Homology
BLAST of Sed0026391 vs. NCBI nr
Match:
XP_038887593.1 (mediator of RNA polymerase II transcription subunit 33B isoform X1 [Benincasa hispida])
HSP 1 Score: 2332.0 bits (6042), Expect = 0.0e+00
Identity = 1195/1336 (89.45%), Postives = 1262/1336 (94.46%), Query Frame = 0
Query: 23 MAVSDPPPGQLPVVSGLWDRVLELTKSAQAKNRDPLLWALQLSSTLDSARVSLPSLELAH 82
MAVS PPGQL +SGLWD VLELTKSAQ KN DPLLWA+QLSSTL+SA VSLPS+ELA
Sbjct: 1 MAVSTQPPGQLQEISGLWDSVLELTKSAQDKNCDPLLWAVQLSSTLNSAGVSLPSVELAQ 60
Query: 83 VLVSHICWDNHVPITWKFLDQAMTANIVPPLLVIALLSTRAIPYRKLRTAAYRLYLELLN 142
+LVSHICWDNHVPI WKFL++AMTA IVPPLLVIALLSTRAIPYRKLR AAYRLYLE+L+
Sbjct: 61 LLVSHICWDNHVPIMWKFLEKAMTARIVPPLLVIALLSTRAIPYRKLRPAAYRLYLEVLS 120
Query: 143 RHIFSLTLQINGPNYQRIMQTIDDVLHLSQIFGLQTCEPGLLMVELFFSIVWQLLDASLD 202
RHIFSLT QINGPNYQRIMQTIDDVLHL+QIFG+QTCEPG+LMVELFFSIVWQLLDASLD
Sbjct: 121 RHIFSLTSQINGPNYQRIMQTIDDVLHLTQIFGVQTCEPGVLMVELFFSIVWQLLDASLD 180
Query: 203 DEELLVLPAEERSAWLIRPQPHDMKLDVHESLSEKRTENGERLLKINNEKAIELIGQFLQ 262
DE LL LP EE+S WLIRPQ HDM+LDVH+S EKRTEN E LLK+N KAIE+IGQFLQ
Sbjct: 181 DEGLLALPGEEKSVWLIRPQLHDMELDVHDSFGEKRTENSESLLKVNTAKAIEIIGQFLQ 240
Query: 263 NKKTARILCLAQQNMPLHWAGFARRLQLLAANSVVLKNTKLITSEVLLHWTSDKHRLLSR 322
NKKTARILCLA +NMPLHWAGFA+RL+LLAANSVVL+NTKLIT EVLLHWTSDK +LLS+
Sbjct: 241 NKKTARILCLALRNMPLHWAGFAQRLKLLAANSVVLRNTKLITPEVLLHWTSDKSKLLSQ 300
Query: 323 EGETTSQLVFRDVIMASGSLFSSAGQSHGVNLSALWLPIDLFLEDAMDGSQVLATSAVER 382
EG+ T QL FRDV MASGSLFSSAGQSHGVN SALWLPIDLFLEDAMDGSQVLATSAVER
Sbjct: 301 EGK-TCQLEFRDV-MASGSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVER 360
Query: 383 LICLTKSLRAVNDTSWHHTFLGLWIAALRLIQRERNPSEGPVPRLDTCLCMLLSITTLAV 442
LICL KSLRAVND+SWH+TFLGLWIAALRLIQRER+PSEGPVPRLDTCLCMLLSI+TLAV
Sbjct: 361 LICLIKSLRAVNDSSWHNTFLGLWIAALRLIQRERDPSEGPVPRLDTCLCMLLSISTLAV 420
Query: 443 TIIIEEEECELKEEECSPSKSRDERQSSGKCRKGLITSLQMLGEYESLLAPPQSVIAVAN 502
TIIIEEEE E+KE+ECS SKSRDE+QSSG CRKGLITSLQMLGEYESLL PPQSVIAVAN
Sbjct: 421 TIIIEEEEGEVKEDECSASKSRDEKQSSGMCRKGLITSLQMLGEYESLLIPPQSVIAVAN 480
Query: 503 QAAAKAVMFIAGVAVGNEYYDCVSMNDTPIKCSGNMRHLIVEACISRNLLDTSAYFWPGY 562
QAAAKAVMFI+GVAVGNEY+DCVSM+DTPI CSGNMRHLIVEACISRNLLDTSAYFWPGY
Sbjct: 481 QAAAKAVMFISGVAVGNEYHDCVSMSDTPINCSGNMRHLIVEACISRNLLDTSAYFWPGY 540
Query: 563 VNARKSQVPSSTSGQVVGWSSFMKGSSLTPSMINALVATPASSLAEIEKIYEIAENGSVD 622
NAR SQVP S S QVVGWSSFMKGSSLTPSM+NALVATPASSLAEIEKIYEIA NGS D
Sbjct: 541 ANARSSQVPRSASSQVVGWSSFMKGSSLTPSMVNALVATPASSLAEIEKIYEIAINGSGD 600
Query: 623 EKISAASVLCGASLVRGWNIQEHIVLFIARLLSPPIPADYSGNDSYLIDYASFLNALLVG 682
EKISAAS+LCGASLVRGWN+QEH LFI+RLLSPPIP DYSG++SYLIDYA FLN LLVG
Sbjct: 601 EKISAASILCGASLVRGWNLQEHTALFISRLLSPPIPTDYSGSESYLIDYAPFLNVLLVG 660
Query: 683 ISSVDCVQIFSLHGMVPLLAGQLMPICEAFGSSPPKSWILTSGEELTCRAVFSLAFTLLL 742
ISSVDCVQIFSLHGMVPLLAGQLMPICEAFGS PKSWILTSGEELTC AVFSLAFTLLL
Sbjct: 661 ISSVDCVQIFSLHGMVPLLAGQLMPICEAFGSCSPKSWILTSGEELTCHAVFSLAFTLLL 720
Query: 743 RLWRFHHPPVENVKGDARPVGSQLTPEYLLLVRNTQLASFGQSPKDRLRAKRLSKLLKFS 802
RLWRFHHPPVENVKGDARPVGSQLTPEYLLLVRN+QLASFG+SPKDRL+A+RLSKLLKFS
Sbjct: 721 RLWRFHHPPVENVKGDARPVGSQLTPEYLLLVRNSQLASFGKSPKDRLKARRLSKLLKFS 780
Query: 803 VKPVYMDAFPKLKGWYRQHQECIASILPGLVPGAPVHQIVDALMIMMFKKINRGGQSLAS 862
++P++MD+FPKLKGWYRQHQECIASIL GL+PGAPVHQIVDAL+ MMF+KINR GQSL S
Sbjct: 781 LEPIFMDSFPKLKGWYRQHQECIASILSGLIPGAPVHQIVDALLTMMFRKINRAGQSLTS 840
Query: 863 TTSGSSNTSGSASEEASIKLKVPAWDILKATPFVLDAALTACAHGRLSTRDLATGLKDLA 922
TTSGSSN+SGSA+EEASIKLKVPAWDIL+ATPFVLDAALTACAHGRLS RDLATGLKDLA
Sbjct: 841 TTSGSSNSSGSANEEASIKLKVPAWDILEATPFVLDAALTACAHGRLSPRDLATGLKDLA 900
Query: 923 DFLPATFATIVSYFSAEVTRGIWKPAFMNGTDWPSPAATLSIVEQQIKSILAATGVDVPS 982
DFLPA+FATIVSYFSAEVTRGIWKPAFMNGTDWPSPAATLSIVEQQIK ILAATGVDVPS
Sbjct: 901 DFLPASFATIVSYFSAEVTRGIWKPAFMNGTDWPSPAATLSIVEQQIKKILAATGVDVPS 960
Query: 983 LAVGGTSPATLPLPLAALISLTITYKLDKASERLLALVGPALNSIAASCSWPCTPIIASL 1042
LAVGG+SPA LPLPLAALISLTITYKLDKASERLLALVGPALNS+AASCSWPCTPIIASL
Sbjct: 961 LAVGGSSPAMLPLPLAALISLTITYKLDKASERLLALVGPALNSLAASCSWPCTPIIASL 1020
Query: 1043 WSQKVKRWNDFLVFSASRTVFHHNMDAVVQLLKSCFTSTLGLGNSNVFSSGGVGSLLGHG 1102
W+QKVKRWNDFLVFSASRTVFHH DAVVQLLKSCFTSTLGLGNSNV SSGGVG+LLGHG
Sbjct: 1021 WAQKVKRWNDFLVFSASRTVFHHTSDAVVQLLKSCFTSTLGLGNSNVNSSGGVGTLLGHG 1080
Query: 1103 FGSNVLGGMSPVAPGILYLRVHRSMRDSLFMVEEIVSILMLSVRDIAVSGLPKEKAEKLK 1162
FGS+VLGGMSPVAPGILYLRVHRS+RD LF+VEEIVS+LMLSVRDIAVSGLPKEKAEKLK
Sbjct: 1081 FGSHVLGGMSPVAPGILYLRVHRSVRDVLFLVEEIVSLLMLSVRDIAVSGLPKEKAEKLK 1140
Query: 1163 KAKYGMRYEQVSFASAMARVKLAASLGASLVWIFGGSGLVQSLFKETLPSWFLSVHSVER 1222
K KYGMRYEQVSFASAMARVKLAASLGASLVWI GGSGLVQSLFKETLPSWFLSV SVER
Sbjct: 1141 KTKYGMRYEQVSFASAMARVKLAASLGASLVWISGGSGLVQSLFKETLPSWFLSVQSVER 1200
Query: 1223 EGVECGGMVAVLGGYALAFFSVLCGTFSWGIDSASSASKRRAKILDSHLEFLASALDGKF 1282
EGVE GGMVAVL GYALAFFSVLCGTFSWGIDS+SSASKRRAKILDS LEFLASALDGKF
Sbjct: 1201 EGVEYGGMVAVLRGYALAFFSVLCGTFSWGIDSSSSASKRRAKILDSFLEFLASALDGKF 1260
Query: 1283 SIGCDWGTWRAYVSGFVSLMVRCAPRWLLEVDVNLLKRLSKGLRQLNEEELALALLESGG 1342
SIGCDW TWRAYVSGFVSLMVRCAPRWLLEVD+NLLKRLS GLRQLNEE+LALALL SGG
Sbjct: 1261 SIGCDWATWRAYVSGFVSLMVRCAPRWLLEVDLNLLKRLSNGLRQLNEEQLALALLGSGG 1320
Query: 1343 VNAMGAAAELIIEGGF 1359
V AMGAAAELIIEGGF
Sbjct: 1321 VTAMGAAAELIIEGGF 1334
BLAST of Sed0026391 vs. NCBI nr
Match:
XP_022155567.1 (mediator of RNA polymerase II transcription subunit 33B-like [Momordica charantia])
HSP 1 Score: 2330.1 bits (6037), Expect = 0.0e+00
Identity = 1190/1337 (89.01%), Postives = 1261/1337 (94.32%), Query Frame = 0
Query: 23 MAVSDPPPGQLPVVSGLWDRVLELTKSAQAKNRDPLLWALQLSSTLDSARVSLPSLELAH 82
M VS PP QL ++GLWD VLELTKSAQ KN DPLLWA+QLSS+L+SA VSLPS+ELA
Sbjct: 1 MVVSVQPPSQLQGMAGLWDSVLELTKSAQDKNCDPLLWAVQLSSSLNSAGVSLPSIELAQ 60
Query: 83 VLVSHICWDNHVPITWKFLDQAMTANIVPPLLVIALLSTRAIPYRKLRTAAYRLYLELLN 142
+LVSHICWDNHVPI WKFL++AMTA IVPPLLV+ALLSTRAIPYRKLR AAYRLYLELL+
Sbjct: 61 LLVSHICWDNHVPIMWKFLEKAMTAKIVPPLLVVALLSTRAIPYRKLRPAAYRLYLELLS 120
Query: 143 RHIFSLTLQINGPNYQRIMQTIDDVLHLSQIFGLQTCEPGLLMVELFFSIVWQLLDASLD 202
RH+FS T QINGPNYQRIMQTIDDVLHLSQIF LQ CEPGLLMVELFFSIVWQLLDASLD
Sbjct: 121 RHVFSSTSQINGPNYQRIMQTIDDVLHLSQIFSLQACEPGLLMVELFFSIVWQLLDASLD 180
Query: 203 DEELLVLPAEERSAWLIRPQPHDMKLDVHESLSEKRTENGERLLKINNEKAIELIGQFLQ 262
DE LLVLPAEERSAWLIRPQPHDM+LDVH+S SEKRTEN E LLK+N KAIE+IGQFLQ
Sbjct: 181 DEGLLVLPAEERSAWLIRPQPHDMELDVHDSFSEKRTENSESLLKVNTAKAIEIIGQFLQ 240
Query: 263 NKKTARILCLAQQNMPLHWAGFARRLQLLAANSVVLKNTKLITSEVLLHWTSDKHRLLSR 322
NKKTARIL LA +NMPLHWAGFA+RLQLLAANS VL+NTKLIT EVLLHWTSDKHRLLSR
Sbjct: 241 NKKTARILYLAHRNMPLHWAGFAQRLQLLAANSAVLRNTKLITPEVLLHWTSDKHRLLSR 300
Query: 323 EGETTSQLVFRDVIMASGSLFSSAGQSHGVNLSALWLPIDLFLEDAMDGSQVLATSAVER 382
EG+ TSQ FR+V MASGSLFSSAGQSHGVN S LWLPIDLFLEDAMDGSQVLATSAVER
Sbjct: 301 EGK-TSQQEFRNV-MASGSLFSSAGQSHGVNWSTLWLPIDLFLEDAMDGSQVLATSAVER 360
Query: 383 LICLTKSLRAVNDTSWHHTFLGLWIAALRLIQRERNPSEGPVPRLDTCLCMLLSITTLAV 442
LICL KSL+AVNDTSWH+TF+GLWIAALRLIQRER+PSEGPVPRLDTCLCMLLSITTLAV
Sbjct: 361 LICLIKSLQAVNDTSWHNTFMGLWIAALRLIQRERDPSEGPVPRLDTCLCMLLSITTLAV 420
Query: 443 TIIIEEEECELKEE-ECSPSKSRDERQSSGKCRKGLITSLQMLGEYESLLAPPQSVIAVA 502
TIIIEE+E ELKEE ECSPSK RDE++ SGKCRKGLITSLQMLGEYE LL PPQSV A+A
Sbjct: 421 TIIIEEDEGELKEEDECSPSKGRDEKKCSGKCRKGLITSLQMLGEYEGLLTPPQSVTAIA 480
Query: 503 NQAAAKAVMFIAGVAVGNEYYDCVSMNDTPIKCSGNMRHLIVEACISRNLLDTSAYFWPG 562
NQAAAKAVMFI+GVAVGNEYYDCVSMNDTP+ CSGNMRHLIVEACISRNLLDTS YFWPG
Sbjct: 481 NQAAAKAVMFISGVAVGNEYYDCVSMNDTPVNCSGNMRHLIVEACISRNLLDTSVYFWPG 540
Query: 563 YVNARKSQVPSSTSGQVVGWSSFMKGSSLTPSMINALVATPASSLAEIEKIYEIAENGSV 622
YVNAR SQVP S SGQVVGWSSFMKGSSLT SM++ALVATPASSLAEIEKIYEIA NGS
Sbjct: 541 YVNARSSQVPRSASGQVVGWSSFMKGSSLTLSMVDALVATPASSLAEIEKIYEIAVNGSG 600
Query: 623 DEKISAASVLCGASLVRGWNIQEHIVLFIARLLSPPIPADYSGNDSYLIDYASFLNALLV 682
DEKISAAS+LCG SLVRGWN+QEH VLFIARLLSPPIPADYSG+DSYLIDYA FLN LLV
Sbjct: 601 DEKISAASILCGESLVRGWNLQEHTVLFIARLLSPPIPADYSGSDSYLIDYAPFLNVLLV 660
Query: 683 GISSVDCVQIFSLHGMVPLLAGQLMPICEAFGSSPPKSWILTSGEELTCRAVFSLAFTLL 742
GISSVDCVQIFSLHGMVPLLAGQLMPICEAFG SPPKSW+LTSGEELTC AVFSLAFTLL
Sbjct: 661 GISSVDCVQIFSLHGMVPLLAGQLMPICEAFGLSPPKSWVLTSGEELTCHAVFSLAFTLL 720
Query: 743 LRLWRFHHPPVENVKGDARPVGSQLTPEYLLLVRNTQLASFGQSPKDRLRAKRLSKLLKF 802
LRLWRFHHPPVENVK DARPVGSQLTPEYLLLVRN+QLASFG+SPKDR + +RLSKLLKF
Sbjct: 721 LRLWRFHHPPVENVKRDARPVGSQLTPEYLLLVRNSQLASFGKSPKDRFKVRRLSKLLKF 780
Query: 803 SVKPVYMDAFPKLKGWYRQHQECIASILPGLVPGAPVHQIVDALMIMMFKKINRGGQSLA 862
S++P++MD+FPKLKGWYRQHQECIASIL GLVPGAPVHQIVDAL+ MMF+KINRGG SL
Sbjct: 781 SLEPIFMDSFPKLKGWYRQHQECIASILSGLVPGAPVHQIVDALLTMMFRKINRGGHSLT 840
Query: 863 STTSGSSNTSGSASEEASIKLKVPAWDILKATPFVLDAALTACAHGRLSTRDLATGLKDL 922
STTSGSSN+SGSA+EEASIKLKVPAWDIL+ATPFVLDAALTACAHGRLS RDLATGLKDL
Sbjct: 841 STTSGSSNSSGSANEEASIKLKVPAWDILEATPFVLDAALTACAHGRLSPRDLATGLKDL 900
Query: 923 ADFLPATFATIVSYFSAEVTRGIWKPAFMNGTDWPSPAATLSIVEQQIKSILAATGVDVP 982
ADFLPA+FATIVSYFSAEVTRGIWKPAFMNGTDWPSPAATLSIVEQQIK ILAATGVDVP
Sbjct: 901 ADFLPASFATIVSYFSAEVTRGIWKPAFMNGTDWPSPAATLSIVEQQIKKILAATGVDVP 960
Query: 983 SLAVGGTSPATLPLPLAALISLTITYKLDKASERLLALVGPALNSIAASCSWPCTPIIAS 1042
SLAVGG SPA LPLPLAALISLTITYKLDKASERLLALVGPALN++AASCSWPCTPIIAS
Sbjct: 961 SLAVGGNSPAMLPLPLAALISLTITYKLDKASERLLALVGPALNTLAASCSWPCTPIIAS 1020
Query: 1043 LWSQKVKRWNDFLVFSASRTVFHHNMDAVVQLLKSCFTSTLGLGNSNVFSSGGVGSLLGH 1102
LW+QKVKRWNDFLVFSASRTVFHHN DAVVQLLKSCFTSTLGLGNSN+ S+GGVG+LLGH
Sbjct: 1021 LWAQKVKRWNDFLVFSASRTVFHHNSDAVVQLLKSCFTSTLGLGNSNLNSNGGVGTLLGH 1080
Query: 1103 GFGSNVLGGMSPVAPGILYLRVHRSMRDSLFMVEEIVSILMLSVRDIAVSGLPKEKAEKL 1162
GFGS+VLGGMSPVAPGILYLRVHRS+RD+LFMVEEIVS+LMLSVRDIAVSGLP+EKAEKL
Sbjct: 1081 GFGSHVLGGMSPVAPGILYLRVHRSVRDALFMVEEIVSLLMLSVRDIAVSGLPREKAEKL 1140
Query: 1163 KKAKYGMRYEQVSFASAMARVKLAASLGASLVWIFGGSGLVQSLFKETLPSWFLSVHSVE 1222
KK K+GMRYEQVSFASAM+RVKLAASLGASLVWI GGSGLVQSLFKETLPSWFLSVHS+E
Sbjct: 1141 KKTKHGMRYEQVSFASAMSRVKLAASLGASLVWISGGSGLVQSLFKETLPSWFLSVHSLE 1200
Query: 1223 REGVECGGMVAVLGGYALAFFSVLCGTFSWGIDSASSASKRRAKILDSHLEFLASALDGK 1282
REGVE GGMVAVLGGYALAFFSVLCGTFSWGIDS SSASKRRAKILDSHLEFLASALDGK
Sbjct: 1201 REGVEYGGMVAVLGGYALAFFSVLCGTFSWGIDSVSSASKRRAKILDSHLEFLASALDGK 1260
Query: 1283 FSIGCDWGTWRAYVSGFVSLMVRCAPRWLLEVDVNLLKRLSKGLRQLNEEELALALLESG 1342
FSIGCDW TWRAYVSGFVSLMVRCAP+W++EVDVN+LKRLS GLRQL+EEELALALLESG
Sbjct: 1261 FSIGCDWATWRAYVSGFVSLMVRCAPKWVVEVDVNILKRLSNGLRQLSEEELALALLESG 1320
Query: 1343 GVNAMGAAAELIIEGGF 1359
GV AMGAAAELIIEGGF
Sbjct: 1321 GVTAMGAAAELIIEGGF 1335
BLAST of Sed0026391 vs. NCBI nr
Match:
XP_023554812.1 (mediator of RNA polymerase II transcription subunit 33B-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 2328.1 bits (6032), Expect = 0.0e+00
Identity = 1185/1337 (88.63%), Postives = 1257/1337 (94.02%), Query Frame = 0
Query: 23 MAVSDPPPGQLPVVSGLWDRVLELTKSAQAKNRDPLLWALQLSSTLDSARVSLPSLELAH 82
MAVS PPGQL ++G+WD VLELTKSAQ KN DPLLWA+QLSS+L+SA VSLPS+ELAH
Sbjct: 1 MAVSAQPPGQLQGIAGVWDTVLELTKSAQEKNSDPLLWAVQLSSSLNSASVSLPSVELAH 60
Query: 83 VLVSHICWDNHVPITWKFLDQAMTANIVPPLLVIALLSTRAIPYRKLRTAAYRLYLELLN 142
+LVSHICWDNHVPI WKFL++AMTA IVPPLLVIALLSTRAIPYRKLR AAYRLYLELL+
Sbjct: 61 LLVSHICWDNHVPIMWKFLEKAMTARIVPPLLVIALLSTRAIPYRKLRPAAYRLYLELLS 120
Query: 143 RHIFSLTLQINGPNYQRIMQTIDDVLHLSQIFGLQTCEPGLLMVELFFSIVWQLLDASLD 202
RH+FS TL++NGPNY RIMQTIDDVLHLSQIFGLQTCEPGLLMVELFFSIVW LLDASLD
Sbjct: 121 RHVFSSTLEVNGPNYPRIMQTIDDVLHLSQIFGLQTCEPGLLMVELFFSIVWHLLDASLD 180
Query: 203 DEELLVLPAEERSAWLIRPQPHDMKLDVHESLSEKRTENGERLLKINNEKAIELIGQFLQ 262
DE LL LPAEERS WLIRPQPHDM+LDVH+S EK+TEN E LLK+N KAIE+IGQFLQ
Sbjct: 181 DEGLLELPAEERSVWLIRPQPHDMELDVHDSFGEKKTENSENLLKVNTAKAIEIIGQFLQ 240
Query: 263 NKKTARILCLAQQNMPLHWAGFARRLQLLAANSVVLKNTKLITSEVLLHWTSDKHRLLSR 322
NKKTARILCLA QNMPLHWAGFA+RLQLLAANSVVL+NTKLIT EVLLHWTSDKHR LS+
Sbjct: 241 NKKTARILCLAHQNMPLHWAGFAQRLQLLAANSVVLRNTKLITPEVLLHWTSDKHRFLSQ 300
Query: 323 EGETTSQLVFRDVIMASGSLFSSAGQSHGVNLSALWLPIDLFLEDAMDGSQVLATSAVER 382
EG+TTSQL F DV MASGSLFSSAGQSHGVN SALWLPIDLFLEDAMDGSQVLATSAVER
Sbjct: 301 EGKTTSQLEFHDV-MASGSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVER 360
Query: 383 LICLTKSLRAVNDTSWHHTFLGLWIAALRLIQRERNPSEGPVPRLDTCLCMLLSITTLAV 442
LICL KSLRAVND SWH+TFLGLWIAALRLIQRER+PSEGPVPRLDTCLCMLLSITTLAV
Sbjct: 361 LICLIKSLRAVNDASWHNTFLGLWIAALRLIQRERDPSEGPVPRLDTCLCMLLSITTLAV 420
Query: 443 TIIIEEEECELKEE-ECSPSKSRDERQSSGKCRKGLITSLQMLGEYESLLAPPQSVIAVA 502
TIIIEEEE ELKEE ECSPSKSRDE+QSSGK R+GLITSLQMLGEYESLL PPQSVI VA
Sbjct: 421 TIIIEEEEGELKEEDECSPSKSRDEKQSSGKRRQGLITSLQMLGEYESLLTPPQSVIVVA 480
Query: 503 NQAAAKAVMFIAGVAVGNEYYDCVSMNDTPIKCSGNMRHLIVEACISRNLLDTSAYFWPG 562
NQAAAKAVMFI+GVAVGNEYYDCVSMNDTPI CSGNMRHLIVEACISRNLLDTSAYFWPG
Sbjct: 481 NQAAAKAVMFISGVAVGNEYYDCVSMNDTPINCSGNMRHLIVEACISRNLLDTSAYFWPG 540
Query: 563 YVNARKSQVPSSTSGQVVGWSSFMKGSSLTPSMINALVATPASSLAEIEKIYEIAENGSV 622
YVN R SQVP S S QVVGWSSFMKGSSLTPSM+NAL ATPASSLAEIEKIYEIA NGS
Sbjct: 541 YVNTRSSQVPRSASSQVVGWSSFMKGSSLTPSMVNALEATPASSLAEIEKIYEIAINGSG 600
Query: 623 DEKISAASVLCGASLVRGWNIQEHIVLFIARLLSPPIPADYSGNDSYLIDYASFLNALLV 682
DEKISAAS+LCGASLVRGWN+QEH VLFI+RLLSPPIPADY G+DSYLIDYA FLN LLV
Sbjct: 601 DEKISAASILCGASLVRGWNLQEHTVLFISRLLSPPIPADYPGSDSYLIDYAPFLNVLLV 660
Query: 683 GISSVDCVQIFSLHGMVPLLAGQLMPICEAFGSSPPKSWILTSGEELTCRAVFSLAFTLL 742
GISSVDCVQIFSLHGMVPLLAGQLMPICEAFGSS PKSWILTSGEELTC AVFSLAFTLL
Sbjct: 661 GISSVDCVQIFSLHGMVPLLAGQLMPICEAFGSSTPKSWILTSGEELTCHAVFSLAFTLL 720
Query: 743 LRLWRFHHPPVENVKGDARPVGSQLTPEYLLLVRNTQLASFGQSPKDRLRAKRLSKLLKF 802
LRLWRFHHPP+ENVKGDARPVGSQLTPEYLLLVRN+QLASFG+SPKDRL+ +RLSKLLKF
Sbjct: 721 LRLWRFHHPPIENVKGDARPVGSQLTPEYLLLVRNSQLASFGKSPKDRLKVRRLSKLLKF 780
Query: 803 SVKPVYMDAFPKLKGWYRQHQECIASILPGLVPGAPVHQIVDALMIMMFKKINRGGQSLA 862
S++P +MD+FPKLKGWYRQHQECIASI PGLVPGAPVHQ VDAL+ MMFKKINRGGQSL
Sbjct: 781 SLEPTFMDSFPKLKGWYRQHQECIASIPPGLVPGAPVHQTVDALLTMMFKKINRGGQSLT 840
Query: 863 STTSGSSNTSGSASEEASIKLKVPAWDILKATPFVLDAALTACAHGRLSTRDLATGLKDL 922
STTS SSN+SGSA+EEASIKLKVPAWDIL+ATPFVLDAALTACAHGRLS RDLATGLKDL
Sbjct: 841 STTSASSNSSGSANEEASIKLKVPAWDILEATPFVLDAALTACAHGRLSPRDLATGLKDL 900
Query: 923 ADFLPATFATIVSYFSAEVTRGIWKPAFMNGTDWPSPAATLSIVEQQIKSILAATGVDVP 982
ADFLPA+FATIV YFSAEVTRGIWKPAFMNGTDWPSPAATLS+VEQQIK ILAATGVDVP
Sbjct: 901 ADFLPASFATIVCYFSAEVTRGIWKPAFMNGTDWPSPAATLSVVEQQIKKILAATGVDVP 960
Query: 983 SLAVGGTSPATLPLPLAALISLTITYKLDKASERLLALVGPALNSIAASCSWPCTPIIAS 1042
SLA+GG+ PA LPLPLAALISLTITYKLDKASERLLALVGPALNS+ A CSWPCTPIIAS
Sbjct: 961 SLALGGSFPAMLPLPLAALISLTITYKLDKASERLLALVGPALNSLVAGCSWPCTPIIAS 1020
Query: 1043 LWSQKVKRWNDFLVFSASRTVFHHNMDAVVQLLKSCFTSTLGLGNSNVFSSGGVGSLLGH 1102
LW+QKVKRWNDFLVFSASRTVFHHN DAVVQLLKSCFTSTLGLGNSNV S GGVG+LLGH
Sbjct: 1021 LWAQKVKRWNDFLVFSASRTVFHHNSDAVVQLLKSCFTSTLGLGNSNVNSGGGVGALLGH 1080
Query: 1103 GFGSNVLGGMSPVAPGILYLRVHRSMRDSLFMVEEIVSILMLSVRDIAVSGLPKEKAEKL 1162
GFGS+VLGGMSPVAPGILYLRVHR +RD+LF+VEEIVS+LMLSV+DIAV+GLPKEKAEKL
Sbjct: 1081 GFGSHVLGGMSPVAPGILYLRVHRCVRDALFLVEEIVSLLMLSVKDIAVTGLPKEKAEKL 1140
Query: 1163 KKAKYGMRYEQVSFASAMARVKLAASLGASLVWIFGGSGLVQSLFKETLPSWFLSVHSVE 1222
KK+K+GMR EQVSFASAMARVKLAASLGASLVWI GGSGLVQSL+KETLPSWFLSVHSV+
Sbjct: 1141 KKSKHGMRCEQVSFASAMARVKLAASLGASLVWISGGSGLVQSLYKETLPSWFLSVHSVD 1200
Query: 1223 REGVECGGMVAVLGGYALAFFSVLCGTFSWGIDSASSASKRRAKILDSHLEFLASALDGK 1282
REGVE GGMV VL GYALAFFSVLCGTFSWGIDS SSASKRRAK+LD+HLEFLASALDGK
Sbjct: 1201 REGVEYGGMVPVLRGYALAFFSVLCGTFSWGIDSISSASKRRAKLLDAHLEFLASALDGK 1260
Query: 1283 FSIGCDWGTWRAYVSGFVSLMVRCAPRWLLEVDVNLLKRLSKGLRQLNEEELALALLESG 1342
FSIGCDW TWRAYVSGFVSL+VRCAP+WLLEVD+ +L+RL KGLRQLNEEELALALLESG
Sbjct: 1261 FSIGCDWATWRAYVSGFVSLLVRCAPKWLLEVDLKVLERLGKGLRQLNEEELALALLESG 1320
Query: 1343 GVNAMGAAAELIIEGGF 1359
G+ AMGAAAELIIEGGF
Sbjct: 1321 GLTAMGAAAELIIEGGF 1336
BLAST of Sed0026391 vs. NCBI nr
Match:
KAG6571443.1 (Mediator of RNA polymerase II transcription subunit 33A, partial [Cucurbita argyrosperma subsp. sororia] >KAG7011209.1 Mediator of RNA polymerase II transcription subunit 33A [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 2324.7 bits (6023), Expect = 0.0e+00
Identity = 1185/1337 (88.63%), Postives = 1254/1337 (93.79%), Query Frame = 0
Query: 23 MAVSDPPPGQLPVVSGLWDRVLELTKSAQAKNRDPLLWALQLSSTLDSARVSLPSLELAH 82
MAVS PPGQL ++G+WD VLELTKSAQ KN DPLLWA+QLSS+L+SA VSLPSLELAH
Sbjct: 1 MAVSAQPPGQLQGIAGVWDTVLELTKSAQEKNSDPLLWAVQLSSSLNSASVSLPSLELAH 60
Query: 83 VLVSHICWDNHVPITWKFLDQAMTANIVPPLLVIALLSTRAIPYRKLRTAAYRLYLELLN 142
+LVSHICWDNHVPI WKFL++AMTA IVPPLLVIALLSTRAIPYRKLR AAYRLYLELL+
Sbjct: 61 LLVSHICWDNHVPIMWKFLEKAMTARIVPPLLVIALLSTRAIPYRKLRPAAYRLYLELLS 120
Query: 143 RHIFSLTLQINGPNYQRIMQTIDDVLHLSQIFGLQTCEPGLLMVELFFSIVWQLLDASLD 202
RH+FS TL++NGPNY RIMQTIDDVLHLSQIF LQTCEPGLLMVELFFSIVW LLDASLD
Sbjct: 121 RHVFSSTLEVNGPNYPRIMQTIDDVLHLSQIFDLQTCEPGLLMVELFFSIVWHLLDASLD 180
Query: 203 DEELLVLPAEERSAWLIRPQPHDMKLDVHESLSEKRTENGERLLKINNEKAIELIGQFLQ 262
DE LL LPAEERS WLIRPQPHDM+LDVH+S EK+TEN E LLK+N KAIE+IGQFLQ
Sbjct: 181 DEGLLELPAEERSVWLIRPQPHDMELDVHDSFGEKKTENSENLLKVNTAKAIEIIGQFLQ 240
Query: 263 NKKTARILCLAQQNMPLHWAGFARRLQLLAANSVVLKNTKLITSEVLLHWTSDKHRLLSR 322
NKKTARILCLA QNMPLHWAGFA+RLQLLAANSVVL+NTKLIT EVLL WTSDKHR LS+
Sbjct: 241 NKKTARILCLAHQNMPLHWAGFAQRLQLLAANSVVLRNTKLITPEVLLQWTSDKHRFLSQ 300
Query: 323 EGETTSQLVFRDVIMASGSLFSSAGQSHGVNLSALWLPIDLFLEDAMDGSQVLATSAVER 382
EG+T SQL F DV MASGSLFSSAGQSHGVN SALWLPIDLFLEDAMDGSQVLATSAVER
Sbjct: 301 EGKTKSQLEFHDV-MASGSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVER 360
Query: 383 LICLTKSLRAVNDTSWHHTFLGLWIAALRLIQRERNPSEGPVPRLDTCLCMLLSITTLAV 442
LICL KSLRAVND SWH+TFLGLWIAALRLIQRER+PSEGPVPRLDTCLCMLLSITTLAV
Sbjct: 361 LICLIKSLRAVNDASWHNTFLGLWIAALRLIQRERDPSEGPVPRLDTCLCMLLSITTLAV 420
Query: 443 TIIIEEEECELKEE-ECSPSKSRDERQSSGKCRKGLITSLQMLGEYESLLAPPQSVIAVA 502
TIIIEEEE ELKEE ECSPSKSRDE+QSSGK R+GLITSLQMLGEYESLL PPQSVI VA
Sbjct: 421 TIIIEEEEGELKEEDECSPSKSRDEKQSSGKRRQGLITSLQMLGEYESLLTPPQSVIVVA 480
Query: 503 NQAAAKAVMFIAGVAVGNEYYDCVSMNDTPIKCSGNMRHLIVEACISRNLLDTSAYFWPG 562
NQAAAKAVMFI+GVAVGNEYYDCVSMNDTPI CSGNMRHLIVEACISRNLLDTSAYFWPG
Sbjct: 481 NQAAAKAVMFISGVAVGNEYYDCVSMNDTPINCSGNMRHLIVEACISRNLLDTSAYFWPG 540
Query: 563 YVNARKSQVPSSTSGQVVGWSSFMKGSSLTPSMINALVATPASSLAEIEKIYEIAENGSV 622
YVN R SQVP S S QVVGWSSFMKGSSLTPSM+NALVATPASSLAEIEKIYEIA NGS
Sbjct: 541 YVNTRSSQVPRSASSQVVGWSSFMKGSSLTPSMVNALVATPASSLAEIEKIYEIAINGSG 600
Query: 623 DEKISAASVLCGASLVRGWNIQEHIVLFIARLLSPPIPADYSGNDSYLIDYASFLNALLV 682
DEKISAAS+LCGASLVRGWN+QEH VLFI+RLLSPPIPADY G+DSYLIDYA FLN LLV
Sbjct: 601 DEKISAASILCGASLVRGWNLQEHTVLFISRLLSPPIPADYPGSDSYLIDYAPFLNVLLV 660
Query: 683 GISSVDCVQIFSLHGMVPLLAGQLMPICEAFGSSPPKSWILTSGEELTCRAVFSLAFTLL 742
GISSVDCVQIFSLHGMVPLLAGQLMPICEAFGSS PKSWILTSGEELTC AVFSLAFTLL
Sbjct: 661 GISSVDCVQIFSLHGMVPLLAGQLMPICEAFGSSTPKSWILTSGEELTCHAVFSLAFTLL 720
Query: 743 LRLWRFHHPPVENVKGDARPVGSQLTPEYLLLVRNTQLASFGQSPKDRLRAKRLSKLLKF 802
LRLWRFHHPP+ENVKGDARPVGSQLTPEYLLLVRN+QLASFG+SPKDRL+ +RLSKLLKF
Sbjct: 721 LRLWRFHHPPIENVKGDARPVGSQLTPEYLLLVRNSQLASFGKSPKDRLKVRRLSKLLKF 780
Query: 803 SVKPVYMDAFPKLKGWYRQHQECIASILPGLVPGAPVHQIVDALMIMMFKKINRGGQSLA 862
S++P +MD+FPKLKGWYRQHQECIASI PGLVPGAPVHQ VDAL+ MMFKKINRGGQSL
Sbjct: 781 SLEPTFMDSFPKLKGWYRQHQECIASIPPGLVPGAPVHQTVDALLTMMFKKINRGGQSLT 840
Query: 863 STTSGSSNTSGSASEEASIKLKVPAWDILKATPFVLDAALTACAHGRLSTRDLATGLKDL 922
STTS SSN+SGSA+EEASIKLKVPAWDIL+ATPFVLDAALTACAHGRLS RDLATGLKDL
Sbjct: 841 STTSASSNSSGSANEEASIKLKVPAWDILEATPFVLDAALTACAHGRLSPRDLATGLKDL 900
Query: 923 ADFLPATFATIVSYFSAEVTRGIWKPAFMNGTDWPSPAATLSIVEQQIKSILAATGVDVP 982
ADFLPA+FATIV YFSAEVTRGIWKPAFMNGTDWPSPAATLS+VEQQIK ILAATGVDVP
Sbjct: 901 ADFLPASFATIVCYFSAEVTRGIWKPAFMNGTDWPSPAATLSVVEQQIKKILAATGVDVP 960
Query: 983 SLAVGGTSPATLPLPLAALISLTITYKLDKASERLLALVGPALNSIAASCSWPCTPIIAS 1042
SLA+GG+ PA LPLPLAALISLTITYKLDKASERLLALVGPALNS+ A CSWPCTPIIAS
Sbjct: 961 SLALGGSFPAMLPLPLAALISLTITYKLDKASERLLALVGPALNSLVAGCSWPCTPIIAS 1020
Query: 1043 LWSQKVKRWNDFLVFSASRTVFHHNMDAVVQLLKSCFTSTLGLGNSNVFSSGGVGSLLGH 1102
LW+QKVKRWNDFLVFSASRTVFHHN DAVVQLLKSCFTSTLGLGNSNV S GGVG+LLGH
Sbjct: 1021 LWAQKVKRWNDFLVFSASRTVFHHNSDAVVQLLKSCFTSTLGLGNSNVNSGGGVGALLGH 1080
Query: 1103 GFGSNVLGGMSPVAPGILYLRVHRSMRDSLFMVEEIVSILMLSVRDIAVSGLPKEKAEKL 1162
GFGS+VLGGMSP APGILYLRVHR +RD+LF+VEEIVS+LMLSV+DIAV+GLPKEKAEKL
Sbjct: 1081 GFGSHVLGGMSPAAPGILYLRVHRCVRDALFLVEEIVSLLMLSVKDIAVTGLPKEKAEKL 1140
Query: 1163 KKAKYGMRYEQVSFASAMARVKLAASLGASLVWIFGGSGLVQSLFKETLPSWFLSVHSVE 1222
KK+K+GMR EQVSFASAMARVKLAASLGASLVWI GGSGLVQSL+KETLPSWFLSVHSV+
Sbjct: 1141 KKSKHGMRCEQVSFASAMARVKLAASLGASLVWISGGSGLVQSLYKETLPSWFLSVHSVD 1200
Query: 1223 REGVECGGMVAVLGGYALAFFSVLCGTFSWGIDSASSASKRRAKILDSHLEFLASALDGK 1282
REGVE GGMV VL GYALAFFSVLCGTFSWGIDS SSASKRRAK+LDSHLEFLASALDGK
Sbjct: 1201 REGVEYGGMVPVLRGYALAFFSVLCGTFSWGIDSISSASKRRAKLLDSHLEFLASALDGK 1260
Query: 1283 FSIGCDWGTWRAYVSGFVSLMVRCAPRWLLEVDVNLLKRLSKGLRQLNEEELALALLESG 1342
FSIGCDW TWRAYVSGFVSL+VRCAP+WLLEVD+ +LKRL KGLRQLNEEELALALLESG
Sbjct: 1261 FSIGCDWATWRAYVSGFVSLLVRCAPKWLLEVDLKVLKRLGKGLRQLNEEELALALLESG 1320
Query: 1343 GVNAMGAAAELIIEGGF 1359
G+ AMGAAAELIIEGGF
Sbjct: 1321 GLTAMGAAAELIIEGGF 1336
BLAST of Sed0026391 vs. NCBI nr
Match:
XP_022963527.1 (mediator of RNA polymerase II transcription subunit 33B-like [Cucurbita moschata])
HSP 1 Score: 2323.5 bits (6020), Expect = 0.0e+00
Identity = 1184/1337 (88.56%), Postives = 1254/1337 (93.79%), Query Frame = 0
Query: 23 MAVSDPPPGQLPVVSGLWDRVLELTKSAQAKNRDPLLWALQLSSTLDSARVSLPSLELAH 82
MAVS PPGQL ++G+WD VLELTKSAQ KN DPLLWA+QLSS+L+SA VSLPS+ELAH
Sbjct: 1 MAVSAQPPGQLQGIAGVWDTVLELTKSAQEKNSDPLLWAVQLSSSLNSASVSLPSVELAH 60
Query: 83 VLVSHICWDNHVPITWKFLDQAMTANIVPPLLVIALLSTRAIPYRKLRTAAYRLYLELLN 142
+LVSHICWDNHVPI WKFL++AMTA IVPPLLVIALLSTRAIPYRKLR AAYRLYLELL+
Sbjct: 61 LLVSHICWDNHVPIMWKFLEKAMTARIVPPLLVIALLSTRAIPYRKLRPAAYRLYLELLS 120
Query: 143 RHIFSLTLQINGPNYQRIMQTIDDVLHLSQIFGLQTCEPGLLMVELFFSIVWQLLDASLD 202
RH+FS TL++NGPNY RIMQTIDDVLHLSQIFGLQTCEPGLLMVELFFSIVW LLDASLD
Sbjct: 121 RHVFSSTLEVNGPNYPRIMQTIDDVLHLSQIFGLQTCEPGLLMVELFFSIVWHLLDASLD 180
Query: 203 DEELLVLPAEERSAWLIRPQPHDMKLDVHESLSEKRTENGERLLKINNEKAIELIGQFLQ 262
DE LL LPAEERS WLIRPQPHDM+LDVH+S EK+TEN E LLK+N KAIE+IGQFLQ
Sbjct: 181 DEGLLELPAEERSVWLIRPQPHDMELDVHDSFGEKKTENSENLLKVNTAKAIEIIGQFLQ 240
Query: 263 NKKTARILCLAQQNMPLHWAGFARRLQLLAANSVVLKNTKLITSEVLLHWTSDKHRLLSR 322
NKKTARILCLA QNMPLHWAGFA+RLQLLAANSVVL+NTKLIT EVLL WTSDKHR LS+
Sbjct: 241 NKKTARILCLAHQNMPLHWAGFAQRLQLLAANSVVLRNTKLITPEVLLQWTSDKHRFLSQ 300
Query: 323 EGETTSQLVFRDVIMASGSLFSSAGQSHGVNLSALWLPIDLFLEDAMDGSQVLATSAVER 382
EG+T SQL F DV MASGSLFSSAGQSHGVN SALWLPIDLFLEDAMDGSQVLATSAVER
Sbjct: 301 EGKTKSQLEFHDV-MASGSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVER 360
Query: 383 LICLTKSLRAVNDTSWHHTFLGLWIAALRLIQRERNPSEGPVPRLDTCLCMLLSITTLAV 442
LICL KSLRAVND SWH+TFLGLWIAALRLIQRER+PSEGPVPRLDTCLCMLLSITTLAV
Sbjct: 361 LICLIKSLRAVNDASWHNTFLGLWIAALRLIQRERDPSEGPVPRLDTCLCMLLSITTLAV 420
Query: 443 TIIIEEEECELKEE-ECSPSKSRDERQSSGKCRKGLITSLQMLGEYESLLAPPQSVIAVA 502
TIIIEEEE ELKEE ECSPSKSRDE+QSSGK R+GLITSLQMLGEYESLL PPQSVI VA
Sbjct: 421 TIIIEEEEGELKEEDECSPSKSRDEKQSSGKRRQGLITSLQMLGEYESLLTPPQSVIVVA 480
Query: 503 NQAAAKAVMFIAGVAVGNEYYDCVSMNDTPIKCSGNMRHLIVEACISRNLLDTSAYFWPG 562
NQAAAKAVMFI+GVAVGNEYYDCVSMNDTPI CSGNMRHLIVEACISRNLLDTSAYFWPG
Sbjct: 481 NQAAAKAVMFISGVAVGNEYYDCVSMNDTPINCSGNMRHLIVEACISRNLLDTSAYFWPG 540
Query: 563 YVNARKSQVPSSTSGQVVGWSSFMKGSSLTPSMINALVATPASSLAEIEKIYEIAENGSV 622
YVN R SQVP S S QVVGWSSFMKGSSLTPSM+NALVATPASSLAEIEKIYEIA NGS
Sbjct: 541 YVNTRSSQVPRSASSQVVGWSSFMKGSSLTPSMVNALVATPASSLAEIEKIYEIAINGSG 600
Query: 623 DEKISAASVLCGASLVRGWNIQEHIVLFIARLLSPPIPADYSGNDSYLIDYASFLNALLV 682
DEKISAAS+LCGASLVRGWN+QEH VLFI+RLLSPPIPADY G+DSYLIDYA FLN LLV
Sbjct: 601 DEKISAASILCGASLVRGWNLQEHTVLFISRLLSPPIPADYPGSDSYLIDYAPFLNVLLV 660
Query: 683 GISSVDCVQIFSLHGMVPLLAGQLMPICEAFGSSPPKSWILTSGEELTCRAVFSLAFTLL 742
GISSVDCVQIFSLHGMVPLLAGQLMPICEAFGSS PKSWILTSGEELTC AVFSLAFTLL
Sbjct: 661 GISSVDCVQIFSLHGMVPLLAGQLMPICEAFGSSTPKSWILTSGEELTCHAVFSLAFTLL 720
Query: 743 LRLWRFHHPPVENVKGDARPVGSQLTPEYLLLVRNTQLASFGQSPKDRLRAKRLSKLLKF 802
LRLWRFHHPP+ENVKGDARPVGSQLTPEYLLLVRN+QLASFG+SPKDRL+ +RLSKLLKF
Sbjct: 721 LRLWRFHHPPIENVKGDARPVGSQLTPEYLLLVRNSQLASFGKSPKDRLKVRRLSKLLKF 780
Query: 803 SVKPVYMDAFPKLKGWYRQHQECIASILPGLVPGAPVHQIVDALMIMMFKKINRGGQSLA 862
S++P +MD+FPKLKGWYRQHQECIASI PGLVPGAPVHQ VDAL+ MMFKKINRGGQSL
Sbjct: 781 SLEPTFMDSFPKLKGWYRQHQECIASIPPGLVPGAPVHQTVDALLTMMFKKINRGGQSLT 840
Query: 863 STTSGSSNTSGSASEEASIKLKVPAWDILKATPFVLDAALTACAHGRLSTRDLATGLKDL 922
STTS SSN+SGSA+EEASIKLKVPAWDIL+ATPFVLDAALTACAHGRLS RDLATGLKDL
Sbjct: 841 STTSASSNSSGSANEEASIKLKVPAWDILEATPFVLDAALTACAHGRLSPRDLATGLKDL 900
Query: 923 ADFLPATFATIVSYFSAEVTRGIWKPAFMNGTDWPSPAATLSIVEQQIKSILAATGVDVP 982
ADFLPA+FATIV YFSAEVTRGIWKPAFMNGTDWPSPAATLS+VEQQIK ILAATGVDVP
Sbjct: 901 ADFLPASFATIVCYFSAEVTRGIWKPAFMNGTDWPSPAATLSVVEQQIKKILAATGVDVP 960
Query: 983 SLAVGGTSPATLPLPLAALISLTITYKLDKASERLLALVGPALNSIAASCSWPCTPIIAS 1042
SLA+GG+ PA LPLPLAALISLTITYKLDKASERLLALVGPALNS+ A CSWPCTPIIAS
Sbjct: 961 SLALGGSFPAMLPLPLAALISLTITYKLDKASERLLALVGPALNSLVAGCSWPCTPIIAS 1020
Query: 1043 LWSQKVKRWNDFLVFSASRTVFHHNMDAVVQLLKSCFTSTLGLGNSNVFSSGGVGSLLGH 1102
LW+QKVKRWNDFLVFSASRTVFHHN DAVVQLLKSCFTSTLGLGNSNV S GGVG+LLGH
Sbjct: 1021 LWAQKVKRWNDFLVFSASRTVFHHNSDAVVQLLKSCFTSTLGLGNSNVNSGGGVGALLGH 1080
Query: 1103 GFGSNVLGGMSPVAPGILYLRVHRSMRDSLFMVEEIVSILMLSVRDIAVSGLPKEKAEKL 1162
GFGS+VLGGMSP APGILYLRVHR +RD+LF+VEEIVS+LMLSV+DIAV+GLPKEKAEKL
Sbjct: 1081 GFGSHVLGGMSPAAPGILYLRVHRCVRDALFLVEEIVSLLMLSVKDIAVTGLPKEKAEKL 1140
Query: 1163 KKAKYGMRYEQVSFASAMARVKLAASLGASLVWIFGGSGLVQSLFKETLPSWFLSVHSVE 1222
KK+K+GMR EQVSFASAMARVKLAASLGASLVWI GGSGLVQSL+KETLPSWFLSVHSV+
Sbjct: 1141 KKSKHGMRCEQVSFASAMARVKLAASLGASLVWISGGSGLVQSLYKETLPSWFLSVHSVD 1200
Query: 1223 REGVECGGMVAVLGGYALAFFSVLCGTFSWGIDSASSASKRRAKILDSHLEFLASALDGK 1282
REGVE GGMV VL GYALAFFSVLCGTFSWGIDS SSASKRRAK+LDSHLEFLASALDGK
Sbjct: 1201 REGVEYGGMVPVLRGYALAFFSVLCGTFSWGIDSISSASKRRAKLLDSHLEFLASALDGK 1260
Query: 1283 FSIGCDWGTWRAYVSGFVSLMVRCAPRWLLEVDVNLLKRLSKGLRQLNEEELALALLESG 1342
FSIGCDW TWRAYVSGFVSL+VRCAP+WLLEVD+ +LKRL KGLRQLNEEELALALLESG
Sbjct: 1261 FSIGCDWATWRAYVSGFVSLLVRCAPKWLLEVDLKVLKRLGKGLRQLNEEELALALLESG 1320
Query: 1343 GVNAMGAAAELIIEGGF 1359
G+ AMGAAAELII GGF
Sbjct: 1321 GLTAMGAAAELIIGGGF 1336
BLAST of Sed0026391 vs. ExPASy Swiss-Prot
Match:
Q9LUG9 (Mediator of RNA polymerase II transcription subunit 33A OS=Arabidopsis thaliana OX=3702 GN=MED33A PE=1 SV=1)
HSP 1 Score: 1457.2 bits (3771), Expect = 0.0e+00
Identity = 767/1319 (58.15%), Postives = 973/1319 (73.77%), Query Frame = 0
Query: 39 LWDRVLELTKSAQAKNRDPLLWALQLSSTLDSARVSLPSLELAHVLVSHICWDNHVPITW 98
+WD V+ELTK AQ DP LWA QLSS L V LPS ELA V+VS+ICWDN+VPI W
Sbjct: 9 VWDCVIELTKMAQENCVDPRLWASQLSSNLKFFAVELPSTELAEVIVSYICWDNNVPIVW 68
Query: 99 KFLDQAMTANIVPPLLVIALLSTRAIPYRKLRTAAYRLYLELLNRHIFSLTLQINGPNYQ 158
KFL++AM +V PL+V+ALL+ R +P R + AAYR+YLELL R++F++ I+GP+YQ
Sbjct: 69 KFLERAMALKLVSPLVVLALLADRVVPTRSTQQAAYRIYLELLKRNMFTIKDHISGPHYQ 128
Query: 159 RIMQTIDDVLHLSQIFGLQTCEPGLLMVELFFSIVWQLLDASLDDEELLVLPAEERSAWL 218
++M ++ ++L LS++F L T +PG+L+VE F +V QLLDA+L DE LL L + S WL
Sbjct: 129 KVMISVSNILRLSELFDLDTSKPGVLLVEFVFKMVSQLLDAALSDEGLLELSQDSSSQWL 188
Query: 219 IRPQPHDMKLDVHESLSEKRTENGERLLKINNEKAIELIGQFLQNKKTARILCLAQQNMP 278
++ Q DM++D E +EK T + E+L +N AIELI +FL+N AR+L L N
Sbjct: 189 VKSQ--DMEIDAPERYNEK-TGSLEKLQSLNTIMAIELIAEFLRNTVIARLLYLVSSNRA 248
Query: 279 LHWAGFARRLQLLAANSVVLKNTKLITSEVLLHWTSDKHRLLSREGETTSQLVFRDVIMA 338
W F +++QLL NS LK++K++ S LL S++ S + + TS + I+
Sbjct: 249 SKWHEFVQKVQLLGENSSALKHSKVLNSGDLLQLISNRRFGYSYDSKVTSARK-SNAIVD 308
Query: 339 SGSLFSSAGQSHGVNLSALWLPIDLFLEDAMDGSQVLATSAVERLICLTKSLRAVNDTSW 398
GSL S AG HG +LS+LWLP+DL EDAMDG QV TSA+E + L K+L+ +N ++W
Sbjct: 309 FGSLSSYAGLCHGASLSSLWLPLDLVFEDAMDGYQVNPTSAIEIITGLAKTLKEINGSTW 368
Query: 399 HHTFLGLWIAALRLIQRERNPSEGPVPRLDTCLCMLLSITTLAVTIIIEEEECELKEEEC 458
H TFLGLWIAALRL+QRER+P EGP+PRLDT LCM L I L V +IEE + E E
Sbjct: 369 HDTFLGLWIAALRLVQRERDPIEGPIPRLDTRLCMSLCIVPLVVANLIEEGKYESVME-- 428
Query: 459 SPSKSRDERQSSGKCRKGLITSLQMLGEYESLLAPPQSVIAVANQAAAKAVMFIAGVAVG 518
K R L+TSLQ+LG++ LLAPP+ V++ AN+AA KA++F++G VG
Sbjct: 429 -------------KLRDDLVTSLQVLGDFPGLLAPPKCVVSAANKAATKAILFLSGGNVG 488
Query: 519 NEYYDCVSMNDTPIKCSGNMRHLIVEACISRNLLDTSAYFWPGYVNARKSQVPSSTSGQV 578
+D ++M D P+ CSGNMRHLIVEACI+RN+LD SAY WPGYVN R +Q+P S +V
Sbjct: 489 KSCFDVINMKDMPVNCSGNMRHLIVEACIARNILDMSAYSWPGYVNGRINQIPQSLPNEV 548
Query: 579 VGWSSFMKGSSLTPSMINALVATPASSLAEIEKIYEIAENGSVDEKISAASVLCGASLVR 638
WSSF+KG+ L +M+N LV+ PASSLAE+EK++E+A GS DEKISAA+VLCGASL R
Sbjct: 549 PCWSSFVKGAPLNAAMVNTLVSVPASSLAELEKLFEVAVKGSDDEKISAATVLCGASLTR 608
Query: 639 GWNIQEHIVLFIARLLSPPIPADYSGNDSYLIDYASFLNALLVGISSVDCVQIFSLHGMV 698
GWNIQEH V ++ RLLSPP+PADYS +++LI YA LN ++VGI SVD +QIFSLHGMV
Sbjct: 609 GWNIQEHTVEYLTRLLSPPVPADYSRAENHLIGYACMLNVVIVGIGSVDSIQIFSLHGMV 668
Query: 699 PLLAGQLMPICEAFGS-SPPKSWILTSGEELTCRAVFSLAFTLLLRLWRFHHPPVENVKG 758
P LA LMPICE FGS +P SW L SGE ++ +VFS AFTLLL+LWRF+HPP+E+ G
Sbjct: 669 PQLACSLMPICEEFGSYTPSVSWTLPSGEAISAYSVFSNAFTLLLKLWRFNHPPIEHGVG 728
Query: 759 DARPVGSQLTPEYLLLVRNTQLASFGQSPKDRLRAKRLSKLLK-FSVKPVYMDAFPKLKG 818
D VGSQLTPE+LL VRN+ L S +DR R KRLS++ + S +PV++D+FPKLK
Sbjct: 729 DVPTVGSQLTPEHLLSVRNSYLVSSEILDRDRNR-KRLSEVARAASCQPVFVDSFPKLKV 788
Query: 819 WYRQHQECIASILPGLVPGAPVHQIVDALMIMMFKKINRGGQSLASTTSGSSNTSGSASE 878
WYRQHQ CIA+ L GL G+PVHQ V+AL+ M F K+ RG Q+L SG+S++SG+ASE
Sbjct: 789 WYRQHQRCIAATLSGLTHGSPVHQTVEALLNMTFGKV-RGSQTLNPVNSGTSSSSGAASE 848
Query: 879 EASIKLKVPAWDILKATPFVLDAALTACAHGRLSTRDLATGLKDLADFLPATFATIVSYF 938
+++I+ + PAWDILKA P+V+DAALTAC HGRLS R LATGLKDLADFLPA+ ATIVSYF
Sbjct: 849 DSNIRPEFPAWDILKAVPYVVDAALTACTHGRLSPRQLATGLKDLADFLPASLATIVSYF 908
Query: 939 SAEVTRGIWKPAFMNGTDWPSPAATLSIVEQQIKSILAATGVDVPSLAVGGTSPATLPLP 998
SAEV+RG+WKP FMNG DWPSPA LS VE+ I ILA TGVD+PSLA GG+SPATLPLP
Sbjct: 909 SAEVSRGVWKPVFMNGVDWPSPATNLSTVEEYITKILATTGVDIPSLAPGGSSPATLPLP 968
Query: 999 LAALISLTITYKLDKASERLLALVGPALNSIAASCSWPCTPIIASLWSQKVKRWNDFLVF 1058
LAA +SLTITYK+DKASER L L GPAL +AA C WPC PI+ASLW+QK KRW DFLVF
Sbjct: 969 LAAFVSLTITYKIDKASERFLNLAGPALECLAAGCPWPCMPIVASLWTQKAKRWFDFLVF 1028
Query: 1059 SASRTVFHHNMDAVVQLLKSCFTSTLGLGNSNVFSSGGVGSLLGHGFGSNVLGGMSPVAP 1118
SASRTVF HN DAV+QLL++CF++TLGL + + + GGVG+LLGHGFGS+ GG+SPVAP
Sbjct: 1029 SASRTVFLHNQDAVIQLLRNCFSATLGLNAAPMSNDGGVGALLGHGFGSHFYGGISPVAP 1088
Query: 1119 GILYLRVHRSMRDSLFMVEEIVSILMLSVRDIAVSGLPKEKAEKLKKAKYGMRYEQVSFA 1178
GILYLR++R++RD++ + EEI+S+L+ SV DIA + L KEK EKLK K G RY Q S A
Sbjct: 1089 GILYLRMYRALRDTVSVSEEILSLLIHSVEDIAQNRLSKEKLEKLKTVKNGSRYGQSSLA 1148
Query: 1179 SAMARVKLAASLGASLVWIFGGSGLVQSLFKETLPSWFLSVHSVEREGVECGGMVAVLGG 1238
+AM +VKLAASL ASLVW+ GG G+V L KET+PSWFLS +RE +VA L G
Sbjct: 1149 TAMTQVKLAASLSASLVWLTGGLGVVHVLIKETIPSWFLSTDKSDREQGP-SDLVAELRG 1208
Query: 1239 YALAFFSVLCGTFSWGIDSASSASKRRAK-ILDSHLEFLASALDGKFSIGCDWGTWRAYV 1298
+ALA+F VLCG +WG+DS SSASKRR + IL SHLEF+ASALDGK S+GC+ TWR Y+
Sbjct: 1209 HALAYFVVLCGALTWGVDSRSSASKRRRQAILGSHLEFIASALDGKISVGCETATWRTYI 1268
Query: 1299 SGFVSLMVRCAPRWLLEVDVNLLKRLSKGLRQLNEEELALALLESGGVNAMGAAAELII 1355
SG VSLMV C P W+ E+D +LK LS GLR+ ++ELA+ LL GG+ M AA+ II
Sbjct: 1269 SGLVSLMVSCLPLWVTEIDTEVLKSLSNGLRKWGKDELAIVLLSLGGLKTMDYAADFII 1305
BLAST of Sed0026391 vs. ExPASy Swiss-Prot
Match:
F4IN69 (Mediator of RNA polymerase II transcription subunit 33B OS=Arabidopsis thaliana OX=3702 GN=MED33B PE=1 SV=1)
HSP 1 Score: 1446.4 bits (3743), Expect = 0.0e+00
Identity = 790/1340 (58.96%), Postives = 953/1340 (71.12%), Query Frame = 0
Query: 39 LWDRVLELTKSAQAKNRDPLLWALQLSSTLDSARVSLPSLELAHVLVSHICWDNHVPITW 98
LW+ V L +SAQ KN DPL WALQL TL SA +SLPS +LA LV+HI W+NH P++W
Sbjct: 10 LWESVTSLIRSAQEKNVDPLHWALQLRLTLASAGISLPSPDLAQFLVTHIFWENHSPLSW 69
Query: 99 KFLDQAMTANIVPPLLVIALLSTRAIPYRKLRTAAYRLYLELLNRHIFSLTLQINGPNYQ 158
K L++A++ NIVPPLLV+ALLS R IP RKL AAYRLY+ELL RH FS I P Y
Sbjct: 70 KLLEKAISVNIVPPLLVLALLSPRVIPNRKLHPAAYRLYMELLKRHAFSFMPLIRAPGYH 129
Query: 159 RIMQTIDDVLHLSQIFGLQTCEPGLLMVELFFSIVWQLLDASLDDEELLVLPAEERSAWL 218
+ M +IDD+LHLS+ FG+Q EPG +++ FSIVW+LLDASLD+E LL L + +RS W
Sbjct: 130 KTMNSIDDILHLSETFGVQDQEPGSILLAFVFSIVWELLDASLDEEGLLELTSNKRSKW- 189
Query: 219 IRPQPHDMKLDVHESLSEKRTENGERLLKINNEKAIELIGQFLQNKKTARILCLAQQNMP 278
PHDM LD E+ S KR EN + L K N E AIELI +FLQNK T+RIL LA QNM
Sbjct: 190 -PSSPHDMDLDGLEN-SVKRNENHDALEKANTEMAIELIQEFLQNKVTSRILHLASQNM- 249
Query: 279 LHWAGFARRLQLLAANSVVLKNTKLITSEVLLHWTSDKHRLLSREGETTSQLVFRDVIMA 338
E +T + F I++
Sbjct: 250 --------------------------------------------ESKTIPRGEFH-AIVS 309
Query: 339 SGSLFSSAGQSHGVNLSALWLPIDLFLEDAMDGSQVLATSAVERLICLTKSLRAVNDTSW 398
SGS + SALWLPIDLF ED MDG+Q A SAVE L L K+L+A N TSW
Sbjct: 310 SGSKLALTSD------SALWLPIDLFFEDIMDGTQAAAASAVENLTGLVKALQAANSTSW 369
Query: 399 HHTFLGLWIAALRLIQR-------------------ERNPSEGPVPRLDTCLCMLLSITT 458
H FL LW+AALRL+QR ER+P EGPVPR DT LC+LLS+T
Sbjct: 370 HDAFLALWLAALRLVQRENLCLRYCFFMHMLEILSEERDPIEGPVPRTDTFLCVLLSVTP 429
Query: 459 LAVTIIIEEEECELKEEECSPSKSRDERQSSGKCRKGLITSLQMLGEYESLLAPPQSVIA 518
LAV IIEEEE + ++ S S S ++ GKCR+GLI SLQ LG+YESLL PP+SV +
Sbjct: 430 LAVANIIEEEESQW-IDQTSSSPSNQWKEKKGKCRQGLINSLQQLGDYESLLTPPRSVQS 489
Query: 519 VANQAAAKAVMFIAGVAVGNEYYDCVSMNDTPIKCSGNMRHLIVEACISRNLLDTSAYFW 578
VANQAAAKA+MFI+G+ N Y+ SM+++ C C R L T F
Sbjct: 490 VANQAAAKAIMFISGITNSNGSYENTSMSESASGC-----------CKVRFSLFTLKMFV 549
Query: 579 PGYVNARKSQVPSSTSGQVVGWSSFMKGSSLTPSMINALVATPASSLAEIEKIYEIAENG 638
V + + WS MKGS LTPS+ N+L+ TPASSLAEIEK+YE+A G
Sbjct: 550 VMGVYLLCN---------ISCWSLVMKGSPLTPSLTNSLITTPASSLAEIEKMYEVATTG 609
Query: 639 SVDEKISAASVLCGASLVRGWNIQEHIVLFIARLLSPPIPADYSGNDSYLIDYASFLNAL 698
S DEKI+ AS+LCGASL RGW+IQEH+++FI LLSPP PAD SG+ S+LI+ A FLN L
Sbjct: 610 SEDEKIAVASILCGASLFRGWSIQEHVIIFIVTLLSPPAPADLSGSYSHLINSAPFLNVL 669
Query: 699 LVGISSVDCVQIFSLHGMVPLLAGQLMPICEAFGSSPPK-SWILTSGEELTCRAVFSLAF 758
LVGIS +DCV IFSLHG+VPLLAG LMPICEAFGS P +W L +GE ++ AVFS AF
Sbjct: 670 LVGISPIDCVHIFSLHGVVPLLAGALMPICEAFGSGVPNITWTLPTGELISSHAVFSTAF 729
Query: 759 TLLLRLWRFHHPPVENVKGDARPVGSQLTPEYLLLVRNTQLASFGQSPKDRLRAKRLSKL 818
TLLLRLWRF HPP++ V GD PVG Q +PEYLLLVRN +L FG+SPKDR+ +R SK+
Sbjct: 730 TLLLRLWRFDHPPLDYVLGDVPPVGPQPSPEYLLLVRNCRLECFGKSPKDRMARRRFSKV 789
Query: 819 LKFSVKPVYMDAFPKLKGWYRQHQECIASILPGLVPGAPVHQIVDALMIMMFKKINRGGQ 878
+ SV P++MD+FP+LK WYRQHQEC+ASIL L G+PVH IVD+L+ MMFKK N+GG
Sbjct: 790 IDISVDPIFMDSFPRLKQWYRQHQECMASILSELKTGSPVHHIVDSLLSMMFKKANKGGS 849
Query: 879 SLASTTSGSSNTSGSASEEASIKLKVPAWDILKATPFVLDAALTACAHGRLSTRDLATGL 938
+ +SGSS+ S S +++S +LK+PAWDIL+A PFVLDAALTACAHG LS R+LATGL
Sbjct: 850 QSLTPSSGSSSLSTSGGDDSSDQLKLPAWDILEAAPFVLDAALTACAHGSLSPRELATGL 909
Query: 939 KDLADFLPATFATIVSYFSAEVTRGIWKPAFMNGTDWPSPAATLSIVEQQIKSILAATGV 998
K LADFLPAT T+VSYFS+EVTRG+WKP MNGTDWPSPAA L+ VEQQI+ ILAATGV
Sbjct: 910 KILADFLPATLGTMVSYFSSEVTRGLWKPVSMNGTDWPSPAANLASVEQQIEKILAATGV 969
Query: 999 DVPSLAVGGTSPATLPLPLAALISLTITYKLDKASERLLALVGPALNSIAASCSWPCTPI 1058
DVP L G S ATLPLPLAAL+SLTITYKLDKA+ER L LVGPAL+S+AA+C WPC PI
Sbjct: 970 DVPRLPADGISAATLPLPLAALVSLTITYKLDKATERFLVLVGPALDSLAAACPWPCMPI 1029
Query: 1059 IASLWSQKVKRWNDFLVFSASRTVFHHNMDAVVQLLKSCFTSTLGL-GNSNVFSSGGVGS 1118
+ SLW+QKVKRW+DFL+FSASRTVFHHN DAV+QLL+SCFT TLGL S + S GGVG+
Sbjct: 1030 VTSLWTQKVKRWSDFLIFSASRTVFHHNRDAVIQLLRSCFTCTLGLTPTSQLCSYGGVGA 1089
Query: 1119 LLGHGFGSNVLGGMSPVAPGILYLRVHRSMRDSLFMVEEIVSILMLSVRDIAVSGLPKEK 1178
LLGHGFGS GG+S APGILY++VHRS+RD +F+ EEI+S+LM SV+ IA LP +
Sbjct: 1090 LLGHGFGSRYSGGISTAAPGILYIKVHRSIRDVMFLTEEILSLLMFSVKSIATRELPAGQ 1149
Query: 1179 AEKLKKAKYGMRY--EQVSFASAMARVKLAASLGASLVWIFGGSGLVQSLFKETLPSWFL 1238
AEKLKK K G RY QVS + AM RVKLAASLGASLVWI GG LVQ+L KETLPSWF+
Sbjct: 1150 AEKLKKTKDGSRYGIGQVSLSLAMRRVKLAASLGASLVWISGGLNLVQALIKETLPSWFI 1209
Query: 1239 SVHSVEREGVECGGMVAVLGGYALAFFSVLCGTFSWGIDSASSASKRRAKILDSHLEFLA 1298
SVH E E GGMV +L GYALA+F++L F+WG+DS+ ASKRR ++L HLEF+
Sbjct: 1210 SVHGEED---ELGGMVPMLRGYALAYFAILSSAFAWGVDSSYPASKRRPRVLWLHLEFMV 1269
Query: 1299 SALDGKFSIGCDWGTWRAYVSGFVSLMVRCAPRWLLEVDVNLLKRLSKGLRQLNEEELAL 1356
SAL+GK S+GCDW TW+AYV+GFVSLMV+C P W+LEVDV ++KRLSK LRQ NE++LAL
Sbjct: 1270 SALEGKISLGCDWATWQAYVTGFVSLMVQCTPAWVLEVDVEVIKRLSKSLRQWNEQDLAL 1270
BLAST of Sed0026391 vs. ExPASy TrEMBL
Match:
A0A6J1DPP9 (mediator of RNA polymerase II transcription subunit 33B-like OS=Momordica charantia OX=3673 GN=LOC111022676 PE=4 SV=1)
HSP 1 Score: 2330.1 bits (6037), Expect = 0.0e+00
Identity = 1190/1337 (89.01%), Postives = 1261/1337 (94.32%), Query Frame = 0
Query: 23 MAVSDPPPGQLPVVSGLWDRVLELTKSAQAKNRDPLLWALQLSSTLDSARVSLPSLELAH 82
M VS PP QL ++GLWD VLELTKSAQ KN DPLLWA+QLSS+L+SA VSLPS+ELA
Sbjct: 1 MVVSVQPPSQLQGMAGLWDSVLELTKSAQDKNCDPLLWAVQLSSSLNSAGVSLPSIELAQ 60
Query: 83 VLVSHICWDNHVPITWKFLDQAMTANIVPPLLVIALLSTRAIPYRKLRTAAYRLYLELLN 142
+LVSHICWDNHVPI WKFL++AMTA IVPPLLV+ALLSTRAIPYRKLR AAYRLYLELL+
Sbjct: 61 LLVSHICWDNHVPIMWKFLEKAMTAKIVPPLLVVALLSTRAIPYRKLRPAAYRLYLELLS 120
Query: 143 RHIFSLTLQINGPNYQRIMQTIDDVLHLSQIFGLQTCEPGLLMVELFFSIVWQLLDASLD 202
RH+FS T QINGPNYQRIMQTIDDVLHLSQIF LQ CEPGLLMVELFFSIVWQLLDASLD
Sbjct: 121 RHVFSSTSQINGPNYQRIMQTIDDVLHLSQIFSLQACEPGLLMVELFFSIVWQLLDASLD 180
Query: 203 DEELLVLPAEERSAWLIRPQPHDMKLDVHESLSEKRTENGERLLKINNEKAIELIGQFLQ 262
DE LLVLPAEERSAWLIRPQPHDM+LDVH+S SEKRTEN E LLK+N KAIE+IGQFLQ
Sbjct: 181 DEGLLVLPAEERSAWLIRPQPHDMELDVHDSFSEKRTENSESLLKVNTAKAIEIIGQFLQ 240
Query: 263 NKKTARILCLAQQNMPLHWAGFARRLQLLAANSVVLKNTKLITSEVLLHWTSDKHRLLSR 322
NKKTARIL LA +NMPLHWAGFA+RLQLLAANS VL+NTKLIT EVLLHWTSDKHRLLSR
Sbjct: 241 NKKTARILYLAHRNMPLHWAGFAQRLQLLAANSAVLRNTKLITPEVLLHWTSDKHRLLSR 300
Query: 323 EGETTSQLVFRDVIMASGSLFSSAGQSHGVNLSALWLPIDLFLEDAMDGSQVLATSAVER 382
EG+ TSQ FR+V MASGSLFSSAGQSHGVN S LWLPIDLFLEDAMDGSQVLATSAVER
Sbjct: 301 EGK-TSQQEFRNV-MASGSLFSSAGQSHGVNWSTLWLPIDLFLEDAMDGSQVLATSAVER 360
Query: 383 LICLTKSLRAVNDTSWHHTFLGLWIAALRLIQRERNPSEGPVPRLDTCLCMLLSITTLAV 442
LICL KSL+AVNDTSWH+TF+GLWIAALRLIQRER+PSEGPVPRLDTCLCMLLSITTLAV
Sbjct: 361 LICLIKSLQAVNDTSWHNTFMGLWIAALRLIQRERDPSEGPVPRLDTCLCMLLSITTLAV 420
Query: 443 TIIIEEEECELKEE-ECSPSKSRDERQSSGKCRKGLITSLQMLGEYESLLAPPQSVIAVA 502
TIIIEE+E ELKEE ECSPSK RDE++ SGKCRKGLITSLQMLGEYE LL PPQSV A+A
Sbjct: 421 TIIIEEDEGELKEEDECSPSKGRDEKKCSGKCRKGLITSLQMLGEYEGLLTPPQSVTAIA 480
Query: 503 NQAAAKAVMFIAGVAVGNEYYDCVSMNDTPIKCSGNMRHLIVEACISRNLLDTSAYFWPG 562
NQAAAKAVMFI+GVAVGNEYYDCVSMNDTP+ CSGNMRHLIVEACISRNLLDTS YFWPG
Sbjct: 481 NQAAAKAVMFISGVAVGNEYYDCVSMNDTPVNCSGNMRHLIVEACISRNLLDTSVYFWPG 540
Query: 563 YVNARKSQVPSSTSGQVVGWSSFMKGSSLTPSMINALVATPASSLAEIEKIYEIAENGSV 622
YVNAR SQVP S SGQVVGWSSFMKGSSLT SM++ALVATPASSLAEIEKIYEIA NGS
Sbjct: 541 YVNARSSQVPRSASGQVVGWSSFMKGSSLTLSMVDALVATPASSLAEIEKIYEIAVNGSG 600
Query: 623 DEKISAASVLCGASLVRGWNIQEHIVLFIARLLSPPIPADYSGNDSYLIDYASFLNALLV 682
DEKISAAS+LCG SLVRGWN+QEH VLFIARLLSPPIPADYSG+DSYLIDYA FLN LLV
Sbjct: 601 DEKISAASILCGESLVRGWNLQEHTVLFIARLLSPPIPADYSGSDSYLIDYAPFLNVLLV 660
Query: 683 GISSVDCVQIFSLHGMVPLLAGQLMPICEAFGSSPPKSWILTSGEELTCRAVFSLAFTLL 742
GISSVDCVQIFSLHGMVPLLAGQLMPICEAFG SPPKSW+LTSGEELTC AVFSLAFTLL
Sbjct: 661 GISSVDCVQIFSLHGMVPLLAGQLMPICEAFGLSPPKSWVLTSGEELTCHAVFSLAFTLL 720
Query: 743 LRLWRFHHPPVENVKGDARPVGSQLTPEYLLLVRNTQLASFGQSPKDRLRAKRLSKLLKF 802
LRLWRFHHPPVENVK DARPVGSQLTPEYLLLVRN+QLASFG+SPKDR + +RLSKLLKF
Sbjct: 721 LRLWRFHHPPVENVKRDARPVGSQLTPEYLLLVRNSQLASFGKSPKDRFKVRRLSKLLKF 780
Query: 803 SVKPVYMDAFPKLKGWYRQHQECIASILPGLVPGAPVHQIVDALMIMMFKKINRGGQSLA 862
S++P++MD+FPKLKGWYRQHQECIASIL GLVPGAPVHQIVDAL+ MMF+KINRGG SL
Sbjct: 781 SLEPIFMDSFPKLKGWYRQHQECIASILSGLVPGAPVHQIVDALLTMMFRKINRGGHSLT 840
Query: 863 STTSGSSNTSGSASEEASIKLKVPAWDILKATPFVLDAALTACAHGRLSTRDLATGLKDL 922
STTSGSSN+SGSA+EEASIKLKVPAWDIL+ATPFVLDAALTACAHGRLS RDLATGLKDL
Sbjct: 841 STTSGSSNSSGSANEEASIKLKVPAWDILEATPFVLDAALTACAHGRLSPRDLATGLKDL 900
Query: 923 ADFLPATFATIVSYFSAEVTRGIWKPAFMNGTDWPSPAATLSIVEQQIKSILAATGVDVP 982
ADFLPA+FATIVSYFSAEVTRGIWKPAFMNGTDWPSPAATLSIVEQQIK ILAATGVDVP
Sbjct: 901 ADFLPASFATIVSYFSAEVTRGIWKPAFMNGTDWPSPAATLSIVEQQIKKILAATGVDVP 960
Query: 983 SLAVGGTSPATLPLPLAALISLTITYKLDKASERLLALVGPALNSIAASCSWPCTPIIAS 1042
SLAVGG SPA LPLPLAALISLTITYKLDKASERLLALVGPALN++AASCSWPCTPIIAS
Sbjct: 961 SLAVGGNSPAMLPLPLAALISLTITYKLDKASERLLALVGPALNTLAASCSWPCTPIIAS 1020
Query: 1043 LWSQKVKRWNDFLVFSASRTVFHHNMDAVVQLLKSCFTSTLGLGNSNVFSSGGVGSLLGH 1102
LW+QKVKRWNDFLVFSASRTVFHHN DAVVQLLKSCFTSTLGLGNSN+ S+GGVG+LLGH
Sbjct: 1021 LWAQKVKRWNDFLVFSASRTVFHHNSDAVVQLLKSCFTSTLGLGNSNLNSNGGVGTLLGH 1080
Query: 1103 GFGSNVLGGMSPVAPGILYLRVHRSMRDSLFMVEEIVSILMLSVRDIAVSGLPKEKAEKL 1162
GFGS+VLGGMSPVAPGILYLRVHRS+RD+LFMVEEIVS+LMLSVRDIAVSGLP+EKAEKL
Sbjct: 1081 GFGSHVLGGMSPVAPGILYLRVHRSVRDALFMVEEIVSLLMLSVRDIAVSGLPREKAEKL 1140
Query: 1163 KKAKYGMRYEQVSFASAMARVKLAASLGASLVWIFGGSGLVQSLFKETLPSWFLSVHSVE 1222
KK K+GMRYEQVSFASAM+RVKLAASLGASLVWI GGSGLVQSLFKETLPSWFLSVHS+E
Sbjct: 1141 KKTKHGMRYEQVSFASAMSRVKLAASLGASLVWISGGSGLVQSLFKETLPSWFLSVHSLE 1200
Query: 1223 REGVECGGMVAVLGGYALAFFSVLCGTFSWGIDSASSASKRRAKILDSHLEFLASALDGK 1282
REGVE GGMVAVLGGYALAFFSVLCGTFSWGIDS SSASKRRAKILDSHLEFLASALDGK
Sbjct: 1201 REGVEYGGMVAVLGGYALAFFSVLCGTFSWGIDSVSSASKRRAKILDSHLEFLASALDGK 1260
Query: 1283 FSIGCDWGTWRAYVSGFVSLMVRCAPRWLLEVDVNLLKRLSKGLRQLNEEELALALLESG 1342
FSIGCDW TWRAYVSGFVSLMVRCAP+W++EVDVN+LKRLS GLRQL+EEELALALLESG
Sbjct: 1261 FSIGCDWATWRAYVSGFVSLMVRCAPKWVVEVDVNILKRLSNGLRQLSEEELALALLESG 1320
Query: 1343 GVNAMGAAAELIIEGGF 1359
GV AMGAAAELIIEGGF
Sbjct: 1321 GVTAMGAAAELIIEGGF 1335
BLAST of Sed0026391 vs. ExPASy TrEMBL
Match:
A0A6J1HFH4 (mediator of RNA polymerase II transcription subunit 33B-like OS=Cucurbita moschata OX=3662 GN=LOC111463830 PE=4 SV=1)
HSP 1 Score: 2323.5 bits (6020), Expect = 0.0e+00
Identity = 1184/1337 (88.56%), Postives = 1254/1337 (93.79%), Query Frame = 0
Query: 23 MAVSDPPPGQLPVVSGLWDRVLELTKSAQAKNRDPLLWALQLSSTLDSARVSLPSLELAH 82
MAVS PPGQL ++G+WD VLELTKSAQ KN DPLLWA+QLSS+L+SA VSLPS+ELAH
Sbjct: 1 MAVSAQPPGQLQGIAGVWDTVLELTKSAQEKNSDPLLWAVQLSSSLNSASVSLPSVELAH 60
Query: 83 VLVSHICWDNHVPITWKFLDQAMTANIVPPLLVIALLSTRAIPYRKLRTAAYRLYLELLN 142
+LVSHICWDNHVPI WKFL++AMTA IVPPLLVIALLSTRAIPYRKLR AAYRLYLELL+
Sbjct: 61 LLVSHICWDNHVPIMWKFLEKAMTARIVPPLLVIALLSTRAIPYRKLRPAAYRLYLELLS 120
Query: 143 RHIFSLTLQINGPNYQRIMQTIDDVLHLSQIFGLQTCEPGLLMVELFFSIVWQLLDASLD 202
RH+FS TL++NGPNY RIMQTIDDVLHLSQIFGLQTCEPGLLMVELFFSIVW LLDASLD
Sbjct: 121 RHVFSSTLEVNGPNYPRIMQTIDDVLHLSQIFGLQTCEPGLLMVELFFSIVWHLLDASLD 180
Query: 203 DEELLVLPAEERSAWLIRPQPHDMKLDVHESLSEKRTENGERLLKINNEKAIELIGQFLQ 262
DE LL LPAEERS WLIRPQPHDM+LDVH+S EK+TEN E LLK+N KAIE+IGQFLQ
Sbjct: 181 DEGLLELPAEERSVWLIRPQPHDMELDVHDSFGEKKTENSENLLKVNTAKAIEIIGQFLQ 240
Query: 263 NKKTARILCLAQQNMPLHWAGFARRLQLLAANSVVLKNTKLITSEVLLHWTSDKHRLLSR 322
NKKTARILCLA QNMPLHWAGFA+RLQLLAANSVVL+NTKLIT EVLL WTSDKHR LS+
Sbjct: 241 NKKTARILCLAHQNMPLHWAGFAQRLQLLAANSVVLRNTKLITPEVLLQWTSDKHRFLSQ 300
Query: 323 EGETTSQLVFRDVIMASGSLFSSAGQSHGVNLSALWLPIDLFLEDAMDGSQVLATSAVER 382
EG+T SQL F DV MASGSLFSSAGQSHGVN SALWLPIDLFLEDAMDGSQVLATSAVER
Sbjct: 301 EGKTKSQLEFHDV-MASGSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVER 360
Query: 383 LICLTKSLRAVNDTSWHHTFLGLWIAALRLIQRERNPSEGPVPRLDTCLCMLLSITTLAV 442
LICL KSLRAVND SWH+TFLGLWIAALRLIQRER+PSEGPVPRLDTCLCMLLSITTLAV
Sbjct: 361 LICLIKSLRAVNDASWHNTFLGLWIAALRLIQRERDPSEGPVPRLDTCLCMLLSITTLAV 420
Query: 443 TIIIEEEECELKEE-ECSPSKSRDERQSSGKCRKGLITSLQMLGEYESLLAPPQSVIAVA 502
TIIIEEEE ELKEE ECSPSKSRDE+QSSGK R+GLITSLQMLGEYESLL PPQSVI VA
Sbjct: 421 TIIIEEEEGELKEEDECSPSKSRDEKQSSGKRRQGLITSLQMLGEYESLLTPPQSVIVVA 480
Query: 503 NQAAAKAVMFIAGVAVGNEYYDCVSMNDTPIKCSGNMRHLIVEACISRNLLDTSAYFWPG 562
NQAAAKAVMFI+GVAVGNEYYDCVSMNDTPI CSGNMRHLIVEACISRNLLDTSAYFWPG
Sbjct: 481 NQAAAKAVMFISGVAVGNEYYDCVSMNDTPINCSGNMRHLIVEACISRNLLDTSAYFWPG 540
Query: 563 YVNARKSQVPSSTSGQVVGWSSFMKGSSLTPSMINALVATPASSLAEIEKIYEIAENGSV 622
YVN R SQVP S S QVVGWSSFMKGSSLTPSM+NALVATPASSLAEIEKIYEIA NGS
Sbjct: 541 YVNTRSSQVPRSASSQVVGWSSFMKGSSLTPSMVNALVATPASSLAEIEKIYEIAINGSG 600
Query: 623 DEKISAASVLCGASLVRGWNIQEHIVLFIARLLSPPIPADYSGNDSYLIDYASFLNALLV 682
DEKISAAS+LCGASLVRGWN+QEH VLFI+RLLSPPIPADY G+DSYLIDYA FLN LLV
Sbjct: 601 DEKISAASILCGASLVRGWNLQEHTVLFISRLLSPPIPADYPGSDSYLIDYAPFLNVLLV 660
Query: 683 GISSVDCVQIFSLHGMVPLLAGQLMPICEAFGSSPPKSWILTSGEELTCRAVFSLAFTLL 742
GISSVDCVQIFSLHGMVPLLAGQLMPICEAFGSS PKSWILTSGEELTC AVFSLAFTLL
Sbjct: 661 GISSVDCVQIFSLHGMVPLLAGQLMPICEAFGSSTPKSWILTSGEELTCHAVFSLAFTLL 720
Query: 743 LRLWRFHHPPVENVKGDARPVGSQLTPEYLLLVRNTQLASFGQSPKDRLRAKRLSKLLKF 802
LRLWRFHHPP+ENVKGDARPVGSQLTPEYLLLVRN+QLASFG+SPKDRL+ +RLSKLLKF
Sbjct: 721 LRLWRFHHPPIENVKGDARPVGSQLTPEYLLLVRNSQLASFGKSPKDRLKVRRLSKLLKF 780
Query: 803 SVKPVYMDAFPKLKGWYRQHQECIASILPGLVPGAPVHQIVDALMIMMFKKINRGGQSLA 862
S++P +MD+FPKLKGWYRQHQECIASI PGLVPGAPVHQ VDAL+ MMFKKINRGGQSL
Sbjct: 781 SLEPTFMDSFPKLKGWYRQHQECIASIPPGLVPGAPVHQTVDALLTMMFKKINRGGQSLT 840
Query: 863 STTSGSSNTSGSASEEASIKLKVPAWDILKATPFVLDAALTACAHGRLSTRDLATGLKDL 922
STTS SSN+SGSA+EEASIKLKVPAWDIL+ATPFVLDAALTACAHGRLS RDLATGLKDL
Sbjct: 841 STTSASSNSSGSANEEASIKLKVPAWDILEATPFVLDAALTACAHGRLSPRDLATGLKDL 900
Query: 923 ADFLPATFATIVSYFSAEVTRGIWKPAFMNGTDWPSPAATLSIVEQQIKSILAATGVDVP 982
ADFLPA+FATIV YFSAEVTRGIWKPAFMNGTDWPSPAATLS+VEQQIK ILAATGVDVP
Sbjct: 901 ADFLPASFATIVCYFSAEVTRGIWKPAFMNGTDWPSPAATLSVVEQQIKKILAATGVDVP 960
Query: 983 SLAVGGTSPATLPLPLAALISLTITYKLDKASERLLALVGPALNSIAASCSWPCTPIIAS 1042
SLA+GG+ PA LPLPLAALISLTITYKLDKASERLLALVGPALNS+ A CSWPCTPIIAS
Sbjct: 961 SLALGGSFPAMLPLPLAALISLTITYKLDKASERLLALVGPALNSLVAGCSWPCTPIIAS 1020
Query: 1043 LWSQKVKRWNDFLVFSASRTVFHHNMDAVVQLLKSCFTSTLGLGNSNVFSSGGVGSLLGH 1102
LW+QKVKRWNDFLVFSASRTVFHHN DAVVQLLKSCFTSTLGLGNSNV S GGVG+LLGH
Sbjct: 1021 LWAQKVKRWNDFLVFSASRTVFHHNSDAVVQLLKSCFTSTLGLGNSNVNSGGGVGALLGH 1080
Query: 1103 GFGSNVLGGMSPVAPGILYLRVHRSMRDSLFMVEEIVSILMLSVRDIAVSGLPKEKAEKL 1162
GFGS+VLGGMSP APGILYLRVHR +RD+LF+VEEIVS+LMLSV+DIAV+GLPKEKAEKL
Sbjct: 1081 GFGSHVLGGMSPAAPGILYLRVHRCVRDALFLVEEIVSLLMLSVKDIAVTGLPKEKAEKL 1140
Query: 1163 KKAKYGMRYEQVSFASAMARVKLAASLGASLVWIFGGSGLVQSLFKETLPSWFLSVHSVE 1222
KK+K+GMR EQVSFASAMARVKLAASLGASLVWI GGSGLVQSL+KETLPSWFLSVHSV+
Sbjct: 1141 KKSKHGMRCEQVSFASAMARVKLAASLGASLVWISGGSGLVQSLYKETLPSWFLSVHSVD 1200
Query: 1223 REGVECGGMVAVLGGYALAFFSVLCGTFSWGIDSASSASKRRAKILDSHLEFLASALDGK 1282
REGVE GGMV VL GYALAFFSVLCGTFSWGIDS SSASKRRAK+LDSHLEFLASALDGK
Sbjct: 1201 REGVEYGGMVPVLRGYALAFFSVLCGTFSWGIDSISSASKRRAKLLDSHLEFLASALDGK 1260
Query: 1283 FSIGCDWGTWRAYVSGFVSLMVRCAPRWLLEVDVNLLKRLSKGLRQLNEEELALALLESG 1342
FSIGCDW TWRAYVSGFVSL+VRCAP+WLLEVD+ +LKRL KGLRQLNEEELALALLESG
Sbjct: 1261 FSIGCDWATWRAYVSGFVSLLVRCAPKWLLEVDLKVLKRLGKGLRQLNEEELALALLESG 1320
Query: 1343 GVNAMGAAAELIIEGGF 1359
G+ AMGAAAELII GGF
Sbjct: 1321 GLTAMGAAAELIIGGGF 1336
BLAST of Sed0026391 vs. ExPASy TrEMBL
Match:
A0A6J1HUY1 (mediator of RNA polymerase II transcription subunit 33B-like OS=Cucurbita maxima OX=3661 GN=LOC111466930 PE=4 SV=1)
HSP 1 Score: 2312.3 bits (5991), Expect = 0.0e+00
Identity = 1178/1337 (88.11%), Postives = 1251/1337 (93.57%), Query Frame = 0
Query: 23 MAVSDPPPGQLPVVSGLWDRVLELTKSAQAKNRDPLLWALQLSSTLDSARVSLPSLELAH 82
MAVS PPGQL ++G+WD VLELTKSAQ KN DPLLWA+ LSS+L+SA VSLPS+ELA
Sbjct: 1 MAVSAQPPGQLQGIAGVWDTVLELTKSAQEKNSDPLLWAVHLSSSLNSASVSLPSVELAQ 60
Query: 83 VLVSHICWDNHVPITWKFLDQAMTANIVPPLLVIALLSTRAIPYRKLRTAAYRLYLELLN 142
+LVSHICWDNHVPI WKFL++AMTA IVPPLLVIALLSTRAIPYRKLR AAYRLYLELL+
Sbjct: 61 LLVSHICWDNHVPIMWKFLEKAMTARIVPPLLVIALLSTRAIPYRKLRPAAYRLYLELLS 120
Query: 143 RHIFSLTLQINGPNYQRIMQTIDDVLHLSQIFGLQTCEPGLLMVELFFSIVWQLLDASLD 202
RH+FS TL++NGPNY RIMQTIDDVLHLSQIFGLQTCEPGLL+VELFFSIVW LLDASLD
Sbjct: 121 RHVFSSTLEVNGPNYPRIMQTIDDVLHLSQIFGLQTCEPGLLVVELFFSIVWHLLDASLD 180
Query: 203 DEELLVLPAEERSAWLIRPQPHDMKLDVHESLSEKRTENGERLLKINNEKAIELIGQFLQ 262
DE LL LPAEERS WLIRPQPH+M+LDVH S EK+TEN E LLK+N KAIE+IGQFLQ
Sbjct: 181 DEGLLELPAEERSVWLIRPQPHNMELDVHNSFGEKKTENSENLLKVNTAKAIEIIGQFLQ 240
Query: 263 NKKTARILCLAQQNMPLHWAGFARRLQLLAANSVVLKNTKLITSEVLLHWTSDKHRLLSR 322
NKKTARILCLA QNMPLHWAGFA+RLQLLAANSVVL+NTKLIT EVLLHWTSDKHR LS+
Sbjct: 241 NKKTARILCLAHQNMPLHWAGFAQRLQLLAANSVVLRNTKLITPEVLLHWTSDKHRFLSQ 300
Query: 323 EGETTSQLVFRDVIMASGSLFSSAGQSHGVNLSALWLPIDLFLEDAMDGSQVLATSAVER 382
EG+T SQL F DV MASGSLFSSAGQSHGVN SALWLPIDLFLEDAMDGSQVLATSAVER
Sbjct: 301 EGKTASQLEFHDV-MASGSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVER 360
Query: 383 LICLTKSLRAVNDTSWHHTFLGLWIAALRLIQRERNPSEGPVPRLDTCLCMLLSITTLAV 442
LICL KSLRAVND SWH+TFLGLWIAALRLIQRER+PSEGPVPRLDTCLCMLLSITTLAV
Sbjct: 361 LICLIKSLRAVNDASWHNTFLGLWIAALRLIQRERDPSEGPVPRLDTCLCMLLSITTLAV 420
Query: 443 TIIIEEEECELKEE-ECSPSKSRDERQSSGKCRKGLITSLQMLGEYESLLAPPQSVIAVA 502
TIIIEEEE ELKEE ECSPSKSRDE+QSSGK R+GLIT LQMLGEYESLL PPQSVI VA
Sbjct: 421 TIIIEEEEGELKEEDECSPSKSRDEKQSSGKRRQGLITCLQMLGEYESLLTPPQSVIEVA 480
Query: 503 NQAAAKAVMFIAGVAVGNEYYDCVSMNDTPIKCSGNMRHLIVEACISRNLLDTSAYFWPG 562
NQAAAKAVMFI+GVAVGNE YDCVSMNDTPI CSGNMRHLIVEACISRNLLDTSAYFWPG
Sbjct: 481 NQAAAKAVMFISGVAVGNECYDCVSMNDTPINCSGNMRHLIVEACISRNLLDTSAYFWPG 540
Query: 563 YVNARKSQVPSSTSGQVVGWSSFMKGSSLTPSMINALVATPASSLAEIEKIYEIAENGSV 622
YVN R SQVP S S Q+VGWSSFMKGSSLTPSM+NALVATPASSLAEIEKIYEIA NGS
Sbjct: 541 YVNTRSSQVPRSASSQIVGWSSFMKGSSLTPSMVNALVATPASSLAEIEKIYEIAINGSG 600
Query: 623 DEKISAASVLCGASLVRGWNIQEHIVLFIARLLSPPIPADYSGNDSYLIDYASFLNALLV 682
DEKISAAS+LCGASLVRGWN+QEH VLFI+RLLSPPIPADY G+DSYLIDYA FLN LLV
Sbjct: 601 DEKISAASILCGASLVRGWNLQEHTVLFISRLLSPPIPADYPGSDSYLIDYAPFLNILLV 660
Query: 683 GISSVDCVQIFSLHGMVPLLAGQLMPICEAFGSSPPKSWILTSGEELTCRAVFSLAFTLL 742
GISSVDCVQIFSLHGMVPLLAGQLMPICEAFGSS PKSWIL SGEELTC AVFSLAFTLL
Sbjct: 661 GISSVDCVQIFSLHGMVPLLAGQLMPICEAFGSSTPKSWILASGEELTCHAVFSLAFTLL 720
Query: 743 LRLWRFHHPPVENVKGDARPVGSQLTPEYLLLVRNTQLASFGQSPKDRLRAKRLSKLLKF 802
LRLWRFHHPP+ENVKGDARPVGSQLTPEYLLLVRN+QLASFG+SPKDRL+ +RLSKLLKF
Sbjct: 721 LRLWRFHHPPIENVKGDARPVGSQLTPEYLLLVRNSQLASFGKSPKDRLKVRRLSKLLKF 780
Query: 803 SVKPVYMDAFPKLKGWYRQHQECIASILPGLVPGAPVHQIVDALMIMMFKKINRGGQSLA 862
S++P +MD+FPKLKGWYRQHQECIASI PGLVPGAPVHQ VDAL+ MMFKKINRGGQSL
Sbjct: 781 SLEPTFMDSFPKLKGWYRQHQECIASIPPGLVPGAPVHQTVDALLTMMFKKINRGGQSLT 840
Query: 863 STTSGSSNTSGSASEEASIKLKVPAWDILKATPFVLDAALTACAHGRLSTRDLATGLKDL 922
STTSGSSN+SGSA+EEASIKLKVP+WDIL+ATPFVLDAALTACAHGRLS RDLATGLKDL
Sbjct: 841 STTSGSSNSSGSANEEASIKLKVPSWDILEATPFVLDAALTACAHGRLSPRDLATGLKDL 900
Query: 923 ADFLPATFATIVSYFSAEVTRGIWKPAFMNGTDWPSPAATLSIVEQQIKSILAATGVDVP 982
ADFLPA+FATIV YFSAEVTRGIWKPAFMNGTDWPSPAATLS+VEQQIK ILAATGVDVP
Sbjct: 901 ADFLPASFATIVCYFSAEVTRGIWKPAFMNGTDWPSPAATLSVVEQQIKKILAATGVDVP 960
Query: 983 SLAVGGTSPATLPLPLAALISLTITYKLDKASERLLALVGPALNSIAASCSWPCTPIIAS 1042
SLA+GG+ PA LPLPLAALISLTITYKLDKASERLLALVGPALNS+ A CSWPCTPIIAS
Sbjct: 961 SLALGGSFPAMLPLPLAALISLTITYKLDKASERLLALVGPALNSLVAGCSWPCTPIIAS 1020
Query: 1043 LWSQKVKRWNDFLVFSASRTVFHHNMDAVVQLLKSCFTSTLGLGNSNVFSSGGVGSLLGH 1102
LW+QKVKRWNDFLVFSASRTVFHHN DAVVQLLKSCFTSTLGLGNSNV S GGVG+LLGH
Sbjct: 1021 LWAQKVKRWNDFLVFSASRTVFHHNSDAVVQLLKSCFTSTLGLGNSNVNSGGGVGALLGH 1080
Query: 1103 GFGSNVLGGMSPVAPGILYLRVHRSMRDSLFMVEEIVSILMLSVRDIAVSGLPKEKAEKL 1162
GFGS+VLGGMSPVAPGILYLRVHR +RD+LF+VEEIVS+LMLSV+DIAV+G+PKEKAEKL
Sbjct: 1081 GFGSHVLGGMSPVAPGILYLRVHRCVRDALFLVEEIVSLLMLSVKDIAVTGVPKEKAEKL 1140
Query: 1163 KKAKYGMRYEQVSFASAMARVKLAASLGASLVWIFGGSGLVQSLFKETLPSWFLSVHSVE 1222
KK+K+GMR EQVSFASAMARVKLAASLGASLVWI GGSGLVQSL+KETLPSWFLSVHSV+
Sbjct: 1141 KKSKHGMRCEQVSFASAMARVKLAASLGASLVWISGGSGLVQSLYKETLPSWFLSVHSVD 1200
Query: 1223 REGVECGGMVAVLGGYALAFFSVLCGTFSWGIDSASSASKRRAKILDSHLEFLASALDGK 1282
REGVE GGMV VL GYALAFFSVLCG FSWGIDS SSASKRRAKILDSHLEFLASALDGK
Sbjct: 1201 REGVEYGGMVPVLRGYALAFFSVLCGMFSWGIDSTSSASKRRAKILDSHLEFLASALDGK 1260
Query: 1283 FSIGCDWGTWRAYVSGFVSLMVRCAPRWLLEVDVNLLKRLSKGLRQLNEEELALALLESG 1342
FSIGCDW TWRAYVSGFVSL+VRCAP+WLLEVD+ +LKRL KGLRQLNEEELALALLESG
Sbjct: 1261 FSIGCDWATWRAYVSGFVSLLVRCAPKWLLEVDLKVLKRLGKGLRQLNEEELALALLESG 1320
Query: 1343 GVNAMGAAAELIIEGGF 1359
G+ AMGAAAELIIEGGF
Sbjct: 1321 GLTAMGAAAELIIEGGF 1336
BLAST of Sed0026391 vs. ExPASy TrEMBL
Match:
A0A1S3BMJ1 (mediator of RNA polymerase II transcription subunit 33B-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103491278 PE=4 SV=1)
HSP 1 Score: 2312.0 bits (5990), Expect = 0.0e+00
Identity = 1183/1336 (88.55%), Postives = 1254/1336 (93.86%), Query Frame = 0
Query: 23 MAVSDPPPGQLPVVSGLWDRVLELTKSAQAKNRDPLLWALQLSSTLDSARVSLPSLELAH 82
MAVS PPGQL ++GLWD VLE+TKSAQ KN DPLLWA+QLSSTL+SA VSLPS+ELA
Sbjct: 1 MAVSAQPPGQLQGIAGLWDTVLEVTKSAQDKNCDPLLWAVQLSSTLNSAGVSLPSVELAQ 60
Query: 83 VLVSHICWDNHVPITWKFLDQAMTANIVPPLLVIALLSTRAIPYRKLRTAAYRLYLELLN 142
+LVSHICWDNHVPI WKFL++AMTA IVPPLLVIALLSTRAIPYRKL+ AAYRLYLELL+
Sbjct: 61 LLVSHICWDNHVPIMWKFLEKAMTARIVPPLLVIALLSTRAIPYRKLQPAAYRLYLELLS 120
Query: 143 RHIFSLTLQINGPNYQRIMQTIDDVLHLSQIFGLQTCEPGLLMVELFFSIVWQLLDASLD 202
RH+FS T QI GPNYQRIMQTIDDVLHL+QIFGLQTCEPG+LMVELFFSIVWQLLDASLD
Sbjct: 121 RHVFSSTSQIYGPNYQRIMQTIDDVLHLTQIFGLQTCEPGVLMVELFFSIVWQLLDASLD 180
Query: 203 DEELLVLPAEERSAWLIRPQPHDMKLDVHESLSEKRTENGERLLKINNEKAIELIGQFLQ 262
DE LL LP EE+SAWLIRPQ HDM+LDVH+S EK+TEN E LLK+N KAIE+IGQFLQ
Sbjct: 181 DEGLLALPGEEKSAWLIRPQLHDMELDVHDSFGEKKTENSESLLKVNTAKAIEIIGQFLQ 240
Query: 263 NKKTARILCLAQQNMPLHWAGFARRLQLLAANSVVLKNTKLITSEVLLHWTSDKHRLLSR 322
NKKT RILCLA +NMPL WAGFA+RLQLL ANSVVL N KLIT EVLLHWTSDK++LLS+
Sbjct: 241 NKKTERILCLALRNMPLQWAGFAQRLQLLGANSVVLGNAKLITPEVLLHWTSDKNKLLSQ 300
Query: 323 EGETTSQLVFRDVIMASGSLFSSAGQSHGVNLSALWLPIDLFLEDAMDGSQVLATSAVER 382
+G+ TSQL FRDV M+SGSLFSSAGQSHGVN SALWLPIDLFLEDAMDGSQVLATSAVER
Sbjct: 301 KGK-TSQLEFRDV-MSSGSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVER 360
Query: 383 LICLTKSLRAVNDTSWHHTFLGLWIAALRLIQRERNPSEGPVPRLDTCLCMLLSITTLAV 442
LICL KSLRAVNDTSWH+TFLGLWIAALRLIQRER+PSEGPVPRLDTCLCMLLSI+TLAV
Sbjct: 361 LICLIKSLRAVNDTSWHNTFLGLWIAALRLIQRERDPSEGPVPRLDTCLCMLLSISTLAV 420
Query: 443 TIIIEEEECELKEEECSPSKSRDERQSSGKCRKGLITSLQMLGEYESLLAPPQSVIAVAN 502
TIIIEEEE E KE++CSPSKSRDE+QSSG CRKGLITSLQMLGEYESLL PPQS+IAVAN
Sbjct: 421 TIIIEEEEVEPKEDDCSPSKSRDEKQSSGMCRKGLITSLQMLGEYESLLTPPQSIIAVAN 480
Query: 503 QAAAKAVMFIAGVAVGNEYYDCVSMNDTPIKCSGNMRHLIVEACISRNLLDTSAYFWPGY 562
QAAAKAVMFI+GVAVGNEYYDC SMND PI CSGNMRHLIVEACISRNLLDTSAYFWPGY
Sbjct: 481 QAAAKAVMFISGVAVGNEYYDCASMNDAPINCSGNMRHLIVEACISRNLLDTSAYFWPGY 540
Query: 563 VNARKSQVPSSTSGQVVGWSSFMKGSSLTPSMINALVATPASSLAEIEKIYEIAENGSVD 622
VNA SQVP S S QVVGWSSFMKGS LTPSM+NALVATPASSLAEIEKIYEIA NGS D
Sbjct: 541 VNALSSQVPRSASNQVVGWSSFMKGSPLTPSMVNALVATPASSLAEIEKIYEIAINGSGD 600
Query: 623 EKISAASVLCGASLVRGWNIQEHIVLFIARLLSPPIPADYSGNDSYLIDYASFLNALLVG 682
EKISAAS+LCGASLVRGW +QEH LFI+RLL PPIP DYSG+DSYLIDYA FLN LLVG
Sbjct: 601 EKISAASILCGASLVRGWYLQEHTALFISRLLLPPIPTDYSGSDSYLIDYAPFLNVLLVG 660
Query: 683 ISSVDCVQIFSLHGMVPLLAGQLMPICEAFGSSPPKSWILTSGEELTCRAVFSLAFTLLL 742
ISSVDCVQIFSLHGMVPLLAGQLMPICEAFGSSPPKSWILTSGEELTC AVFSLAFTLLL
Sbjct: 661 ISSVDCVQIFSLHGMVPLLAGQLMPICEAFGSSPPKSWILTSGEELTCHAVFSLAFTLLL 720
Query: 743 RLWRFHHPPVENVKGDARPVGSQLTPEYLLLVRNTQLASFGQSPKDRLRAKRLSKLLKFS 802
RLWRFHHPPVENVKGDARPVGSQLTPEYLLLVRN+QLASFG+SP DRL+A+RLSKLLKFS
Sbjct: 721 RLWRFHHPPVENVKGDARPVGSQLTPEYLLLVRNSQLASFGKSPNDRLKARRLSKLLKFS 780
Query: 803 VKPVYMDAFPKLKGWYRQHQECIASILPGLVPGAPVHQIVDALMIMMFKKINRGGQSLAS 862
++P++MD+FPKLKGWYRQHQECIASIL GLVPGAPVHQIVDAL+ MMF+KINRGGQSL S
Sbjct: 781 LQPIFMDSFPKLKGWYRQHQECIASILSGLVPGAPVHQIVDALLTMMFRKINRGGQSLTS 840
Query: 863 TTSGSSNTSGSASEEASIKLKVPAWDILKATPFVLDAALTACAHGRLSTRDLATGLKDLA 922
TTSGSSN+SGSA+EEASIKLKVPAWDIL+ATPFVLDAALTACAHGRLS RDLATGLKDLA
Sbjct: 841 TTSGSSNSSGSANEEASIKLKVPAWDILEATPFVLDAALTACAHGRLSPRDLATGLKDLA 900
Query: 923 DFLPATFATIVSYFSAEVTRGIWKPAFMNGTDWPSPAATLSIVEQQIKSILAATGVDVPS 982
DFLPA+FATIVSYFSAEVTRGIWKPAFMNGTDWPSPAATLSIVEQQIK ILAATGVDVP
Sbjct: 901 DFLPASFATIVSYFSAEVTRGIWKPAFMNGTDWPSPAATLSIVEQQIKKILAATGVDVPC 960
Query: 983 LAVGGTSPATLPLPLAALISLTITYKLDKASERLLALVGPALNSIAASCSWPCTPIIASL 1042
LAVGG+SPA LPLPLAALISLTITYKLDKASERLLALVGPALNS+AASCSWPCTPIIASL
Sbjct: 961 LAVGGSSPAMLPLPLAALISLTITYKLDKASERLLALVGPALNSLAASCSWPCTPIIASL 1020
Query: 1043 WSQKVKRWNDFLVFSASRTVFHHNMDAVVQLLKSCFTSTLGLGNSNVFSSGGVGSLLGHG 1102
W+QKVKRWNDFLVFSASRTVFHHN DAVVQLLKSCFTSTLGLGNSN +SGGVG+LLGHG
Sbjct: 1021 WAQKVKRWNDFLVFSASRTVFHHNSDAVVQLLKSCFTSTLGLGNSNGNNSGGVGTLLGHG 1080
Query: 1103 FGSNVLGGMSPVAPGILYLRVHRSMRDSLFMVEEIVSILMLSVRDIAVSGLPKEKAEKLK 1162
FGS+VLGGMSPVAPGILYLRVHRS+RD LF+VEEIVS+LMLSVRDIAVSGLPKEKAEKLK
Sbjct: 1081 FGSHVLGGMSPVAPGILYLRVHRSVRDVLFVVEEIVSLLMLSVRDIAVSGLPKEKAEKLK 1140
Query: 1163 KAKYGMRYEQVSFASAMARVKLAASLGASLVWIFGGSGLVQSLFKETLPSWFLSVHSVER 1222
K KYGMRYEQVSFASAMARVKLAASLGASLVWI GGSGLVQSLFKETLPSWFLSVHSVER
Sbjct: 1141 KTKYGMRYEQVSFASAMARVKLAASLGASLVWISGGSGLVQSLFKETLPSWFLSVHSVER 1200
Query: 1223 EGVECGGMVAVLGGYALAFFSVLCGTFSWGIDSASSASKRRAKILDSHLEFLASALDGKF 1282
EGV GGMVAVL G+ALAFFSVLCGTFSWGIDS+SSASKRRAKILDS+LEFLASALDGKF
Sbjct: 1201 EGVNYGGMVAVLRGHALAFFSVLCGTFSWGIDSSSSASKRRAKILDSYLEFLASALDGKF 1260
Query: 1283 SIGCDWGTWRAYVSGFVSLMVRCAPRWLLEVDVNLLKRLSKGLRQLNEEELALALLESGG 1342
SIGCDW TWRAYVSGFVSL+VRCAPRWLLEVD+N+L RLS GLRQLNEEEL L LLESGG
Sbjct: 1261 SIGCDWATWRAYVSGFVSLIVRCAPRWLLEVDLNVLTRLSNGLRQLNEEELGLELLESGG 1320
Query: 1343 VNAMGAAAELIIEGGF 1359
VNAMGAAAELIIEGGF
Sbjct: 1321 VNAMGAAAELIIEGGF 1334
BLAST of Sed0026391 vs. ExPASy TrEMBL
Match:
A0A1S4DXP9 (mediator of RNA polymerase II transcription subunit 33A-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103491278 PE=4 SV=1)
HSP 1 Score: 2094.7 bits (5426), Expect = 0.0e+00
Identity = 1072/1198 (89.48%), Postives = 1131/1198 (94.41%), Query Frame = 0
Query: 161 MQTIDDVLHLSQIFGLQTCEPGLLMVELFFSIVWQLLDASLDDEELLVLPAEERSAWLIR 220
MQTIDDVLHL+QIFGLQTCEPG+LMVELFFSIVWQLLDASLDDE LL LP EE+SAWLIR
Sbjct: 1 MQTIDDVLHLTQIFGLQTCEPGVLMVELFFSIVWQLLDASLDDEGLLALPGEEKSAWLIR 60
Query: 221 PQPHDMKLDVHESLSEKRTENGERLLKINNEKAIELIGQFLQNKKTARILCLAQQNMPLH 280
PQ HDM+LDVH+S EK+TEN E LLK+N KAIE+IGQFLQNKKT RILCLA +NMPL
Sbjct: 61 PQLHDMELDVHDSFGEKKTENSESLLKVNTAKAIEIIGQFLQNKKTERILCLALRNMPLQ 120
Query: 281 WAGFARRLQLLAANSVVLKNTKLITSEVLLHWTSDKHRLLSREGETTSQLVFRDVIMASG 340
WAGFA+RLQLL ANSVVL N KLIT EVLLHWTSDK++LLS++G+ TSQL FRDV M+SG
Sbjct: 121 WAGFAQRLQLLGANSVVLGNAKLITPEVLLHWTSDKNKLLSQKGK-TSQLEFRDV-MSSG 180
Query: 341 SLFSSAGQSHGVNLSALWLPIDLFLEDAMDGSQVLATSAVERLICLTKSLRAVNDTSWHH 400
SLFSSAGQSHGVN SALWLPIDLFLEDAMDGSQVLATSAVERLICL KSLRAVNDTSWH+
Sbjct: 181 SLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERLICLIKSLRAVNDTSWHN 240
Query: 401 TFLGLWIAALRLIQRERNPSEGPVPRLDTCLCMLLSITTLAVTIIIEEEECELKEEECSP 460
TFLGLWIAALRLIQRER+PSEGPVPRLDTCLCMLLSI+TLAVTIIIEEEE E KE++CSP
Sbjct: 241 TFLGLWIAALRLIQRERDPSEGPVPRLDTCLCMLLSISTLAVTIIIEEEEVEPKEDDCSP 300
Query: 461 SKSRDERQSSGKCRKGLITSLQMLGEYESLLAPPQSVIAVANQAAAKAVMFIAGVAVGNE 520
SKSRDE+QSSG CRKGLITSLQMLGEYESLL PPQS+IAVANQAAAKAVMFI+GVAVGNE
Sbjct: 301 SKSRDEKQSSGMCRKGLITSLQMLGEYESLLTPPQSIIAVANQAAAKAVMFISGVAVGNE 360
Query: 521 YYDCVSMNDTPIKCSGNMRHLIVEACISRNLLDTSAYFWPGYVNARKSQVPSSTSGQVVG 580
YYDC SMND PI CSGNMRHLIVEACISRNLLDTSAYFWPGYVNA SQVP S S QVVG
Sbjct: 361 YYDCASMNDAPINCSGNMRHLIVEACISRNLLDTSAYFWPGYVNALSSQVPRSASNQVVG 420
Query: 581 WSSFMKGSSLTPSMINALVATPASSLAEIEKIYEIAENGSVDEKISAASVLCGASLVRGW 640
WSSFMKGS LTPSM+NALVATPASSLAEIEKIYEIA NGS DEKISAAS+LCGASLVRGW
Sbjct: 421 WSSFMKGSPLTPSMVNALVATPASSLAEIEKIYEIAINGSGDEKISAASILCGASLVRGW 480
Query: 641 NIQEHIVLFIARLLSPPIPADYSGNDSYLIDYASFLNALLVGISSVDCVQIFSLHGMVPL 700
+QEH LFI+RLL PPIP DYSG+DSYLIDYA FLN LLVGISSVDCVQIFSLHGMVPL
Sbjct: 481 YLQEHTALFISRLLLPPIPTDYSGSDSYLIDYAPFLNVLLVGISSVDCVQIFSLHGMVPL 540
Query: 701 LAGQLMPICEAFGSSPPKSWILTSGEELTCRAVFSLAFTLLLRLWRFHHPPVENVKGDAR 760
LAGQLMPICEAFGSSPPKSWILTSGEELTC AVFSLAFTLLLRLWRFHHPPVENVKGDAR
Sbjct: 541 LAGQLMPICEAFGSSPPKSWILTSGEELTCHAVFSLAFTLLLRLWRFHHPPVENVKGDAR 600
Query: 761 PVGSQLTPEYLLLVRNTQLASFGQSPKDRLRAKRLSKLLKFSVKPVYMDAFPKLKGWYRQ 820
PVGSQLTPEYLLLVRN+QLASFG+SP DRL+A+RLSKLLKFS++P++MD+FPKLKGWYRQ
Sbjct: 601 PVGSQLTPEYLLLVRNSQLASFGKSPNDRLKARRLSKLLKFSLQPIFMDSFPKLKGWYRQ 660
Query: 821 HQECIASILPGLVPGAPVHQIVDALMIMMFKKINRGGQSLASTTSGSSNTSGSASEEASI 880
HQECIASIL GLVPGAPVHQIVDAL+ MMF+KINRGGQSL STTSGSSN+SGSA+EEASI
Sbjct: 661 HQECIASILSGLVPGAPVHQIVDALLTMMFRKINRGGQSLTSTTSGSSNSSGSANEEASI 720
Query: 881 KLKVPAWDILKATPFVLDAALTACAHGRLSTRDLATGLKDLADFLPATFATIVSYFSAEV 940
KLKVPAWDIL+ATPFVLDAALTACAHGRLS RDLATGLKDLADFLPA+FATIVSYFSAEV
Sbjct: 721 KLKVPAWDILEATPFVLDAALTACAHGRLSPRDLATGLKDLADFLPASFATIVSYFSAEV 780
Query: 941 TRGIWKPAFMNGTDWPSPAATLSIVEQQIKSILAATGVDVPSLAVGGTSPATLPLPLAAL 1000
TRGIWKPAFMNGTDWPSPAATLSIVEQQIK ILAATGVDVP LAVGG+SPA LPLPLAAL
Sbjct: 781 TRGIWKPAFMNGTDWPSPAATLSIVEQQIKKILAATGVDVPCLAVGGSSPAMLPLPLAAL 840
Query: 1001 ISLTITYKLDKASERLLALVGPALNSIAASCSWPCTPIIASLWSQKVKRWNDFLVFSASR 1060
ISLTITYKLDKASERLLALVGPALNS+AASCSWPCTPIIASLW+QKVKRWNDFLVFSASR
Sbjct: 841 ISLTITYKLDKASERLLALVGPALNSLAASCSWPCTPIIASLWAQKVKRWNDFLVFSASR 900
Query: 1061 TVFHHNMDAVVQLLKSCFTSTLGLGNSNVFSSGGVGSLLGHGFGSNVLGGMSPVAPGILY 1120
TVFHHN DAVVQLLKSCFTSTLGLGNSN +SGGVG+LLGHGFGS+VLGGMSPVAPGILY
Sbjct: 901 TVFHHNSDAVVQLLKSCFTSTLGLGNSNGNNSGGVGTLLGHGFGSHVLGGMSPVAPGILY 960
Query: 1121 LRVHRSMRDSLFMVEEIVSILMLSVRDIAVSGLPKEKAEKLKKAKYGMRYEQVSFASAMA 1180
LRVHRS+RD LF+VEEIVS+LMLSVRDIAVSGLPKEKAEKLKK KYGMRYEQVSFASAMA
Sbjct: 961 LRVHRSVRDVLFVVEEIVSLLMLSVRDIAVSGLPKEKAEKLKKTKYGMRYEQVSFASAMA 1020
Query: 1181 RVKLAASLGASLVWIFGGSGLVQSLFKETLPSWFLSVHSVEREGVECGGMVAVLGGYALA 1240
RVKLAASLGASLVWI GGSGLVQSLFKETLPSWFLSVHSVEREGV GGMVAVL G+ALA
Sbjct: 1021 RVKLAASLGASLVWISGGSGLVQSLFKETLPSWFLSVHSVEREGVNYGGMVAVLRGHALA 1080
Query: 1241 FFSVLCGTFSWGIDSASSASKRRAKILDSHLEFLASALDGKFSIGCDWGTWRAYVSGFVS 1300
FFSVLCGTFSWGIDS+SSASKRRAKILDS+LEFLASALDGKFSIGCDW TWRAYVSGFVS
Sbjct: 1081 FFSVLCGTFSWGIDSSSSASKRRAKILDSYLEFLASALDGKFSIGCDWATWRAYVSGFVS 1140
Query: 1301 LMVRCAPRWLLEVDVNLLKRLSKGLRQLNEEELALALLESGGVNAMGAAAELIIEGGF 1359
L+VRCAPRWLLEVD+N+L RLS GLRQLNEEEL L LLESGGVNAMGAAAELIIEGGF
Sbjct: 1141 LIVRCAPRWLLEVDLNVLTRLSNGLRQLNEEELGLELLESGGVNAMGAAAELIIEGGF 1196
BLAST of Sed0026391 vs. TAIR 10
Match:
AT3G23590.1 (REF4-related 1 )
HSP 1 Score: 1457.2 bits (3771), Expect = 0.0e+00
Identity = 767/1319 (58.15%), Postives = 973/1319 (73.77%), Query Frame = 0
Query: 39 LWDRVLELTKSAQAKNRDPLLWALQLSSTLDSARVSLPSLELAHVLVSHICWDNHVPITW 98
+WD V+ELTK AQ DP LWA QLSS L V LPS ELA V+VS+ICWDN+VPI W
Sbjct: 9 VWDCVIELTKMAQENCVDPRLWASQLSSNLKFFAVELPSTELAEVIVSYICWDNNVPIVW 68
Query: 99 KFLDQAMTANIVPPLLVIALLSTRAIPYRKLRTAAYRLYLELLNRHIFSLTLQINGPNYQ 158
KFL++AM +V PL+V+ALL+ R +P R + AAYR+YLELL R++F++ I+GP+YQ
Sbjct: 69 KFLERAMALKLVSPLVVLALLADRVVPTRSTQQAAYRIYLELLKRNMFTIKDHISGPHYQ 128
Query: 159 RIMQTIDDVLHLSQIFGLQTCEPGLLMVELFFSIVWQLLDASLDDEELLVLPAEERSAWL 218
++M ++ ++L LS++F L T +PG+L+VE F +V QLLDA+L DE LL L + S WL
Sbjct: 129 KVMISVSNILRLSELFDLDTSKPGVLLVEFVFKMVSQLLDAALSDEGLLELSQDSSSQWL 188
Query: 219 IRPQPHDMKLDVHESLSEKRTENGERLLKINNEKAIELIGQFLQNKKTARILCLAQQNMP 278
++ Q DM++D E +EK T + E+L +N AIELI +FL+N AR+L L N
Sbjct: 189 VKSQ--DMEIDAPERYNEK-TGSLEKLQSLNTIMAIELIAEFLRNTVIARLLYLVSSNRA 248
Query: 279 LHWAGFARRLQLLAANSVVLKNTKLITSEVLLHWTSDKHRLLSREGETTSQLVFRDVIMA 338
W F +++QLL NS LK++K++ S LL S++ S + + TS + I+
Sbjct: 249 SKWHEFVQKVQLLGENSSALKHSKVLNSGDLLQLISNRRFGYSYDSKVTSARK-SNAIVD 308
Query: 339 SGSLFSSAGQSHGVNLSALWLPIDLFLEDAMDGSQVLATSAVERLICLTKSLRAVNDTSW 398
GSL S AG HG +LS+LWLP+DL EDAMDG QV TSA+E + L K+L+ +N ++W
Sbjct: 309 FGSLSSYAGLCHGASLSSLWLPLDLVFEDAMDGYQVNPTSAIEIITGLAKTLKEINGSTW 368
Query: 399 HHTFLGLWIAALRLIQRERNPSEGPVPRLDTCLCMLLSITTLAVTIIIEEEECELKEEEC 458
H TFLGLWIAALRL+QRER+P EGP+PRLDT LCM L I L V +IEE + E E
Sbjct: 369 HDTFLGLWIAALRLVQRERDPIEGPIPRLDTRLCMSLCIVPLVVANLIEEGKYESVME-- 428
Query: 459 SPSKSRDERQSSGKCRKGLITSLQMLGEYESLLAPPQSVIAVANQAAAKAVMFIAGVAVG 518
K R L+TSLQ+LG++ LLAPP+ V++ AN+AA KA++F++G VG
Sbjct: 429 -------------KLRDDLVTSLQVLGDFPGLLAPPKCVVSAANKAATKAILFLSGGNVG 488
Query: 519 NEYYDCVSMNDTPIKCSGNMRHLIVEACISRNLLDTSAYFWPGYVNARKSQVPSSTSGQV 578
+D ++M D P+ CSGNMRHLIVEACI+RN+LD SAY WPGYVN R +Q+P S +V
Sbjct: 489 KSCFDVINMKDMPVNCSGNMRHLIVEACIARNILDMSAYSWPGYVNGRINQIPQSLPNEV 548
Query: 579 VGWSSFMKGSSLTPSMINALVATPASSLAEIEKIYEIAENGSVDEKISAASVLCGASLVR 638
WSSF+KG+ L +M+N LV+ PASSLAE+EK++E+A GS DEKISAA+VLCGASL R
Sbjct: 549 PCWSSFVKGAPLNAAMVNTLVSVPASSLAELEKLFEVAVKGSDDEKISAATVLCGASLTR 608
Query: 639 GWNIQEHIVLFIARLLSPPIPADYSGNDSYLIDYASFLNALLVGISSVDCVQIFSLHGMV 698
GWNIQEH V ++ RLLSPP+PADYS +++LI YA LN ++VGI SVD +QIFSLHGMV
Sbjct: 609 GWNIQEHTVEYLTRLLSPPVPADYSRAENHLIGYACMLNVVIVGIGSVDSIQIFSLHGMV 668
Query: 699 PLLAGQLMPICEAFGS-SPPKSWILTSGEELTCRAVFSLAFTLLLRLWRFHHPPVENVKG 758
P LA LMPICE FGS +P SW L SGE ++ +VFS AFTLLL+LWRF+HPP+E+ G
Sbjct: 669 PQLACSLMPICEEFGSYTPSVSWTLPSGEAISAYSVFSNAFTLLLKLWRFNHPPIEHGVG 728
Query: 759 DARPVGSQLTPEYLLLVRNTQLASFGQSPKDRLRAKRLSKLLK-FSVKPVYMDAFPKLKG 818
D VGSQLTPE+LL VRN+ L S +DR R KRLS++ + S +PV++D+FPKLK
Sbjct: 729 DVPTVGSQLTPEHLLSVRNSYLVSSEILDRDRNR-KRLSEVARAASCQPVFVDSFPKLKV 788
Query: 819 WYRQHQECIASILPGLVPGAPVHQIVDALMIMMFKKINRGGQSLASTTSGSSNTSGSASE 878
WYRQHQ CIA+ L GL G+PVHQ V+AL+ M F K+ RG Q+L SG+S++SG+ASE
Sbjct: 789 WYRQHQRCIAATLSGLTHGSPVHQTVEALLNMTFGKV-RGSQTLNPVNSGTSSSSGAASE 848
Query: 879 EASIKLKVPAWDILKATPFVLDAALTACAHGRLSTRDLATGLKDLADFLPATFATIVSYF 938
+++I+ + PAWDILKA P+V+DAALTAC HGRLS R LATGLKDLADFLPA+ ATIVSYF
Sbjct: 849 DSNIRPEFPAWDILKAVPYVVDAALTACTHGRLSPRQLATGLKDLADFLPASLATIVSYF 908
Query: 939 SAEVTRGIWKPAFMNGTDWPSPAATLSIVEQQIKSILAATGVDVPSLAVGGTSPATLPLP 998
SAEV+RG+WKP FMNG DWPSPA LS VE+ I ILA TGVD+PSLA GG+SPATLPLP
Sbjct: 909 SAEVSRGVWKPVFMNGVDWPSPATNLSTVEEYITKILATTGVDIPSLAPGGSSPATLPLP 968
Query: 999 LAALISLTITYKLDKASERLLALVGPALNSIAASCSWPCTPIIASLWSQKVKRWNDFLVF 1058
LAA +SLTITYK+DKASER L L GPAL +AA C WPC PI+ASLW+QK KRW DFLVF
Sbjct: 969 LAAFVSLTITYKIDKASERFLNLAGPALECLAAGCPWPCMPIVASLWTQKAKRWFDFLVF 1028
Query: 1059 SASRTVFHHNMDAVVQLLKSCFTSTLGLGNSNVFSSGGVGSLLGHGFGSNVLGGMSPVAP 1118
SASRTVF HN DAV+QLL++CF++TLGL + + + GGVG+LLGHGFGS+ GG+SPVAP
Sbjct: 1029 SASRTVFLHNQDAVIQLLRNCFSATLGLNAAPMSNDGGVGALLGHGFGSHFYGGISPVAP 1088
Query: 1119 GILYLRVHRSMRDSLFMVEEIVSILMLSVRDIAVSGLPKEKAEKLKKAKYGMRYEQVSFA 1178
GILYLR++R++RD++ + EEI+S+L+ SV DIA + L KEK EKLK K G RY Q S A
Sbjct: 1089 GILYLRMYRALRDTVSVSEEILSLLIHSVEDIAQNRLSKEKLEKLKTVKNGSRYGQSSLA 1148
Query: 1179 SAMARVKLAASLGASLVWIFGGSGLVQSLFKETLPSWFLSVHSVEREGVECGGMVAVLGG 1238
+AM +VKLAASL ASLVW+ GG G+V L KET+PSWFLS +RE +VA L G
Sbjct: 1149 TAMTQVKLAASLSASLVWLTGGLGVVHVLIKETIPSWFLSTDKSDREQGP-SDLVAELRG 1208
Query: 1239 YALAFFSVLCGTFSWGIDSASSASKRRAK-ILDSHLEFLASALDGKFSIGCDWGTWRAYV 1298
+ALA+F VLCG +WG+DS SSASKRR + IL SHLEF+ASALDGK S+GC+ TWR Y+
Sbjct: 1209 HALAYFVVLCGALTWGVDSRSSASKRRRQAILGSHLEFIASALDGKISVGCETATWRTYI 1268
Query: 1299 SGFVSLMVRCAPRWLLEVDVNLLKRLSKGLRQLNEEELALALLESGGVNAMGAAAELII 1355
SG VSLMV C P W+ E+D +LK LS GLR+ ++ELA+ LL GG+ M AA+ II
Sbjct: 1269 SGLVSLMVSCLPLWVTEIDTEVLKSLSNGLRKWGKDELAIVLLSLGGLKTMDYAADFII 1305
BLAST of Sed0026391 vs. TAIR 10
Match:
AT2G48110.1 (reduced epidermal fluorescence 4 )
HSP 1 Score: 1446.4 bits (3743), Expect = 0.0e+00
Identity = 790/1340 (58.96%), Postives = 953/1340 (71.12%), Query Frame = 0
Query: 39 LWDRVLELTKSAQAKNRDPLLWALQLSSTLDSARVSLPSLELAHVLVSHICWDNHVPITW 98
LW+ V L +SAQ KN DPL WALQL TL SA +SLPS +LA LV+HI W+NH P++W
Sbjct: 10 LWESVTSLIRSAQEKNVDPLHWALQLRLTLASAGISLPSPDLAQFLVTHIFWENHSPLSW 69
Query: 99 KFLDQAMTANIVPPLLVIALLSTRAIPYRKLRTAAYRLYLELLNRHIFSLTLQINGPNYQ 158
K L++A++ NIVPPLLV+ALLS R IP RKL AAYRLY+ELL RH FS I P Y
Sbjct: 70 KLLEKAISVNIVPPLLVLALLSPRVIPNRKLHPAAYRLYMELLKRHAFSFMPLIRAPGYH 129
Query: 159 RIMQTIDDVLHLSQIFGLQTCEPGLLMVELFFSIVWQLLDASLDDEELLVLPAEERSAWL 218
+ M +IDD+LHLS+ FG+Q EPG +++ FSIVW+LLDASLD+E LL L + +RS W
Sbjct: 130 KTMNSIDDILHLSETFGVQDQEPGSILLAFVFSIVWELLDASLDEEGLLELTSNKRSKW- 189
Query: 219 IRPQPHDMKLDVHESLSEKRTENGERLLKINNEKAIELIGQFLQNKKTARILCLAQQNMP 278
PHDM LD E+ S KR EN + L K N E AIELI +FLQNK T+RIL LA QNM
Sbjct: 190 -PSSPHDMDLDGLEN-SVKRNENHDALEKANTEMAIELIQEFLQNKVTSRILHLASQNM- 249
Query: 279 LHWAGFARRLQLLAANSVVLKNTKLITSEVLLHWTSDKHRLLSREGETTSQLVFRDVIMA 338
E +T + F I++
Sbjct: 250 --------------------------------------------ESKTIPRGEFH-AIVS 309
Query: 339 SGSLFSSAGQSHGVNLSALWLPIDLFLEDAMDGSQVLATSAVERLICLTKSLRAVNDTSW 398
SGS + SALWLPIDLF ED MDG+Q A SAVE L L K+L+A N TSW
Sbjct: 310 SGSKLALTSD------SALWLPIDLFFEDIMDGTQAAAASAVENLTGLVKALQAANSTSW 369
Query: 399 HHTFLGLWIAALRLIQR-------------------ERNPSEGPVPRLDTCLCMLLSITT 458
H FL LW+AALRL+QR ER+P EGPVPR DT LC+LLS+T
Sbjct: 370 HDAFLALWLAALRLVQRENLCLRYCFFMHMLEILSEERDPIEGPVPRTDTFLCVLLSVTP 429
Query: 459 LAVTIIIEEEECELKEEECSPSKSRDERQSSGKCRKGLITSLQMLGEYESLLAPPQSVIA 518
LAV IIEEEE + ++ S S S ++ GKCR+GLI SLQ LG+YESLL PP+SV +
Sbjct: 430 LAVANIIEEEESQW-IDQTSSSPSNQWKEKKGKCRQGLINSLQQLGDYESLLTPPRSVQS 489
Query: 519 VANQAAAKAVMFIAGVAVGNEYYDCVSMNDTPIKCSGNMRHLIVEACISRNLLDTSAYFW 578
VANQAAAKA+MFI+G+ N Y+ SM+++ C C R L T F
Sbjct: 490 VANQAAAKAIMFISGITNSNGSYENTSMSESASGC-----------CKVRFSLFTLKMFV 549
Query: 579 PGYVNARKSQVPSSTSGQVVGWSSFMKGSSLTPSMINALVATPASSLAEIEKIYEIAENG 638
V + + WS MKGS LTPS+ N+L+ TPASSLAEIEK+YE+A G
Sbjct: 550 VMGVYLLCN---------ISCWSLVMKGSPLTPSLTNSLITTPASSLAEIEKMYEVATTG 609
Query: 639 SVDEKISAASVLCGASLVRGWNIQEHIVLFIARLLSPPIPADYSGNDSYLIDYASFLNAL 698
S DEKI+ AS+LCGASL RGW+IQEH+++FI LLSPP PAD SG+ S+LI+ A FLN L
Sbjct: 610 SEDEKIAVASILCGASLFRGWSIQEHVIIFIVTLLSPPAPADLSGSYSHLINSAPFLNVL 669
Query: 699 LVGISSVDCVQIFSLHGMVPLLAGQLMPICEAFGSSPPK-SWILTSGEELTCRAVFSLAF 758
LVGIS +DCV IFSLHG+VPLLAG LMPICEAFGS P +W L +GE ++ AVFS AF
Sbjct: 670 LVGISPIDCVHIFSLHGVVPLLAGALMPICEAFGSGVPNITWTLPTGELISSHAVFSTAF 729
Query: 759 TLLLRLWRFHHPPVENVKGDARPVGSQLTPEYLLLVRNTQLASFGQSPKDRLRAKRLSKL 818
TLLLRLWRF HPP++ V GD PVG Q +PEYLLLVRN +L FG+SPKDR+ +R SK+
Sbjct: 730 TLLLRLWRFDHPPLDYVLGDVPPVGPQPSPEYLLLVRNCRLECFGKSPKDRMARRRFSKV 789
Query: 819 LKFSVKPVYMDAFPKLKGWYRQHQECIASILPGLVPGAPVHQIVDALMIMMFKKINRGGQ 878
+ SV P++MD+FP+LK WYRQHQEC+ASIL L G+PVH IVD+L+ MMFKK N+GG
Sbjct: 790 IDISVDPIFMDSFPRLKQWYRQHQECMASILSELKTGSPVHHIVDSLLSMMFKKANKGGS 849
Query: 879 SLASTTSGSSNTSGSASEEASIKLKVPAWDILKATPFVLDAALTACAHGRLSTRDLATGL 938
+ +SGSS+ S S +++S +LK+PAWDIL+A PFVLDAALTACAHG LS R+LATGL
Sbjct: 850 QSLTPSSGSSSLSTSGGDDSSDQLKLPAWDILEAAPFVLDAALTACAHGSLSPRELATGL 909
Query: 939 KDLADFLPATFATIVSYFSAEVTRGIWKPAFMNGTDWPSPAATLSIVEQQIKSILAATGV 998
K LADFLPAT T+VSYFS+EVTRG+WKP MNGTDWPSPAA L+ VEQQI+ ILAATGV
Sbjct: 910 KILADFLPATLGTMVSYFSSEVTRGLWKPVSMNGTDWPSPAANLASVEQQIEKILAATGV 969
Query: 999 DVPSLAVGGTSPATLPLPLAALISLTITYKLDKASERLLALVGPALNSIAASCSWPCTPI 1058
DVP L G S ATLPLPLAAL+SLTITYKLDKA+ER L LVGPAL+S+AA+C WPC PI
Sbjct: 970 DVPRLPADGISAATLPLPLAALVSLTITYKLDKATERFLVLVGPALDSLAAACPWPCMPI 1029
Query: 1059 IASLWSQKVKRWNDFLVFSASRTVFHHNMDAVVQLLKSCFTSTLGL-GNSNVFSSGGVGS 1118
+ SLW+QKVKRW+DFL+FSASRTVFHHN DAV+QLL+SCFT TLGL S + S GGVG+
Sbjct: 1030 VTSLWTQKVKRWSDFLIFSASRTVFHHNRDAVIQLLRSCFTCTLGLTPTSQLCSYGGVGA 1089
Query: 1119 LLGHGFGSNVLGGMSPVAPGILYLRVHRSMRDSLFMVEEIVSILMLSVRDIAVSGLPKEK 1178
LLGHGFGS GG+S APGILY++VHRS+RD +F+ EEI+S+LM SV+ IA LP +
Sbjct: 1090 LLGHGFGSRYSGGISTAAPGILYIKVHRSIRDVMFLTEEILSLLMFSVKSIATRELPAGQ 1149
Query: 1179 AEKLKKAKYGMRY--EQVSFASAMARVKLAASLGASLVWIFGGSGLVQSLFKETLPSWFL 1238
AEKLKK K G RY QVS + AM RVKLAASLGASLVWI GG LVQ+L KETLPSWF+
Sbjct: 1150 AEKLKKTKDGSRYGIGQVSLSLAMRRVKLAASLGASLVWISGGLNLVQALIKETLPSWFI 1209
Query: 1239 SVHSVEREGVECGGMVAVLGGYALAFFSVLCGTFSWGIDSASSASKRRAKILDSHLEFLA 1298
SVH E E GGMV +L GYALA+F++L F+WG+DS+ ASKRR ++L HLEF+
Sbjct: 1210 SVHGEED---ELGGMVPMLRGYALAYFAILSSAFAWGVDSSYPASKRRPRVLWLHLEFMV 1269
Query: 1299 SALDGKFSIGCDWGTWRAYVSGFVSLMVRCAPRWLLEVDVNLLKRLSKGLRQLNEEELAL 1356
SAL+GK S+GCDW TW+AYV+GFVSLMV+C P W+LEVDV ++KRLSK LRQ NE++LAL
Sbjct: 1270 SALEGKISLGCDWATWQAYVTGFVSLMVQCTPAWVLEVDVEVIKRLSKSLRQWNEQDLAL 1270
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_038887593.1 | 0.0e+00 | 89.45 | mediator of RNA polymerase II transcription subunit 33B isoform X1 [Benincasa hi... | [more] |
XP_022155567.1 | 0.0e+00 | 89.01 | mediator of RNA polymerase II transcription subunit 33B-like [Momordica charanti... | [more] |
XP_023554812.1 | 0.0e+00 | 88.63 | mediator of RNA polymerase II transcription subunit 33B-like [Cucurbita pepo sub... | [more] |
KAG6571443.1 | 0.0e+00 | 88.63 | Mediator of RNA polymerase II transcription subunit 33A, partial [Cucurbita argy... | [more] |
XP_022963527.1 | 0.0e+00 | 88.56 | mediator of RNA polymerase II transcription subunit 33B-like [Cucurbita moschata... | [more] |
Match Name | E-value | Identity | Description | |
Q9LUG9 | 0.0e+00 | 58.15 | Mediator of RNA polymerase II transcription subunit 33A OS=Arabidopsis thaliana ... | [more] |
F4IN69 | 0.0e+00 | 58.96 | Mediator of RNA polymerase II transcription subunit 33B OS=Arabidopsis thaliana ... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1DPP9 | 0.0e+00 | 89.01 | mediator of RNA polymerase II transcription subunit 33B-like OS=Momordica charan... | [more] |
A0A6J1HFH4 | 0.0e+00 | 88.56 | mediator of RNA polymerase II transcription subunit 33B-like OS=Cucurbita moscha... | [more] |
A0A6J1HUY1 | 0.0e+00 | 88.11 | mediator of RNA polymerase II transcription subunit 33B-like OS=Cucurbita maxima... | [more] |
A0A1S3BMJ1 | 0.0e+00 | 88.55 | mediator of RNA polymerase II transcription subunit 33B-like isoform X1 OS=Cucum... | [more] |
A0A1S4DXP9 | 0.0e+00 | 89.48 | mediator of RNA polymerase II transcription subunit 33A-like isoform X2 OS=Cucum... | [more] |