Sed0026241 (gene) Chayote v1

Overview


Name	Sed0026241
Type	gene
Organism	Sechium edule (Chayote v1)
Description	protein NDR1-like
Location	LG07: 42013434 .. 42014479 (-)
RNA-Seq Expression	Sed0026241
Synteny	Sed0026241

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAAAAACAATTCTCTCCACTGAGTTTTATCTTTTGTGGTTGGTCCCACATCGGAACTCTCTTTTTAGTACCAACGCCATTGAATCATCTTCTGTTCTCAACTTCTCATTTCTTCTGAAACCCATTTTTTCCATTTCGCCGGAAAACATGTCGGAATCCGGCGGATGCTGCCGGTGCTGCTTCAGCTTCATCTTAACCTCCGGCTTCGCCGCTCTGTTCTTATGGCTCAGCCTTCGAACCCACAAACCCAAATGCTCGATCGAATATTTCTACATTCCAGCCCTGAATCAAACCCTTAATTCCTCTTCAAATTCCACCGTCTTCTTCGATCTCCGCCTCAAAAACCAGAACAAAGACAAATCCGTGTTCTACGACTCCATCGCCCTCAATTTGTCTCTCGTCGGGGCTCCGGCGGACGGCGGCGGACGGCGCACGGTGGCGAACTTGACGGAGCCCGGATTCCACCAGGGCCGCGACAAGAAGGCGTTAAAGAAGAACGCCGTCGCAGCTGCCGGAGTGGATTGGAAGGCGGTTTCCCGGAATGGGCCGGCGGTTTTCCGGCTGGATTTGGCGACGGCGGTCAGGTACAAGATCTTGTTCTGGAAGACCAAGAAGGAGAGTCTGAGAGTTGGGGTAGAGGTCAAAGTCAACGGGCAGGGGTTGAAGGATTACCCCGGTGGAATTACGCTCAACTCCGGCGCCTCCGTGACTGGCGGTTTCCCGGTTAGGGTTGTTATTTGGAGTTATTGGGTTTTGGTTTTGTGGATTTTTTGTGGAATTTTGGATGGGAAATCGAATTGAAGTGTTTTTGTTTTTTGCGGTGGGTTTGTTTTGTTTTGACGGAATTTTTGGGCGGCGATTTTCGTCGGAAGTGTCTCCACCGCCCACTCCCGGCGGACGGGAGAATGGTAGAGAAATTAATTAGATATTTTGTGTTTTTTTTTTGGAATTTTATAAATTAAAGATTTGGTTGTTGATGAAATTATTTAAGCTTAATTGACCTGTGCTGTGAGTAATTTCATAACCTTTGAGAGTGTGTGTGAG

mRNA sequence

AAAAAAAAACAATTCTCTCCACTGAGTTTTATCTTTTGTGGTTGGTCCCACATCGGAACTCTCTTTTTAGTACCAACGCCATTGAATCATCTTCTGTTCTCAACTTCTCATTTCTTCTGAAACCCATTTTTTCCATTTCGCCGGAAAACATGTCGGAATCCGGCGGATGCTGCCGGTGCTGCTTCAGCTTCATCTTAACCTCCGGCTTCGCCGCTCTGTTCTTATGGCTCAGCCTTCGAACCCACAAACCCAAATGCTCGATCGAATATTTCTACATTCCAGCCCTGAATCAAACCCTTAATTCCTCTTCAAATTCCACCGTCTTCTTCGATCTCCGCCTCAAAAACCAGAACAAAGACAAATCCGTGTTCTACGACTCCATCGCCCTCAATTTGTCTCTCGTCGGGGCTCCGGCGGACGGCGGCGGACGGCGCACGGTGGCGAACTTGACGGAGCCCGGATTCCACCAGGGCCGCGACAAGAAGGCGTTAAAGAAGAACGCCGTCGCAGCTGCCGGAGTGGATTGGAAGGCGGTTTCCCGGAATGGGCCGGCGGTTTTCCGGCTGGATTTGGCGACGGCGGTCAGGTACAAGATCTTGTTCTGGAAGACCAAGAAGGAGAGTCTGAGAGTTGGGGTAGAGGTCAAAGTCAACGGGCAGGGGTTGAAGGATTACCCCGGTGGAATTACGCTCAACTCCGGCGCCTCCGTGACTGGCGGTTTCCCGGTTAGGGTTGTTATTTGGAGTTATTGGGTTTTGGTTTTGTGGATTTTTTGTGGAATTTTGGATGGGAAATCGAATTGAAGTGTTTTTGTTTTTTGCGGTGGGTTTGTTTTGTTTTGACGGAATTTTTGGGCGGCGATTTTCGTCGGAAGTGTCTCCACCGCCCACTCCCGGCGGACGGGAGAATGGTAGAGAAATTAATTAGATATTTTGTGTTTTTTTTTTGGAATTTTATAAATTAAAGATTTGGTTGTTGATGAAATTATTTAAGCTTAATTGACCTGTGCTGTGAGTAATTTCATAACCTTTGAGAGTGTGTGTGAG

Coding sequence (CDS)

ATGTCGGAATCCGGCGGATGCTGCCGGTGCTGCTTCAGCTTCATCTTAACCTCCGGCTTCGCCGCTCTGTTCTTATGGCTCAGCCTTCGAACCCACAAACCCAAATGCTCGATCGAATATTTCTACATTCCAGCCCTGAATCAAACCCTTAATTCCTCTTCAAATTCCACCGTCTTCTTCGATCTCCGCCTCAAAAACCAGAACAAAGACAAATCCGTGTTCTACGACTCCATCGCCCTCAATTTGTCTCTCGTCGGGGCTCCGGCGGACGGCGGCGGACGGCGCACGGTGGCGAACTTGACGGAGCCCGGATTCCACCAGGGCCGCGACAAGAAGGCGTTAAAGAAGAACGCCGTCGCAGCTGCCGGAGTGGATTGGAAGGCGGTTTCCCGGAATGGGCCGGCGGTTTTCCGGCTGGATTTGGCGACGGCGGTCAGGTACAAGATCTTGTTCTGGAAGACCAAGAAGGAGAGTCTGAGAGTTGGGGTAGAGGTCAAAGTCAACGGGCAGGGGTTGAAGGATTACCCCGGTGGAATTACGCTCAACTCCGGCGCCTCCGTGACTGGCGGTTTCCCGGTTAGGGTTGTTATTTGGAGTTATTGGGTTTTGGTTTTGTGGATTTTTTGTGGAATTTTGGATGGGAAATCGAATTGA

Protein sequence

MSESGGCCRCCFSFILTSGFAALFLWLSLRTHKPKCSIEYFYIPALNQTLNSSSNSTVFFDLRLKNQNKDKSVFYDSIALNLSLVGAPADGGGRRTVANLTEPGFHQGRDKKALKKNAVAAAGVDWKAVSRNGPAVFRLDLATAVRYKILFWKTKKESLRVGVEVKVNGQGLKDYPGGITLNSGASVTGGFPVRVVIWSYWVLVLWIFCGILDGKSN

Homology

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BLAST of Sed0026241 vs. NCBI nr
Match: XP_038897087.1 (protein NDR1-like [Benincasa hispida])

HSP 1 Score: 320.9 bits (821), Expect = 8.7e-84
Identity = 160/208 (76.92%), Postives = 176/208 (84.62%), Query Frame = 0


Query: 1   MSESGGCCRCCFSFILTSGFAALFLWLSLRTHKPKCSIEYFYIPALNQTLNSSSNSTVFF 60
           M+ESG CC CCF FI+T+GFAALFLWLSLRTHKPKCSIE+FYIPALNQ+LNS SNST+ F
Sbjct: 1   MTESGWCCHCCFKFIITTGFAALFLWLSLRTHKPKCSIEFFYIPALNQSLNSPSNSTLLF 60

Query: 61  DLRLKNQNKDKSVFYDSIALNLSLVGAPADGGGRRTVANLTEPGFHQGRDKKALKKNAVA 120
           DLRLKNQNKDKSV+YDSI+LNL+LVGAP   G RR V NLT PGFHQGRDKKA +K  V 
Sbjct: 61  DLRLKNQNKDKSVYYDSISLNLTLVGAP--DGTRRPVGNLTVPGFHQGRDKKAFRKETVE 120

Query: 121 AAGVDWKAVSRNGPAVFRLDLATAVRYKILFWKTKKESLRVGVEVKVNGQGLKDYPGGIT 180
           A GVDWKAVSRNGP V RLD ATAVRYKILFWKTK+E+LR+G EVKVN QG KDYP  IT
Sbjct: 121 ARGVDWKAVSRNGPVVVRLDFATAVRYKILFWKTKRENLRLGAEVKVNRQGEKDYPRSIT 180

Query: 181 LNSGASVTGGFPVRVVIWSYWVLVLWIF 209
           LNSGA+V  G  +R VIWS+WV VLW F
Sbjct: 181 LNSGAAVPSGSLMR-VIWSFWVFVLWKF 205

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BLAST of Sed0026241 vs. NCBI nr
Match: KAG7024897.1 (Protein NDR1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 310.8 bits (795), Expect = 9.0e-81
Identity = 157/206 (76.21%), Postives = 173/206 (83.98%), Query Frame = 0


Query: 1   MSESGGCCRCCFSFILTSGFAALFLWLSLRTHKPKCSIEYFYIPALNQTLNSSSNSTVFF 60
           M+E GGCCRCCFSFILTSGFAALFLWLSLRT KPKCSIE+FYIPALNQ+LNS  NSTV F
Sbjct: 1   MTEPGGCCRCCFSFILTSGFAALFLWLSLRTRKPKCSIEHFYIPALNQSLNSPLNSTVSF 60

Query: 61  DLRLKNQNKDKSVFYDSIALNLSLVGAPADGGGRRTVANLTEPGFHQGRDKKALKKNAVA 120
           DLRLKNQNKDKSVFYDS+ LNL+LVGA A GG RR + N+T PGFHQGR KKA +   + 
Sbjct: 61  DLRLKNQNKDKSVFYDSLNLNLTLVGAAA-GGSRRPLGNVTVPGFHQGRGKKAFRNETIE 120

Query: 121 AAGVDWKAVSRNGPAVFRLDLATAVRYKILFWKTKKESLRVGVEVKVNGQGLKDYPGGIT 180
             GVDWKAVSRNG AVFRLDLATAVR+KILFW TK+E+LRVG E KVN QG  +YP GIT
Sbjct: 121 TRGVDWKAVSRNGAAVFRLDLATAVRFKILFWNTKRENLRVGAEFKVNEQGATEYP-GIT 180

Query: 181 LNSGASVTGGFPVRVVIWSYWVLVLW 207
           L+SGA+V  G PVR VIWS+WV VLW
Sbjct: 181 LSSGAAVPDGSPVR-VIWSFWVFVLW 203

[Close]

BLAST of Sed0026241 vs. NCBI nr
Match: KAG6592022.1 (Protein NDR1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 310.5 bits (794), Expect = 1.2e-80
Identity = 157/206 (76.21%), Postives = 173/206 (83.98%), Query Frame = 0


Query: 1   MSESGGCCRCCFSFILTSGFAALFLWLSLRTHKPKCSIEYFYIPALNQTLNSSSNSTVFF 60
           M+E GGCCRCCFSFILTSGFAALFLWLSLRT KPKCSIE+FYIPALNQ+LNS  NSTV F
Sbjct: 1   MTEPGGCCRCCFSFILTSGFAALFLWLSLRTRKPKCSIEHFYIPALNQSLNSPLNSTVSF 60

Query: 61  DLRLKNQNKDKSVFYDSIALNLSLVGAPADGGGRRTVANLTEPGFHQGRDKKALKKNAVA 120
           DLRLKNQNKDKSVFYDS+ LNL+LVGA A GG RR + N+T PGFHQGR KKA +   + 
Sbjct: 61  DLRLKNQNKDKSVFYDSLNLNLTLVGAAA-GGSRRPLGNVTVPGFHQGRGKKAFRNEIIE 120

Query: 121 AAGVDWKAVSRNGPAVFRLDLATAVRYKILFWKTKKESLRVGVEVKVNGQGLKDYPGGIT 180
             GVDWKAVSRNG AVFRLDLATAVR+KILFW TK+E+LRVG E KVN QG  +YP GIT
Sbjct: 121 TRGVDWKAVSRNGAAVFRLDLATAVRFKILFWNTKRENLRVGAEFKVNEQGATEYP-GIT 180

Query: 181 LNSGASVTGGFPVRVVIWSYWVLVLW 207
           L+SGA+V  G PVR VIWS+WV VLW
Sbjct: 181 LSSGAAVPDGSPVR-VIWSFWVFVLW 203

[Close]

BLAST of Sed0026241 vs. NCBI nr
Match: XP_022935836.1 (protein NDR1-like [Cucurbita moschata])

HSP 1 Score: 309.3 bits (791), Expect = 2.6e-80
Identity = 156/206 (75.73%), Postives = 172/206 (83.50%), Query Frame = 0


Query: 1   MSESGGCCRCCFSFILTSGFAALFLWLSLRTHKPKCSIEYFYIPALNQTLNSSSNSTVFF 60
           M+E GGCCRCCFSFILTSGFAALFLWLSLRT KPKCSIE+FYIPALNQ+LNS  NSTV F
Sbjct: 1   MTEPGGCCRCCFSFILTSGFAALFLWLSLRTRKPKCSIEHFYIPALNQSLNSPLNSTVSF 60

Query: 61  DLRLKNQNKDKSVFYDSIALNLSLVGAPADGGGRRTVANLTEPGFHQGRDKKALKKNAVA 120
           DLRLKNQNKDKSVFYDS+ LNL+LVGA A GG RR + N+T PGFHQGR KKA +   + 
Sbjct: 61  DLRLKNQNKDKSVFYDSLNLNLTLVGAAA-GGSRRPLGNVTVPGFHQGRGKKAFRNETIE 120

Query: 121 AAGVDWKAVSRNGPAVFRLDLATAVRYKILFWKTKKESLRVGVEVKVNGQGLKDYPGGIT 180
             GVDWKAVSRNG AVFRLDLATAVR+KILFW TK+E+LRVG E KVN QG  +YP GIT
Sbjct: 121 TRGVDWKAVSRNGAAVFRLDLATAVRFKILFWNTKRENLRVGAEFKVNEQGATEYP-GIT 180

Query: 181 LNSGASVTGGFPVRVVIWSYWVLVLW 207
           L+SG +V  G PVR VIWS+WV VLW
Sbjct: 181 LSSGVAVPDGSPVR-VIWSFWVFVLW 203

[Close]

BLAST of Sed0026241 vs. NCBI nr
Match: XP_023535135.1 (protein NDR1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 306.6 bits (784), Expect = 1.7e-79
Identity = 154/206 (74.76%), Postives = 171/206 (83.01%), Query Frame = 0


Query: 1   MSESGGCCRCCFSFILTSGFAALFLWLSLRTHKPKCSIEYFYIPALNQTLNSSSNSTVFF 60
           M+ESGGCCRCCFSFILTSGFAALFLWLSLRT KPKCSIE+FYIPALNQ+LNS  NSTV F
Sbjct: 1   MTESGGCCRCCFSFILTSGFAALFLWLSLRTRKPKCSIEHFYIPALNQSLNSPLNSTVSF 60

Query: 61  DLRLKNQNKDKSVFYDSIALNLSLVGAPADGGGRRTVANLTEPGFHQGRDKKALKKNAVA 120
           DLRLKNQNKDKSVFYDS+ LNL+LV       GRR + N+T PGFHQGR KKA +   + 
Sbjct: 61  DLRLKNQNKDKSVFYDSLNLNLTLV-------GRRPLGNVTVPGFHQGRGKKAFRNETIE 120

Query: 121 AAGVDWKAVSRNGPAVFRLDLATAVRYKILFWKTKKESLRVGVEVKVNGQGLKDYPGGIT 180
             GVDWKAVSRNG A+FRLDLATAVR+KILFW TK+E+LRVG E KVNGQG  +YP GIT
Sbjct: 121 TRGVDWKAVSRNGSAIFRLDLATAVRFKILFWNTKRENLRVGAEFKVNGQGATEYP-GIT 180

Query: 181 LNSGASVTGGFPVRVVIWSYWVLVLW 207
           L+SGA+V  G PVR VIWS+WV VLW
Sbjct: 181 LSSGAAVLDGSPVR-VIWSFWVFVLW 197

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BLAST of Sed0026241 vs. ExPASy Swiss-Prot
Match: O48915 (Protein NDR1 OS=Arabidopsis thaliana OX=3702 GN=NDR1 PE=1 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 3.6e-40
Identity = 91/197 (46.19%), Postives = 119/197 (60.41%), Query Frame = 0


Query: 7   CCRCCFSFILTSGFAALFLWLSLRTHKPKCSIEYFYIPALNQTLNSSSNSTVFFDLRLKN 66
           CC CC SFI T+G  +LFLWLSLR  KPKCSI+ F+IPAL +  NS  N+T+ F +R  N
Sbjct: 14  CCTCCLSFIFTAGLTSLFLWLSLRADKPKCSIQNFFIPALGKDPNSRDNTTLNFMVRCDN 73

Query: 67  QNKDKSVFYDSIALNLSLVG-APADGGGRRTVANLTEPGFHQGRDKKALKKNAVAAAG-- 126
            NKDK ++YD + LN S +     +      V N T P F+QG  KKA K   V      
Sbjct: 74  PNKDKGIYYDDVHLNFSTINTTKINSSALVLVGNYTVPKFYQGHKKKAKKWGQVKPLNNQ 133

Query: 127 VDWKAVSRNGPAVFRLDLATAVRYKILFWKTKKESLRVGVEVKVNGQGLKDYPGGITL-- 186
              +AV  NG AVFRLDL T VR+KI+FWKTK+  + VG +V+VNG G+K    GI +  
Sbjct: 134 TVLRAVLPNGSAVFRLDLKTQVRFKIVFWKTKRYGVEVGADVEVNGDGVKAQKKGIKMKK 193

Query: 187 -NSGASVTGGFPVRVVI 198
            +S   +   FP+ V++
Sbjct: 194 SDSSFPLRSSFPISVLM 210

[Close]

BLAST of Sed0026241 vs. ExPASy TrEMBL
Match: A0A6J1F5U5 (protein NDR1-like OS=Cucurbita moschata OX=3662 GN=LOC111442624 PE=4 SV=1)

HSP 1 Score: 309.3 bits (791), Expect = 1.3e-80
Identity = 156/206 (75.73%), Postives = 172/206 (83.50%), Query Frame = 0


Query: 1   MSESGGCCRCCFSFILTSGFAALFLWLSLRTHKPKCSIEYFYIPALNQTLNSSSNSTVFF 60
           M+E GGCCRCCFSFILTSGFAALFLWLSLRT KPKCSIE+FYIPALNQ+LNS  NSTV F
Sbjct: 1   MTEPGGCCRCCFSFILTSGFAALFLWLSLRTRKPKCSIEHFYIPALNQSLNSPLNSTVSF 60

Query: 61  DLRLKNQNKDKSVFYDSIALNLSLVGAPADGGGRRTVANLTEPGFHQGRDKKALKKNAVA 120
           DLRLKNQNKDKSVFYDS+ LNL+LVGA A GG RR + N+T PGFHQGR KKA +   + 
Sbjct: 61  DLRLKNQNKDKSVFYDSLNLNLTLVGAAA-GGSRRPLGNVTVPGFHQGRGKKAFRNETIE 120

Query: 121 AAGVDWKAVSRNGPAVFRLDLATAVRYKILFWKTKKESLRVGVEVKVNGQGLKDYPGGIT 180
             GVDWKAVSRNG AVFRLDLATAVR+KILFW TK+E+LRVG E KVN QG  +YP GIT
Sbjct: 121 TRGVDWKAVSRNGAAVFRLDLATAVRFKILFWNTKRENLRVGAEFKVNEQGATEYP-GIT 180

Query: 181 LNSGASVTGGFPVRVVIWSYWVLVLW 207
           L+SG +V  G PVR VIWS+WV VLW
Sbjct: 181 LSSGVAVPDGSPVR-VIWSFWVFVLW 203

[Close]

BLAST of Sed0026241 vs. ExPASy TrEMBL
Match: A0A6J1CEH8 (protein NDR1-like OS=Momordica charantia OX=3673 GN=LOC111010486 PE=4 SV=1)

HSP 1 Score: 306.6 bits (784), Expect = 8.2e-80
Identity = 157/208 (75.48%), Postives = 172/208 (82.69%), Query Frame = 0


Query: 1   MSESGGCCRCCFSFILTSGFAALFLWLSLRTHKPKCSIEYFYIPALNQTLNSSSNSTVFF 60
           M+E+GGC RCCFSFILTSGF ALFLWLSLRTHKPKCSIE FYIPALNQ+LNSSS+STVFF
Sbjct: 1   MTEAGGCGRCCFSFILTSGFTALFLWLSLRTHKPKCSIESFYIPALNQSLNSSSDSTVFF 60

Query: 61  DLRLKNQNKDKSVFYDSIALNLSLVGAPADGGGRRTVANLTEPGFHQGRDKKALKKNAVA 120
           DLRLKNQNKDKSVFYD+I LNL+LV      GGRR V NLT  GFHQGRDKKA +K  V 
Sbjct: 61  DLRLKNQNKDKSVFYDAINLNLTLV-----DGGRRPVGNLTVAGFHQGRDKKAFRKGQVE 120

Query: 121 AAGVDWKAVSRNGPAVFRLDLATAVRYKILFWKTKKESLRVGVEVKVNGQGLKDYPGGIT 180
           A GVDWKAV RNG AVFRLDLATAVRYKILFWKTK+++LRVG EVKVN QG K+YP GIT
Sbjct: 121 ARGVDWKAVRRNGSAVFRLDLATAVRYKILFWKTKRDNLRVGAEVKVNAQGAKEYPHGIT 180

Query: 181 LNSGASVTGGFPVRVVIWSYWVLVLWIF 209
           L+SGA+V G  P    +WS   L+LW F
Sbjct: 181 LSSGAAVAGRSPAG-ALWSVGALILWKF 202

[Close]

BLAST of Sed0026241 vs. ExPASy TrEMBL
Match: A0A5A7TYN2 (Protein NDR1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1251G00260 PE=4 SV=1)

HSP 1 Score: 302.8 bits (774), Expect = 1.2e-78
Identity = 153/209 (73.21%), Postives = 174/209 (83.25%), Query Frame = 0


Query: 1   MSESGGCCRCCFSFILTSGFAALFLWLSLRTHKPKCSIEYFYIPALNQTLNSSSNS-TVF 60
           M+ESG CC+CCF FI+T+GFAALFLWLSLRT KPKCSIE FYIPALNQ+LNSSSNS T++
Sbjct: 1   MTESGWCCKCCFKFIITAGFAALFLWLSLRTRKPKCSIESFYIPALNQSLNSSSNSTTLY 60

Query: 61  FDLRLKNQNKDKSVFYDSIALNLSLVGAPADGGGRRTVANLTEPGFHQGRDKKALKKNAV 120
           FDLRLKNQNKDKSV+YD+I LN +L+        RR V NLT PGFHQGRDKKAL+K +V
Sbjct: 61  FDLRLKNQNKDKSVYYDTIYLNFTLLDE-----ARRPVGNLTVPGFHQGRDKKALRKESV 120

Query: 121 AAAGVDWKAVSRNGPAVFRLDLATAVRYKILFWKTKKESLRVGVEVKVNGQGLKDYPGGI 180
            A GVDWKAVSRNG  + RLDLATAVRYKIL WKTK+E+LR+G E+KVNGQGLKD P GI
Sbjct: 121 EARGVDWKAVSRNGSTIVRLDLATAVRYKILLWKTKRENLRLGTEIKVNGQGLKDNPHGI 180

Query: 181 TLNSGASVTGGFPVRVVIWSYWVLVLWIF 209
           TLNSGA++ GG  VR VIWS+WV V W F
Sbjct: 181 TLNSGAAMPGGTLVR-VIWSFWVFVWWKF 203

[Close]

BLAST of Sed0026241 vs. ExPASy TrEMBL
Match: A0A1S3BZM3 (protein NDR1-like OS=Cucumis melo OX=3656 GN=LOC103494933 PE=4 SV=1)

HSP 1 Score: 302.8 bits (774), Expect = 1.2e-78
Identity = 153/209 (73.21%), Postives = 174/209 (83.25%), Query Frame = 0


Query: 1   MSESGGCCRCCFSFILTSGFAALFLWLSLRTHKPKCSIEYFYIPALNQTLNSSSNS-TVF 60
           M+ESG CC+CCF FI+T+GFAALFLWLSLRT KPKCSIE FYIPALNQ+LNSSSNS T++
Sbjct: 1   MTESGWCCKCCFKFIITAGFAALFLWLSLRTRKPKCSIESFYIPALNQSLNSSSNSTTLY 60

Query: 61  FDLRLKNQNKDKSVFYDSIALNLSLVGAPADGGGRRTVANLTEPGFHQGRDKKALKKNAV 120
           FDLRLKNQNKDKSV+YD+I LN +L+        RR V NLT PGFHQGRDKKAL+K +V
Sbjct: 61  FDLRLKNQNKDKSVYYDTIYLNFTLLDE-----ARRPVGNLTVPGFHQGRDKKALRKESV 120

Query: 121 AAAGVDWKAVSRNGPAVFRLDLATAVRYKILFWKTKKESLRVGVEVKVNGQGLKDYPGGI 180
            A GVDWKAVSRNG  + RLDLATAVRYKIL WKTK+E+LR+G E+KVNGQGLKD P GI
Sbjct: 121 EARGVDWKAVSRNGSTIVRLDLATAVRYKILLWKTKRENLRLGTEIKVNGQGLKDNPHGI 180

Query: 181 TLNSGASVTGGFPVRVVIWSYWVLVLWIF 209
           TLNSGA++ GG  VR VIWS+WV V W F
Sbjct: 181 TLNSGAAMPGGTLVR-VIWSFWVFVWWKF 203

[Close]

BLAST of Sed0026241 vs. ExPASy TrEMBL
Match: A0A6J1IH99 (protein NDR1-like OS=Cucurbita maxima OX=3661 GN=LOC111476935 PE=4 SV=1)

HSP 1 Score: 297.0 bits (759), Expect = 6.5e-77
Identity = 152/206 (73.79%), Postives = 167/206 (81.07%), Query Frame = 0


Query: 1   MSESGGCCRCCFSFILTSGFAALFLWLSLRTHKPKCSIEYFYIPALNQTLNSSSNSTVFF 60
           M+ESGGCCRCCFSFILTSGFAALFLWLSLRT KPKCSIE FYIPALNQ+LNS  NSTV F
Sbjct: 1   MTESGGCCRCCFSFILTSGFAALFLWLSLRTRKPKCSIESFYIPALNQSLNSPLNSTVSF 60

Query: 61  DLRLKNQNKDKSVFYDSIALNLSLVGAPADGGGRRTVANLTEPGFHQGRDKKALKKNAVA 120
           DLRLKNQNKDKSVFYDS+ LNL+LVG        R + N+T PGFHQGR KKA +   + 
Sbjct: 61  DLRLKNQNKDKSVFYDSLNLNLTLVGG-------RPLGNVTVPGFHQGRGKKAFRNETIE 120

Query: 121 AAGVDWKAVSRNGPAVFRLDLATAVRYKILFWKTKKESLRVGVEVKVNGQGLKDYPGGIT 180
           A GVDWKAVSRNG A+FRLDLATAVR+KILFW TK+E+LRVG E KVN QG  +YP GIT
Sbjct: 121 ARGVDWKAVSRNGSAIFRLDLATAVRFKILFWNTKRENLRVGAEFKVNKQGATEYP-GIT 180

Query: 181 LNSGASVTGGFPVRVVIWSYWVLVLW 207
           L+SGA+V  G PV  VIWS WV VLW
Sbjct: 181 LSSGAAVPDGSPV-TVIWSSWVFVLW 197

[Close]

BLAST of Sed0026241 vs. TAIR 10
Match: AT3G20600.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 166.4 bits (420), Expect = 2.6e-41
Identity = 91/197 (46.19%), Postives = 119/197 (60.41%), Query Frame = 0


Query: 7   CCRCCFSFILTSGFAALFLWLSLRTHKPKCSIEYFYIPALNQTLNSSSNSTVFFDLRLKN 66
           CC CC SFI T+G  +LFLWLSLR  KPKCSI+ F+IPAL +  NS  N+T+ F +R  N
Sbjct: 14  CCTCCLSFIFTAGLTSLFLWLSLRADKPKCSIQNFFIPALGKDPNSRDNTTLNFMVRCDN 73

Query: 67  QNKDKSVFYDSIALNLSLVG-APADGGGRRTVANLTEPGFHQGRDKKALKKNAVAAAG-- 126
            NKDK ++YD + LN S +     +      V N T P F+QG  KKA K   V      
Sbjct: 74  PNKDKGIYYDDVHLNFSTINTTKINSSALVLVGNYTVPKFYQGHKKKAKKWGQVKPLNNQ 133

Query: 127 VDWKAVSRNGPAVFRLDLATAVRYKILFWKTKKESLRVGVEVKVNGQGLKDYPGGITL-- 186
              +AV  NG AVFRLDL T VR+KI+FWKTK+  + VG +V+VNG G+K    GI +  
Sbjct: 134 TVLRAVLPNGSAVFRLDLKTQVRFKIVFWKTKRYGVEVGADVEVNGDGVKAQKKGIKMKK 193

Query: 187 -NSGASVTGGFPVRVVI 198
            +S   +   FP+ V++
Sbjct: 194 SDSSFPLRSSFPISVLM 210

[Close]

BLAST of Sed0026241 vs. TAIR 10
Match: AT3G20590.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 150.2 bits (378), Expect = 1.9e-36
Identity = 84/171 (49.12%), Postives = 105/171 (61.40%), Query Frame = 0


Query: 7   CCRCCFSFILTSGFAALFLWLSLRTHKPKCSIEYFYIPALNQTLNSSSNSTVFFDLRLKN 66
           CC C F FI T+   AL LWLSLR  KPKCSI+ FYIPAL++ L+S  N+T+ F +R  N
Sbjct: 14  CCTCFFKFIFTTRLGALILWLSLRAKKPKCSIQNFYIPALSKNLSSRDNTTLNFMVRCDN 73

Query: 67  QNKDKSVFYDSIALNLSLVGAPADGGGRRT-VANLTEPGFHQGRDKKALKKNAVAAAG-- 126
            NKDK ++YD + L  S +            VAN T P F+QG  KKA K   V      
Sbjct: 74  PNKDKGIYYDDVHLTFSTINTTTTNSSDLVLVANYTVPKFYQGHKKKAKKWGQVWPLNNQ 133

Query: 127 VDWKAVSRNGPAVFRLDLATAVRYKILFWKTK-KESLRVGVEVKVNGQGLK 174
              +AV  NG AVFRLDL T VR+KI+FWKTK    ++VG +V+VNG G+K
Sbjct: 134 TVLRAVLPNGSAVFRLDLKTHVRFKIVFWKTKWYRRIKVGADVEVNGDGVK 184

[Close]

BLAST of Sed0026241 vs. TAIR 10
Match: AT3G20610.1 (non-race specific disease resistance protein, putative )

HSP 1 Score: 115.9 bits (289), Expect = 4.0e-26
Identity = 72/175 (41.14%), Postives = 100/175 (57.14%), Query Frame = 0


Query: 13  SFILTSGFAALFLWLS-LRTHKPKCSIEYFYIPALNQTLNSSSNSTVFFDLRLKNQNKDK 72
           + +  S   AL LWLS L  H P+CSI YFYIPALN++L SS N+T+ F +RLKN N  +
Sbjct: 19  TLLYVSFLLALCLWLSTLVHHIPRCSIHYFYIPALNKSLISSDNTTLNFMVRLKNINAKQ 78

Query: 73  SVFYDSIALNLSLVGAPADGGGRRTVANLTEPGFHQGRDKKALKKNAVAAAGVDW--KAV 132
            ++Y+ + L+ S             VAN T P F+QG +KKA K             +AV
Sbjct: 79  GIYYEDLHLSFS----TRINNSSLLVANYTVPRFYQGHEKKAKKWGQALPFNNQTVIQAV 138

Query: 133 SRNGPAVFRLDLATAVRYKILFWKTKKESLRVGVEVKVNGQG---LKDYPGGITL 182
             NG A+FR+DL   V+YK++ WKTK+  L+  V ++VN  G   +KD   GI +
Sbjct: 139 LPNGSAIFRVDLKMQVKYKVMSWKTKRYKLKASVNLEVNEDGATKVKDKEDGIKM 189

[Close]

BLAST of Sed0026241 vs. TAIR 10
Match: AT4G05220.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 55.1 bits (131), Expect = 8.3e-08
Identity = 45/172 (26.16%), Postives = 74/172 (43.02%), Query Frame = 0


Query: 11  CFSFILT---SGFAALFLWLSLRTHKPKCSIEYFYIPALNQTLNSSSNSTVFFDLRLKNQ 70
           C  F+L     G  A  LWLSLR H+P+  I+ F +  L+Q      N+ + F++ + N 
Sbjct: 47  CAMFLLVLFFVGVIAFILWLSLRPHRPRFHIQDFVVQGLDQP-TGVENARIAFNVTILNP 106

Query: 71  NKDKSVFYDSIALNLSLVGAPADGGGRRTVANLTEPGFHQGRDKKALKKNAVAAA----G 130
           N+   V++D      S+ G+      R  +  L  P F Q  +   +      A+     
Sbjct: 107 NQHMGVYFD------SMEGSIYYKDQRVGLIPLLNPFFQQPTNTTIVTGTLTGASLTVNS 166

Query: 131 VDWKAVSRN---GPAVFRLDLATAVRYKILFWKTKKESLRVGVEVKVNGQGL 173
             W   S +   G   FRLD+ + +R+K+  W +K   +     + V   GL
Sbjct: 167 NRWTEFSNDRAQGTVGFRLDIVSTIRFKLHRWISKHHRMHANCNIVVGRDGL 211

The following BLAST results are available for this feature:

BLAST of Sed0026241 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038897087.1	8.7e-84	76.92	protein NDR1-like [Benincasa hispida]	[more]
KAG7024897.1	9.0e-81	76.21	Protein NDR1, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6592022.1	1.2e-80	76.21	Protein NDR1, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022935836.1	2.6e-80	75.73	protein NDR1-like [Cucurbita moschata]	[more]
XP_023535135.1	1.7e-79	74.76	protein NDR1-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Sed0026241 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O48915	3.6e-40	46.19	Protein NDR1 OS=Arabidopsis thaliana OX=3702 GN=NDR1 PE=1 SV=1	[more]

BLAST of Sed0026241 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F5U5	1.3e-80	75.73	protein NDR1-like OS=Cucurbita moschata OX=3662 GN=LOC111442624 PE=4 SV=1	[more]
A0A6J1CEH8	8.2e-80	75.48	protein NDR1-like OS=Momordica charantia OX=3673 GN=LOC111010486 PE=4 SV=1	[more]
A0A5A7TYN2	1.2e-78	73.21	Protein NDR1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1251G0...	[more]
A0A1S3BZM3	1.2e-78	73.21	protein NDR1-like OS=Cucumis melo OX=3656 GN=LOC103494933 PE=4 SV=1	[more]
A0A6J1IH99	6.5e-77	73.79	protein NDR1-like OS=Cucurbita maxima OX=3661 GN=LOC111476935 PE=4 SV=1	[more]

BLAST of Sed0026241 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G20600.1	2.6e-41	46.19	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT3G20590.1	1.9e-36	49.12	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT3G20610.1	4.0e-26	41.14	non-race specific disease resistance protein, putative	[more]
AT4G05220.1	8.3e-08	26.16	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR044839	Protein NDR1-like	PANTHER	PTHR31415	OS05G0367900 PROTEIN	coord: 1..188
None	No IPR available	PANTHER	PTHR31415:SF52	LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY-RELATED	coord: 1..188

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0026241.1	Sed0026241.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0098542	defense response to other organism
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane