPL31 PE=2 SV=1	[more]
Q9MAV7	1.9e-54	89.17	60S ribosomal protein L31 OS=Panax ginseng OX=4054 GN=RPL31 PE=2 SV=1	[more]
P51420	2.7e-53	87.39	60S ribosomal protein L31-3 OS=Arabidopsis thaliana OX=3702 GN=RPL31C PE=3 SV=2	[more]
Q9STR1	6.0e-53	86.55	60S ribosomal protein L31-2 OS=Arabidopsis thaliana OX=3702 GN=RPL31B PE=3 SV=1	[more]
Q9SLL7	1.3e-52	87.39	60S ribosomal protein L31-1 OS=Arabidopsis thaliana OX=3702 GN=RPL31A PE=3 SV=1	[more]

BLAST of Sed0026426 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EIQ4	9.2e-57	97.50	60S ribosomal protein L31 OS=Cucurbita moschata OX=3662 GN=LOC111434907 PE=3 SV=...	[more]
A0A5D3CFU7	9.2e-57	97.50	60S ribosomal protein L31 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A1S3BR53	9.2e-57	97.50	60S ribosomal protein L31 OS=Cucumis melo OX=3656 GN=LOC103492289 PE=3 SV=1	[more]
A0A6J1JK56	2.1e-56	96.67	60S ribosomal protein L31-like OS=Cucurbita maxima OX=3661 GN=LOC111485311 PE=3 ...	[more]
A0A6J1CV98	3.5e-56	96.67	60S ribosomal protein L31 OS=Momordica charantia OX=3673 GN=LOC111014586 PE=3 SV...	[more]

BLAST of Sed0026426 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G56710.1	1.9e-54	87.39	Ribosomal protein L31e family protein	[more]
AT4G26230.1	4.2e-54	86.55	Ribosomal protein L31e family protein	[more]
AT2G19740.1	9.5e-54	87.39	Ribosomal protein L31e family protein	[more]
AT5G56710.2	1.1e-30	61.34	Ribosomal protein L31e family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000054	Ribosomal protein L31e	SMART	SM01380	Ribosomal_L31e_2	coord: 10..93 e-value: 2.1E-49 score: 180.1
IPR000054	Ribosomal protein L31e	PFAM	PF01198	Ribosomal_L31e	coord: 11..92 e-value: 1.8E-42 score: 143.4
IPR000054	Ribosomal protein L31e	PANTHER	PTHR10956	60S RIBOSOMAL PROTEIN L31	coord: 1..120
IPR000054	Ribosomal protein L31e	CDD	cd00463	Ribosomal_L31e	coord: 9..92 e-value: 3.36304E-32 score: 106.5
IPR023621	Ribosomal protein L31e domain superfamily	GENE3D	3.10.440.10		coord: 9..120 e-value: 2.0E-49 score: 168.2
IPR023621	Ribosomal protein L31e domain superfamily	SUPERFAMILY	54575	Ribosomal protein L31e	coord: 11..92
None	No IPR available	PANTHER	PTHR10956:SF33	60S RIBOSOMAL PROTEIN L31-2-RELATED	coord: 1..120
IPR020052	Ribosomal protein L31e, conserved site	PROSITE	PS01144	RIBOSOMAL_L31E	coord: 54..68

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0026426.1	Sed0026426.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0002181	cytoplasmic translation
biological_process	GO:0006412	translation
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003735	structural constituent of ribosome