Sed0026200 (gene) Chayote v1

Overview
NameSed0026200
Typegene
OrganismSechium edule (Chayote v1)
DescriptionWRKY domain-containing protein
LocationLG05: 45793908 .. 45797743 (-)
RNA-Seq ExpressionSed0026200
SyntenySed0026200
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTGTTTTCACAATAGGTCCATTATTTTCCAATGGCCAGCTTCCCTCATGAAGATCCAAACCCTAATTCTAACCCTAACCCTTATTACACTCATTTCCCACCAATTCTCGACCATACTTCCTTCTTCGATTTCGAGATCTCTGATTTTCTCGTGTTCGGTGACGACGAAAACAGCGTCGACCAACAAGCTGCATCGTCGTCACCGAGCATCCTCTCGTCAGAGAAGATCACGGGAGTGGACAGTGGTGGCAGTGGCACTGCAGCCGACAGCGGATCGAGCGTCGTAGTTTCGTCGGGTAGGCCGACATCCATGTAAGTCCCTTTAATTAGCCCTTTAATTAAATTTTTTTTTCTAATTAAATGTTGAATATGATTTGTGTTACTATAGAAGATCAAGCAAAAGTGGGGAGAAGAAAAGGAAAGGGGAAATAGGGCGTAGGGTTGCATTCAGAACCAAATCAGAAGTAGAGATTATGGATGATGGCTACAAATGGAGAAAATATGGCAAAAAGTCTGTTAAGAACAGCCCAAATCCCAGGTAATTAATTACTTTCTTAAAATTAAACTCCACAAAATATATATTTACAAACTATTAGGTTTAAGTTGTTTTAACACAATAATAACAAATGAACAACTCAGCCGCTTGTAACCCATGAATCAATGGTTCAAATTCCCGAATCCCAATTGTTGAACAAAAAAAAAAATTATGATTATCTTGATAGAGTTAGATTTAATTGGTCATATGGTAATTTTTTATTAGGGTTACCAATTCATGACGTTTTTTTCTACTTCCACGTTATATGAGTGAGAACATGAACTTCTATTATTTGGGATATATAACTTTTCATAACTTTTTAAGTTAGGCCTACTAATTAAGAGAATTTTGAGTAGGGGTGAAGATGCTAATTTCTTATATCGATAAGATATATGAGTTACATTATTTATGACATGAAATTTATCAAATTAGGTATATTTGATTTAATAAAAATATTGGATAGAAGTTGACTTAAACACTTACTACTAAACAAATGAATATCTTTACTCAAAAAACAAAACAAAACAAATATATATATATATATATAAAAGCACAAGAAGTATTTGATGAATAATTGCATAAACAATTATTTTGAGTGATTGAAAATTAGTGAAATAATAATAATTCGTTTGAATGTATAATTTTGTAAAAACAAATTGTTTGGATATGTATTTTTATAGTAGAGTTCAGCTTGATATACATTTTGTAGAGGGTTGAAGAAATAAGTGTCAGTATTATTAGAAATGAATAATTATTTTGAAACTAAACCTTCGATAATATTTTAATTAATGGAGAGATGTTTAATTGGGTTGTCAAAGACCACGTTGGAGGCGGCTAGAGTAGTCAAAGCATACGGCAATAAAGTTATAGATAATATATATTTGGTGTGTAATTCACAATCGGTTTATGAGAGAGAGAAGACTTGTGATAAAAACAAAGCAGTCAACTTTATATTTTGTGTGCTCAAAAAAAAAAAAAAAAACTTTATATTTTGTTCTCAATACTTTGTCATTTCTAGGCTATTTTATTTTTATTGTAATTGATTGGTTTATTAGGCTCTCTTGTGGACCATAGGCTTTTAACTTAGTCTAAGCTTTTGGTCATTTTTTATTGTTATTATAATTTATGAAAATCTAATGGAGGCAGACATACTTTTATTTATTTATTTACTTTTTTTTTTTTAGTTTTATCATAAATTGAGAGACGATTTGAATTTATATAGATTTGGAAAGAATTGGTCACATGTTTATTGTTTTCGTTGTCACATTATTTTTTTTACCTAATAAACATAATATAAGATATTTGTCTTTATCAATTTTCAAAACAATTTGATATGTAAATTAAATAATTAATAAAATGTTACCATCAATTAACTAAAAAAATGATTCTTCTATATAAAAATAAGAGGATTAAAGAAAATACTAAAGAAAAGAAAAATTAATGGTCAAAATAAAACAAATATCAAAGAAGAAAGGATGAAAAAAAAGGATTTGGACCTATTAAATAAAGGAGATTTTTTCCGGAGTTGGAAAGAAATGGAAAAAAAATCAATAAATTTAAATATAGTAACAATTAATTCAAATTAAATGGATAGATTTCAGTTAAATTAAATTTATAGGGCTAGATTTCAATGTTTTTTTAGATTTCAATCAAATTAAACTTGAAGTATTTTGATATGTATACATTTTTTTTGAAAATTTTACTACAATTAAAATAGGAATACTAAAGTTTGCTATCAACCACTACTTTTCTTAAATAAAATATATATGGCTCTTCAAAATAAAATAAAATAAAATACATTTGGGTGTTCTTTTCTTTTATTTAAACAAAGTTCATCAATGCCTCAAACTAAGTATAAAATTTTCTATGTAATAGTAGGTACAACATTTTTTTTCCTTTGTTTCTTTTGGATTTTAGTGGGTACAATTTTCATTCTTATCACTTTGACATCTAGAATATGGTTTACTTTATTGGAACAGTTACTCGAATTTCGTTATGCAAAGTTTACACATGAAACACGCATTTACATAATAAATCTATGATATATTTTCTTGTTTTCACTTTATGCGTTTGAGTACCGAGCTAATTGTAACTATATTAGGTAAATTAATTAGAATGGGTTAATCTAATGATTGGATCAAATGATTTTGATGCATTAAAAAGTTTGGTAGATGAATTTATGGTGACCACCTAATTTTTTTTTTTTAGTACACAGTTAAATTTTTTTCCCAAGTTCATTTACACTCAAATATAGTAAGATAGGTGGGTTATCCCAAGTAGTCAAAAGAGAGAAAAAAACAAAACAAAATATGATATATTTTAGATTTTGTTTTATTTGATGTATGTATAATTTTAATCTTCGTGCTTCAAAAAATAAAAATAGGACCTAATTGTAGGTTTCTAGTTGGTTTTTCCTAAAACCAAATTATATTTCTTTATTAACTTTTCATCTATATATTTTACAAATAAATTTACATTTTGTAATTTTTTGTATTAAAATTATTATCATTTTTTAAAAAACTGGAAATCGGAGTTTCGCCCTACTATACTTAGGGTAATCACGCTCGTCCTTAGGTCAGGTATTGAGGAATATCGAAAGAATAAAGACATAGGAAGTGTCTACAAATTAATGTCACAAATGAGTTCAAACCTGAGACCTTGAGGGAAGCATCCCTTCAAAACCCAAATTTTCAACCATTATGTCACTCCTTAAGGATATATTAAAATTATTTTCATTTAACCGAATTCAATTAAAACTAACTTCAAACTTATTATATAAGAATCTAGTTTTTTTTTTATAGAGTAGGTAGATTAAATTCAACATTTAAAATTTTGGAAACAAAATAAACAAACCACAAAATGCAGGACCAAAATGTTATTTTATGCATAAAACTATTAACATTGGGTAAAACTTGCAAATAGATATTTCATGTTAATTTAACTATAAATCTAACTACAATATGAAACTTGGTTTTATGAGAAAATAAAAAATAAAATACATACAACATGGTTTTGATAAAAGTGTGATTTTTATTTGGTACAGAAATTACTATAAATGTTCAAGTGAAGGATGCAGTGTGAAAAAAAAGGTGGAAAGAGATAGAGAAGATGCAAGCTATGTGATAACTAGTTATGAGGGAGTACACAACCATGAGAGTCCCTTTGTTGTGTATTACAATCAAATGCCTTCCTTTAACTCTACTCCTACTTAACTAACTCATCAAATTACTTGCAACATTCTCTACTTTTATTTCCATGTACATGATTCAATTTTGTACAAATATTAGAATAGATAAGTGGAG

mRNA sequence

CTGTTTTCACAATAGGTCCATTATTTTCCAATGGCCAGCTTCCCTCATGAAGATCCAAACCCTAATTCTAACCCTAACCCTTATTACACTCATTTCCCACCAATTCTCGACCATACTTCCTTCTTCGATTTCGAGATCTCTGATTTTCTCGTGTTCGGTGACGACGAAAACAGCGTCGACCAACAAGCTGCATCGTCGTCACCGAGCATCCTCTCGTCAGAGAAGATCACGGGAGTGGACAGTGGTGGCAGTGGCACTGCAGCCGACAGCGGATCGAGCGTCGTAGTTTCGTCGGGTAGGCCGACATCCATAAGATCAAGCAAAAGTGGGGAGAAGAAAAGGAAAGGGGAAATAGGGCGTAGGGTTGCATTCAGAACCAAATCAGAAGTAGAGATTATGGATGATGGCTACAAATGGAGAAAATATGGCAAAAAGTCTGTTAAGAACAGCCCAAATCCCAGAAATTACTATAAATGTTCAAGTGAAGGATGCAGTGTGAAAAAAAAGGTGGAAAGAGATAGAGAAGATGCAAGCTATGTGATAACTAGTTATGAGGGAGTACACAACCATGAGAGTCCCTTTGTTGTGTATTACAATCAAATGCCTTCCTTTAACTCTACTCCTACTTAACTAACTCATCAAATTACTTGCAACATTCTCTACTTTTATTTCCATGTACATGATTCAATTTTGTACAAATATTAGAATAGATAAGTGGAG

Coding sequence (CDS)

ATGGCCAGCTTCCCTCATGAAGATCCAAACCCTAATTCTAACCCTAACCCTTATTACACTCATTTCCCACCAATTCTCGACCATACTTCCTTCTTCGATTTCGAGATCTCTGATTTTCTCGTGTTCGGTGACGACGAAAACAGCGTCGACCAACAAGCTGCATCGTCGTCACCGAGCATCCTCTCGTCAGAGAAGATCACGGGAGTGGACAGTGGTGGCAGTGGCACTGCAGCCGACAGCGGATCGAGCGTCGTAGTTTCGTCGGGTAGGCCGACATCCATAAGATCAAGCAAAAGTGGGGAGAAGAAAAGGAAAGGGGAAATAGGGCGTAGGGTTGCATTCAGAACCAAATCAGAAGTAGAGATTATGGATGATGGCTACAAATGGAGAAAATATGGCAAAAAGTCTGTTAAGAACAGCCCAAATCCCAGAAATTACTATAAATGTTCAAGTGAAGGATGCAGTGTGAAAAAAAAGGTGGAAAGAGATAGAGAAGATGCAAGCTATGTGATAACTAGTTATGAGGGAGTACACAACCATGAGAGTCCCTTTGTTGTGTATTACAATCAAATGCCTTCCTTTAACTCTACTCCTACTTAA

Protein sequence

MASFPHEDPNPNSNPNPYYTHFPPILDHTSFFDFEISDFLVFGDDENSVDQQAASSSPSILSSEKITGVDSGGSGTAADSGSSVVVSSGRPTSIRSSKSGEKKRKGEIGRRVAFRTKSEVEIMDDGYKWRKYGKKSVKNSPNPRNYYKCSSEGCSVKKKVERDREDASYVITSYEGVHNHESPFVVYYNQMPSFNSTPT
Homology
BLAST of Sed0026200 vs. NCBI nr
Match: XP_038901292.1 (probable WRKY transcription factor 51 isoform X1 [Benincasa hispida])

HSP 1 Score: 309.3 bits (791), Expect = 2.4e-80
Identity = 167/205 (81.46%), Postives = 178/205 (86.83%), Query Frame = 0

Query: 1   MASFPHED------PNPNSNPNPYYTHFPPILDHTSFFDFEISDFLVFGDDENSVDQQAA 60
           MASFP+ED      PN N NPNP YTHFPPILD +SFFDFE+SDF VF DD N+VD Q A
Sbjct: 1   MASFPYEDSNPNLNPNSNLNPNPNYTHFPPILDPSSFFDFEMSDFFVFDDDNNNVD-QVA 60

Query: 61  SSSPSILSSEKITGVDSGGSGTAADSGSSVVVSSGRPTSIRSSKSGEKKRKGEIGRRVAF 120
           SSSPS+ SSEKIT VDSGGS    DSGSS+VVSSG  TSIR SK+GEKKRKGE+G RVAF
Sbjct: 61  SSSPSMTSSEKITEVDSGGSSAVIDSGSSLVVSSGASTSIR-SKNGEKKRKGEMGCRVAF 120

Query: 121 RTKSEVEIMDDGYKWRKYGKKSVKNSPNPRNYYKCSSEGCSVKKKVERDREDASYVITSY 180
           RTKSE EIMDDGYKWRKYGKKSVKNSPNPRNYYKCSSEGC+VKKKVERDREDASYVIT+Y
Sbjct: 121 RTKSEQEIMDDGYKWRKYGKKSVKNSPNPRNYYKCSSEGCNVKKKVERDREDASYVITTY 180

Query: 181 EGVHNHESPFVVYYNQMPSFNSTPT 200
           EGVHNHESPFVVYYNQ+PSF STPT
Sbjct: 181 EGVHNHESPFVVYYNQIPSFRSTPT 203

BLAST of Sed0026200 vs. NCBI nr
Match: XP_004148451.1 (probable WRKY transcription factor 51 [Cucumis sativus] >KAE8651959.1 hypothetical protein Csa_006699 [Cucumis sativus])

HSP 1 Score: 297.4 bits (760), Expect = 9.5e-77
Identity = 161/203 (79.31%), Postives = 174/203 (85.71%), Query Frame = 0

Query: 1   MASFPHEDPNPNSNPNP-YYTHFPPILDHTSFFDFEISDFLVFGDDENSVDQQAASSSPS 60
           MASFP+ED N N NPNP  YTHFPPILD  SFFDFE+SDFL+FGDD N V  Q ASSSPS
Sbjct: 1   MASFPYEDSNLNPNPNPNNYTHFPPILDPASFFDFELSDFLLFGDDNNIVVDQVASSSPS 60

Query: 61  ILSSEKIT--GVDSGGSGTAADSGSSVVV-SSGRPTSIRSSKSGEKKRKGEIGRRVAFRT 120
           + SSEKIT  GVDSGGS T  D+GSSVVV SSG  T+   SK+GEKKRKGE+G RVAFRT
Sbjct: 61  MTSSEKITSGGVDSGGSSTVIDTGSSVVVSSSGASTTSIRSKNGEKKRKGEMGCRVAFRT 120

Query: 121 KSEVEIMDDGYKWRKYGKKSVKNSPNPRNYYKCSSEGCSVKKKVERDREDASYVITSYEG 180
           KSE EIMDDGYKWRKYGKKSVKNSPNPRNYYKCSSEGC+VKKKVERDREDA+YVIT+YEG
Sbjct: 121 KSEQEIMDDGYKWRKYGKKSVKNSPNPRNYYKCSSEGCNVKKKVERDREDANYVITTYEG 180

Query: 181 VHNHESPFVVYYNQMPSFNSTPT 200
           +HNHESPFVVYYNQ+PSF S  T
Sbjct: 181 IHNHESPFVVYYNQLPSFTSAST 203

BLAST of Sed0026200 vs. NCBI nr
Match: XP_008457906.1 (PREDICTED: probable WRKY transcription factor 51 [Cucumis melo])

HSP 1 Score: 289.7 bits (740), Expect = 2.0e-74
Identity = 159/212 (75.00%), Postives = 176/212 (83.02%), Query Frame = 0

Query: 1   MASFPHEDPNP-----NSNPNPYYTHFPPILDHTSFFDFEISDFLVFGD----DENSVDQ 60
           MASFP+ED NP     N NPN YYT FPPILD  SFFDFE+SDFL+F D    + N++  
Sbjct: 1   MASFPYEDSNPNPNNLNPNPNHYYTPFPPILDPASFFDFELSDFLLFDDNNNNNNNNIVD 60

Query: 61  QAASSSPSILSSEKIT---GVDSGGSGTAADSGSSVVVSSGRPTSIRSSKSGEKKRKGEI 120
           QAASSSPS+ SSEKIT   GVDS GS T  D+GSS+VVSSG  T+   SK+GEKKRKGE+
Sbjct: 61  QAASSSPSMTSSEKITGGGGVDSSGSSTVIDTGSSIVVSSGASTTSIRSKNGEKKRKGEM 120

Query: 121 GRRVAFRTKSEVEIMDDGYKWRKYGKKSVKNSPNPRNYYKCSSEGCSVKKKVERDREDAS 180
           G RVAFRTKSE EIMDDGYKWRKYGKKSVKNSPNPRNYYKCSSEGC+VKKKVERDREDA+
Sbjct: 121 GCRVAFRTKSEQEIMDDGYKWRKYGKKSVKNSPNPRNYYKCSSEGCNVKKKVERDREDAN 180

Query: 181 YVITSYEGVHNHESPFVVYYNQMPSF-NSTPT 200
           YVIT+YEG+HNHESPFVVYYNQ+PSF  STPT
Sbjct: 181 YVITTYEGIHNHESPFVVYYNQLPSFTTSTPT 212

BLAST of Sed0026200 vs. NCBI nr
Match: XP_022157717.1 (probable WRKY transcription factor 51 [Momordica charantia])

HSP 1 Score: 282.0 bits (720), Expect = 4.1e-72
Identity = 147/194 (75.77%), Postives = 163/194 (84.02%), Query Frame = 0

Query: 1   MASFPHEDPNPNSNPNPYYTHFPPILDHTSFFDFEISDFLVFGDDENSVDQQAASSSPSI 60
           MASFP +DPNP  NPNP YTHFPPILD + FFDF++SD+L+  DD  ++D QAASSSPSI
Sbjct: 1   MASFPQQDPNP--NPNPNYTHFPPILDPSVFFDFDLSDYLMLNDDNINIDDQAASSSPSI 60

Query: 61  LSSEKITGVDSGGSGTAADSGSSVVVSSGRPTSIRSSKSGEKKRKGEIGRRVAFRTKSEV 120
            SSEKITGVDSG S    DSGSS V SSG  +S+       KK+K ++G RVAFRTKSE 
Sbjct: 61  ASSEKITGVDSGNSCAVVDSGSSTVASSGATSSMNEG----KKKKEDVGCRVAFRTKSEQ 120

Query: 121 EIMDDGYKWRKYGKKSVKNSPNPRNYYKCSSEGCSVKKKVERDREDASYVITSYEGVHNH 180
           EIMDDGYKWRKYGKKSVKNSPNPRNYYKCSSEGC+VKKKVERDREDASYVIT+YEG+HNH
Sbjct: 121 EIMDDGYKWRKYGKKSVKNSPNPRNYYKCSSEGCTVKKKVERDREDASYVITTYEGIHNH 180

Query: 181 ESPFVVYYNQMPSF 195
           ESPFVVYYNQMPSF
Sbjct: 181 ESPFVVYYNQMPSF 188

BLAST of Sed0026200 vs. NCBI nr
Match: XP_022927982.1 (probable WRKY transcription factor 51 [Cucurbita moschata])

HSP 1 Score: 278.9 bits (712), Expect = 3.5e-71
Identity = 154/199 (77.39%), Postives = 169/199 (84.92%), Query Frame = 0

Query: 1   MASFPHEDPNPNSNPNPYYTHFPPILDHTSFFDFEISDFLVFGDDENSVDQQAASSSPSI 60
           MASFP+EDPNP  NPNP +T F PILD  SFFDF++S+FLV GDD++ VDQ A+S     
Sbjct: 1   MASFPYEDPNP--NPNPNFTQFSPILDPASFFDFDLSNFLV-GDDDSYVDQLASS----- 60

Query: 61  LSSEKITGVDSGGSGTAADSGSSVVVSSGRPTSIRSSKSGEKKRKGEIGRRVAFRTKSEV 120
            SSEKITGVDSGGS  A DSGSS VVSS    SIR SK+GE+KRKGE+G RVAFRTKSE 
Sbjct: 61  -SSEKITGVDSGGSSVAVDSGSSFVVSSEPSPSIR-SKNGERKRKGEMGCRVAFRTKSEQ 120

Query: 121 EIMDDGYKWRKYGKKSVKNSPNPRNYYKCSSEGCSVKKKVERDREDASYVITSYEGVHNH 180
           EIMDDGYKWRKYGKKSVKNSPNPRNYYKCSSEGC+VKKKVERDREDASYVIT+YEG+HNH
Sbjct: 121 EIMDDGYKWRKYGKKSVKNSPNPRNYYKCSSEGCNVKKKVERDREDASYVITTYEGIHNH 180

Query: 181 ESPFVVYYNQMPSFNSTPT 200
           ESPFVVYYNQ+PS  ST T
Sbjct: 181 ESPFVVYYNQIPSLTSTST 189

BLAST of Sed0026200 vs. ExPASy Swiss-Prot
Match: Q93WU9 (Probable WRKY transcription factor 51 OS=Arabidopsis thaliana OX=3702 GN=WRKY51 PE=1 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 2.4e-38
Identity = 98/191 (51.31%), Postives = 130/191 (68.06%), Query Frame = 0

Query: 10  NPNSNPNPYYTHFP------PILDHTSFFDFEISDFLVFGDDE---NSVDQQAASSSPSI 69
           N + NP+P +T+F       P +D+  F     S+ + F  DE   N + ++  SS  SI
Sbjct: 2   NISQNPSPNFTYFSDENFINPFMDNNDF-----SNLMFFDIDEGGNNGLIEEEISSPTSI 61

Query: 70  LSSEKITGVDSGGSGTAADSGSSVVVSSGRPTSIRSSKSGEKKRKGEIGRRVAFRTKSEV 129
           +SSE  TG +SGGSG+A          S + ++ R SK  ++ +  E G RVAFRT+S++
Sbjct: 62  VSSETFTG-ESGGSGSA-------TTLSKKESTNRGSKESDQTK--ETGHRVAFRTRSKI 121

Query: 130 EIMDDGYKWRKYGKKSVKNSPNPRNYYKCSSEGCSVKKKVERDREDASYVITSYEGVHNH 189
           ++MDDG+KWRKYGKKSVKN+ N RNYYKCSSEGCSVKK+VERD +DA+YVIT+YEGVHNH
Sbjct: 122 DVMDDGFKWRKYGKKSVKNNINKRNYYKCSSEGCSVKKRVERDGDDAAYVITTYEGVHNH 177

Query: 190 ESPFVVYYNQM 192
           ES   VYYN+M
Sbjct: 182 ESLSNVYYNEM 177

BLAST of Sed0026200 vs. ExPASy Swiss-Prot
Match: Q8VWQ5 (Probable WRKY transcription factor 50 OS=Arabidopsis thaliana OX=3702 GN=WRKY50 PE=2 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 2.1e-26
Identity = 75/159 (47.17%), Postives = 101/159 (63.52%), Query Frame = 0

Query: 27  DHTSFFDF---EISDFLVFGDDENSVDQQAASSSPSILSSEKITGVDSGGSGTAADSGSS 86
           D  S F+F   ++SD   + DD+        + S    +S+    + SG S   +   S 
Sbjct: 15  DTHSVFEFPELDLSD--EWMDDDLVSAVSGMNQSYGYQTSDVAGALFSGSSSCFSHPESP 74

Query: 87  VVVSSGRPTSIRSSKSGEKKRKGEIGRRVAFRTKSEVEIMDDGYKWRKYGKKSVKNSPNP 146
              +    T+  S+ +  KK K +I  RVAF+T+SEVE++DDG+KWRKYGKK VKNSP+P
Sbjct: 75  STKTYVAATATASADNQNKKEKKKIKGRVAFKTRSEVEVLDDGFKWRKYGKKMVKNSPHP 134

Query: 147 RNYYKCSSEGCSVKKKVERDREDASYVITSYEGVHNHES 183
           RNYYKCS +GC VKK+VERDR+D S+VIT+YEG HNH S
Sbjct: 135 RNYYKCSVDGCPVKKRVERDRDDPSFVITTYEGSHNHSS 171

BLAST of Sed0026200 vs. ExPASy Swiss-Prot
Match: Q9S763 (Probable WRKY transcription factor 45 OS=Arabidopsis thaliana OX=3702 GN=WRKY45 PE=1 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 3.7e-23
Identity = 52/96 (54.17%), Postives = 72/96 (75.00%), Query Frame = 0

Query: 85  VVSSGRPTSIRSSKSGEKKRKGEIGRRVAFRTKSEVEIMDDGYKWRKYGKKSVKNSPNPR 144
           V +S +PT+    K   KK+K E   R AF+T+S+V+I+DDGY+WRKYG+K+VKN+P PR
Sbjct: 26  VDNSAQPTTSSEEKPRSKKKKKEREARYAFQTRSQVDILDDGYRWRKYGQKAVKNNPFPR 85

Query: 145 NYYKCSSEGCSVKKKVERDREDASYVITSYEGVHNH 181
           +YYKC+ EGC VKK+V+R   D   V+T+Y+GVH H
Sbjct: 86  SYYKCTEEGCRVKKQVQRQWGDEGVVVTTYQGVHTH 121

BLAST of Sed0026200 vs. ExPASy Swiss-Prot
Match: Q93WV4 (WRKY transcription factor 71 OS=Arabidopsis thaliana OX=3702 GN=WRKY71 PE=2 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 2.4e-22
Identity = 54/99 (54.55%), Postives = 75/99 (75.76%), Query Frame = 0

Query: 85  VVSSGRPTSIRSSKSGEKKRKGEIGRRVAFRTKSEVEIMDDGYKWRKYGKKSVKNSPNPR 144
           V  S +  + +  K GEKK + E+  RVAF TKSE++ ++DGY+WRKYG+K+VKNSP PR
Sbjct: 100 VGESSKQLTKQGKKKGEKKER-EV--RVAFMTKSEIDHLEDGYRWRKYGQKAVKNSPYPR 159

Query: 145 NYYKCSSEGCSVKKKVERDREDASYVITSYEGVHNHESP 184
           +YY+C+++ C+VKK+VER  +D S VIT+YEG HNH  P
Sbjct: 160 SYYRCTTQKCNVKKRVERSFQDPSIVITTYEGKHNHPIP 195

BLAST of Sed0026200 vs. ExPASy Swiss-Prot
Match: Q9SJ09 (Probable WRKY transcription factor 59 OS=Arabidopsis thaliana OX=3702 GN=WRKY59 PE=2 SV=2)

HSP 1 Score: 101.3 bits (251), Expect = 1.3e-20
Identity = 74/183 (40.44%), Postives = 101/183 (55.19%), Query Frame = 0

Query: 10  NPNSNPNPYYTHFPPILDHTSFFDFEISDFLVFGDDENSVDQQAASSSPSI--LSSEKIT 69
           N  SNPNP  T      D T FF F+  D   F      + ++  SSSP++   SSEK+ 
Sbjct: 2   NYPSNPNPSST------DFTEFFKFDDFDD-TFEKIMEEIGREDHSSSPTLSWSSSEKLV 61

Query: 70  GVDSGGSGTAADSGSSVVVSSGRPTSIRSSKSGEKKRKGEIGRRVAFRTKSEVE---IMD 129
             +       + + S +    G    I+     ++KR  E      F+TKS ++    +D
Sbjct: 62  AAEITSPLQTSLATSPMSFEIGDKDEIK-----KRKRHKEDPIIHVFKTKSSIDEKVALD 121

Query: 130 DGYKWRKYGKKSVKNSPNPRNYYKCSSEGCSVKKKVERDREDASYVITSYEGVHNHESPF 188
           DGYKWRKYGKK +  SP PR+Y+KCSS  C+VKKK+ERD  +  Y++T+YEG HNH SP 
Sbjct: 122 DGYKWRKYGKKPITGSPFPRHYHKCSSPDCNVKKKIERDTNNPDYILTTYEGRHNHPSPS 172

BLAST of Sed0026200 vs. ExPASy TrEMBL
Match: A0A0A0LM41 (WRKY domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G297180 PE=4 SV=1)

HSP 1 Score: 294.7 bits (753), Expect = 3.0e-76
Identity = 160/202 (79.21%), Postives = 172/202 (85.15%), Query Frame = 0

Query: 1   MASFPHEDPNPNSNPNP-YYTHFPPILDHTSFFDFEISDFLVFGDDENSVDQQAASSSPS 60
           MASFP+ED N N NPNP  YTHFPPILD  SFFDFE+SDFL+FGDD N V  Q ASSSPS
Sbjct: 1   MASFPYEDSNLNPNPNPNNYTHFPPILDPASFFDFELSDFLLFGDDNNIVVDQVASSSPS 60

Query: 61  ILSSEKIT--GVDSGGSGTAADSGSSVVVSSGRPTSIRSSKSGEKKRKGEIGRRVAFRTK 120
           + SSEKIT  GVDSGGS T  D+GSSVVVSS    S   SK+GEKKRKGE+G RVAFRTK
Sbjct: 61  MTSSEKITSGGVDSGGSSTVIDTGSSVVVSS----SGARSKNGEKKRKGEMGCRVAFRTK 120

Query: 121 SEVEIMDDGYKWRKYGKKSVKNSPNPRNYYKCSSEGCSVKKKVERDREDASYVITSYEGV 180
           SE EIMDDGYKWRKYGKKSVKNSPNPRNYYKCSSEGC+VKKKVERDREDA+YVIT+YEG+
Sbjct: 121 SEQEIMDDGYKWRKYGKKSVKNSPNPRNYYKCSSEGCNVKKKVERDREDANYVITTYEGI 180

Query: 181 HNHESPFVVYYNQMPSFNSTPT 200
           HNHESPFVVYYNQ+PSF S  T
Sbjct: 181 HNHESPFVVYYNQLPSFTSAST 198

BLAST of Sed0026200 vs. ExPASy TrEMBL
Match: A0A1S3C6R2 (probable WRKY transcription factor 51 OS=Cucumis melo OX=3656 GN=LOC103497478 PE=4 SV=1)

HSP 1 Score: 289.7 bits (740), Expect = 9.6e-75
Identity = 159/212 (75.00%), Postives = 176/212 (83.02%), Query Frame = 0

Query: 1   MASFPHEDPNP-----NSNPNPYYTHFPPILDHTSFFDFEISDFLVFGD----DENSVDQ 60
           MASFP+ED NP     N NPN YYT FPPILD  SFFDFE+SDFL+F D    + N++  
Sbjct: 1   MASFPYEDSNPNPNNLNPNPNHYYTPFPPILDPASFFDFELSDFLLFDDNNNNNNNNIVD 60

Query: 61  QAASSSPSILSSEKIT---GVDSGGSGTAADSGSSVVVSSGRPTSIRSSKSGEKKRKGEI 120
           QAASSSPS+ SSEKIT   GVDS GS T  D+GSS+VVSSG  T+   SK+GEKKRKGE+
Sbjct: 61  QAASSSPSMTSSEKITGGGGVDSSGSSTVIDTGSSIVVSSGASTTSIRSKNGEKKRKGEM 120

Query: 121 GRRVAFRTKSEVEIMDDGYKWRKYGKKSVKNSPNPRNYYKCSSEGCSVKKKVERDREDAS 180
           G RVAFRTKSE EIMDDGYKWRKYGKKSVKNSPNPRNYYKCSSEGC+VKKKVERDREDA+
Sbjct: 121 GCRVAFRTKSEQEIMDDGYKWRKYGKKSVKNSPNPRNYYKCSSEGCNVKKKVERDREDAN 180

Query: 181 YVITSYEGVHNHESPFVVYYNQMPSF-NSTPT 200
           YVIT+YEG+HNHESPFVVYYNQ+PSF  STPT
Sbjct: 181 YVITTYEGIHNHESPFVVYYNQLPSFTTSTPT 212

BLAST of Sed0026200 vs. ExPASy TrEMBL
Match: A0A6J1DV80 (probable WRKY transcription factor 51 OS=Momordica charantia OX=3673 GN=LOC111024371 PE=4 SV=1)

HSP 1 Score: 282.0 bits (720), Expect = 2.0e-72
Identity = 147/194 (75.77%), Postives = 163/194 (84.02%), Query Frame = 0

Query: 1   MASFPHEDPNPNSNPNPYYTHFPPILDHTSFFDFEISDFLVFGDDENSVDQQAASSSPSI 60
           MASFP +DPNP  NPNP YTHFPPILD + FFDF++SD+L+  DD  ++D QAASSSPSI
Sbjct: 1   MASFPQQDPNP--NPNPNYTHFPPILDPSVFFDFDLSDYLMLNDDNINIDDQAASSSPSI 60

Query: 61  LSSEKITGVDSGGSGTAADSGSSVVVSSGRPTSIRSSKSGEKKRKGEIGRRVAFRTKSEV 120
            SSEKITGVDSG S    DSGSS V SSG  +S+       KK+K ++G RVAFRTKSE 
Sbjct: 61  ASSEKITGVDSGNSCAVVDSGSSTVASSGATSSMNEG----KKKKEDVGCRVAFRTKSEQ 120

Query: 121 EIMDDGYKWRKYGKKSVKNSPNPRNYYKCSSEGCSVKKKVERDREDASYVITSYEGVHNH 180
           EIMDDGYKWRKYGKKSVKNSPNPRNYYKCSSEGC+VKKKVERDREDASYVIT+YEG+HNH
Sbjct: 121 EIMDDGYKWRKYGKKSVKNSPNPRNYYKCSSEGCTVKKKVERDREDASYVITTYEGIHNH 180

Query: 181 ESPFVVYYNQMPSF 195
           ESPFVVYYNQMPSF
Sbjct: 181 ESPFVVYYNQMPSF 188

BLAST of Sed0026200 vs. ExPASy TrEMBL
Match: A0A6J1EIN3 (probable WRKY transcription factor 51 OS=Cucurbita moschata OX=3662 GN=LOC111434887 PE=4 SV=1)

HSP 1 Score: 278.9 bits (712), Expect = 1.7e-71
Identity = 154/199 (77.39%), Postives = 169/199 (84.92%), Query Frame = 0

Query: 1   MASFPHEDPNPNSNPNPYYTHFPPILDHTSFFDFEISDFLVFGDDENSVDQQAASSSPSI 60
           MASFP+EDPNP  NPNP +T F PILD  SFFDF++S+FLV GDD++ VDQ A+S     
Sbjct: 1   MASFPYEDPNP--NPNPNFTQFSPILDPASFFDFDLSNFLV-GDDDSYVDQLASS----- 60

Query: 61  LSSEKITGVDSGGSGTAADSGSSVVVSSGRPTSIRSSKSGEKKRKGEIGRRVAFRTKSEV 120
            SSEKITGVDSGGS  A DSGSS VVSS    SIR SK+GE+KRKGE+G RVAFRTKSE 
Sbjct: 61  -SSEKITGVDSGGSSVAVDSGSSFVVSSEPSPSIR-SKNGERKRKGEMGCRVAFRTKSEQ 120

Query: 121 EIMDDGYKWRKYGKKSVKNSPNPRNYYKCSSEGCSVKKKVERDREDASYVITSYEGVHNH 180
           EIMDDGYKWRKYGKKSVKNSPNPRNYYKCSSEGC+VKKKVERDREDASYVIT+YEG+HNH
Sbjct: 121 EIMDDGYKWRKYGKKSVKNSPNPRNYYKCSSEGCNVKKKVERDREDASYVITTYEGIHNH 180

Query: 181 ESPFVVYYNQMPSFNSTPT 200
           ESPFVVYYNQ+PS  ST T
Sbjct: 181 ESPFVVYYNQIPSLTSTST 189

BLAST of Sed0026200 vs. ExPASy TrEMBL
Match: A0A6J1I2S4 (probable WRKY transcription factor 51 OS=Cucurbita maxima OX=3661 GN=LOC111470401 PE=4 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 3.9e-68
Identity = 147/199 (73.87%), Postives = 164/199 (82.41%), Query Frame = 0

Query: 1   MASFPHEDPNPNSNPNPYYTHFPPILDHTSFFDFEISDFLVFGDDENSVDQQAASSSPSI 60
           MASFP+EDPNP  NPNP +T F PILD  SFFDF++S+FLV GDD++ VDQ A+S     
Sbjct: 1   MASFPYEDPNP--NPNPNFTQFSPILDPASFFDFDLSNFLV-GDDDSYVDQLASS----- 60

Query: 61  LSSEKITGVDSGGSGTAADSGSSVVVSSGRPTSIRSSKSGEKKRKGEIGRRVAFRTKSEV 120
            SSEKI GVDSGGS  A DSGSS VVSS    SIR SK GE+K KGE+G R+AFRTKSE 
Sbjct: 61  -SSEKIIGVDSGGSSVAVDSGSSFVVSSEPSPSIR-SKKGERKMKGEMGCRIAFRTKSEQ 120

Query: 121 EIMDDGYKWRKYGKKSVKNSPNPRNYYKCSSEGCSVKKKVERDREDASYVITSYEGVHNH 180
           EI+DDGYKWRKYGKKSVKNSPNPRNYYKCSSEGC+VKKKVERDRED SYVIT+YEG+HNH
Sbjct: 121 EIIDDGYKWRKYGKKSVKNSPNPRNYYKCSSEGCNVKKKVERDREDTSYVITTYEGIHNH 180

Query: 181 ESPFVVYYNQMPSFNSTPT 200
           ESPF +YYNQ+PS  ST T
Sbjct: 181 ESPFALYYNQIPSLTSTST 189

BLAST of Sed0026200 vs. TAIR 10
Match: AT5G64810.1 (WRKY DNA-binding protein 51 )

HSP 1 Score: 160.2 bits (404), Expect = 1.7e-39
Identity = 98/191 (51.31%), Postives = 130/191 (68.06%), Query Frame = 0

Query: 10  NPNSNPNPYYTHFP------PILDHTSFFDFEISDFLVFGDDE---NSVDQQAASSSPSI 69
           N + NP+P +T+F       P +D+  F     S+ + F  DE   N + ++  SS  SI
Sbjct: 2   NISQNPSPNFTYFSDENFINPFMDNNDF-----SNLMFFDIDEGGNNGLIEEEISSPTSI 61

Query: 70  LSSEKITGVDSGGSGTAADSGSSVVVSSGRPTSIRSSKSGEKKRKGEIGRRVAFRTKSEV 129
           +SSE  TG +SGGSG+A          S + ++ R SK  ++ +  E G RVAFRT+S++
Sbjct: 62  VSSETFTG-ESGGSGSA-------TTLSKKESTNRGSKESDQTK--ETGHRVAFRTRSKI 121

Query: 130 EIMDDGYKWRKYGKKSVKNSPNPRNYYKCSSEGCSVKKKVERDREDASYVITSYEGVHNH 189
           ++MDDG+KWRKYGKKSVKN+ N RNYYKCSSEGCSVKK+VERD +DA+YVIT+YEGVHNH
Sbjct: 122 DVMDDGFKWRKYGKKSVKNNINKRNYYKCSSEGCSVKKRVERDGDDAAYVITTYEGVHNH 177

Query: 190 ESPFVVYYNQM 192
           ES   VYYN+M
Sbjct: 182 ESLSNVYYNEM 177

BLAST of Sed0026200 vs. TAIR 10
Match: AT5G26170.1 (WRKY DNA-binding protein 50 )

HSP 1 Score: 120.6 bits (301), Expect = 1.5e-27
Identity = 75/159 (47.17%), Postives = 101/159 (63.52%), Query Frame = 0

Query: 27  DHTSFFDF---EISDFLVFGDDENSVDQQAASSSPSILSSEKITGVDSGGSGTAADSGSS 86
           D  S F+F   ++SD   + DD+        + S    +S+    + SG S   +   S 
Sbjct: 15  DTHSVFEFPELDLSD--EWMDDDLVSAVSGMNQSYGYQTSDVAGALFSGSSSCFSHPESP 74

Query: 87  VVVSSGRPTSIRSSKSGEKKRKGEIGRRVAFRTKSEVEIMDDGYKWRKYGKKSVKNSPNP 146
              +    T+  S+ +  KK K +I  RVAF+T+SEVE++DDG+KWRKYGKK VKNSP+P
Sbjct: 75  STKTYVAATATASADNQNKKEKKKIKGRVAFKTRSEVEVLDDGFKWRKYGKKMVKNSPHP 134

Query: 147 RNYYKCSSEGCSVKKKVERDREDASYVITSYEGVHNHES 183
           RNYYKCS +GC VKK+VERDR+D S+VIT+YEG HNH S
Sbjct: 135 RNYYKCSVDGCPVKKRVERDRDDPSFVITTYEGSHNHSS 171

BLAST of Sed0026200 vs. TAIR 10
Match: AT3G01970.1 (WRKY DNA-binding protein 45 )

HSP 1 Score: 109.8 bits (273), Expect = 2.6e-24
Identity = 52/96 (54.17%), Postives = 72/96 (75.00%), Query Frame = 0

Query: 85  VVSSGRPTSIRSSKSGEKKRKGEIGRRVAFRTKSEVEIMDDGYKWRKYGKKSVKNSPNPR 144
           V +S +PT+    K   KK+K E   R AF+T+S+V+I+DDGY+WRKYG+K+VKN+P PR
Sbjct: 26  VDNSAQPTTSSEEKPRSKKKKKEREARYAFQTRSQVDILDDGYRWRKYGQKAVKNNPFPR 85

Query: 145 NYYKCSSEGCSVKKKVERDREDASYVITSYEGVHNH 181
           +YYKC+ EGC VKK+V+R   D   V+T+Y+GVH H
Sbjct: 86  SYYKCTEEGCRVKKQVQRQWGDEGVVVTTYQGVHTH 121

BLAST of Sed0026200 vs. TAIR 10
Match: AT1G29860.1 (WRKY DNA-binding protein 71 )

HSP 1 Score: 107.1 bits (266), Expect = 1.7e-23
Identity = 54/99 (54.55%), Postives = 75/99 (75.76%), Query Frame = 0

Query: 85  VVSSGRPTSIRSSKSGEKKRKGEIGRRVAFRTKSEVEIMDDGYKWRKYGKKSVKNSPNPR 144
           V  S +  + +  K GEKK + E+  RVAF TKSE++ ++DGY+WRKYG+K+VKNSP PR
Sbjct: 100 VGESSKQLTKQGKKKGEKKER-EV--RVAFMTKSEIDHLEDGYRWRKYGQKAVKNSPYPR 159

Query: 145 NYYKCSSEGCSVKKKVERDREDASYVITSYEGVHNHESP 184
           +YY+C+++ C+VKK+VER  +D S VIT+YEG HNH  P
Sbjct: 160 SYYRCTTQKCNVKKRVERSFQDPSIVITTYEGKHNHPIP 195

BLAST of Sed0026200 vs. TAIR 10
Match: AT2G21900.1 (WRKY DNA-binding protein 59 )

HSP 1 Score: 101.3 bits (251), Expect = 9.3e-22
Identity = 74/183 (40.44%), Postives = 101/183 (55.19%), Query Frame = 0

Query: 10  NPNSNPNPYYTHFPPILDHTSFFDFEISDFLVFGDDENSVDQQAASSSPSI--LSSEKIT 69
           N  SNPNP  T      D T FF F+  D   F      + ++  SSSP++   SSEK+ 
Sbjct: 2   NYPSNPNPSST------DFTEFFKFDDFDD-TFEKIMEEIGREDHSSSPTLSWSSSEKLV 61

Query: 70  GVDSGGSGTAADSGSSVVVSSGRPTSIRSSKSGEKKRKGEIGRRVAFRTKSEVE---IMD 129
             +       + + S +    G    I+     ++KR  E      F+TKS ++    +D
Sbjct: 62  AAEITSPLQTSLATSPMSFEIGDKDEIK-----KRKRHKEDPIIHVFKTKSSIDEKVALD 121

Query: 130 DGYKWRKYGKKSVKNSPNPRNYYKCSSEGCSVKKKVERDREDASYVITSYEGVHNHESPF 188
           DGYKWRKYGKK +  SP PR+Y+KCSS  C+VKKK+ERD  +  Y++T+YEG HNH SP 
Sbjct: 122 DGYKWRKYGKKPITGSPFPRHYHKCSSPDCNVKKKIERDTNNPDYILTTYEGRHNHPSPS 172

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038901292.12.4e-8081.46probable WRKY transcription factor 51 isoform X1 [Benincasa hispida][more]
XP_004148451.19.5e-7779.31probable WRKY transcription factor 51 [Cucumis sativus] >KAE8651959.1 hypothetic... [more]
XP_008457906.12.0e-7475.00PREDICTED: probable WRKY transcription factor 51 [Cucumis melo][more]
XP_022157717.14.1e-7275.77probable WRKY transcription factor 51 [Momordica charantia][more]
XP_022927982.13.5e-7177.39probable WRKY transcription factor 51 [Cucurbita moschata][more]
Match NameE-valueIdentityDescription
Q93WU92.4e-3851.31Probable WRKY transcription factor 51 OS=Arabidopsis thaliana OX=3702 GN=WRKY51 ... [more]
Q8VWQ52.1e-2647.17Probable WRKY transcription factor 50 OS=Arabidopsis thaliana OX=3702 GN=WRKY50 ... [more]
Q9S7633.7e-2354.17Probable WRKY transcription factor 45 OS=Arabidopsis thaliana OX=3702 GN=WRKY45 ... [more]
Q93WV42.4e-2254.55WRKY transcription factor 71 OS=Arabidopsis thaliana OX=3702 GN=WRKY71 PE=2 SV=1[more]
Q9SJ091.3e-2040.44Probable WRKY transcription factor 59 OS=Arabidopsis thaliana OX=3702 GN=WRKY59 ... [more]
Match NameE-valueIdentityDescription
A0A0A0LM413.0e-7679.21WRKY domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G297180 PE=4 S... [more]
A0A1S3C6R29.6e-7575.00probable WRKY transcription factor 51 OS=Cucumis melo OX=3656 GN=LOC103497478 PE... [more]
A0A6J1DV802.0e-7275.77probable WRKY transcription factor 51 OS=Momordica charantia OX=3673 GN=LOC11102... [more]
A0A6J1EIN31.7e-7177.39probable WRKY transcription factor 51 OS=Cucurbita moschata OX=3662 GN=LOC111434... [more]
A0A6J1I2S43.9e-6873.87probable WRKY transcription factor 51 OS=Cucurbita maxima OX=3661 GN=LOC11147040... [more]
Match NameE-valueIdentityDescription
AT5G64810.11.7e-3951.31WRKY DNA-binding protein 51 [more]
AT5G26170.11.5e-2747.17WRKY DNA-binding protein 50 [more]
AT3G01970.12.6e-2454.17WRKY DNA-binding protein 45 [more]
AT1G29860.11.7e-2354.55WRKY DNA-binding protein 71 [more]
AT2G21900.19.3e-2240.44WRKY DNA-binding protein 59 [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003657WRKY domainSMARTSM00774WRKY_clscoord: 123..182
e-value: 1.2E-33
score: 127.7
IPR003657WRKY domainPFAMPF03106WRKYcoord: 124..181
e-value: 3.9E-23
score: 81.5
IPR003657WRKY domainPROSITEPS50811WRKYcoord: 118..183
score: 31.456171
IPR036576WRKY domain superfamilyGENE3D2.20.25.80WRKY domaincoord: 108..184
e-value: 5.2E-32
score: 111.5
IPR036576WRKY domain superfamilySUPERFAMILY118290WRKY DNA-binding domaincoord: 115..183
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..20
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 48..95
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 96..110
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 48..110
NoneNo IPR availablePANTHERPTHR31221:SF219WRKY TRANSCRIPTION FACTOR 50-RELATEDcoord: 6..189
IPR044810WRKY transcription factor, plantPANTHERPTHR31221WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATEDcoord: 6..189

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0026200.1Sed0026200.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005634 nucleus
molecular_function GO:0003700 DNA-binding transcription factor activity
molecular_function GO:0043565 sequence-specific DNA binding