Sed0026144 (gene) Chayote v1

Overview


Name	Sed0026144
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Ethylene-responsive transcription factor
Location	LG10: 36862716 .. 36863748 (+)
RNA-Seq Expression	Sed0026144
Synteny	Sed0026144

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTCAATTCTCACTTTAAAAAAAAAAACCAAAACAAATTAAATTAAAATCGAAAATCTCAAACTCAAATGGTCATGGCCTCCGACCCCCCTCAGCCGCCTTTCCGCCGCATCACGGAGGAGCAAGAAGTCTCCGTCATCGTCGCCGCCCTCACCCACGTCATCTCCGGCGACCTCCAATTCCCCTCCGCCGCCGTCGATTCCCTTCTCCCACCCTCTTCCGATTTTGACACGTGTCTCGTCTGCAGAATCCACGGCTGCTTGGGCTGCAATTTCTTCCCCGCCACCACCCACGGCGGCGACGGCGGCAGCAACTCCGGCCGCCGTGTCAGGCGAGTGAAGAAGAATTACAGAGGAGTCCGGCAGCGGCCGTGGGGCAAATGGGCCGCCGAAATCCGCGACCCGAAACGGGCCGCACGTGTCTGGCTTGGCACGTTCAACACCGCCGTGGAAGCCGCACGTGCCTACGACGCCGCCGCCACTAAATTCCGCGGCCCACGTGCCAAGCTCAACTTCCCTTCCACGGACAATTCTTTGTCGTCAATGCCATTAATTAATAATTACTCTTCCTCCACCTCCGCCACCGCCCCACCCGCCACCGCCGCCGTCCCCACCGCCGTCTCCGCCGCCGCCACTTCTCATTTCTACCCAAATGAAGCAGAGCCGTCGTCAATTCAAAACAGCGCCGCCGCCGTATTGTCGGATAATTTCGACGACGACATTGAGAGATTGTTATTGGATTTCACCGATCAATCCCGGAGATGACAAAGTCAAAATTGAAAATAAAAAAACAAAAAAGCTCTGGAGAAAAAAGCAGAGGAAGAATTTATTTAGTTTTTTAGTCAAATTTTATCTGCTTAAAAATTGTACAATTGTCTATTTTTTGATTGTACACTTTTCAAACTCCACGAGCTGTTGAGAATAATTGTTTTTTATTATAAGTACTGGATATCCGAAATCCTGTAATCACTTTCTGCCACGTGTACTGGAGTTTAGCACGTGCTTAATTGAATGGGACTAGTTATTTCTTTTAAA

mRNA sequence

TTTCAATTCTCACTTTAAAAAAAAAAACCAAAACAAATTAAATTAAAATCGAAAATCTCAAACTCAAATGGTCATGGCCTCCGACCCCCCTCAGCCGCCTTTCCGCCGCATCACGGAGGAGCAAGAAGTCTCCGTCATCGTCGCCGCCCTCACCCACGTCATCTCCGGCGACCTCCAATTCCCCTCCGCCGCCGTCGATTCCCTTCTCCCACCCTCTTCCGATTTTGACACGTGTCTCGTCTGCAGAATCCACGGCTGCTTGGGCTGCAATTTCTTCCCCGCCACCACCCACGGCGGCGACGGCGGCAGCAACTCCGGCCGCCGTGTCAGGCGAGTGAAGAAGAATTACAGAGGAGTCCGGCAGCGGCCGTGGGGCAAATGGGCCGCCGAAATCCGCGACCCGAAACGGGCCGCACGTGTCTGGCTTGGCACGTTCAACACCGCCGTGGAAGCCGCACGTGCCTACGACGCCGCCGCCACTAAATTCCGCGGCCCACGTGCCAAGCTCAACTTCCCTTCCACGGACAATTCTTTGTCGTCAATGCCATTAATTAATAATTACTCTTCCTCCACCTCCGCCACCGCCCCACCCGCCACCGCCGCCGTCCCCACCGCCGTCTCCGCCGCCGCCACTTCTCATTTCTACCCAAATGAAGCAGAGCCGTCGTCAATTCAAAACAGCGCCGCCGCCGTATTGTCGGATAATTTCGACGACGACATTGAGAGATTGTTATTGGATTTCACCGATCAATCCCGGAGATGACAAAGTCAAAATTGAAAATAAAAAAACAAAAAAGCTCTGGAGAAAAAAGCAGAGGAAGAATTTATTTAGTTTTTTAGTCAAATTTTATCTGCTTAAAAATTGTACAATTGTCTATTTTTTGATTGTACACTTTTCAAACTCCACGAGCTGTTGAGAATAATTGTTTTTTATTATAAGTACTGGATATCCGAAATCCTGTAATCACTTTCTGCCACGTGTACTGGAGTTTAGCACGTGCTTAATTGAATGGGACTAGTTATTTCTTTTAAA

Coding sequence (CDS)

ATGGTCATGGCCTCCGACCCCCCTCAGCCGCCTTTCCGCCGCATCACGGAGGAGCAAGAAGTCTCCGTCATCGTCGCCGCCCTCACCCACGTCATCTCCGGCGACCTCCAATTCCCCTCCGCCGCCGTCGATTCCCTTCTCCCACCCTCTTCCGATTTTGACACGTGTCTCGTCTGCAGAATCCACGGCTGCTTGGGCTGCAATTTCTTCCCCGCCACCACCCACGGCGGCGACGGCGGCAGCAACTCCGGCCGCCGTGTCAGGCGAGTGAAGAAGAATTACAGAGGAGTCCGGCAGCGGCCGTGGGGCAAATGGGCCGCCGAAATCCGCGACCCGAAACGGGCCGCACGTGTCTGGCTTGGCACGTTCAACACCGCCGTGGAAGCCGCACGTGCCTACGACGCCGCCGCCACTAAATTCCGCGGCCCACGTGCCAAGCTCAACTTCCCTTCCACGGACAATTCTTTGTCGTCAATGCCATTAATTAATAATTACTCTTCCTCCACCTCCGCCACCGCCCCACCCGCCACCGCCGCCGTCCCCACCGCCGTCTCCGCCGCCGCCACTTCTCATTTCTACCCAAATGAAGCAGAGCCGTCGTCAATTCAAAACAGCGCCGCCGCCGTATTGTCGGATAATTTCGACGACGACATTGAGAGATTGTTATTGGATTTCACCGATCAATCCCGGAGATGA

Protein sequence

MVMASDPPQPPFRRITEEQEVSVIVAALTHVISGDLQFPSAAVDSLLPPSSDFDTCLVCRIHGCLGCNFFPATTHGGDGGSNSGRRVRRVKKNYRGVRQRPWGKWAAEIRDPKRAARVWLGTFNTAVEAARAYDAAATKFRGPRAKLNFPSTDNSLSSMPLINNYSSSTSATAPPATAAVPTAVSAAATSHFYPNEAEPSSIQNSAAAVLSDNFDDDIERLLLDFTDQSRR

Homology

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BLAST of Sed0026144 vs. NCBI nr
Match: KAG6588657.1 (Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 244.2 bits (622), Expect = 1.1e-60
Identity = 150/261 (57.47%), Postives = 174/261 (66.67%), Query Frame = 0


Query: 1   MVMASDPPQPPFRRITEEQEVSVIVAALTHVISG----DLQF-----------PSA-AVD 60
           M+MAS      F R+T+EQE  VIV ALT V+SG     L+F           PS     
Sbjct: 1   MLMASHHHSAAFPRLTDEQEGLVIVDALTQVVSGAAAAGLEFRHDHFLRLLHPPSTNTTT 60

Query: 61  SLLPPSSDFDTCLVCRIHGCLGCNFF-------PATTHGGDGGSNSGRRVRRVKKNYRGV 120
           ++ PPSSDFDTC +CRI GCLGCNFF       P TT   D  +NSGRRVRR+KKNYRGV
Sbjct: 61  TIFPPSSDFDTCHICRISGCLGCNFFSTPSSHQPTTTTTTDKNNNSGRRVRRLKKNYRGV 120

Query: 121 RQRPWGKWAAEIRDPKRAARVWLGTFNTAVEAARAYDAAATKFRGPRAKLNFPSTDNSLS 180
           RQRPWGKWAAEIRDPKRAARVWLGTFNTA EAARAYD AA KFRGPRA+LNFPS+DNSL 
Sbjct: 121 RQRPWGKWAAEIRDPKRAARVWLGTFNTAEEAARAYDEAAIKFRGPRARLNFPSSDNSLM 180

Query: 181 SMPLINNYSSSTSATAPPATAAVPTAVSAAATSHFYPNEA-----EPSS---IQNSAAAV 231
           +       +S+T++T+   TAA  TA +AAATS+F PNEA      PSS   IQN+    
Sbjct: 181 TFNYSPPAASTTTSTSATVTAAPATAAAAAATSNFNPNEAAVAPRTPSSMMEIQNNVVLA 240

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BLAST of Sed0026144 vs. NCBI nr
Match: XP_022927864.1 (ethylene-responsive transcription factor 11-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 241.5 bits (615), Expect = 7.2e-60
Identity = 149/260 (57.31%), Postives = 173/260 (66.54%), Query Frame = 0


Query: 1   MVMASDPPQPPFRRITEEQEVSVIVAALTHVISG----DLQF-----------PSA-AVD 60
           M+MAS      F R+T+EQE  VIV ALT V+SG     L+F           PS     
Sbjct: 1   MLMASHHHSAAFPRLTDEQEGLVIVDALTQVVSGAAAAGLEFRHDHFLRLLHPPSTNTTT 60

Query: 61  SLLPPSSDFDTCLVCRIHGCLGCNFFPA------TTHGGDGGSNSGRRVRRVKKNYRGVR 120
           ++ PPSSDFDTC +CRI GCLGCNFF        TT   D  +NSGRRVRR+KKNYRGVR
Sbjct: 61  TIFPPSSDFDTCHICRISGCLGCNFFSTPSSHQPTTTTTDKNNNSGRRVRRLKKNYRGVR 120

Query: 121 QRPWGKWAAEIRDPKRAARVWLGTFNTAVEAARAYDAAATKFRGPRAKLNFPSTDNSLSS 180
           QRPWGKWAAEIRDPKRAARVWLGTFNTA EAARAYD AA KFRGPRA+LNFPS+DNSL +
Sbjct: 121 QRPWGKWAAEIRDPKRAARVWLGTFNTAEEAARAYDEAAIKFRGPRARLNFPSSDNSLMT 180

Query: 181 MPLINNYSSSTSATAPPATAAVPTAVSAAATSHFYPNEA-----EPSS---IQNSAAAVL 231
                  +S+T++T+   TAA  TA +AAATS+F PNEA      PSS   IQN+     
Sbjct: 181 FNYSPPAASTTTSTSATVTAAPATATAAAATSNFNPNEAAVAPRTPSSMMEIQNNVVLAE 240

[Close]

BLAST of Sed0026144 vs. NCBI nr
Match: KAG7025116.1 (Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 239.2 bits (609), Expect = 3.6e-59
Identity = 148/258 (57.36%), Postives = 171/258 (66.28%), Query Frame = 0


Query: 3   MASDPPQPPFRRITEEQEVSVIVAALTHVISG----DLQF-----------PSA-AVDSL 62
           MAS      F R+T+EQE  VIV ALT V+SG     L+F           PS     ++
Sbjct: 1   MASHHHSAAFPRLTDEQEGLVIVDALTQVVSGAAAAGLEFRHDHFLRLLHPPSTNTTTTI 60

Query: 63  LPPSSDFDTCLVCRIHGCLGCNFFPA------TTHGGDGGSNSGRRVRRVKKNYRGVRQR 122
            PPSSDFDTC +CRI GCLGCNFF        TT   D  +NSGRRVRR+KKNYRGVRQR
Sbjct: 61  FPPSSDFDTCHICRISGCLGCNFFSTPSSHQPTTTTTDKNNNSGRRVRRLKKNYRGVRQR 120

Query: 123 PWGKWAAEIRDPKRAARVWLGTFNTAVEAARAYDAAATKFRGPRAKLNFPSTDNSLSSMP 182
           PWGKWAAEIRDPKRAARVWLGTFNTA EAARAYD AA KFRGPRA+LNFPS+DNSL +  
Sbjct: 121 PWGKWAAEIRDPKRAARVWLGTFNTAEEAARAYDEAAIKFRGPRARLNFPSSDNSLMTFN 180

Query: 183 LINNYSSSTSATAPPATAAVPTAVSAAATSHFYPNEA-----EPSS---IQNSAAAVLSD 231
                +S+T++T+   TAA  TA +AAATS+F PNEA      PSS   IQN+       
Sbjct: 181 YSPPAASTTTSTSATVTAAPATATAAAATSNFNPNEAAVAPRTPSSMMEIQNNVVLAEIF 240

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BLAST of Sed0026144 vs. NCBI nr
Match: XP_023530126.1 (ethylene-responsive transcription factor 11-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 235.7 bits (600), Expect = 3.9e-58
Identity = 145/255 (56.86%), Postives = 170/255 (66.67%), Query Frame = 0


Query: 1   MVMASDPPQPPFRRITEEQEVSVIVAALTHVISG----DLQFPS-------AAVDSLLPP 60
           M+MAS      F R+T+EQE  VIV ALT V+SG     L+F             ++ PP
Sbjct: 1   MLMASHHHSAAFPRLTDEQEGLVIVDALTQVVSGAAAAGLEFRHDHFLRLLHPPSTIFPP 60

Query: 61  SSDFDTCLVCRIHGCLGCNFFPA------TTHGGDGGSNSGRRVRRVKKNYRGVRQRPWG 120
           SSDFDTC +CRI GCLGCNFF        TT   D  +NSGRRVRR+KKNYRGVRQRPWG
Sbjct: 61  SSDFDTCHICRISGCLGCNFFSTPSSHQPTTTTTDKNNNSGRRVRRLKKNYRGVRQRPWG 120

Query: 121 KWAAEIRDPKRAARVWLGTFNTAVEAARAYDAAATKFRGPRAKLNFPSTDNSLSSMPLIN 180
           KWAAEIRDPKRAARVWLGTFNTA EAARAYD AA KFRGPRA+LNFPS+DNSL++     
Sbjct: 121 KWAAEIRDPKRAARVWLGTFNTAEEAARAYDEAAIKFRGPRARLNFPSSDNSLTTFNYSP 180

Query: 181 NYSSSTSATAPPATAAVPTAVSAAATSHFYPNEA-----EPSS---IQNSAAAVLSDNFD 231
             +S+T++T+   TAA  TA +AAATS+   NEA      PSS   IQN+         D
Sbjct: 181 PAASTTTSTSATVTAAPATATAAAATSNLNRNEAAVAPRTPSSMMEIQNNVVLAEIFEDD 240

[Close]

BLAST of Sed0026144 vs. NCBI nr
Match: XP_022927865.1 (ethylene-responsive transcription factor 11-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 231.1 bits (588), Expect = 9.7e-57
Identity = 145/260 (55.77%), Postives = 166/260 (63.85%), Query Frame = 0


Query: 1   MVMASDPPQPPFRRITEEQEVSVIVAALTHVISG----DLQF-----------PSA-AVD 60
           M+MAS      F R+T+EQE  VIV ALT V+SG     L+F           PS     
Sbjct: 1   MLMASHHHSAAFPRLTDEQEGLVIVDALTQVVSGAAAAGLEFRHDHFLRLLHPPSTNTTT 60

Query: 61  SLLPPSSDFDTCLVCRIHGCLGCNFFPA------TTHGGDGGSNSGRRVRRVKKNYRGVR 120
           ++ PPSSDFDTC +CRI GCLGCNFF        TT   D  +NSGRRVRR+KKNYRGVR
Sbjct: 61  TIFPPSSDFDTCHICRISGCLGCNFFSTPSSHQPTTTTTDKNNNSGRRVRRLKKNYRGVR 120

Query: 121 QRPWGKWAAEIRDPKRAARVWLGTFNTAVEAARAYDAAATKFRGPRAKLNFPSTDNSLSS 180
           QRPWGKWAAEIRDPKRAARVWLGTFNTA EAARAYD AA KFRGPRA+LNFPS+DNSL +
Sbjct: 121 QRPWGKWAAEIRDPKRAARVWLGTFNTAEEAARAYDEAAIKFRGPRARLNFPSSDNSLMT 180

Query: 181 MPLINNYSSSTSATAPPATAAVPTAVSAAATSHFYPNEA-----EPSS---IQNSAAAVL 231
                NYS       P A+    T+ +  ATS+F PNEA      PSS   IQN+     
Sbjct: 181 F----NYS------PPAASTTTSTSATVTATSNFNPNEAAVAPRTPSSMMEIQNNVVLAE 240

[Close]

BLAST of Sed0026144 vs. ExPASy Swiss-Prot
Match: Q9SZ06 (Ethylene-responsive transcription factor ERF109 OS=Arabidopsis thaliana OX=3702 GN=ERF109 PE=1 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 1.4e-34
Identity = 102/207 (49.28%), Postives = 122/207 (58.94%), Query Frame = 0


Query: 2   VMASDPPQPPFRRITEEQEVSVIVAALTHVISGDLQ------FPS-AAVDSLLPPSSDFD 61
           V A  P +    +++ EQE+SVIV+AL HVISG+ +      F S + V S   P  D D
Sbjct: 11  VGAPAPTRYQKEQLSPEQELSVIVSALQHVISGENETAPCQGFSSDSTVISAGMPRLDSD 70

Query: 62  TCLVCRIHGCLGCNFFPATTHGGD----------GGSNSGR---------------RVRR 121
           TC VCRI GCLGCN+F A     +            SN  R               R R+
Sbjct: 71  TCQVCRIEGCLGCNYFFAPNQRIEKNHQQEEEITSSSNRRRESSPVAKKAEGGGKIRKRK 130

Query: 122 VKKN-YRGVRQRPWGKWAAEIRDPKRAARVWLGTFNTAVEAARAYDAAATKFRGPRAKLN 174
            KKN YRGVRQRPWGK+AAEIRDPKRA RVWLGTF TA +AARAYD AA  FRGPRAKLN
Sbjct: 131 NKKNGYRGVRQRPWGKFAAEIRDPKRATRVWLGTFETAEDAARAYDRAAIGFRGPRAKLN 190

[Close]

BLAST of Sed0026144 vs. ExPASy Swiss-Prot
Match: P93007 (Ethylene-responsive transcription factor ERF112 OS=Arabidopsis thaliana OX=3702 GN=ERF112 PE=1 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 4.0e-21
Identity = 48/60 (80.00%), Postives = 54/60 (90.00%), Query Frame = 0


Query: 91  KKNYRGVRQRPWGKWAAEIRDPKRAARVWLGTFNTAVEAARAYDAAATKFRGPRAKLNFP 150
           ++NYRGVRQRPWGKWAAEIRDP +AARVWLGTF+TA EAA AYD AA +FRG +AKLNFP
Sbjct: 67  QRNYRGVRQRPWGKWAAEIRDPNKAARVWLGTFDTAEEAALAYDKAAFEFRGHKAKLNFP 126

[Close]

BLAST of Sed0026144 vs. ExPASy Swiss-Prot
Match: Q7G1L2 (Ethylene-responsive transcription factor RAP2-6 OS=Arabidopsis thaliana OX=3702 GN=RAP2-6 PE=2 SV=2)

HSP 1 Score: 102.8 bits (255), Expect = 5.2e-21
Identity = 48/59 (81.36%), Postives = 51/59 (86.44%), Query Frame = 0


Query: 92  KNYRGVRQRPWGKWAAEIRDPKRAARVWLGTFNTAVEAARAYDAAATKFRGPRAKLNFP 151
           K YRGVRQRPWGKWAAEIRDP +A RVWLGTF TA  AARAYDAAA +FRG +AKLNFP
Sbjct: 59  KKYRGVRQRPWGKWAAEIRDPHKATRVWLGTFETAEAAARAYDAAALRFRGSKAKLNFP 117

[Close]

BLAST of Sed0026144 vs. ExPASy Swiss-Prot
Match: Q70II3 (Ethylene-responsive transcription factor ERF110 OS=Arabidopsis thaliana OX=3702 GN=ERF110 PE=2 SV=2)

HSP 1 Score: 102.4 bits (254), Expect = 6.8e-21
Identity = 54/84 (64.29%), Postives = 60/84 (71.43%), Query Frame = 0


Query: 88  RRVKKNYRGVRQRPWGKWAAEIRDPKRAARVWLGTFNTAVEAARAYDAAATKFRGPRAKL 147
           R  K+ YRGVRQRPWGKWAAEIRDP RAARVWLGTF+TA  AARAYD AA +FRG +AKL
Sbjct: 71  REKKRRYRGVRQRPWGKWAAEIRDPHRAARVWLGTFDTAEAAARAYDEAALRFRGNKAKL 130

Query: 148 NFPSTDNSLSSMPLINNYSSSTSA 172
           NFP     L   P +    + T A
Sbjct: 131 NFPEDVRILPPPPPLLRSPADTVA 154

[Close]

BLAST of Sed0026144 vs. ExPASy Swiss-Prot
Match: Q9FH54 (Ethylene-responsive transcription factor ERF114 OS=Arabidopsis thaliana OX=3702 GN=ERF114 PE=1 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 6.8e-21
Identity = 61/133 (45.86%), Postives = 80/133 (60.15%), Query Frame = 0


Query: 18  EQEVSVIVAALTHVISGDLQFPSAAVDSLLPPSSDFDTCLVCRIHGCLGCNFFPATTHGG 77
           + ++ V+V+ALT VI       S + D++     ++ +     ++     N   A TH  
Sbjct: 30  QHDMRVMVSALTQVIGNQ---QSKSHDNISSIDDNYPS-----VYNPQDPNQQVAPTHQD 89

Query: 78  DGGSNSGRRVRRVKKNYRGVRQRPWGKWAAEIRDPKRAARVWLGTFNTAVEAARAYDAAA 137
            G           +++YRGVRQRPWGKWAAEIRDPK+AARVWLGTF TA  AA AYD AA
Sbjct: 90  QGDLR--------RRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFETAESAALAYDEAA 146

Query: 138 TKFRGPRAKLNFP 151
            KF+G +AKLNFP
Sbjct: 150 LKFKGSKAKLNFP 146

[Close]

BLAST of Sed0026144 vs. ExPASy TrEMBL
Match: A0A6J1EJ70 (ethylene-responsive transcription factor 11-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111434632 PE=4 SV=1)

HSP 1 Score: 241.5 bits (615), Expect = 3.5e-60
Identity = 149/260 (57.31%), Postives = 173/260 (66.54%), Query Frame = 0


Query: 1   MVMASDPPQPPFRRITEEQEVSVIVAALTHVISG----DLQF-----------PSA-AVD 60
           M+MAS      F R+T+EQE  VIV ALT V+SG     L+F           PS     
Sbjct: 1   MLMASHHHSAAFPRLTDEQEGLVIVDALTQVVSGAAAAGLEFRHDHFLRLLHPPSTNTTT 60

Query: 61  SLLPPSSDFDTCLVCRIHGCLGCNFFPA------TTHGGDGGSNSGRRVRRVKKNYRGVR 120
           ++ PPSSDFDTC +CRI GCLGCNFF        TT   D  +NSGRRVRR+KKNYRGVR
Sbjct: 61  TIFPPSSDFDTCHICRISGCLGCNFFSTPSSHQPTTTTTDKNNNSGRRVRRLKKNYRGVR 120

Query: 121 QRPWGKWAAEIRDPKRAARVWLGTFNTAVEAARAYDAAATKFRGPRAKLNFPSTDNSLSS 180
           QRPWGKWAAEIRDPKRAARVWLGTFNTA EAARAYD AA KFRGPRA+LNFPS+DNSL +
Sbjct: 121 QRPWGKWAAEIRDPKRAARVWLGTFNTAEEAARAYDEAAIKFRGPRARLNFPSSDNSLMT 180

Query: 181 MPLINNYSSSTSATAPPATAAVPTAVSAAATSHFYPNEA-----EPSS---IQNSAAAVL 231
                  +S+T++T+   TAA  TA +AAATS+F PNEA      PSS   IQN+     
Sbjct: 181 FNYSPPAASTTTSTSATVTAAPATATAAAATSNFNPNEAAVAPRTPSSMMEIQNNVVLAE 240

[Close]

BLAST of Sed0026144 vs. ExPASy TrEMBL
Match: A0A6J1EQ36 (ethylene-responsive transcription factor 11-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111434632 PE=4 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 4.7e-57
Identity = 145/260 (55.77%), Postives = 166/260 (63.85%), Query Frame = 0


Query: 1   MVMASDPPQPPFRRITEEQEVSVIVAALTHVISG----DLQF-----------PSA-AVD 60
           M+MAS      F R+T+EQE  VIV ALT V+SG     L+F           PS     
Sbjct: 1   MLMASHHHSAAFPRLTDEQEGLVIVDALTQVVSGAAAAGLEFRHDHFLRLLHPPSTNTTT 60

Query: 61  SLLPPSSDFDTCLVCRIHGCLGCNFFPA------TTHGGDGGSNSGRRVRRVKKNYRGVR 120
           ++ PPSSDFDTC +CRI GCLGCNFF        TT   D  +NSGRRVRR+KKNYRGVR
Sbjct: 61  TIFPPSSDFDTCHICRISGCLGCNFFSTPSSHQPTTTTTDKNNNSGRRVRRLKKNYRGVR 120

Query: 121 QRPWGKWAAEIRDPKRAARVWLGTFNTAVEAARAYDAAATKFRGPRAKLNFPSTDNSLSS 180
           QRPWGKWAAEIRDPKRAARVWLGTFNTA EAARAYD AA KFRGPRA+LNFPS+DNSL +
Sbjct: 121 QRPWGKWAAEIRDPKRAARVWLGTFNTAEEAARAYDEAAIKFRGPRARLNFPSSDNSLMT 180

Query: 181 MPLINNYSSSTSATAPPATAAVPTAVSAAATSHFYPNEA-----EPSS---IQNSAAAVL 231
                NYS       P A+    T+ +  ATS+F PNEA      PSS   IQN+     
Sbjct: 181 F----NYS------PPAASTTTSTSATVTATSNFNPNEAAVAPRTPSSMMEIQNNVVLAE 240

[Close]

BLAST of Sed0026144 vs. ExPASy TrEMBL
Match: A0A2H4V3T2 (Ethylene-responsive transcription factor OS=Luffa aegyptiaca OX=3670 PE=2 SV=1)

HSP 1 Score: 230.7 bits (587), Expect = 6.1e-57
Identity = 144/258 (55.81%), Postives = 166/258 (64.34%), Query Frame = 0


Query: 1   MVMASDPPQPPFRRITEEQEVSVIVAALTHVISGD--------------LQFPSAAVDSL 60
           MV ASD    PFRRIT+EQE+SVIV ALT V+SG               L  PSA   ++
Sbjct: 1   MVTASDRLH-PFRRITDEQELSVIVDALTQVVSGPAADGLEFQHDRFLRLLLPSANDAAV 60

Query: 61  LPPSSDFDTCLVCRIHGCLGCNFFPATTHGGD----GGSNSGRRVRRVKKNYRGVRQRPW 120
            PPSSDFDTC VCRI GCLGCNFF A +          +NSGRRVRR KKNYRGVRQRPW
Sbjct: 61  FPPSSDFDTCHVCRISGCLGCNFFSAPSSHQQPTTANSNNSGRRVRRQKKNYRGVRQRPW 120

Query: 121 GKWAAEIRDPKRAARVWLGTFNTAVEAARAYDAAATKFRGPRAKLNFPSTDNSLSSMPLI 180
           GKWAAEIRDPKRAARVWLGTFNTA +AARAYDAAA KFRGPRA+LNFPSTD SL +    
Sbjct: 121 GKWAAEIRDPKRAARVWLGTFNTAEDAARAYDAAAIKFRGPRARLNFPSTDTSLMTF--- 180

Query: 181 NNYSSSTSATAPPATAAVPTAVSAAATSHFYPNEA----------EPSSIQNSAAAVLSD 231
            NYS   ++T   +T+    A + AATS  + NEA          +   IQN        
Sbjct: 181 -NYSPPAAST---STSTSTAAAATAATSTLFQNEAAVAPRTSSSTKMEIIQNEVVFPEML 240

[Close]

BLAST of Sed0026144 vs. ExPASy TrEMBL
Match: A0A6J1JIJ7 (ethylene-responsive transcription factor 11-like OS=Cucurbita maxima OX=3661 GN=LOC111486119 PE=4 SV=1)

HSP 1 Score: 228.4 bits (581), Expect = 3.0e-56
Identity = 143/261 (54.79%), Postives = 166/261 (63.60%), Query Frame = 0


Query: 1   MVMASDPPQPPFRRITEEQEVSVIVAALTHVISG----DLQF-----------PSA-AVD 60
           M+MAS      F R+T+EQE  VIV ALT V+SG     L+F           PS     
Sbjct: 1   MLMASHHNSAAFPRLTDEQEGVVIVDALTQVVSGAAAAGLEFRHDHFLRLLHPPSTNNTT 60

Query: 61  SLLPPSSDFDTCLVCRIHGCLGCNFF-------PATTHGGDGGSNSGRRVRRVKKNYRGV 120
           ++ PPSSDFDTC +CRI GCLGCNFF       P TT      +NSGRR+RR+KKNYRGV
Sbjct: 61  TIFPPSSDFDTCHICRISGCLGCNFFSTPYSHQPTTTTTDKNNNNSGRRIRRLKKNYRGV 120

Query: 121 RQRPWGKWAAEIRDPKRAARVWLGTFNTAVEAARAYDAAATKFRGPRAKLNFPSTDNSLS 180
           RQRPWGKWAAEIRDPKRAARVWLGTFNTA EAARAYD AA KFRGPRA+LNFPS+DNSL+
Sbjct: 121 RQRPWGKWAAEIRDPKRAARVWLGTFNTAEEAARAYDEAAIKFRGPRARLNFPSSDNSLT 180

Query: 181 SMPLINNYSSSTSATAPPATAAVPTAVSAAATSHFYPNEA-----EPSS---IQNSAAAV 231
           +     NYS       P A+    T+ +  ATS+F  NEA      PSS   IQN+    
Sbjct: 181 TF----NYS------PPAASTTTSTSATVTATSNFNRNEAAVAPRTPSSMMKIQNNVVLA 240

[Close]

BLAST of Sed0026144 vs. ExPASy TrEMBL
Match: A0A1S3BZ96 (ethylene-responsive transcription factor ERF109-like OS=Cucumis melo OX=3656 GN=LOC103495234 PE=4 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 7.2e-50
Identity = 131/260 (50.38%), Postives = 155/260 (59.62%), Query Frame = 0


Query: 1   MVMASDPPQPPFRRITEEQEVSVIVAALTHVISG--------------DLQFPSAAVDSL 60
           M+MAS    PPFRRITEEQE+SV+V ALT V+SG               L FP       
Sbjct: 1   MLMAS---SPPFRRITEEQELSVMVDALTQVVSGASSSTLSFHHDHFLRLLFPPITTTPP 60

Query: 61  LPPSSDFDTCLVCRIHGCLGCNFF----------PATTHGGDGGSNSGRRVRRVKKNYRG 120
              SS+FDTC +C+I+GCLGC+FF           AT    +  +N GRRV+R+KKNYRG
Sbjct: 61  FSSSSEFDTCPLCKINGCLGCHFFSAPDSTTTTTAATPAANNNNNNPGRRVKRLKKNYRG 120

Query: 121 VRQRPWGKWAAEIRDPKRAARVWLGTFNTAVEAARAYDAAATKFRGPRAKLNFPSTDNSL 180
           VRQRPWGKWAAEIRDPKRAARVWLGTFNTA +AARAYD AA KFRGPRAKLNFP  D SL
Sbjct: 121 VRQRPWGKWAAEIRDPKRAARVWLGTFNTAEDAARAYDEAAIKFRGPRAKLNFPFPDYSL 180

Query: 181 SSM------PLINNYSSSTSATAPPATAAVPTAVSAAATSHFYPNEAEPSSIQNSAAAVL 231
           S++      P  +  +S T A APP     P       TS     E   +          
Sbjct: 181 STLIGHSSPPAASTTTSLTPAAAPPPPPP-PVLPRTTTTSSSMKIEVTQNDFLFPEIFNN 240

[Close]

BLAST of Sed0026144 vs. TAIR 10
Match: AT4G34410.1 (redox responsive transcription factor 1 )

HSP 1 Score: 147.9 bits (372), Expect = 1.0e-35
Identity = 102/207 (49.28%), Postives = 122/207 (58.94%), Query Frame = 0


Query: 2   VMASDPPQPPFRRITEEQEVSVIVAALTHVISGDLQ------FPS-AAVDSLLPPSSDFD 61
           V A  P +    +++ EQE+SVIV+AL HVISG+ +      F S + V S   P  D D
Sbjct: 11  VGAPAPTRYQKEQLSPEQELSVIVSALQHVISGENETAPCQGFSSDSTVISAGMPRLDSD 70

Query: 62  TCLVCRIHGCLGCNFFPATTHGGD----------GGSNSGR---------------RVRR 121
           TC VCRI GCLGCN+F A     +            SN  R               R R+
Sbjct: 71  TCQVCRIEGCLGCNYFFAPNQRIEKNHQQEEEITSSSNRRRESSPVAKKAEGGGKIRKRK 130

Query: 122 VKKN-YRGVRQRPWGKWAAEIRDPKRAARVWLGTFNTAVEAARAYDAAATKFRGPRAKLN 174
            KKN YRGVRQRPWGK+AAEIRDPKRA RVWLGTF TA +AARAYD AA  FRGPRAKLN
Sbjct: 131 NKKNGYRGVRQRPWGKFAAEIRDPKRATRVWLGTFETAEDAARAYDRAAIGFRGPRAKLN 190

[Close]

BLAST of Sed0026144 vs. TAIR 10
Match: AT2G33710.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 103.2 bits (256), Expect = 2.8e-22
Identity = 48/60 (80.00%), Postives = 54/60 (90.00%), Query Frame = 0


Query: 91  KKNYRGVRQRPWGKWAAEIRDPKRAARVWLGTFNTAVEAARAYDAAATKFRGPRAKLNFP 150
           ++NYRGVRQRPWGKWAAEIRDP +AARVWLGTF+TA EAA AYD AA +FRG +AKLNFP
Sbjct: 67  QRNYRGVRQRPWGKWAAEIRDPNKAARVWLGTFDTAEEAALAYDKAAFEFRGHKAKLNFP 126

[Close]

BLAST of Sed0026144 vs. TAIR 10
Match: AT2G33710.2 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 103.2 bits (256), Expect = 2.8e-22
Identity = 48/60 (80.00%), Postives = 54/60 (90.00%), Query Frame = 0


Query: 91  KKNYRGVRQRPWGKWAAEIRDPKRAARVWLGTFNTAVEAARAYDAAATKFRGPRAKLNFP 150
           ++NYRGVRQRPWGKWAAEIRDP +AARVWLGTF+TA EAA AYD AA +FRG +AKLNFP
Sbjct: 67  QRNYRGVRQRPWGKWAAEIRDPNKAARVWLGTFDTAEEAALAYDKAAFEFRGHKAKLNFP 126

[Close]

BLAST of Sed0026144 vs. TAIR 10
Match: AT1G43160.1 (related to AP2 6 )

HSP 1 Score: 102.8 bits (255), Expect = 3.7e-22
Identity = 48/59 (81.36%), Postives = 51/59 (86.44%), Query Frame = 0


Query: 92  KNYRGVRQRPWGKWAAEIRDPKRAARVWLGTFNTAVEAARAYDAAATKFRGPRAKLNFP 151
           K YRGVRQRPWGKWAAEIRDP +A RVWLGTF TA  AARAYDAAA +FRG +AKLNFP
Sbjct: 59  KKYRGVRQRPWGKWAAEIRDPHKATRVWLGTFETAEAAARAYDAAALRFRGSKAKLNFP 117

[Close]

BLAST of Sed0026144 vs. TAIR 10
Match: AT3G14230.1 (related to AP2 2 )

HSP 1 Score: 102.4 bits (254), Expect = 4.8e-22
Identity = 50/90 (55.56%), Postives = 62/90 (68.89%), Query Frame = 0


Query: 65  LGCNFFPATTHGGDGGSNSGRRVRRVKKNYRGVRQRPWGKWAAEIRDPKRAARVWLGTFN 124
           +G  +   T    +    S +R R  K  YRG+RQRPWGKWAAEIRDP++ +R WLGTF+
Sbjct: 101 VGSAYAKKTVESAEQAEKSSKRKR--KNQYRGIRQRPWGKWAAEIRDPRKGSREWLGTFD 160

Query: 125 TAVEAARAYDAAATKFRGPRAKLNFPSTDN 155
           TA EAARAYDAAA + RG +AK+NFP   N
Sbjct: 161 TAEEAARAYDAAARRIRGTKAKVNFPEEKN 188

The following BLAST results are available for this feature:

BLAST of Sed0026144 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6588657.1	1.1e-60	57.47	Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp....	[more]
XP_022927864.1	7.2e-60	57.31	ethylene-responsive transcription factor 11-like isoform X1 [Cucurbita moschata]	[more]
KAG7025116.1	3.6e-59	57.36	Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp....	[more]
XP_023530126.1	3.9e-58	56.86	ethylene-responsive transcription factor 11-like [Cucurbita pepo subsp. pepo]	[more]
XP_022927865.1	9.7e-57	55.77	ethylene-responsive transcription factor 11-like isoform X2 [Cucurbita moschata]	[more]

BLAST of Sed0026144 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SZ06	1.4e-34	49.28	Ethylene-responsive transcription factor ERF109 OS=Arabidopsis thaliana OX=3702 ...	[more]
P93007	4.0e-21	80.00	Ethylene-responsive transcription factor ERF112 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q7G1L2	5.2e-21	81.36	Ethylene-responsive transcription factor RAP2-6 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q70II3	6.8e-21	64.29	Ethylene-responsive transcription factor ERF110 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9FH54	6.8e-21	45.86	Ethylene-responsive transcription factor ERF114 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of Sed0026144 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EJ70	3.5e-60	57.31	ethylene-responsive transcription factor 11-like isoform X1 OS=Cucurbita moschat...	[more]
A0A6J1EQ36	4.7e-57	55.77	ethylene-responsive transcription factor 11-like isoform X2 OS=Cucurbita moschat...	[more]
A0A2H4V3T2	6.1e-57	55.81	Ethylene-responsive transcription factor OS=Luffa aegyptiaca OX=3670 PE=2 SV=1	[more]
A0A6J1JIJ7	3.0e-56	54.79	ethylene-responsive transcription factor 11-like OS=Cucurbita maxima OX=3661 GN=...	[more]
A0A1S3BZ96	7.2e-50	50.38	ethylene-responsive transcription factor ERF109-like OS=Cucumis melo OX=3656 GN=...	[more]

BLAST of Sed0026144 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G34410.1	1.0e-35	49.28	redox responsive transcription factor 1	[more]
AT2G33710.1	2.8e-22	80.00	Integrase-type DNA-binding superfamily protein	[more]
AT2G33710.2	2.8e-22	80.00	Integrase-type DNA-binding superfamily protein	[more]
AT1G43160.1	3.7e-22	81.36	related to AP2 6	[more]
AT3G14230.1	4.8e-22	55.56	related to AP2 2	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 116..132 score: 69.2 coord: 94..105 score: 76.67
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 93..156 e-value: 3.0E-38 score: 143.1
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 93..142 e-value: 2.9E-14 score: 53.1
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 93..150 score: 24.579044
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 92..150 e-value: 1.72963E-24 score: 90.0235
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 92..151 e-value: 2.3E-28 score: 100.1
None	No IPR available	PANTHER	PTHR31677	AP2 DOMAIN CLASS TRANSCRIPTION FACTOR	coord: 13..176
None	No IPR available	PANTHER	PTHR31677:SF107	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF109	coord: 13..176
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 93..150

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0026144.1	Sed0026144.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity