Sed0026302 (gene) Chayote v1

Overview


Name	Sed0026302
Type	gene
Organism	Sechium edule (Chayote v1)
Description	GATA-N domain-containing protein
Location	LG04: 2530977 .. 2534669 (+)
RNA-Seq Expression	Sed0026302
Synteny	Sed0026302

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GACTGATTGGACAAAAAAACACACCATTTACATATGAATAACTAACTTTCGCATATTAAATTCGCAAGCAATACCGAACGAGAAAAATTATCTTTTAGGTTTTATCAAACTATAGAGACTATATGCTAAACCAGGTAGATTAAATTCTAATTTTCTTTAAATCATATGGGTCATCAAGCCATTAAACCACTAAGCCCTAACTTGTGTCCCCACACAAACATGTGGATCCTAAATTTAAAGCTCCCATCTCATTCACAACCATAAATTAAGTGTCAAACAAATTCCAAGGATTCATAACCTAGCAAAAAAGAAGTGGCATTCCTAATGGATACTAGAACAACAATAATAACAACAAAACAATCAAATGGCCCTAGAAGACCGAGAGATCAAGAGTATCAAACACAACCACGTAGCTTCATAGCAACCACACCGCCCAATCTCCGCCTACCACTAGCATTCACTTACCTTTAAAACAGAGCAACTCCGCTGATTCTTCGAATCCGAGCCCTAATCAACCGAACTAACCGGCGGCGGTGGAGGAAGCGATGGTGGCGATTTGTCCGCCGCACGGCGGATTTCCGTCGCAATTAGGGCAGGGATTGAAGGCGGCTAGGGTTAGGCAAACTGGCCGGGGATTCAATTTGAGAGTGGCGGCGGAGAAGGGCGAGGGGAGAGAAGAAGGCGGCGGCGGCGGCGGAAGGGAGGAGAAGAAGTCGCTGTTCAGCAGCGTGACGGAGGCGTTGGATTTCTCTCAGGTCCGATCGAGTCGCGACGCTGAGCTTCTCGATGACGCCCGTCAGGCCACCAAATCCGGCGGTAGAATGACCCGCGAACAGGTATATATCTCAGTTACAGTGAATTTACTATTTTTTTTTTTTTTTTGAGAAACGTGAATTTACTAATTTAAAATATATTAACAAATGATGATGTATATTAAAAAAAAAAACAAAATAATTATATATATACCATATTTATCGAATTTATTGATTTGTGGTATAAAAATAATTGAAATCTATCGATTTGCACGGTTCAATTACTCAAAATTGGTTGAAGTCTATTAGTTGAACTAATAGAAATCTATTAGTTGAACTGATTGAAGTCTAAAGTCAATCAATGAAACTAATAGAAACCTATTAGTTGAATTGATTGAAATTTATCAGTTGAACTAATTGAAGTCTATCAGTTGAACTTATTGAAGTCTAAAATCTGTCAATAAACTAATAGAAGTCTAATGATATTAATTAAATATTTTAAACAAAATATGCTATGAATAAAATTATTTTTAAAAATGTGCTACAATTATAACGGATAGCAAAAAAATATTATAAAAGGACAAATTTTTTAATTAAATATTAATTTTCAAGATTTTTTGCATCACCGTGGTATTAAACGAATTACTATCGAACAATAATTATTGGATCACGTTTATTTTTTTGGGTATTTATACAACATTATTGGATAGTTGGAGATTTCAAATTGAAATACTCAAGGAATATAGTAATACATATAAATGTTAATTAGGATACTTTATTAATGATAAAAAATATTTCACTTTTCGAATATATAAAAACCTCATTATATGTAATCTAGATTATATGTTGATGATACATGGATAATTACCGCTATGCTAAATTGACTTTTATATGATACATAAGATTTGAATTATGTTTGATATAAGTATATAATCCATAAATTATTAGTAAGTAGTTGTTCTCAACTAAACAAACCCTTTTAGATGTTGCTGAATTAAAAAAATTAATCTCTAAATATTTTAGTTTAGCTATAAACATTTAAATGTTGTCTAATAAGGTGAAGTTAAAATTTTGTGTGTTATATTGAGATTTTGAATCTTGAATATTTTTATTAATAGGTTTGTAAAATTTTACAAACTTCCAATAAGCTAGGAATTTATAAAAACACATAGTTGAACTTCATGAACTTATAACTATTATTTTACTTTAACTATTTTTTTTATTGGACACGAAAACTTTTTAAGGGTTTTTGCATGTATATTAAAAAAATGAATAAAATAATTCCATGTATAACACAATTCCCAAACTTATTCATTTATGGCACAAAAGTGATTGAAGTCTATCGGTTGAACTGATAGAAGTCTAAAATCTATCAATTGAAACCTATTAGTTGACCGATAGAAGTCTATCAATTGAATTGATAGAAGTCTAAAGTCTATCAGTTGAACTGATAGAAATCTAAAATCCATCCGTTAACTTGATAGAAGTCTAAATAGGAATTTTCAGCAAAATGTACTATGAATAAAATTATTTTTAAAAATGGGTTACAATTGTAATGAAGAGCAAAAAATATACTATGGAGGATAAATTCCCAAAGTATTATTACAAAGGGATTTTGCATGTATATTAAAAAATAAAAAATTCCATGTATAGCACAATTCCCAAAGTTATTCATTTGTGGCACAAAAATAATTGAAGTTTATCAATTTGCATTGTTCAATCACTCAAAATCAATTAAAGTCTATCAGTTGAATTGATAGAAGTCTAAAGTCTATCGGTTAAACTGATAAAAGTCTATTAGTTGAAGCGATAGAAGTCTATCAATTGAATTGATAGAAATCTAAAGTCTATCAATTGAACTGATAGAAGTCTGATGATGTTAGAATAACAATTTTGGACAAAATGTGTTATGGATGAAATTATTTTTAAAAAATGTGCTATGGATAAAATTATTTTTAAAAAATGTGTTATAATTATAATGAATAGCCAAAAATATGTTATGGAGGATAAATTCCCGAACTTTTTATTTGGTGTATGTGAAAAGGTTCAAATACTATATCAAAACAAGTTGCATATTACTTTTCAAAAATGATTTTTTAATTATGTAATTCTAACGTTGGCAAATAATGCCCATCATTGATCTTTAACATAAATAGTTAGGATCAATATAATAGTATCTTACATCTTTTTTTTGAAACCTAGTATCTTTACATCTTCAATATAAAAACAAAATGAATTATTTCTAAAATCTTGAAAATTAATATTAATTGAGGAAATAAATTTATATTCTTATCCACATTAAATCTTCAATCAACTTAAAAATTATAAATTCATGAATTACTTAAAACTTTATCCAAACTAATATTCTTCAACCAACTAGTAAAATTATTTTGGTGGTGGTAATTGCCTAAAATTGGCTAACATCATCTATTAATGGATGTAGTATGGAGCTCTAAAGAGGAAGATAGGAGGAACGTACAAGGATTTCTTCAAATCTTACATAGAAGGTACGTTTCAAATTAATAATTTCACTAAATAAAAGCTTTAAAATTTTATGCTAACTCATGTTCAAAAATTGATGATAAATTTTGGGTTTTGATTAAAAAAAAAGTGGATGGGAAATATGTTGAGGAAGGGTGGGTGGACAAGACATGCAAGGTGTGCAAAAAGGACACAAAAGGAGAGGCAAGACAAGTTGATAAACTTGGAAGATATGTTCATGTTGCTTGTTTGGAGAAATCCAACTCTTCCTCAGGAAATTTCTTCTCCAAATTCTTCTCGAGATAAGATAGTCGAGTTACGTGTTAATTCGATCGTATAAACTTTAATTTGTATGACTTGTATTTAGTTTATAAAGTTTATCACAATGTATATGTAAAAGTTAGATTTGTAGCACTTTGAGTTTATTTATCGATTGTGGGATGAAAAGTTTTGGTTTGGG

mRNA sequence

GACTGATTGGACAAAAAAACACACCATTTACATATGAATAACTAACTTTCGCATATTAAATTCGCAAGCAATACCGAACGAGAAAAATTATCTTTTAGGTTTTATCAAACTATAGAGACTATATGCTAAACCAGGTAGATTAAATTCTAATTTTCTTTAAATCATATGGGTCATCAAGCCATTAAACCACTAAGCCCTAACTTGTGTCCCCACACAAACATGTGGATCCTAAATTTAAAGCTCCCATCTCATTCACAACCATAAATTAAGTGTCAAACAAATTCCAAGGATTCATAACCTAGCAAAAAAGAAGTGGCATTCCTAATGGATACTAGAACAACAATAATAACAACAAAACAATCAAATGGCCCTAGAAGACCGAGAGATCAAGAGTATCAAACACAACCACGTAGCTTCATAGCAACCACACCGCCCAATCTCCGCCTACCACTAGCATTCACTTACCTTTAAAACAGAGCAACTCCGCTGATTCTTCGAATCCGAGCCCTAATCAACCGAACTAACCGGCGGCGGTGGAGGAAGCGATGGTGGCGATTTGTCCGCCGCACGGCGGATTTCCGTCGCAATTAGGGCAGGGATTGAAGGCGGCTAGGGTTAGGCAAACTGGCCGGGGATTCAATTTGAGAGTGGCGGCGGAGAAGGGCGAGGGGAGAGAAGAAGGCGGCGGCGGCGGCGGAAGGGAGGAGAAGAAGTCGCTGTTCAGCAGCGTGACGGAGGCGTTGGATTTCTCTCAGGTCCGATCGAGTCGCGACGCTGAGCTTCTCGATGACGCCCGTCAGGCCACCAAATCCGGCGGTAGAATGACCCGCGAACAGTATGGAGCTCTAAAGAGGAAGATAGGAGGAACGTACAAGGATTTCTTCAAATCTTACATAGAAGTGGATGGGAAATATGTTGAGGAAGGGTGGGTGGACAAGACATGCAAGGTGTGCAAAAAGGACACAAAAGGAGAGGCAAGACAAGTTGATAAACTTGGAAGATATGTTCATGTTGCTTGTTTGGAGAAATCCAACTCTTCCTCAGGAAATTTCTTCTCCAAATTCTTCTCGAGATAAGATAGTCGAGTTACGTGTTAATTCGATCGTATAAACTTTAATTTGTATGACTTGTATTTAGTTTATAAAGTTTATCACAATGTATATGTAAAAGTTAGATTTGTAGCACTTTGAGTTTATTTATCGATTGTGGGATGAAAAGTTTTGGTTTGGG

Coding sequence (CDS)

ATGGTGGCGATTTGTCCGCCGCACGGCGGATTTCCGTCGCAATTAGGGCAGGGATTGAAGGCGGCTAGGGTTAGGCAAACTGGCCGGGGATTCAATTTGAGAGTGGCGGCGGAGAAGGGCGAGGGGAGAGAAGAAGGCGGCGGCGGCGGCGGAAGGGAGGAGAAGAAGTCGCTGTTCAGCAGCGTGACGGAGGCGTTGGATTTCTCTCAGGTCCGATCGAGTCGCGACGCTGAGCTTCTCGATGACGCCCGTCAGGCCACCAAATCCGGCGGTAGAATGACCCGCGAACAGTATGGAGCTCTAAAGAGGAAGATAGGAGGAACGTACAAGGATTTCTTCAAATCTTACATAGAAGTGGATGGGAAATATGTTGAGGAAGGGTGGGTGGACAAGACATGCAAGGTGTGCAAAAAGGACACAAAAGGAGAGGCAAGACAAGTTGATAAACTTGGAAGATATGTTCATGTTGCTTGTTTGGAGAAATCCAACTCTTCCTCAGGAAATTTCTTCTCCAAATTCTTCTCGAGATAA

Protein sequence

MVAICPPHGGFPSQLGQGLKAARVRQTGRGFNLRVAAEKGEGREEGGGGGGREEKKSLFSSVTEALDFSQVRSSRDAELLDDARQATKSGGRMTREQYGALKRKIGGTYKDFFKSYIEVDGKYVEEGWVDKTCKVCKKDTKGEARQVDKLGRYVHVACLEKSNSSSGNFFSKFFSR

Homology

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BLAST of Sed0026302 vs. NCBI nr
Match: XP_004146444.1 (uncharacterized protein LOC101211273 [Cucumis sativus] >KGN50725.1 hypothetical protein Csa_005781 [Cucumis sativus])

HSP 1 Score: 289.7 bits (740), Expect = 1.7e-74
Identity = 149/176 (84.66%), Postives = 157/176 (89.20%), Query Frame = 0


Query: 1   MVAICPPHGGFPSQLGQGLKAARVRQTGRGFNLRVAAEKGEGREEGGGGGGREEKKSLFS 60
           MVAICP HGGFPSQLGQG K+ R R   R  NLRV AEKGE RE GGG    E KKSLFS
Sbjct: 1   MVAICPSHGGFPSQLGQGWKSVRGRPDRRSSNLRVRAEKGEERESGGG----ENKKSLFS 60

Query: 61  SVTEALDFSQVRSSRDAELLDDARQATKSGGRMTREQYGALKRKIGGTYKDFFKSYIEVD 120
           SVTEALDFS VRS+RDAELLDDARQATK+GGRM+REQYGAL+RKIGGTYKDFFKSYIEVD
Sbjct: 61  SVTEALDFSAVRSTRDAELLDDARQATKAGGRMSREQYGALRRKIGGTYKDFFKSYIEVD 120

Query: 121 GKYVEEGWVDKTCKVCKKDTKGEARQVDKLGRYVHVACLEKSNSSSGNFFSKFFSR 177
           G+YVEEGWVDKTCKVCKKDT+GEARQVDKLGRYVHVACLEKSNSS GNFFSKFFS+
Sbjct: 121 GQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRYVHVACLEKSNSSPGNFFSKFFSK 172

[Close]

BLAST of Sed0026302 vs. NCBI nr
Match: XP_008456929.1 (PREDICTED: uncharacterized protein LOC103496731 [Cucumis melo] >XP_016902036.1 PREDICTED: uncharacterized protein LOC103496731 [Cucumis melo] >KAA0067508.1 uncharacterized protein E6C27_scaffold50G00230 [Cucumis melo var. makuwa] >TYK22436.1 uncharacterized protein E5676_scaffold530G00350 [Cucumis melo var. makuwa])

HSP 1 Score: 284.6 bits (727), Expect = 5.6e-73
Identity = 149/176 (84.66%), Postives = 155/176 (88.07%), Query Frame = 0


Query: 1   MVAICPPHGGFPSQLGQGLKAARVRQTGRGFNLRVAAEKGEGREEGGGGGGREEKKSLFS 60
           MVAI P HGGFPSQLGQG K+ R R   R  NLRV AEKGE RE  GG    E KKSLFS
Sbjct: 1   MVAISPSHGGFPSQLGQGWKSVRGRPDRRSSNLRVMAEKGEERESVGG----ENKKSLFS 60

Query: 61  SVTEALDFSQVRSSRDAELLDDARQATKSGGRMTREQYGALKRKIGGTYKDFFKSYIEVD 120
           SVTEALDFS VRSSRDAELLDDARQATK+GGRMTREQYGAL+RKIGGTYKDFFKSYIEVD
Sbjct: 61  SVTEALDFSAVRSSRDAELLDDARQATKAGGRMTREQYGALRRKIGGTYKDFFKSYIEVD 120

Query: 121 GKYVEEGWVDKTCKVCKKDTKGEARQVDKLGRYVHVACLEKSNSSSGNFFSKFFSR 177
           G+YVEEGWVDKTCKVCKKDT+GEARQVDKLGRYVHVACLEKSNSSSGNFFSK FS+
Sbjct: 121 GQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRYVHVACLEKSNSSSGNFFSKLFSK 172

[Close]

BLAST of Sed0026302 vs. NCBI nr
Match: XP_038891315.1 (uncharacterized protein LOC120080762 [Benincasa hispida])

HSP 1 Score: 279.3 bits (713), Expect = 2.4e-71
Identity = 151/179 (84.36%), Postives = 156/179 (87.15%), Query Frame = 0


Query: 1   MVAICPPHGGFPSQLGQGLKAARVRQTGRGFNLRV---AAEKGEGREEGGGGGGREEKKS 60
           MVAI P HGGFPSQL QG K  R R   R  NLRV   AAEKGE RE GGGGG  E KKS
Sbjct: 1   MVAISPSHGGFPSQLRQGWKTVRGR-PDRSSNLRVLAKAAEKGEERESGGGGG--ENKKS 60

Query: 61  LFSSVTEALDFSQVRSSRDAELLDDARQATKSGGRMTREQYGALKRKIGGTYKDFFKSYI 120
           LFSSVTEALDFS VRSSRDAELLDDARQATK+GGRMTREQYGAL+RKIGGTYKDFFKSYI
Sbjct: 61  LFSSVTEALDFSAVRSSRDAELLDDARQATKAGGRMTREQYGALRRKIGGTYKDFFKSYI 120

Query: 121 EVDGKYVEEGWVDKTCKVCKKDTKGEARQVDKLGRYVHVACLEKSNSSSGNFFSKFFSR 177
           EVDG+YVEEGWVDKTCKVCKKDT+GEARQVDKLGRYVHVACLEKS SSSGNFFSK FS+
Sbjct: 121 EVDGQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRYVHVACLEKSKSSSGNFFSKLFSK 176

[Close]

BLAST of Sed0026302 vs. NCBI nr
Match: XP_022941869.1 (uncharacterized protein LOC111447101 [Cucurbita moschata] >KAG6599950.1 hypothetical protein SDJN03_05183, partial [Cucurbita argyrosperma subsp. sororia] >KAG7030630.1 hypothetical protein SDJN02_04667, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 265.4 bits (677), Expect = 3.5e-67
Identity = 139/174 (79.89%), Postives = 149/174 (85.63%), Query Frame = 0


Query: 1   MVAICPPHGGFPSQLGQGLKAARVRQTGRGFNLRVAAEKGEGREEGGGGGGREEKKSLFS 60
           MVAI P H GF SQ GQG K AR     R  NLRV+A+  E  EE   GG R+ K+SLFS
Sbjct: 1   MVAISPSHVGFTSQFGQGWKTAREMTPVRSSNLRVSAKSTEKGEEKEDGGERKNKQSLFS 60

Query: 61  SVTEALDFSQVRSSRDAELLDDARQATKSGGRMTREQYGALKRKIGGTYKDFFKSYIEVD 120
           SVTEALDFSQVRSSRDAELLDDARQATK+GGRM+REQYGAL+RKIGGTYKDFFKSYIEVD
Sbjct: 61  SVTEALDFSQVRSSRDAELLDDARQATKAGGRMSREQYGALRRKIGGTYKDFFKSYIEVD 120

Query: 121 GKYVEEGWVDKTCKVCKKDTKGEARQVDKLGRYVHVACLEKSNSSSGNFFSKFF 175
           G+YVEEGWVDKTCKVCKKDT+GEARQVDKLGRY HVACLEKSNSSS NFF+KFF
Sbjct: 121 GQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRYAHVACLEKSNSSSPNFFTKFF 174

[Close]

BLAST of Sed0026302 vs. NCBI nr
Match: XP_023532465.1 (uncharacterized protein LOC111794620 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 262.7 bits (670), Expect = 2.3e-66
Identity = 138/174 (79.31%), Postives = 148/174 (85.06%), Query Frame = 0


Query: 1   MVAICPPHGGFPSQLGQGLKAARVRQTGRGFNLRVAAEKGEGREEGGGGGGREEKKSLFS 60
           MVAI P H GF SQ GQG K AR     R  NLRV+A+  E  EE    G R+ K+SLFS
Sbjct: 1   MVAISPSHVGFTSQFGQGWKTAREMTPVRSSNLRVSAKATEKGEEKEDAGERKNKQSLFS 60

Query: 61  SVTEALDFSQVRSSRDAELLDDARQATKSGGRMTREQYGALKRKIGGTYKDFFKSYIEVD 120
           SVTEALDFSQVRSSRDAELLDDARQATK+GGRM+REQYGAL+RKIGGTYKDFFKSYIEVD
Sbjct: 61  SVTEALDFSQVRSSRDAELLDDARQATKAGGRMSREQYGALRRKIGGTYKDFFKSYIEVD 120

Query: 121 GKYVEEGWVDKTCKVCKKDTKGEARQVDKLGRYVHVACLEKSNSSSGNFFSKFF 175
           G+YVEEGWVDKTCKVCKKDT+GEARQVDKLGRY HVACLEKSNSSS NFF+KFF
Sbjct: 121 GQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRYAHVACLEKSNSSSPNFFTKFF 174

[Close]

BLAST of Sed0026302 vs. ExPASy TrEMBL
Match: A0A0A0KM41 (GATA-N domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G220390 PE=4 SV=1)

HSP 1 Score: 289.7 bits (740), Expect = 8.5e-75
Identity = 149/176 (84.66%), Postives = 157/176 (89.20%), Query Frame = 0


Query: 1   MVAICPPHGGFPSQLGQGLKAARVRQTGRGFNLRVAAEKGEGREEGGGGGGREEKKSLFS 60
           MVAICP HGGFPSQLGQG K+ R R   R  NLRV AEKGE RE GGG    E KKSLFS
Sbjct: 1   MVAICPSHGGFPSQLGQGWKSVRGRPDRRSSNLRVRAEKGEERESGGG----ENKKSLFS 60

Query: 61  SVTEALDFSQVRSSRDAELLDDARQATKSGGRMTREQYGALKRKIGGTYKDFFKSYIEVD 120
           SVTEALDFS VRS+RDAELLDDARQATK+GGRM+REQYGAL+RKIGGTYKDFFKSYIEVD
Sbjct: 61  SVTEALDFSAVRSTRDAELLDDARQATKAGGRMSREQYGALRRKIGGTYKDFFKSYIEVD 120

Query: 121 GKYVEEGWVDKTCKVCKKDTKGEARQVDKLGRYVHVACLEKSNSSSGNFFSKFFSR 177
           G+YVEEGWVDKTCKVCKKDT+GEARQVDKLGRYVHVACLEKSNSS GNFFSKFFS+
Sbjct: 121 GQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRYVHVACLEKSNSSPGNFFSKFFSK 172

[Close]

BLAST of Sed0026302 vs. ExPASy TrEMBL
Match: A0A1S3C3X8 (uncharacterized protein LOC103496731 OS=Cucumis melo OX=3656 GN=LOC103496731 PE=4 SV=1)

HSP 1 Score: 284.6 bits (727), Expect = 2.7e-73
Identity = 149/176 (84.66%), Postives = 155/176 (88.07%), Query Frame = 0


Query: 1   MVAICPPHGGFPSQLGQGLKAARVRQTGRGFNLRVAAEKGEGREEGGGGGGREEKKSLFS 60
           MVAI P HGGFPSQLGQG K+ R R   R  NLRV AEKGE RE  GG    E KKSLFS
Sbjct: 1   MVAISPSHGGFPSQLGQGWKSVRGRPDRRSSNLRVMAEKGEERESVGG----ENKKSLFS 60

Query: 61  SVTEALDFSQVRSSRDAELLDDARQATKSGGRMTREQYGALKRKIGGTYKDFFKSYIEVD 120
           SVTEALDFS VRSSRDAELLDDARQATK+GGRMTREQYGAL+RKIGGTYKDFFKSYIEVD
Sbjct: 61  SVTEALDFSAVRSSRDAELLDDARQATKAGGRMTREQYGALRRKIGGTYKDFFKSYIEVD 120

Query: 121 GKYVEEGWVDKTCKVCKKDTKGEARQVDKLGRYVHVACLEKSNSSSGNFFSKFFSR 177
           G+YVEEGWVDKTCKVCKKDT+GEARQVDKLGRYVHVACLEKSNSSSGNFFSK FS+
Sbjct: 121 GQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRYVHVACLEKSNSSSGNFFSKLFSK 172

[Close]

BLAST of Sed0026302 vs. ExPASy TrEMBL
Match: A0A5D3DFR3 (GATA-N domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold530G00350 PE=4 SV=1)

HSP 1 Score: 284.6 bits (727), Expect = 2.7e-73
Identity = 149/176 (84.66%), Postives = 155/176 (88.07%), Query Frame = 0


Query: 1   MVAICPPHGGFPSQLGQGLKAARVRQTGRGFNLRVAAEKGEGREEGGGGGGREEKKSLFS 60
           MVAI P HGGFPSQLGQG K+ R R   R  NLRV AEKGE RE  GG    E KKSLFS
Sbjct: 1   MVAISPSHGGFPSQLGQGWKSVRGRPDRRSSNLRVMAEKGEERESVGG----ENKKSLFS 60

Query: 61  SVTEALDFSQVRSSRDAELLDDARQATKSGGRMTREQYGALKRKIGGTYKDFFKSYIEVD 120
           SVTEALDFS VRSSRDAELLDDARQATK+GGRMTREQYGAL+RKIGGTYKDFFKSYIEVD
Sbjct: 61  SVTEALDFSAVRSSRDAELLDDARQATKAGGRMTREQYGALRRKIGGTYKDFFKSYIEVD 120

Query: 121 GKYVEEGWVDKTCKVCKKDTKGEARQVDKLGRYVHVACLEKSNSSSGNFFSKFFSR 177
           G+YVEEGWVDKTCKVCKKDT+GEARQVDKLGRYVHVACLEKSNSSSGNFFSK FS+
Sbjct: 121 GQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRYVHVACLEKSNSSSGNFFSKLFSK 172

[Close]

BLAST of Sed0026302 vs. ExPASy TrEMBL
Match: A0A6J1FPP4 (uncharacterized protein LOC111447101 OS=Cucurbita moschata OX=3662 GN=LOC111447101 PE=4 SV=1)

HSP 1 Score: 265.4 bits (677), Expect = 1.7e-67
Identity = 139/174 (79.89%), Postives = 149/174 (85.63%), Query Frame = 0


Query: 1   MVAICPPHGGFPSQLGQGLKAARVRQTGRGFNLRVAAEKGEGREEGGGGGGREEKKSLFS 60
           MVAI P H GF SQ GQG K AR     R  NLRV+A+  E  EE   GG R+ K+SLFS
Sbjct: 1   MVAISPSHVGFTSQFGQGWKTAREMTPVRSSNLRVSAKSTEKGEEKEDGGERKNKQSLFS 60

Query: 61  SVTEALDFSQVRSSRDAELLDDARQATKSGGRMTREQYGALKRKIGGTYKDFFKSYIEVD 120
           SVTEALDFSQVRSSRDAELLDDARQATK+GGRM+REQYGAL+RKIGGTYKDFFKSYIEVD
Sbjct: 61  SVTEALDFSQVRSSRDAELLDDARQATKAGGRMSREQYGALRRKIGGTYKDFFKSYIEVD 120

Query: 121 GKYVEEGWVDKTCKVCKKDTKGEARQVDKLGRYVHVACLEKSNSSSGNFFSKFF 175
           G+YVEEGWVDKTCKVCKKDT+GEARQVDKLGRY HVACLEKSNSSS NFF+KFF
Sbjct: 121 GQYVEEGWVDKTCKVCKKDTRGEARQVDKLGRYAHVACLEKSNSSSPNFFTKFF 174

[Close]

BLAST of Sed0026302 vs. ExPASy TrEMBL
Match: A0A6J1D0J3 (uncharacterized protein LOC111015936 OS=Momordica charantia OX=3673 GN=LOC111015936 PE=4 SV=1)

HSP 1 Score: 262.3 bits (669), Expect = 1.4e-66
Identity = 139/175 (79.43%), Postives = 150/175 (85.71%), Query Frame = 0


Query: 2   VAICPPHGGFPSQLGQGLKAARVRQTGRGFNLRVAAEKGEGREEGGGGGGREEKKSLFSS 61
           VAI P HGGFP    QG  A+R+   GR  N RV+A+     EE   GGG+E KKSLFSS
Sbjct: 6   VAISPSHGGFPP---QGWNASRL---GRRSNYRVSAKAAASGEEREDGGGKERKKSLFSS 65

Query: 62  VTEALDFSQVRSSRDAELLDDARQATKSGGRMTREQYGALKRKIGGTYKDFFKSYIEVDG 121
           VTEALDFSQVRSSRDAELL+DARQAT+SGGRMTREQYGAL+RKIGGTYKDFFKSYIEVDG
Sbjct: 66  VTEALDFSQVRSSRDAELLEDARQATRSGGRMTREQYGALRRKIGGTYKDFFKSYIEVDG 125

Query: 122 KYVEEGWVDKTCKVCKKDTKGEARQVDKLGRYVHVACLEKSNSSSGNFFSKFFSR 177
           +YVEEGWVDKTCKVCKKDT+GEARQVDKLG YVHVACLE SNSSSGNFFSKFFS+
Sbjct: 126 QYVEEGWVDKTCKVCKKDTRGEARQVDKLGTYVHVACLENSNSSSGNFFSKFFSK 174

[Close]

BLAST of Sed0026302 vs. TAIR 10
Match: AT3G56290.1 (unknown protein; Has 39 Blast hits to 39 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 197.6 bits (501), Expect = 8.4e-51
Identity = 101/154 (65.58%), Postives = 124/154 (80.52%), Query Frame = 0


Query: 23  RVRQTGRGFNLRVAAEKGEGREEGGGGGGREEKKSLFSSVTEALDFSQVRSSRDAELLDD 82
           R+ +  R   +    EK E +++       EE+ SLF+ +T+ALDFSQVRS +DAELL +
Sbjct: 28  RIFRNPRWVVVSAKQEKDEDKKK------NEEETSLFTQLTDALDFSQVRSEKDAELLYE 87

Query: 83  ARQATKSGGRMTREQYGALKRKIGGTYKDFFKSYIEVDGKYVEEGWVDKTCKVCKKDTKG 142
           AR+ATKSG +MT+EQYGAL+RKIGGTYKDFFKSY+EVDG+YVEEGWVDKTCK+CKKDTKG
Sbjct: 88  AREATKSGRKMTQEQYGALRRKIGGTYKDFFKSYVEVDGQYVEEGWVDKTCKICKKDTKG 147

Query: 143 EARQVDKLGRYVHVACLEKSNSSSGNFFSKFFSR 177
           EARQVDKLGRY HV+CL+  N  SGNFF++ FSR
Sbjct: 148 EARQVDKLGRYAHVSCLQ--NPPSGNFFTRLFSR 173

The following BLAST results are available for this feature:

BLAST of Sed0026302 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004146444.1	1.7e-74	84.66	uncharacterized protein LOC101211273 [Cucumis sativus] >KGN50725.1 hypothetical ...	[more]
XP_008456929.1	5.6e-73	84.66	PREDICTED: uncharacterized protein LOC103496731 [Cucumis melo] >XP_016902036.1 P...	[more]
XP_038891315.1	2.4e-71	84.36	uncharacterized protein LOC120080762 [Benincasa hispida]	[more]
XP_022941869.1	3.5e-67	79.89	uncharacterized protein LOC111447101 [Cucurbita moschata] >KAG6599950.1 hypothet...	[more]
XP_023532465.1	2.3e-66	79.31	uncharacterized protein LOC111794620 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Sed0026302 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0026302 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KM41	8.5e-75	84.66	GATA-N domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G220390 PE=4...	[more]
A0A1S3C3X8	2.7e-73	84.66	uncharacterized protein LOC103496731 OS=Cucumis melo OX=3656 GN=LOC103496731 PE=...	[more]
A0A5D3DFR3	2.7e-73	84.66	GATA-N domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]
A0A6J1FPP4	1.7e-67	79.89	uncharacterized protein LOC111447101 OS=Cucurbita moschata OX=3662 GN=LOC1114471...	[more]
A0A6J1D0J3	1.4e-66	79.43	uncharacterized protein LOC111015936 OS=Momordica charantia OX=3673 GN=LOC111015...	[more]

BLAST of Sed0026302 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G56290.1	8.4e-51	65.58	unknown protein; Has 39 Blast hits to 39 proteins in 15 species: Archae - 0; Bac...	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 32..56
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 36..56
None	No IPR available	PANTHER	PTHR36771	POTASSIUM TRANSPORTER	coord: 3..176
None	No IPR available	PANTHER	PTHR36771:SF2	POTASSIUM TRANSPORTER	coord: 3..176

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0026302.1	Sed0026302.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009658	chloroplast organization
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0008270	zinc ion binding