Sed0026310 (gene) Chayote v1

Overview


Name	Sed0026310
Type	gene
Organism	Sechium edule (Chayote v1)
Description	upstream activation factor subunit spp27-like
Location	LG07: 42350225 .. 42355273 (+)
RNA-Seq Expression	Sed0026310
Synteny	Sed0026310

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAATGATTGGTCTGTGTCATCACCCACCAAACCTTTGCAGTTACTCAAACCCCAAGCTTTGTCATTTTGTCTTTCCTTCTCAAAAAAAGAAGAGTTCTTGAGAGACATAGAAACAAAAGAGAACCGTTAATTTCGGTTAATTCATGAACCAAATTTGAGAAGAAGAAGCTGCAACAACAAAAATGGTTTCAGACCAAGAGCTTTCTCAAGCTCTACAATGTCTCTTAGCTTCAAACCCTAACCCTAACCCTAACCCTTTTTCTTCCATAAACGACGTCGTTCACCAGTTGCAGTCCAAGCTTGGCCTTGATTTGTCTCATAAGCTTGATTTCATCCATGCCCAGATCCAATTCATCCTTCGTTCTCATCCTCAACAACCCCATCATCTTCTTCATCATCATCATCATCATCATCAACATCTTCATCAGCAGCAAAAAGACCTCTTTGCCCTCCATCAAAGCCCTAATTTCCCATCTGCTCCTTCCCCTACTTCCTCTGCTTTTCATATTTTTGCTGCTCAGCCTCCCCCGGTTCACCCGGAAACCGCCGTGGCTCCTGCTGTTGCCGGTTCTGACCCGCCCAAGGAGAGGTGGGCTTCTTTTTGTTTTTTCAAATTTGGGGTTTCTTTTGGGTTGTTGGGCTTTTGGGGTTCCCCCCCTTTTTTGATTAACTTGTGGTTCTTCTTGGGTTTGCATGTTTGTGTGTATCTCTTTCGATTTTGAAGTGAAGTTCATATTCTGGTGTAATCGAGAAACGGGCGGAGTTAACCATCATCGAGTGACCTAGTAGAGTGTCATAAGTAGCTAAGAACTTATGACCACGGAAATAATTTACTAATGATTTTCTTGATATACAAATTTTGTAGGATCATACATTATATCTGTGTAAGCTGGCTCGAACACTCAGAAATACCAAAAAAATAAGAAAGGGGCGGAGTTATTTGTGAAATCCGTTCTGTTTTGGGCCAATTACACTCAATTTTTTTTTTATCACTTCAGAAGTGAAGTTGATATTCTGATGTAATCGAGAAAGGGCCGGAGTTACGTGTGAAATCCGTTTTATTTTGGGGCAATTACATTATTTTTTGTTTTGCCAAAGAGCATAGCTCGAGTGATATCATGTACGACCTAGTAACCACGAGTTATAAGTTCGAATAGTGACCCTCAAATGTTGAATTAAAAAAAATTACACTCACTTTTTTGTCACTTTCAGAAGTTAAGAATTAGTACCAGAAGGCAATGAAATTGTTTGGTTTCTTGTTGTGAACTTTGTTGAGAGGGTTTAGTTCACTAATTAGTGGTTGTTGGCTTGGTCTTGGTTTTACTGAGGGTTCAATATTGATAAGTTTCCATTGAATGTTGGTATGTCCCAGCTTTGTTTTCCTATATGTCCAGCAGCTTATTCTGATTTCTGGTCACGAATGTGACTTTCCGCTTTCGTCCTGGCTGCTGGGAAAGTAAATCTTCTGTTATGATGTATTTTCAAATGTGTGTACATAGATATCTAATACGAGCATGTTGAGTTTTCACTTTTTGTTTGTCTGTTTTCTTTAAAAGTGTATTGTTGATATATTATTGTTGCTAGTCTAAAATAGTTGCTAGTCTTGTCAGCACAGCCATTGAACATAGACGGAAAAACTTTTCGTAGGAATTTGTAACTTTGGATTTCTGTATCAGCAGGGAAGTGGAGAGGTAGGAAGTAAATTAGATGAGCGGTGCCAGTTTACTGGAAATAGATATCGATATACAGCATCTACTGTGAGGAATCTTTACCGTGTATGTGCAGTTTTCTATGGATATCTCTATAACTTTGACATTTCTGCATATCTTTGGATAATGAGTTTCCAGCCTTGGCCATTCCTTACCAATCTGGGCTTACTTTTATTGTTTAGTCTTGTCTAGCCATGTAGCTTAGAGCTCGTAAACCTGTTGATCTATAGTTTACTTATCAGCTGGTCGCTGTAAGTTCGAATTTTGTTGTTGTGTACTCTAGAAGTCTAGAGGGGATGAGGCAGAATCTTTTAGTCTAGAGGGACATATGTATTTAGTATATGTTTCTCTTTTCTAGGAACTTGAAGTTATTTGTTCAGGCTGATTAAATCACCATTACCACTCGAATGCAGCACCCAGACGAAAACTAAGAGAAGAGGAGGCCCAGGGGGTCTAAATAAGCTTTGTGGTGTTTCTCCTGTACTTCAGACTATTGTGGGCCAACCAGAATTGCCAAGAACTGAGGTACTTACCTACCCCTTTCTTATATCATAGTTTGTTTTTCCCAATTTTGTCGCGTACGGGGTTCATATGATGCTTCTGTGTTTGGTTCAGATAGTGAAACAGCTATGGGCATACATTCGAAAAAACAACCTGCAGGATCCGAGTAACAAAAGGAAAATTATATGTAATGACGAGTTGCGGTTGGTATTCGAGACAGACTGCACTGACATGTTCAAAATGAATAAGTTGTTAGCCAAACACATCATTTCTCTTGAACCTACAAGTAAGTATCCAGTTTGATGCTCCCCTGTCCCCCTAGTTCTGGAAGAAAATCAATAGTTTATGTTCTATAATCTTGTCAGAACCATCAAGTTCTAAGAAGGCACGAGTAGAGAATGAATCTTCGATTGGAGTAAAAGGTGCCGAACGGCCCGAACCTAGTAGTTGTCCTTCCATGATTATATCCGAAGCTCTTGCAAATTTTTTTGGTGTCGATGGAAGGGAGATGCTCCAATCGGAGGTTCTGACACGCATATGGGAATACATAAGATTCAATCATCTTGAGGTTGGCAAATAAACTATGGAAACTTTCACCTTGTTGCATGCTATCCAATCACTACGCATTTAGTCATCTATCTGTCGTAGTATGAAAAACACTTTCCATGAATTTCCATCATACTTAAGGAACTTTTTACTTTTCTTTCTCATATAAATAAAATGAATTCTGGAACTATTTTCATTTCCTAATTTATACACCTGAGGATTTTAAAAGAAAGTCCTTTCGTTTTACGTAGAGTATTACTGTTCTGTTTGTGTGACAGTATGGATACTTACAAACATATGGATACTGTTCATTCTATGGAGTGGGCCGAGTGGCCTAGTGGTCGAGTTCAATCCATGGTAGCTACCCACCTAGAAATTAATTTCCTACGGATTTTCTTGACATCCAAATGTTGTTCGATCTGGAAGTATGTCCCGTGGACCGTTAGAATAGTCGAGGCGTGCATAAGCTAGCTCTGATACTTACGGATACAAAAAAGATATGTTTGTAAGATGATGCATACAAATCTTAAGCTTTTTTTCCATTGACATTCACTTATATTGAAATCGCCTTGTCTCTACTCATGTGTTTCGATATCTTAAAAACAGGACCCTCTAAACCCGATGGCAGTGTTGTGCGACGCGAAACTCCAGGAACTTTTTGGTTGTGAAAGCATTTCTGCACTGGGTATCCCAGAAGTCTTAGGCCGCCACCATATATTTAGGAGATCGTGATAGCTAATCTTCTAGGAATGGTTAGTGCATTCTAACTTTCTTATATTGAGTTGAATCCTACTCTTGAGTAATTTTCTCTAATCCCTATTGTTGCAATTTAACTTTCTTGTTGGCTTCATCATCATTCACATTTTTTTCAAAAGCATATTATTTGATCAATTGAAACTTCTTAGTGTTGGAGGCTGCTGATTGATTAACCGGTTATTACTTGTCCTAGTTGAAAATTTTTGGAGCGTTTTCTCAGTTTTATGACCGTGGTCCGCGAGAATCGTCAATCGGATTCTGTTCTACTGTTTACTAGGAAAGATGACAGATAAAGAGAAAACGAAAGGAAAAACTTTAGAGTTGACTATAATACCATATAAATTCATATAGGATTCTAAATTTGAAAGACAAACCCTGACATGAAAAATATGTACTAGAAACTGACCAGTCTGACTTACTATACCACCAGGAAAGGTAAAAAAAACACATGTAGTTCACAAAAGATATTAAACTAGGACTTGGAAACTCGATTAGAACTAGAAAACCAGGTGAATAATTAGAGGTTGGGGATCGGGGTCTCGTATAAATATCTCGTCTCTAGTTAATCTAAAATAGTTCTAAAAATATAACAGAACAAATCTAAAACCATAGAAATACCATGAAACATAGTAATTACTAATTAGTGCTACTCCGGAATATATTCTTGTACAAAGCTATCTTTTTGAGTTCATTATATGCCTTATTTGATTATCCAGAAATGAAGACAGCAAAATGATTTGGAGTGTTGATTTCTGCACTCATAGCTTTCCAACCTTTCAGTAATTTGAATTTTAATGGACTACTGTTTCCTTTTTCCTTTCATAAAAAAGAACCGAACTGGAGTGACGTAGTGGTCAAGAAGGTCTAAGAATTAATTTCCTACAAGTTTCCTTGACTTTAAATGTTGTAGGATTAGGCGGTATGTTCTGTGACAATAGTCGAGATGAGCGCAAGCTAACCTGAATAGTCACGGATATAAATAGATAATAACATAGGGGTTAGCTTCTTTCTGACTGCTTTTTCAAGCAGCAGCTATGCTGCATACTTTTTTTTTTTAGTACAGCTATGCTGCATACTTACTTTCCCTTTAGTCCAATAATTTGTTTCTTCTCCTTTTTCTTTTTCAAAAAGCACCAAAGTATTGATTGGGCAGGACTAGGAAGACAAACTAATGAATGCTGGTCTTAGATTGCAGTTGCAGATCGAGGGTGTTAGTCGCGTACATCGGGGCAGTGTTTGTAAAAGTCGATATGTTTTTTGTAATATTGTAATCAGTGATGATGGTGTTTTACTTTTGAATCATATGTTAAGGTAAGTAAGTAAGGTGTGAACTTGGGAATGTAAGATGGGGGCTTATGGCAGAGTTTATTTTGTAATTGCCTGACAAGTCCTTGGGTGGTTTTCATTTGTCTGACTTGGTATTTAGGTTAGAATGACCTTGGGAACTAGTTCTAACATCCATACACTGCTGATGATGGGTAAAATTATGTTATCTACTCTAACTAGTTTGTTAAATATATGTTTTTATGTAGTAAAA

mRNA sequence

CAATGATTGGTCTGTGTCATCACCCACCAAACCTTTGCAGTTACTCAAACCCCAAGCTTTGTCATTTTGTCTTTCCTTCTCAAAAAAAGAAGAGTTCTTGAGAGACATAGAAACAAAAGAGAACCGTTAATTTCGGTTAATTCATGAACCAAATTTGAGAAGAAGAAGCTGCAACAACAAAAATGGTTTCAGACCAAGAGCTTTCTCAAGCTCTACAATGTCTCTTAGCTTCAAACCCTAACCCTAACCCTAACCCTTTTTCTTCCATAAACGACGTCGTTCACCAGTTGCAGTCCAAGCTTGGCCTTGATTTGTCTCATAAGCTTGATTTCATCCATGCCCAGATCCAATTCATCCTTCGTTCTCATCCTCAACAACCCCATCATCTTCTTCATCATCATCATCATCATCATCAACATCTTCATCAGCAGCAAAAAGACCTCTTTGCCCTCCATCAAAGCCCTAATTTCCCATCTGCTCCTTCCCCTACTTCCTCTGCTTTTCATATTTTTGCTGCTCAGCCTCCCCCGGTTCACCCGGAAACCGCCGTGGCTCCTGCTGTTGCCGGTTCTGACCCGCCCAAGGAGAGCACCCAGACGAAAACTAAGAGAAGAGGAGGCCCAGGGGGTCTAAATAAGCTTTGTGGTGTTTCTCCTGTACTTCAGACTATTGTGGGCCAACCAGAATTGCCAAGAACTGAGATAGTGAAACAGCTATGGGCATACATTCGAAAAAACAACCTGCAGGATCCGAGTAACAAAAGGAAAATTATATGTAATGACGAGTTGCGGTTGGTATTCGAGACAGACTGCACTGACATGTTCAAAATGAATAAGTTGTTAGCCAAACACATCATTTCTCTTGAACCTACAAAACCATCAAGTTCTAAGAAGGCACGAGTAGAGAATGAATCTTCGATTGGAGTAAAAGGTGCCGAACGGCCCGAACCTAGTAGTTGTCCTTCCATGATTATATCCGAAGCTCTTGCAAATTTTTTTGGTGTCGATGGAAGGGAGATGCTCCAATCGGAGGTTCTGACACGCATATGGGAATACATAAGATTCAATCATCTTGAGGACCCTCTAAACCCGATGGCAGTGTTGTGCGACGCGAAACTCCAGGAACTTTTTGGTTGTGAAAGCATTTCTGCACTGGGTATCCCAGAAGTCTTAGGCCGCCACCATATATTTAGGAGATCGTGATAGCTAATCTTCTAGGAATGGACTAGGAAGACAAACTAATGAATGCTGGTCTTAGATTGCAGTTGCAGATCGAGGGTGTTAGTCGCGTACATCGGGGCAGTGTTTGTAAAAGTCGATATGTTTTTTGTAATATTGTAATCAGTGATGATGGTGTTTTACTTTTGAATCATATGTTAAGGTAAGTAAGTAAGGTGTGAACTTGGGAATGTAAGATGGGGGCTTATGGCAGAGTTTATTTTGTAATTGCCTGACAAGTCCTTGGGTGGTTTTCATTTGTCTGACTTGGTATTTAGGTTAGAATGACCTTGGGAACTAGTTCTAACATCCATACACTGCTGATGATGGGTAAAATTATGTTATCTACTCTAACTAGTTTGTTAAATATATGTTTTTATGTAGTAAAA

Coding sequence (CDS)

ATGGTTTCAGACCAAGAGCTTTCTCAAGCTCTACAATGTCTCTTAGCTTCAAACCCTAACCCTAACCCTAACCCTTTTTCTTCCATAAACGACGTCGTTCACCAGTTGCAGTCCAAGCTTGGCCTTGATTTGTCTCATAAGCTTGATTTCATCCATGCCCAGATCCAATTCATCCTTCGTTCTCATCCTCAACAACCCCATCATCTTCTTCATCATCATCATCATCATCATCAACATCTTCATCAGCAGCAAAAAGACCTCTTTGCCCTCCATCAAAGCCCTAATTTCCCATCTGCTCCTTCCCCTACTTCCTCTGCTTTTCATATTTTTGCTGCTCAGCCTCCCCCGGTTCACCCGGAAACCGCCGTGGCTCCTGCTGTTGCCGGTTCTGACCCGCCCAAGGAGAGCACCCAGACGAAAACTAAGAGAAGAGGAGGCCCAGGGGGTCTAAATAAGCTTTGTGGTGTTTCTCCTGTACTTCAGACTATTGTGGGCCAACCAGAATTGCCAAGAACTGAGATAGTGAAACAGCTATGGGCATACATTCGAAAAAACAACCTGCAGGATCCGAGTAACAAAAGGAAAATTATATGTAATGACGAGTTGCGGTTGGTATTCGAGACAGACTGCACTGACATGTTCAAAATGAATAAGTTGTTAGCCAAACACATCATTTCTCTTGAACCTACAAAACCATCAAGTTCTAAGAAGGCACGAGTAGAGAATGAATCTTCGATTGGAGTAAAAGGTGCCGAACGGCCCGAACCTAGTAGTTGTCCTTCCATGATTATATCCGAAGCTCTTGCAAATTTTTTTGGTGTCGATGGAAGGGAGATGCTCCAATCGGAGGTTCTGACACGCATATGGGAATACATAAGATTCAATCATCTTGAGGACCCTCTAAACCCGATGGCAGTGTTGTGCGACGCGAAACTCCAGGAACTTTTTGGTTGTGAAAGCATTTCTGCACTGGGTATCCCAGAAGTCTTAGGCCGCCACCATATATTTAGGAGATCGTGA

Protein sequence

MVSDQELSQALQCLLASNPNPNPNPFSSINDVVHQLQSKLGLDLSHKLDFIHAQIQFILRSHPQQPHHLLHHHHHHHQHLHQQQKDLFALHQSPNFPSAPSPTSSAFHIFAAQPPPVHPETAVAPAVAGSDPPKESTQTKTKRRGGPGGLNKLCGVSPVLQTIVGQPELPRTEIVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIISLEPTKPSSSKKARVENESSIGVKGAERPEPSSCPSMIISEALANFFGVDGREMLQSEVLTRIWEYIRFNHLEDPLNPMAVLCDAKLQELFGCESISALGIPEVLGRHHIFRRS

Homology

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BLAST of Sed0026310 vs. NCBI nr
Match: XP_004150254.1 (angiomotin isoform X2 [Cucumis sativus] >KGN44294.2 hypothetical protein Csa_015454 [Cucumis sativus])

HSP 1 Score: 577.0 bits (1486), Expect = 1.1e-160
Identity = 296/345 (85.80%), Postives = 311/345 (90.14%), Query Frame = 0


Query: 1   MVSDQELSQALQCLLASNPNP-NPNPFSSINDVVHQLQSKLGLDLSHKLDFIHAQIQFIL 60
           MV+DQELSQA+QCLL  + +P NPNPFSS+N VV +LQ+KLGLDLSHKLDFIHAQIQFIL
Sbjct: 1   MVTDQELSQAIQCLLRDSASPTNPNPFSSLNAVVQELQTKLGLDLSHKLDFIHAQIQFIL 60

Query: 61  RSHPQQPHHLLHHHHHHHQHLHQQ-----QKDLFALHQSPNFPSAPSPTSSAFHIFAAQP 120
           RSHPQQPHH  HHHHHHHQ   QQ     QKDLFALHQSPNF SAPSPTSSAFH F+AQP
Sbjct: 61  RSHPQQPHHHQHHHHHHHQQQQQQQLPSSQKDLFALHQSPNFQSAPSPTSSAFHTFSAQP 120

Query: 121 PPVHPETAVAPAVAGSDPPKESTQTKTKRRGGPGGLNKLCGVSPVLQTIVGQPELPRTEI 180
           PP  P++ VAP V GSDPPKESTQTKTKRRGGPGGLNKLCGVSP LQ IVGQPELPRTEI
Sbjct: 121 PPAKPDSVVAPTVPGSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELPRTEI 180

Query: 181 VKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIISLEPTKPSS 240
           VKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHII LEPTKPSS
Sbjct: 181 VKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPTKPSS 240

Query: 241 SKKARVENESSIGVKGAERPEPSSCPSMIISEALANFFGVDGREMLQSEVLTRIWEYIRF 300
           SKKARVENES++ VK A   EPS CPS+IISEALANFFGVDGREMLQSEVL RIWEYI+ 
Sbjct: 241 SKKARVENESAVSVKSA---EPSICPSVIISEALANFFGVDGREMLQSEVLRRIWEYIKV 300

Query: 301 NHLEDPLNPMAVLCDAKLQELFGCESISALGIPEVLGRHHIFRRS 340
           NHLEDPLNPMAVLCDAKL+ELFGCESISALGIPEVLGRHHIFRRS
Sbjct: 301 NHLEDPLNPMAVLCDAKLRELFGCESISALGIPEVLGRHHIFRRS 342

[Close]

BLAST of Sed0026310 vs. NCBI nr
Match: XP_031744592.1 (angiomotin isoform X1 [Cucumis sativus])

HSP 1 Score: 572.4 bits (1474), Expect = 2.6e-159
Identity = 296/346 (85.55%), Postives = 311/346 (89.88%), Query Frame = 0


Query: 1   MVSDQELSQALQCLLASNPNP-NPNPFSSINDVVHQLQSKLGLDLSHKLDFIHAQIQFIL 60
           MV+DQELSQA+QCLL  + +P NPNPFSS+N VV +LQ+KLGLDLSHKLDFIHAQIQFIL
Sbjct: 1   MVTDQELSQAIQCLLRDSASPTNPNPFSSLNAVVQELQTKLGLDLSHKLDFIHAQIQFIL 60

Query: 61  RSHPQQPHHLLHHHHHHHQHLHQQ-----QKDLFALHQSPNFPSAPSPTSSAFHIFAAQP 120
           RSHPQQPHH  HHHHHHHQ   QQ     QKDLFALHQSPNF SAPSPTSSAFH F+AQP
Sbjct: 61  RSHPQQPHHHQHHHHHHHQQQQQQQLPSSQKDLFALHQSPNFQSAPSPTSSAFHTFSAQP 120

Query: 121 PPVHPETAVAPAVAGSDPPKE-STQTKTKRRGGPGGLNKLCGVSPVLQTIVGQPELPRTE 180
           PP  P++ VAP V GSDPPKE STQTKTKRRGGPGGLNKLCGVSP LQ IVGQPELPRTE
Sbjct: 121 PPAKPDSVVAPTVPGSDPPKESSTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELPRTE 180

Query: 181 IVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIISLEPTKPS 240
           IVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHII LEPTKPS
Sbjct: 181 IVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPTKPS 240

Query: 241 SSKKARVENESSIGVKGAERPEPSSCPSMIISEALANFFGVDGREMLQSEVLTRIWEYIR 300
           SSKKARVENES++ VK A   EPS CPS+IISEALANFFGVDGREMLQSEVL RIWEYI+
Sbjct: 241 SSKKARVENESAVSVKSA---EPSICPSVIISEALANFFGVDGREMLQSEVLRRIWEYIK 300

Query: 301 FNHLEDPLNPMAVLCDAKLQELFGCESISALGIPEVLGRHHIFRRS 340
            NHLEDPLNPMAVLCDAKL+ELFGCESISALGIPEVLGRHHIFRRS
Sbjct: 301 VNHLEDPLNPMAVLCDAKLRELFGCESISALGIPEVLGRHHIFRRS 343

[Close]

BLAST of Sed0026310 vs. NCBI nr
Match: XP_008447697.1 (PREDICTED: uncharacterized protein LOC103490111 isoform X1 [Cucumis melo] >XP_008447700.1 PREDICTED: uncharacterized protein LOC103490111 isoform X1 [Cucumis melo] >KAA0048155.1 box A-binding factor isoform X2 [Cucumis melo var. makuwa] >TYK08100.1 box A-binding factor isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 570.1 bits (1468), Expect = 1.3e-158
Identity = 294/346 (84.97%), Postives = 308/346 (89.02%), Query Frame = 0


Query: 1   MVSDQELSQALQCLLASNPNP-NPNPFSSINDVVHQLQSKLGLDLSHKLDFIHAQIQFIL 60
           MV+DQELSQA+QCLL  + +P NPNPFSS+N VV +LQ+KLGLDLSHKLDFIHAQIQFIL
Sbjct: 1   MVTDQELSQAIQCLLRDSASPTNPNPFSSLNAVVQELQTKLGLDLSHKLDFIHAQIQFIL 60

Query: 61  RSHPQQPHHLLHHHHHHHQHLHQQ------QKDLFALHQSPNFPSAPSPTSSAFHIFAAQ 120
           RSHPQQPHH  HHHHHHHQ   QQ      QKDLFALHQSPNF SAPSPTSSAFH F AQ
Sbjct: 61  RSHPQQPHHHQHHHHHHHQQQQQQQQLPSSQKDLFALHQSPNFQSAPSPTSSAFHTFTAQ 120

Query: 121 PPPVHPETAVAPAVAGSDPPKESTQTKTKRRGGPGGLNKLCGVSPVLQTIVGQPELPRTE 180
           PP    ++ VAP V GSDPPKESTQTKTKRRGGPGGLNKLCGVSP LQ IVGQPELPRTE
Sbjct: 121 PPTAKADSVVAPTVPGSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELPRTE 180

Query: 181 IVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIISLEPTKPS 240
           IVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHII LEPTKPS
Sbjct: 181 IVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPTKPS 240

Query: 241 SSKKARVENESSIGVKGAERPEPSSCPSMIISEALANFFGVDGREMLQSEVLTRIWEYIR 300
           SSKKARVENES++ VK A   EPS CPS+IISEALANFFGVDGREMLQSEVL RIWEYI+
Sbjct: 241 SSKKARVENESAVSVKSA---EPSICPSVIISEALANFFGVDGREMLQSEVLRRIWEYIK 300

Query: 301 FNHLEDPLNPMAVLCDAKLQELFGCESISALGIPEVLGRHHIFRRS 340
            NHLEDPLNPMAVLCDAKL+ELFGCESISALGIPEVLGRHHIFRRS
Sbjct: 301 VNHLEDPLNPMAVLCDAKLRELFGCESISALGIPEVLGRHHIFRRS 343

[Close]

BLAST of Sed0026310 vs. NCBI nr
Match: XP_038900174.1 (uncharacterized protein LOC120087296 isoform X2 [Benincasa hispida])

HSP 1 Score: 559.7 bits (1441), Expect = 1.7e-155
Identity = 289/340 (85.00%), Postives = 305/340 (89.71%), Query Frame = 0


Query: 1   MVSDQELSQALQCLLASNPN-PNPNPFSSINDVVHQLQSKLGLDLSHKLDFIHAQIQFIL 60
           MV+DQELSQA+QCLL  + +  NPNP SS+N VV +LQ+KLGLDLSHK+DFIHAQIQFIL
Sbjct: 1   MVTDQELSQAIQCLLRDSASATNPNPLSSLNAVVQELQTKLGLDLSHKVDFIHAQIQFIL 60

Query: 61  RSHPQQPHHLLHHHHHHHQHLHQQQKDLFALHQSPNFPSAPSPTSSAFHIFAAQPPPVHP 120
           RSHPQQPH    +HHHHHQ L   QKDLFALHQSPNF SAPSPTSSAFH F AQ PP   
Sbjct: 61  RSHPQQPH---PYHHHHHQQLPSSQKDLFALHQSPNFQSAPSPTSSAFHTFTAQLPPAKA 120

Query: 121 ETAVAPAVAGSDPPKESTQTKTKRRGGPGGLNKLCGVSPVLQTIVGQPELPRTEIVKQLW 180
           E+AV+P V GSDPPKESTQTKTKRRGGPGGLNKLCGVSP LQ IVGQPELPRTEIVKQLW
Sbjct: 121 ESAVSPTVPGSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELPRTEIVKQLW 180

Query: 181 AYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIISLEPTKPSSSKKAR 240
           AYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHII LEPTKPSSSKKAR
Sbjct: 181 AYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPTKPSSSKKAR 240

Query: 241 VENESSIGVKGAERPEPSSCPSMIISEALANFFGVDGREMLQSEVLTRIWEYIRFNHLED 300
           VENES++GVKGA   EPS CPS+IISEALANFFGVDGREMLQSEVL RIWEYI+ NHLED
Sbjct: 241 VENESAVGVKGA---EPSICPSVIISEALANFFGVDGREMLQSEVLRRIWEYIKVNHLED 300

Query: 301 PLNPMAVLCDAKLQELFGCESISALGIPEVLGRHHIFRRS 340
           PLNPMAVLCD KL+ELFGCESISALGIPEVLGRHHIFRRS
Sbjct: 301 PLNPMAVLCDGKLRELFGCESISALGIPEVLGRHHIFRRS 334

[Close]

BLAST of Sed0026310 vs. NCBI nr
Match: XP_038900172.1 (uncharacterized protein LOC120087296 isoform X1 [Benincasa hispida] >XP_038900173.1 uncharacterized protein LOC120087296 isoform X1 [Benincasa hispida])

HSP 1 Score: 555.1 bits (1429), Expect = 4.3e-154
Identity = 289/341 (84.75%), Postives = 305/341 (89.44%), Query Frame = 0


Query: 1   MVSDQELSQALQCLLASNPN-PNPNPFSSINDVVHQLQSKLGLDLSHKLDFIHAQIQFIL 60
           MV+DQELSQA+QCLL  + +  NPNP SS+N VV +LQ+KLGLDLSHK+DFIHAQIQFIL
Sbjct: 1   MVTDQELSQAIQCLLRDSASATNPNPLSSLNAVVQELQTKLGLDLSHKVDFIHAQIQFIL 60

Query: 61  RSHPQQPHHLLHHHHHHHQHLHQQQKDLFALHQSPNFPSAPSPTSSAFHIFAAQPPPVHP 120
           RSHPQQPH    +HHHHHQ L   QKDLFALHQSPNF SAPSPTSSAFH F AQ PP   
Sbjct: 61  RSHPQQPH---PYHHHHHQQLPSSQKDLFALHQSPNFQSAPSPTSSAFHTFTAQLPPAKA 120

Query: 121 ETAVAPAVAGSDPPKE-STQTKTKRRGGPGGLNKLCGVSPVLQTIVGQPELPRTEIVKQL 180
           E+AV+P V GSDPPKE STQTKTKRRGGPGGLNKLCGVSP LQ IVGQPELPRTEIVKQL
Sbjct: 121 ESAVSPTVPGSDPPKESSTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELPRTEIVKQL 180

Query: 181 WAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIISLEPTKPSSSKKA 240
           WAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHII LEPTKPSSSKKA
Sbjct: 181 WAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPTKPSSSKKA 240

Query: 241 RVENESSIGVKGAERPEPSSCPSMIISEALANFFGVDGREMLQSEVLTRIWEYIRFNHLE 300
           RVENES++GVKGA   EPS CPS+IISEALANFFGVDGREMLQSEVL RIWEYI+ NHLE
Sbjct: 241 RVENESAVGVKGA---EPSICPSVIISEALANFFGVDGREMLQSEVLRRIWEYIKVNHLE 300

Query: 301 DPLNPMAVLCDAKLQELFGCESISALGIPEVLGRHHIFRRS 340
           DPLNPMAVLCD KL+ELFGCESISALGIPEVLGRHHIFRRS
Sbjct: 301 DPLNPMAVLCDGKLRELFGCESISALGIPEVLGRHHIFRRS 335

[Close]

BLAST of Sed0026310 vs. ExPASy Swiss-Prot
Match: Q05024 (Protein TRI1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TRI1 PE=1 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 3.4e-13
Identity = 39/102 (38.24%), Postives = 65/102 (63.73%), Query Frame = 0


Query: 156 VSPVLQTIVGQPELPRTEIVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFK 215
           +S  LQ  +G  ELPRT++VK +W YI++++LQ+P ++R+I+C++++  +F    T MF 
Sbjct: 126 LSAPLQKFLGSEELPRTQVVKMIWQYIKEHDLQNPKDRREILCDEKMEPIFGKKMT-MFS 185

Query: 216 MNKLLAKHIIS-------LEPTKPSSSKKARVENESSIGVKG 251
           MNKLL KH+ +        E  K +  K+ ++ENES   + G
Sbjct: 186 MNKLLTKHLFNPDEIVKHEEEQKQTPEKEIKLENESLPNLSG 226

[Close]

BLAST of Sed0026310 vs. ExPASy Swiss-Prot
Match: O74503 (Upstream activation factor subunit spp27 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=spp27 PE=1 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 1.0e-12
Identity = 39/83 (46.99%), Postives = 53/83 (63.86%), Query Frame = 0


Query: 140 KTKRRGGPGG--LNKLCGVSPVLQTIVGQPELPRTEIVKQLWAYIRKNNLQDPSNKRKII 199
           K KR   P    LNK   +SP L   +G  +L R + VK+LW YI+ ++LQDP++KR I+
Sbjct: 105 KRKRNQDPANNPLNKPMKLSPKLAEFLGLEQLSRPQTVKKLWEYIKAHDLQDPNDKRTIL 164

Query: 200 CNDELRLVFETDCTDMFKMNKLL 221
           C+D+L+ VFE D   MF MNK L
Sbjct: 165 CDDKLKSVFEVDTLHMFTMNKYL 187

[Close]

BLAST of Sed0026310 vs. ExPASy Swiss-Prot
Match: Q08747 (Upstream activation factor subunit UAF30 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=UAF30 PE=1 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 1.3e-12
Identity = 36/78 (46.15%), Postives = 60/78 (76.92%), Query Frame = 0


Query: 156 VSPVLQTIVGQPELPRTEIVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFK 215
           +S  L +++G+ EL RTE+V++LWAYI+ +NLQ+P+NK++I+C+++L L+     T+MF+
Sbjct: 126 LSKSLASLLGEHELTRTEVVRRLWAYIKAHNLQNPNNKKEILCDEKLELILGKS-TNMFE 185

Query: 216 MNKLLAKHIISLEPTKPS 234
           M+K+LA H+   EP K S
Sbjct: 186 MHKILASHM--TEPKKIS 200

[Close]

BLAST of Sed0026310 vs. ExPASy TrEMBL
Match: A0A0A0LEG4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G758990 PE=4 SV=1)

HSP 1 Score: 577.0 bits (1486), Expect = 5.1e-161
Identity = 296/345 (85.80%), Postives = 311/345 (90.14%), Query Frame = 0


Query: 1   MVSDQELSQALQCLLASNPNP-NPNPFSSINDVVHQLQSKLGLDLSHKLDFIHAQIQFIL 60
           MV+DQELSQA+QCLL  + +P NPNPFSS+N VV +LQ+KLGLDLSHKLDFIHAQIQFIL
Sbjct: 1   MVTDQELSQAIQCLLRDSASPTNPNPFSSLNAVVQELQTKLGLDLSHKLDFIHAQIQFIL 60

Query: 61  RSHPQQPHHLLHHHHHHHQHLHQQ-----QKDLFALHQSPNFPSAPSPTSSAFHIFAAQP 120
           RSHPQQPHH  HHHHHHHQ   QQ     QKDLFALHQSPNF SAPSPTSSAFH F+AQP
Sbjct: 61  RSHPQQPHHHQHHHHHHHQQQQQQQLPSSQKDLFALHQSPNFQSAPSPTSSAFHTFSAQP 120

Query: 121 PPVHPETAVAPAVAGSDPPKESTQTKTKRRGGPGGLNKLCGVSPVLQTIVGQPELPRTEI 180
           PP  P++ VAP V GSDPPKESTQTKTKRRGGPGGLNKLCGVSP LQ IVGQPELPRTEI
Sbjct: 121 PPAKPDSVVAPTVPGSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELPRTEI 180

Query: 181 VKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIISLEPTKPSS 240
           VKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHII LEPTKPSS
Sbjct: 181 VKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPTKPSS 240

Query: 241 SKKARVENESSIGVKGAERPEPSSCPSMIISEALANFFGVDGREMLQSEVLTRIWEYIRF 300
           SKKARVENES++ VK A   EPS CPS+IISEALANFFGVDGREMLQSEVL RIWEYI+ 
Sbjct: 241 SKKARVENESAVSVKSA---EPSICPSVIISEALANFFGVDGREMLQSEVLRRIWEYIKV 300

Query: 301 NHLEDPLNPMAVLCDAKLQELFGCESISALGIPEVLGRHHIFRRS 340
           NHLEDPLNPMAVLCDAKL+ELFGCESISALGIPEVLGRHHIFRRS
Sbjct: 301 NHLEDPLNPMAVLCDAKLRELFGCESISALGIPEVLGRHHIFRRS 342

[Close]

BLAST of Sed0026310 vs. ExPASy TrEMBL
Match: A0A1S3BI07 (uncharacterized protein LOC103490111 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103490111 PE=4 SV=1)

HSP 1 Score: 570.1 bits (1468), Expect = 6.2e-159
Identity = 294/346 (84.97%), Postives = 308/346 (89.02%), Query Frame = 0


Query: 1   MVSDQELSQALQCLLASNPNP-NPNPFSSINDVVHQLQSKLGLDLSHKLDFIHAQIQFIL 60
           MV+DQELSQA+QCLL  + +P NPNPFSS+N VV +LQ+KLGLDLSHKLDFIHAQIQFIL
Sbjct: 1   MVTDQELSQAIQCLLRDSASPTNPNPFSSLNAVVQELQTKLGLDLSHKLDFIHAQIQFIL 60

Query: 61  RSHPQQPHHLLHHHHHHHQHLHQQ------QKDLFALHQSPNFPSAPSPTSSAFHIFAAQ 120
           RSHPQQPHH  HHHHHHHQ   QQ      QKDLFALHQSPNF SAPSPTSSAFH F AQ
Sbjct: 61  RSHPQQPHHHQHHHHHHHQQQQQQQQLPSSQKDLFALHQSPNFQSAPSPTSSAFHTFTAQ 120

Query: 121 PPPVHPETAVAPAVAGSDPPKESTQTKTKRRGGPGGLNKLCGVSPVLQTIVGQPELPRTE 180
           PP    ++ VAP V GSDPPKESTQTKTKRRGGPGGLNKLCGVSP LQ IVGQPELPRTE
Sbjct: 121 PPTAKADSVVAPTVPGSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELPRTE 180

Query: 181 IVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIISLEPTKPS 240
           IVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHII LEPTKPS
Sbjct: 181 IVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPTKPS 240

Query: 241 SSKKARVENESSIGVKGAERPEPSSCPSMIISEALANFFGVDGREMLQSEVLTRIWEYIR 300
           SSKKARVENES++ VK A   EPS CPS+IISEALANFFGVDGREMLQSEVL RIWEYI+
Sbjct: 241 SSKKARVENESAVSVKSA---EPSICPSVIISEALANFFGVDGREMLQSEVLRRIWEYIK 300

Query: 301 FNHLEDPLNPMAVLCDAKLQELFGCESISALGIPEVLGRHHIFRRS 340
            NHLEDPLNPMAVLCDAKL+ELFGCESISALGIPEVLGRHHIFRRS
Sbjct: 301 VNHLEDPLNPMAVLCDAKLRELFGCESISALGIPEVLGRHHIFRRS 343

[Close]

BLAST of Sed0026310 vs. ExPASy TrEMBL
Match: A0A5D3C9T5 (Box A-binding factor isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold265G002610 PE=4 SV=1)

HSP 1 Score: 570.1 bits (1468), Expect = 6.2e-159
Identity = 294/346 (84.97%), Postives = 308/346 (89.02%), Query Frame = 0


Query: 1   MVSDQELSQALQCLLASNPNP-NPNPFSSINDVVHQLQSKLGLDLSHKLDFIHAQIQFIL 60
           MV+DQELSQA+QCLL  + +P NPNPFSS+N VV +LQ+KLGLDLSHKLDFIHAQIQFIL
Sbjct: 1   MVTDQELSQAIQCLLRDSASPTNPNPFSSLNAVVQELQTKLGLDLSHKLDFIHAQIQFIL 60

Query: 61  RSHPQQPHHLLHHHHHHHQHLHQQ------QKDLFALHQSPNFPSAPSPTSSAFHIFAAQ 120
           RSHPQQPHH  HHHHHHHQ   QQ      QKDLFALHQSPNF SAPSPTSSAFH F AQ
Sbjct: 61  RSHPQQPHHHQHHHHHHHQQQQQQQQLPSSQKDLFALHQSPNFQSAPSPTSSAFHTFTAQ 120

Query: 121 PPPVHPETAVAPAVAGSDPPKESTQTKTKRRGGPGGLNKLCGVSPVLQTIVGQPELPRTE 180
           PP    ++ VAP V GSDPPKESTQTKTKRRGGPGGLNKLCGVSP LQ IVGQPELPRTE
Sbjct: 121 PPTAKADSVVAPTVPGSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELPRTE 180

Query: 181 IVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIISLEPTKPS 240
           IVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHII LEPTKPS
Sbjct: 181 IVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPTKPS 240

Query: 241 SSKKARVENESSIGVKGAERPEPSSCPSMIISEALANFFGVDGREMLQSEVLTRIWEYIR 300
           SSKKARVENES++ VK A   EPS CPS+IISEALANFFGVDGREMLQSEVL RIWEYI+
Sbjct: 241 SSKKARVENESAVSVKSA---EPSICPSVIISEALANFFGVDGREMLQSEVLRRIWEYIK 300

Query: 301 FNHLEDPLNPMAVLCDAKLQELFGCESISALGIPEVLGRHHIFRRS 340
            NHLEDPLNPMAVLCDAKL+ELFGCESISALGIPEVLGRHHIFRRS
Sbjct: 301 VNHLEDPLNPMAVLCDAKLRELFGCESISALGIPEVLGRHHIFRRS 343

[Close]

BLAST of Sed0026310 vs. ExPASy TrEMBL
Match: A0A6J1FLX5 (uncharacterized protein LOC111446611 OS=Cucurbita moschata OX=3662 GN=LOC111446611 PE=4 SV=1)

HSP 1 Score: 550.1 bits (1416), Expect = 6.7e-153
Identity = 289/341 (84.75%), Postives = 302/341 (88.56%), Query Frame = 0


Query: 1   MVSDQELSQALQCLLASNPNP-NPNPFSSINDVVHQLQSKLGLDLSHKLDFIHAQIQFIL 60
           MVSDQELS+ALQCLL  + +P NPNPFSS+N VV +LQSKLGLDLSHK+DFIHAQIQ IL
Sbjct: 1   MVSDQELSEALQCLLRDSASPSNPNPFSSLNAVVLELQSKLGLDLSHKVDFIHAQIQLIL 60

Query: 61  RSHPQQPHHLLHHHHHHHQHLHQQQKDLFALHQSPNFPSAPSPTSSAFHIFAAQPPPVHP 120
           RSHPQQP    +HHH   Q     QKD+   HQSPNFPSAPSPTSSAFH F AQPPP  P
Sbjct: 61  RSHPQQPQIHQNHHHQQQQPPPSSQKDILPPHQSPNFPSAPSPTSSAFHTFTAQPPPAKP 120

Query: 121 ETAVAPAVA-GSDPPKESTQTKTKRRGGPGGLNKLCGVSPVLQTIVGQPELPRTEIVKQL 180
           ETA AP+ A GSDPPKESTQTKTKRRGGPGGLNKLCGVSP LQTIVGQPELPRTEIVKQL
Sbjct: 121 ETAAAPSTAVGSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQTIVGQPELPRTEIVKQL 180

Query: 181 WAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIISLEPTKPSSSKKA 240
           WAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIISLEPTKPSSSKKA
Sbjct: 181 WAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIISLEPTKPSSSKKA 240

Query: 241 RVENESSIGVKGAERPEPSSCPSMIISEALANFFGVDGREMLQSEVLTRIWEYIRFNHLE 300
           RVE+E +I VK A   EPS CPS+IISEALA+FFGVDGREMLQSEVL RIWEYIR NHLE
Sbjct: 241 RVESEPAIAVKAA---EPSVCPSVIISEALASFFGVDGREMLQSEVLRRIWEYIRANHLE 300

Query: 301 DPLNPMAVLCDAKLQELFGCESISALGIPEVLGRHHIFRRS 340
           DPLNPMAVLCDAKLQELFGCESISALGIPEVLGRHHIFRRS
Sbjct: 301 DPLNPMAVLCDAKLQELFGCESISALGIPEVLGRHHIFRRS 338

[Close]

BLAST of Sed0026310 vs. ExPASy TrEMBL
Match: A0A6J1J2D3 (uncharacterized protein LOC111480626 OS=Cucurbita maxima OX=3661 GN=LOC111480626 PE=4 SV=1)

HSP 1 Score: 548.5 bits (1412), Expect = 1.9e-152
Identity = 289/341 (84.75%), Postives = 302/341 (88.56%), Query Frame = 0


Query: 1   MVSDQELSQALQCLLASNPNP-NPNPFSSINDVVHQLQSKLGLDLSHKLDFIHAQIQFIL 60
           MVS+QELS+ALQCLL  + +P NPNPFSS+N VV +LQSKLGLDLSHK+DFIHAQIQ IL
Sbjct: 1   MVSEQELSEALQCLLRDSASPSNPNPFSSLNAVVLELQSKLGLDLSHKVDFIHAQIQLIL 60

Query: 61  RSHPQQPHHLLHHHHHHHQHLHQQQKDLFALHQSPNFPSAPSPTSSAFHIFAAQPPPVHP 120
           RSHPQQP    +HH+   Q     QKDL   HQSPNFPSAPSPTSSAFH F AQPPP  P
Sbjct: 61  RSHPQQPQIHQNHHNQQQQPPPSSQKDLLPPHQSPNFPSAPSPTSSAFHTFTAQPPPAKP 120

Query: 121 ETAVAPAVA-GSDPPKESTQTKTKRRGGPGGLNKLCGVSPVLQTIVGQPELPRTEIVKQL 180
           ETA AP+ A GSDPPKESTQTKTKRRGGPGGLNKLCGVSP LQTIVGQPELPRTEIVKQL
Sbjct: 121 ETAAAPSTAVGSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQTIVGQPELPRTEIVKQL 180

Query: 181 WAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIISLEPTKPSSSKKA 240
           WAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIISLEPTKPSSSKKA
Sbjct: 181 WAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIISLEPTKPSSSKKA 240

Query: 241 RVENESSIGVKGAERPEPSSCPSMIISEALANFFGVDGREMLQSEVLTRIWEYIRFNHLE 300
           RVENE +I VK A   EPS CPS+IISEALA+FFGVDGREMLQSEVL RIWEYIR NHLE
Sbjct: 241 RVENEPAIAVKAA---EPSVCPSVIISEALASFFGVDGREMLQSEVLRRIWEYIRANHLE 300

Query: 301 DPLNPMAVLCDAKLQELFGCESISALGIPEVLGRHHIFRRS 340
           DPLNPMAVLCDAKLQELFGCESISALGIPEVLGRHHIFRRS
Sbjct: 301 DPLNPMAVLCDAKLQELFGCESISALGIPEVLGRHHIFRRS 338

[Close]

BLAST of Sed0026310 vs. TAIR 10
Match: AT4G22360.1 (SWIB complex BAF60b domain-containing protein )

HSP 1 Score: 282.7 bits (722), Expect = 3.8e-76
Identity = 179/394 (45.43%), Postives = 238/394 (60.41%), Query Frame = 0


Query: 1   MVSDQELSQALQCLLASNPNPNPNPFSSINDVVHQLQSKLGLDLSHKLDFIHAQIQFILR 60
           MVSDQ+L++ ++ LL  +   +P+  +S++ +V QL++KLGLDL+ K  FI  QI  +LR
Sbjct: 1   MVSDQDLAKGVETLLRQS---DPSSLTSLSSIVQQLEAKLGLDLTEKTTFIRDQINILLR 60

Query: 61  SHP------------QQPHHLLHHHHHHHQHLHQ------QQKDLFAL---------HQS 120
           +H             QQ H       H  Q+LH         K  F L          QS
Sbjct: 61  AHQNPSASVASASSVQQSHPPPPPSSHQQQNLHSGVNVPPMAKGHFTLSHPSQFSVSSQS 120

Query: 121 PNFPS--APSPTSSAFHIFAAQPPPV------HPETAVAP---------------AVAGS 180
             +PS  A  P   ++ +   QP PV      H     +P               +++ +
Sbjct: 121 QQYPSHFALQPPYHSYDLNFRQPYPVYMPPQQHQHQQQSPRQQQSSVMLSHGGNASLSVN 180

Query: 181 DPPKESTQTKTKRRGGPGGLNKLCGVSPVLQTIVGQPELPRTEIVKQLWAYIRKNNLQDP 240
             PKES    TKR+GGPGGLNK+C VSP L+ +VG+P LPRTEIV+QLWAYIRKNNLQDP
Sbjct: 181 QAPKESAPAGTKRKGGPGGLNKVCRVSPELEVVVGEPALPRTEIVRQLWAYIRKNNLQDP 240

Query: 241 SNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIISLEPTKPS-SSKKARVENESSIGVK 300
           SNKRKIIC+D LR+VFETDCTDMFKMNKLLAKHI+ L+P+K S  +KKA+ E E+     
Sbjct: 241 SNKRKIICDDALRVVFETDCTDMFKMNKLLAKHILPLDPSKDSGQAKKAKTEVETK---- 300

Query: 301 GAERPEPSS----CPSMIISEALANFFGVDGREMLQSEVLTRIWEYIRFNHLEDPLNPMA 340
             E  EP S      ++ +SE L  FFG    EM   E++ R+WEYI+ N+LEDP+NPMA
Sbjct: 301 -TETTEPISSTAISSTVTLSEPLGKFFGTGETEMADEEIIRRVWEYIKLNNLEDPVNPMA 360

[Close]

BLAST of Sed0026310 vs. TAIR 10
Match: AT3G19080.1 (SWIB complex BAF60b domain-containing protein )

HSP 1 Score: 150.6 bits (379), Expect = 2.3e-36
Identity = 82/212 (38.68%), Postives = 118/212 (55.66%), Query Frame = 0


Query: 133 PKESTQTKTKRRGGPGGLNKLCGVSPVLQTIVGQPELPRTEIVKQLWAYIRKNNLQDPSN 192
           P +S + K KR+GG GG  K+C +SP LQ   G  EL RTE+VK LW YI++NNLQDP++
Sbjct: 249 PAKSVE-KPKRKGG-GGFAKVCSLSPELQAFTGVTELARTEVVKLLWKYIKENNLQDPND 308

Query: 193 KRKIICNDELRLVFETDCTDMFKMNKLLAKHIISLEPTKPSSSKKARVENESSIGVKGAE 252
           KR IIC++  R +F  +  +MF+MNK L KHI  LE     S      +N         +
Sbjct: 309 KRSIICDESFRSLFPVESINMFQMNKQLTKHIWPLEDNAGESVSSKSPKNGKQKMESDGD 368

Query: 253 RPEPSS---------CPSMIISEALANFFGVDGREMLQSEVLTRIWEYIRFNHLEDPLNP 312
             EP+             + +S+AL  F G     + +++V+ R+WEYI  N L+DP + 
Sbjct: 369 SEEPNEKDKKQKKEVLAPLPLSDALVKFLGDGENSLSRADVVKRLWEYINHNDLQDPSDK 428

Query: 313 MAVLCDAKLQELFGCESISALGIPEVLGRHHI 336
             V+CD KL+ELF  +S     + ++L  H I
Sbjct: 429 RRVICDEKLKELFEVDSFEDTSVSKLLTNHFI 458

[Close]

BLAST of Sed0026310 vs. TAIR 10
Match: AT1G49520.1 (SWIB complex BAF60b domain-containing protein )

HSP 1 Score: 131.7 bits (330), Expect = 1.1e-30
Identity = 74/245 (30.20%), Postives = 128/245 (52.24%), Query Frame = 0


Query: 130 SDPPKESTQTKTKRRGGPGGLNKLCGVSPVLQTIVGQPELPRTEIVKQLWAYIRKNNLQD 189
           +D  K     K K+RG  GG NK+C +SP L+  +G  +L RTE+VK++WAYIR+++LQD
Sbjct: 84  NDDDKTELPVKAKKRG--GGFNKICQLSPQLEKFLGTSQLARTEVVKKMWAYIREHDLQD 143

Query: 190 PSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHI------------------------- 249
           P+N+R I+C++ L  +F     +MF+MNK LAKHI                         
Sbjct: 144 PTNRRNILCDESLHSLFRVKTINMFQMNKALAKHIWALNDGDGCFKNVKEEDVDETSGER 203

Query: 250 ----ISLEPTKPSSSKKARVENESSIGVKGAERPEPSSCPS------------MIISEAL 309
               + +E    ++ +++R E + S+  +  ++ +P+                  +S  L
Sbjct: 204 DEKDVKIEEALENNEEESREEEDRSVRKRKRKKRKPAKSEEKPKKKGGGFTKVCSLSPEL 263

Query: 310 ANFFGVDGREMLQSEVLTRIWEYIRFNHLEDPLNPMAVLCDAKLQELFGCESISALGIPE 334
             F G    ++ ++EV+  +W+YI+ N+L+DP +   ++CD  L+ LF  ESI+   + +
Sbjct: 264 QAFTGTP--QLARTEVVKMLWKYIKENNLQDPSDKRTIICDESLRSLFPVESINMFQMNK 323

[Close]

BLAST of Sed0026310 vs. TAIR 10
Match: AT4G34290.1 (SWIB/MDM2 domain superfamily protein )

HSP 1 Score: 78.6 bits (192), Expect = 1.1e-14
Identity = 45/122 (36.89%), Postives = 73/122 (59.84%), Query Frame = 0


Query: 105 SAFHIFAAQPPPVHPETAVAPAVAGSDPPKESTQTKTKRRGGPGGLNKLCGVSPVLQTIV 164
           S+  +    P  +    AV  A A S  P  +T TKT+    P G+ K   VS  +Q +V
Sbjct: 28  SSLRLSPNHPTNLRMVRAVTSAAAASSDP--TTTTKTRE---PRGIMKPRPVSQAMQDVV 87

Query: 165 GQPELPRTEIVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFE-TDCTDMFKMNKLLAKH 224
           G PE+PRT+ +K++WAYI++++LQDP NKR I+C+++L+ +FE  +     ++ KL+  H
Sbjct: 88  GVPEIPRTQALKRIWAYIKEHDLQDPQNKRDILCDEKLKKIFEGKERVGFLEIAKLIGPH 144

Query: 225 II 226
            +
Sbjct: 148 FL 144

[Close]

BLAST of Sed0026310 vs. TAIR 10
Match: AT2G14880.1 (SWIB/MDM2 domain superfamily protein )

HSP 1 Score: 75.1 bits (183), Expect = 1.2e-13
Identity = 41/109 (37.61%), Postives = 67/109 (61.47%), Query Frame = 0


Query: 118 HPETAVAPAVAGSDPPKESTQTKTKRRGGPGGLNKLCGVSPVLQTIVGQPELPRTEIVKQ 177
           HP   +    A +   + S  T T +R  P G+ K   VSP +Q IV  PE+ RT+ +K+
Sbjct: 34  HPAAKLRLVRAVTSATESSEPTATNKR-VPRGIMKPRPVSPEMQDIVELPEIARTQALKR 93

Query: 178 LWAYIRKNNLQDPSNKRKIICNDELRLVFE-TDCTDMFKMNKLLAKHII 226
           +WAYI++++LQDP NKR+I+C+++L+ +FE  D     ++ KL+  H +
Sbjct: 94  IWAYIKEHDLQDPQNKREILCDEKLKKIFEGRDRVGFLEIAKLIGPHFL 141

The following BLAST results are available for this feature:

BLAST of Sed0026310 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004150254.1	1.1e-160	85.80	angiomotin isoform X2 [Cucumis sativus] >KGN44294.2 hypothetical protein Csa_015...	[more]
XP_031744592.1	2.6e-159	85.55	angiomotin isoform X1 [Cucumis sativus]	[more]
XP_008447697.1	1.3e-158	84.97	PREDICTED: uncharacterized protein LOC103490111 isoform X1 [Cucumis melo] >XP_00...	[more]
XP_038900174.1	1.7e-155	85.00	uncharacterized protein LOC120087296 isoform X2 [Benincasa hispida]	[more]
XP_038900172.1	4.3e-154	84.75	uncharacterized protein LOC120087296 isoform X1 [Benincasa hispida] >XP_03890017...	[more]

BLAST of Sed0026310 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q05024	3.4e-13	38.24	Protein TRI1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 ...	[more]
O74503	1.0e-12	46.99	Upstream activation factor subunit spp27 OS=Schizosaccharomyces pombe (strain 97...	[more]
Q08747	1.3e-12	46.15	Upstream activation factor subunit UAF30 OS=Saccharomyces cerevisiae (strain ATC...	[more]

BLAST of Sed0026310 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LEG4	5.1e-161	85.80	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G758990 PE=4 SV=1	[more]
A0A1S3BI07	6.2e-159	84.97	uncharacterized protein LOC103490111 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A5D3C9T5	6.2e-159	84.97	Box A-binding factor isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A6J1FLX5	6.7e-153	84.75	uncharacterized protein LOC111446611 OS=Cucurbita moschata OX=3662 GN=LOC1114466...	[more]
A0A6J1J2D3	1.9e-152	84.75	uncharacterized protein LOC111480626 OS=Cucurbita maxima OX=3661 GN=LOC111480626...	[more]

BLAST of Sed0026310 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G22360.1	3.8e-76	45.43	SWIB complex BAF60b domain-containing protein	[more]
AT3G19080.1	2.3e-36	38.68	SWIB complex BAF60b domain-containing protein	[more]
AT1G49520.1	1.1e-30	30.20	SWIB complex BAF60b domain-containing protein	[more]
AT4G34290.1	1.1e-14	36.89	SWIB/MDM2 domain superfamily protein	[more]
AT2G14880.1	1.2e-13	37.61	SWIB/MDM2 domain superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019835	SWIB domain	SMART	SM00151	swib_2	coord: 258..339 e-value: 9.2E-7 score: 38.5 coord: 150..229 e-value: 3.8E-42 score: 156.0
IPR014876	DEK, C-terminal	PFAM	PF08766	DEK_C	coord: 2..58 e-value: 2.0E-6 score: 27.6
IPR036885	SWIB/MDM2 domain superfamily	GENE3D	1.10.245.10	SWIB/MDM2 domain	coord: 257..338 e-value: 3.8E-19 score: 70.3 coord: 145..235 e-value: 8.4E-29 score: 101.3
IPR036885	SWIB/MDM2 domain superfamily	SUPERFAMILY	47592	SWIB/MDM2 domain	coord: 262..334
IPR036885	SWIB/MDM2 domain superfamily	SUPERFAMILY	47592	SWIB/MDM2 domain	coord: 143..229
IPR003121	SWIB/MDM2 domain	PFAM	PF02201	SWIB	coord: 263..333 e-value: 6.9E-18 score: 64.3 coord: 154..224 e-value: 8.1E-27 score: 92.9
IPR003121	SWIB/MDM2 domain	PROSITE	PS51925	SWIB_MDM2	coord: 257..336 score: 18.36175
IPR003121	SWIB/MDM2 domain	PROSITE	PS51925	SWIB_MDM2	coord: 149..226 score: 21.774237
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 232..256
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 118..152
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 234..248
None	No IPR available	PANTHER	PTHR13844	SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY D	coord: 1..335
None	No IPR available	PANTHER	PTHR13844:SF62	SUBFAMILY NOT NAMED	coord: 1..335
None	No IPR available	CDD	cd10567	SWIB-MDM2_like	coord: 154..224 e-value: 1.91301E-38 score: 129.586
None	No IPR available	CDD	cd10567	SWIB-MDM2_like	coord: 262..333 e-value: 3.21464E-18 score: 76.0429

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0026310.1	Sed0026310.1	mRNA
Sed0026310.2	Sed0026310.2	mRNA
Sed0026310.3	Sed0026310.3	mRNA
Sed0026310.4	Sed0026310.4	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus