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Sed0026243 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GGCCACTCCAATTCCCAGGTACCCAAATTCCCAAATCTCCTGTTTTTTTCTTTTTCTTTTTATCATTTTCAGCTTTGGTCAAACTTTTCAGTCCCCACTCTATCCATGGACCCAATCAGTGCCTCTCTTCAATCTTCTCCTTCAAGCAATGAGCCTCGGATTCATGAAGCTTTGGATCTTTTAGAGTTTTGTTGGTTCTTTGATAATCTGCTTCTTAGGAGAAACCCCACAATGAAAGTTTCTCATTCTGATCCTTGTCTTTCTAATGTTGCCCACCAAGTGTTTGTTGAAAGTCCTGTGTGTAATGTCTCCCCATCTGCTTTGGATGGGGGTGTTTTGCTTGAGAATGGTGCTGGTAAGCGTCGGAATCTGCTCCGAACGCCTTCGTTGCCGTCTCGCATGGACCGAGGGGAGGAAGTTCGAGAGAAGGGGAGTGGTTCTACGCCATTGTTAGAGGATGGTGTGGTGGTTGAAGTTTGTGATGGTAATGTTGGCTCACCTGCTTTGGATATGGATGTTTCCATTGGAAATGGTGGTGGTGAATGCAGGAAGCTTCTTCGAACACCCTCATTGCCGTCGCGAGCGAATCGGGAGGAAGGATTCCGAGAGAATGGGAATGGTTCTAGGACATTATTAGACAATAGTGTTGTTTTGGAAAATCATGGTGATGATGCCTGCTCTTCTGCTTTGGATATGGCTGTTTCGCTGGGAAATGGTGGCAGCCAACGTAGGAGTTTGCTCCGAATGCCATCGTTACCAGCCCGTGTGGTGCGGGACGAAGGGATTCGAGAGAAGGGGAATGGTTCCAGGGCATTATTAGAGCATGGTTTGCTTAAAATATCAGCAAGGCCACCTTGTGTAGAGAGGAAAGAAGAAGGAACTCGCAGCAAAGAAAGCGGCAGCACTCGGAGGAGCAAGTCGGCAAGGAAACTGAGGCATGGTAATCTGGTAAGAACACCATCTTTGCCACCATGTATAGGAAGGGAAAAAGAATTTGGAGACAAGGAAGTTGCTGCTAGAATCAGAAACTCTATTCAACCCAACCTTTCTGAATTCTTTCCCACAAGACAAGAGGTATTACAAAAATTTTGTTCTTTTTCAACTGTCACATCATTCTTGATGTGCACTTGAATGATATTAGAAATTTCTTATGGTTCAGAGCAAATATAGCTACTTTTTTTAGAAGAATATAGCTACTTTTTATCTTAATAGATTCATTGTTAAGAATATATTGAAAAGATAACCGCAGTGGTCTAGTAGTCAAGTGGGCCTAGGGGAACAAAGAGGTGAGGACTTCAAACCATGGTGGTCACCTATCTAAGAATTAATTTACTATGAATTTCCTTGACATTCAAATGTGTTAGTGTCGGCGGTATGTCCTATGACAATAGTCGAATTGCACAAAAGCTGATCTAGACAGTTATAGATATCAAAAAAAATATATTGAAAAGATAAAATTAACTCGATGATGGTTTGAGTTAGTTTATCATGAGTTAGACAAAGAAGTCATAAATTCATACGTTTGTGTTGTAATTTATATTTAATCCTTTTTTTACAGTAATTTAATCCATTTGCTGACCTATATGCTAATGTTTGAACCTTGATGAGATTGTAAAAAGATTACATTATTTGACTTTGGGACTCCGGGATAATGCTTGAGAATCATAGTGACTTTTTTTTAGATGTAAACTTTTCATTCATGTATGAAAAAAAATACTAAAATCCTATCGAAACTAGATACAAAAAAAAAAAAAAAAAAAAATCTGTAAATCAATGTGGGAAGACTGTAGTTAGGAAAAAGGTGAGCATAAATTGAAAAGATGATCTTGAGTGTCCTGATCCCTGCAACACAATGAGCCACAATTAGGTGATCCCTTCTTTTGGTAGATGTCTTGGGTGTTCACTGCTTTGTGGCTAAGCTCCTTGTAAAGATATCGATTCCGAATCCGTACTCAGATTCAAGTAAAACAAATCCAACACAGATATTACTCATATAACTAATAATCCAAATGAAACAAAGCTAATTTCATAAGAACTACCAGCAGCATGATCTTCATTATAGGACTGAAACATGGATTACAAGGAAATAGCAAATAAACAAACGATAACTAAGGAACGATGTTACTAGGCAATTCGAGAGCACCGAAACCTCCCCTGAAGACTACACTTCCCAAAATTCAGACCCCCCTTCTCTCCCTTCTCTATACACTATTTATTACTAGTAATTCATTTACTCCCATACAAAATAACCACTACCCTACGATTTCCCCTAAAGGCACCTTCTACAAATTTAAGGAGAATTGGTATCCTTACACTCCTATATCAAAAACTTAGTCCCCATTGATAACGAGTTGGTTTTTTTTTTAATTTTTTCTGCATATTGTTTCATTTTCTCACAGATAAATCCTAACCAAATTCCATAAATCAAAAAAAGTTTGTTTTAGCTTTCAAATTTTGGTTTGGTTTTTGAGAAAAACATAAGTAAAGTAGTAGTTTTAGGCTTAAATTAAAAAAAAAAAAAAAAAAAAAGGTTTTGTGCCTTTTAACTTTTTTGGGCTGTGGCCCCTTCCAAAGAGTCTTATAAATCTCTGTAATGCTAAACGAACTGGGGTTAGGCCTGATAGTATTTTATAGCTTGCTGCTAGTCTTATAAATCTCTGTAATGCTAAATCTCTGTAAATCAAATGGTTATGTGCCTTTTAACATTTTCTCACAGATAAATCCTAACCAAATACCATAAACCAGAAGTGGGTACTGAGTATTATATAGCTTGCTTCTCTCCTGGACTGATGGCGGCCAAAGTTTTCTCGTAAAATATTAGGGTTGACTTTGAGAATAATGCGAGGATATCAAAAGAATCGACTTTAACTCAAATAGCTTAAATTTTTTGGTTCAAAAGTGGTTAACTAACTCTTTAGCAACTTAGTAAAACTCCAGTAGTTTCTTTCTTGTGTGTAGCAACTACAGAATGTTGAATCTCTGAAATGAGTTCAACACAATACATTCTCTTCAAAAATAGAATAACTAGAACAAATTTCATTTGCTCTATTCTTTTTTTAGTTATATTTGGTGCTTATTCACAGGTTCTCGAAAAGAAGTTCAGCCTCCCGATGTGTCGAATCCCGACAAGCAACGACGAAATGTGGCATCAATTTCTCATCCAAATGAGGAGGAGGAGAAGCCAAAGTGAGCTTGAATCAGAAGAACTGCAAGGTTTCAAGGACTTAGGATTCACATTTGACAAAAAAGATGTAAACCCAACAGTGGTTGACATAATTCCAGGCCTGAGAGAGAAAAAAGAGGAAGAGGTGGAGGATGTAAGGGCTAGAAGGCCTTATCTTTCTGAGGCTTGGATGCTCCAAACTCATCTTCTTCCTCCAATTCCAAAATGGGACAGTAGAAAATCTGCTGAAGATATGAAACAACAAATCAAGTTTTGGGCTAGATCTGTGGCTTCTAATGTGCACTAAAATGGTGAGAGCTTTTAAACATATCATGTTTATGGTAAATATGCATACATTCCTTCATTTTCTAAAGTCAAATGTAGCATGCTTTGAAATACCATTTTTTTCATGAAACTTTGTATTCATTCTATTTTATTCTATATAGTTTCAATCAATTTTAAATTTAGTTTCATCGTTAGTTAGAAGTTAACTGTGATCTATCTTGGCAAAATAATAGTAACAATAGTTTCCATTTGAAAAAAAGACAATGTGTGTATATGTTCCCAAATTTATAGTGGAAAGACATAAGTTCTTTGGAAAAGTTAACCAAAATCTAATGGTAGTGATTCATTTTGCTAAAGTAGAGTAGAGGGACTAACTTTGGATAAGAGTTCAATCCATTCCATGGTGATCGCCTATCAAGGAATTAATCTGCTATGGATTTTTTTGACATCTAAATGTTGTAGGGTCAAGCAATATGCCTTGTAACAATAGTCGAGGTGCGTGCAAACTAGTTCGAACAGTCACGGATAACAAAAGAAATAGTAGTCCAAGATAAAACATATTTCAACTTACTCGGACTGATAGTATTTTAACCAAAAGCTCAATGATAGATTATTAATTATAATCTATTTCACTTTTTGTTTTATTTTGTCTCAATTATGCTAAATTGCAGGTCCAAATGAACATCATTTGAGGAGAAAGTAGAGTAAAAAGTGAAGGTCAGACATTTGAATGAGTTTTGTCACATTTCCACCACCAAATGAAGAGAAAAATGGCCAAAATCAAATGTAATGTTTGTAAATTACAAACATGCTGGGCCTATTGAAGCTACAAAAAGTTTCCTTCAAAGATGAGCCTTCTCATCTGCTATTCATCAAAAAGGGTAAAGTGAAAATTGGAACGTG GGCCACTCCAATTCCCAGGTACCCAAATTCCCAAATCTCCTGTTTTTTTCTTTTTCTTTTTATCATTTTCAGCTTTGGTCAAACTTTTCAGTCCCCACTCTATCCATGGACCCAATCAGTGCCTCTCTTCAATCTTCTCCTTCAAGCAATGAGCCTCGGATTCATGAAGCTTTGGATCTTTTAGAGTTTTGTTGGTTCTTTGATAATCTGCTTCTTAGGAGAAACCCCACAATGAAAGTTTCTCATTCTGATCCTTGTCTTTCTAATGTTGCCCACCAAGTGTTTGTTGAAAGTCCTGTGTGTAATGTCTCCCCATCTGCTTTGGATGGGGGTGTTTTGCTTGAGAATGGTGCTGGTAAGCGTCGGAATCTGCTCCGAACGCCTTCGTTGCCGTCTCGCATGGACCGAGGGGAGGAAGTTCGAGAGAAGGGGAGTGGTTCTACGCCATTGTTAGAGGATGGTGTGGTGGTTGAAGTTTGTGATGGTAATGTTGGCTCACCTGCTTTGGATATGGATGTTTCCATTGGAAATGGTGGTGGTGAATGCAGGAAGCTTCTTCGAACACCCTCATTGCCGTCGCGAGCGAATCGGGAGGAAGGATTCCGAGAGAATGGGAATGGTTCTAGGACATTATTAGACAATAGTGTTGTTTTGGAAAATCATGGTGATGATGCCTGCTCTTCTGCTTTGGATATGGCTGTTTCGCTGGGAAATGGTGGCAGCCAACGTAGGAGTTTGCTCCGAATGCCATCGTTACCAGCCCGTGTGGTGCGGGACGAAGGGATTCGAGAGAAGGGGAATGGTTCCAGGGCATTATTAGAGCATGGTTTGCTTAAAATATCAGCAAGGCCACCTTGTGTAGAGAGGAAAGAAGAAGGAACTCGCAGCAAAGAAAGCGGCAGCACTCGGAGGAGCAAGTCGGCAAGGAAACTGAGGCATGGTAATCTGGTAAGAACACCATCTTTGCCACCATGTATAGGAAGGGAAAAAGAATTTGGAGACAAGGAAGTTGCTGCTAGAATCAGAAACTCTATTCAACCCAACCTTTCTGAATTCTTTCCCACAAGACAAGAGGTTCTCGAAAAGAAGTTCAGCCTCCCGATGTGTCGAATCCCGACAAGCAACGACGAAATGTGGCATCAATTTCTCATCCAAATGAGGAGGAGGAGAAGCCAAAGTGAGCTTGAATCAGAAGAACTGCAAGGTTTCAAGGACTTAGGATTCACATTTGACAAAAAAGATGTAAACCCAACAGTGGTTGACATAATTCCAGGCCTGAGAGAGAAAAAAGAGGAAGAGGTGGAGGATGTAAGGGCTAGAAGGCCTTATCTTTCTGAGGCTTGGATGCTCCAAACTCATCTTCTTCCTCCAATTCCAAAATGGGACAGTAGAAAATCTGCTGAAGATATGAAACAACAAATCAAGTTTTGGGCTAGATCTGTGGCTTCTAATGTGCACTAAAATGGTCCAAATGAACATCATTTGAGGAGAAAGTAGAGTAAAAAGTGAAGGTCAGACATTTGAATGAGTTTTGTCACATTTCCACCACCAAATGAAGAGAAAAATGGCCAAAATCAAATGTAATGTTTGTAAATTACAAACATGCTGGGCCTATTGAAGCTACAAAAAGTTTCCTTCAAAGATGAGCCTTCTCATCTGCTATTCATCAAAAAGGGTAAAGTGAAAATTGGAACGTG ATGGACCCAATCAGTGCCTCTCTTCAATCTTCTCCTTCAAGCAATGAGCCTCGGATTCATGAAGCTTTGGATCTTTTAGAGTTTTGTTGGTTCTTTGATAATCTGCTTCTTAGGAGAAACCCCACAATGAAAGTTTCTCATTCTGATCCTTGTCTTTCTAATGTTGCCCACCAAGTGTTTGTTGAAAGTCCTGTGTGTAATGTCTCCCCATCTGCTTTGGATGGGGGTGTTTTGCTTGAGAATGGTGCTGGTAAGCGTCGGAATCTGCTCCGAACGCCTTCGTTGCCGTCTCGCATGGACCGAGGGGAGGAAGTTCGAGAGAAGGGGAGTGGTTCTACGCCATTGTTAGAGGATGGTGTGGTGGTTGAAGTTTGTGATGGTAATGTTGGCTCACCTGCTTTGGATATGGATGTTTCCATTGGAAATGGTGGTGGTGAATGCAGGAAGCTTCTTCGAACACCCTCATTGCCGTCGCGAGCGAATCGGGAGGAAGGATTCCGAGAGAATGGGAATGGTTCTAGGACATTATTAGACAATAGTGTTGTTTTGGAAAATCATGGTGATGATGCCTGCTCTTCTGCTTTGGATATGGCTGTTTCGCTGGGAAATGGTGGCAGCCAACGTAGGAGTTTGCTCCGAATGCCATCGTTACCAGCCCGTGTGGTGCGGGACGAAGGGATTCGAGAGAAGGGGAATGGTTCCAGGGCATTATTAGAGCATGGTTTGCTTAAAATATCAGCAAGGCCACCTTGTGTAGAGAGGAAAGAAGAAGGAACTCGCAGCAAAGAAAGCGGCAGCACTCGGAGGAGCAAGTCGGCAAGGAAACTGAGGCATGGTAATCTGGTAAGAACACCATCTTTGCCACCATGTATAGGAAGGGAAAAAGAATTTGGAGACAAGGAAGTTGCTGCTAGAATCAGAAACTCTATTCAACCCAACCTTTCTGAATTCTTTCCCACAAGACAAGAGGTTCTCGAAAAGAAGTTCAGCCTCCCGATGTGTCGAATCCCGACAAGCAACGACGAAATGTGGCATCAATTTCTCATCCAAATGAGGAGGAGGAGAAGCCAAAGTGAGCTTGAATCAGAAGAACTGCAAGGTTTCAAGGACTTAGGATTCACATTTGACAAAAAAGATGTAAACCCAACAGTGGTTGACATAATTCCAGGCCTGAGAGAGAAAAAAGAGGAAGAGGTGGAGGATGTAAGGGCTAGAAGGCCTTATCTTTCTGAGGCTTGGATGCTCCAAACTCATCTTCTTCCTCCAATTCCAAAATGGGACAGTAGAAAATCTGCTGAAGATATGAAACAACAAATCAAGTTTTGGGCTAGATCTGTGGCTTCTAATGTGCACTAA MDPISASLQSSPSSNEPRIHEALDLLEFCWFFDNLLLRRNPTMKVSHSDPCLSNVAHQVFVESPVCNVSPSALDGGVLLENGAGKRRNLLRTPSLPSRMDRGEEVREKGSGSTPLLEDGVVVEVCDGNVGSPALDMDVSIGNGGGECRKLLRTPSLPSRANREEGFRENGNGSRTLLDNSVVLENHGDDACSSALDMAVSLGNGGSQRRSLLRMPSLPARVVRDEGIREKGNGSRALLEHGLLKISARPPCVERKEEGTRSKESGSTRRSKSARKLRHGNLVRTPSLPPCIGREKEFGDKEVAARIRNSIQPNLSEFFPTRQEVLEKKFSLPMCRIPTSNDEMWHQFLIQMRRRRSQSELESEELQGFKDLGFTFDKKDVNPTVVDIIPGLREKKEEEVEDVRARRPYLSEAWMLQTHLLPPIPKWDSRKSAEDMKQQIKFWARSVASNVH Homology
BLAST of Sed0026243 vs. NCBI nr
Match: XP_038874899.1 (uncharacterized protein LOC120067383 isoform X1 [Benincasa hispida] >XP_038874933.1 uncharacterized protein LOC120067383 isoform X1 [Benincasa hispida] >XP_038874965.1 uncharacterized protein LOC120067383 isoform X1 [Benincasa hispida]) HSP 1 Score: 684.1 bits (1764), Expect = 8.1e-193 Identity = 348/452 (76.99%), Postives = 385/452 (85.18%), Query Frame = 0
BLAST of Sed0026243 vs. NCBI nr
Match: XP_023551849.1 (uncharacterized protein LOC111809699 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023551850.1 uncharacterized protein LOC111809699 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 658.3 bits (1697), Expect = 4.8e-185 Identity = 350/509 (68.76%), Postives = 389/509 (76.42%), Query Frame = 0
BLAST of Sed0026243 vs. NCBI nr
Match: XP_022922903.1 (uncharacterized protein LOC111430741 [Cucurbita moschata] >XP_022922904.1 uncharacterized protein LOC111430741 [Cucurbita moschata]) HSP 1 Score: 658.3 bits (1697), Expect = 4.8e-185 Identity = 349/513 (68.03%), Postives = 386/513 (75.24%), Query Frame = 0
BLAST of Sed0026243 vs. NCBI nr
Match: KAG7015030.1 (hypothetical protein SDJN02_22661, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 658.3 bits (1697), Expect = 4.8e-185 Identity = 350/513 (68.23%), Postives = 386/513 (75.24%), Query Frame = 0
BLAST of Sed0026243 vs. NCBI nr
Match: KAG6577008.1 (hypothetical protein SDJN03_24582, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 652.1 bits (1681), Expect = 3.4e-183 Identity = 347/512 (67.77%), Postives = 385/512 (75.20%), Query Frame = 0
BLAST of Sed0026243 vs. ExPASy TrEMBL
Match: A0A6J1E4T2 (uncharacterized protein LOC111430741 OS=Cucurbita moschata OX=3662 GN=LOC111430741 PE=4 SV=1) HSP 1 Score: 658.3 bits (1697), Expect = 2.3e-185 Identity = 349/513 (68.03%), Postives = 386/513 (75.24%), Query Frame = 0
BLAST of Sed0026243 vs. ExPASy TrEMBL
Match: A0A5D3CIY0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold227G001080 PE=4 SV=1) HSP 1 Score: 645.2 bits (1663), Expect = 2.0e-181 Identity = 332/454 (73.13%), Postives = 376/454 (82.82%), Query Frame = 0
BLAST of Sed0026243 vs. ExPASy TrEMBL
Match: A0A5A7UXD2 (DUF3082 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold803G00340 PE=4 SV=1) HSP 1 Score: 644.0 bits (1660), Expect = 4.5e-181 Identity = 331/454 (72.91%), Postives = 376/454 (82.82%), Query Frame = 0
BLAST of Sed0026243 vs. ExPASy TrEMBL
Match: A0A6J1J9E4 (uncharacterized protein LOC111482920 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111482920 PE=4 SV=1) HSP 1 Score: 642.5 bits (1656), Expect = 1.3e-180 Identity = 345/515 (66.99%), Postives = 383/515 (74.37%), Query Frame = 0
BLAST of Sed0026243 vs. ExPASy TrEMBL
Match: A0A6J1CP13 (uncharacterized protein LOC111012857 OS=Momordica charantia OX=3673 GN=LOC111012857 PE=4 SV=1) HSP 1 Score: 621.7 bits (1602), Expect = 2.4e-174 Identity = 334/509 (65.62%), Postives = 372/509 (73.08%), Query Frame = 0
BLAST of Sed0026243 vs. TAIR 10
Match: AT2G42760.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1685 (InterPro:IPR012881); Has 170 Blast hits to 164 proteins in 34 species: Archae - 0; Bacteria - 1; Metazoa - 26; Fungi - 10; Plants - 107; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). ) HSP 1 Score: 70.1 bits (170), Expect = 5.2e-12 Identity = 48/127 (37.80%), Postives = 68/127 (53.54%), Query Frame = 0
BLAST of Sed0026243 vs. TAIR 10
Match: AT3G15115.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G53180.1); Has 47 Blast hits to 47 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 13; Fungi - 0; Plants - 30; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). ) HSP 1 Score: 70.1 bits (170), Expect = 5.2e-12 Identity = 69/234 (29.49%), Postives = 111/234 (47.44%), Query Frame = 0
BLAST of Sed0026243 vs. TAIR 10
Match: AT1G53180.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G15115.1); Has 58 Blast hits to 56 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 4; Plants - 29; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink). ) HSP 1 Score: 63.2 bits (152), Expect = 6.3e-10 Identity = 115/453 (25.39%), Postives = 173/453 (38.19%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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