Sed0026004 (gene) Chayote v1

Overview


Name	Sed0026004
Type	gene
Organism	Sechium edule (Chayote v1)
Description	auxin-responsive protein SAUR21-like
Location	LG04: 47021327 .. 47021962 (-)
RNA-Seq Expression	Sed0026004
Synteny	Sed0026004

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCGTCCAAGATGAGTGCTTTGGATAATACCGCTTTATACTAAAACCCACAATCCAAAACCCCCCAAAAAGTTCCATATAAATTCAACACAAGTTTCATCCAACACCCATCAAAATTCAAGCCCTCAAAACCCAAAAATCTCTTTCAAAGTTCTCTCGGACATTTCGTCGAACACTTCGCGTAATGGGTATCCGCCGTCTACCGGAGATCATTCTTCACGCCAAGAAAATCACTCACCGGCAAGTCGGCTTTGAAGCGGCGAAGCACCGATCGCCGTCGTCGGATGTTCCGAAAGGCCATTTCGTGGTCTACGTTGGGGAAGAAGAAGAACGAGAGAAGAAGCGATTTGTGGTGCCATTGTCGTACTTGAAGAATCCTCTGTTTCAAGAGCTGCTGAGTAAGGCTGCTGAAGAGTTTGGATTCGAACATAAGCTTGGTGGGATTACGATTCCTTGCGCTCAGGATCATTTCTTGGGGTTAACTTCTCGATTGAGCAGACCCATAAGCTGAAATTGATCAAAAGTGAGAACCCATTTGTTGATTGAAATTTGGTAGAGATCTGTAAATTAATCGATGATTTTCTTATTATATTAGGGTTCGTCTAGAAAGGTGTTGTGATTGTACTGTAGGGGAAAC

mRNA sequence

CTCGTCCAAGATGAGTGCTTTGGATAATACCGCTTTATACTAAAACCCACAATCCAAAACCCCCCAAAAAGTTCCATATAAATTCAACACAAGTTTCATCCAACACCCATCAAAATTCAAGCCCTCAAAACCCAAAAATCTCTTTCAAAGTTCTCTCGGACATTTCGTCGAACACTTCGCGTAATGGGTATCCGCCGTCTACCGGAGATCATTCTTCACGCCAAGAAAATCACTCACCGGCAAGTCGGCTTTGAAGCGGCGAAGCACCGATCGCCGTCGTCGGATGTTCCGAAAGGCCATTTCGTGGTCTACGTTGGGGAAGAAGAAGAACGAGAGAAGAAGCGATTTGTGGTGCCATTGTCGTACTTGAAGAATCCTCTGTTTCAAGAGCTGCTGAGTAAGGCTGCTGAAGAGTTTGGATTCGAACATAAGCTTGGTGGGATTACGATTCCTTGCGCTCAGGATCATTTCTTGGGGTTAACTTCTCGATTGAGCAGACCCATAAGCTGAAATTGATCAAAAGTGAGAACCCATTTGTTGATTGAAATTTGGTAGAGATCTGTAAATTAATCGATGATTTTCTTATTATATTAGGGTTCGTCTAGAAAGGTGTTGTGATTGTACTGTAGGGGAAAC

Coding sequence (CDS)

ATGGGTATCCGCCGTCTACCGGAGATCATTCTTCACGCCAAGAAAATCACTCACCGGCAAGTCGGCTTTGAAGCGGCGAAGCACCGATCGCCGTCGTCGGATGTTCCGAAAGGCCATTTCGTGGTCTACGTTGGGGAAGAAGAAGAACGAGAGAAGAAGCGATTTGTGGTGCCATTGTCGTACTTGAAGAATCCTCTGTTTCAAGAGCTGCTGAGTAAGGCTGCTGAAGAGTTTGGATTCGAACATAAGCTTGGTGGGATTACGATTCCTTGCGCTCAGGATCATTTCTTGGGGTTAACTTCTCGATTGAGCAGACCCATAAGCTGA

Protein sequence

MGIRRLPEIILHAKKITHRQVGFEAAKHRSPSSDVPKGHFVVYVGEEEEREKKRFVVPLSYLKNPLFQELLSKAAEEFGFEHKLGGITIPCAQDHFLGLTSRLSRPIS

Homology

[Close]

BLAST of Sed0026004 vs. NCBI nr
Match: XP_022928472.1 (auxin-responsive protein SAUR21-like [Cucurbita moschata] >XP_023529823.1 auxin-responsive protein SAUR21-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 189.9 bits (481), Expect = 1.2e-44
Identity = 94/108 (87.04%), Postives = 100/108 (92.59%), Query Frame = 0


Query: 1   MGIRRLPEIILHAKKITHRQVGFEAAKHRSPSSDVPKGHFVVYVGEEEEREKKRFVVPLS 60
           MGI RLPEIILHAK+ITHRQ+GFE  KHR  SSDVPKGHFVVYVGE+EE E+KRFVVPLS
Sbjct: 1   MGI-RLPEIILHAKQITHRQIGFEVMKHRPASSDVPKGHFVVYVGEDEE-ERKRFVVPLS 60

Query: 61  YLKNPLFQELLSKAAEEFGFEHKLGGITIPCAQDHFLGLTSRLSRPIS 109
           YLKNPLFQELLSKAAEEFGFEH+ GGITIPCAQDHFLGLTSRL+ PIS
Sbjct: 61  YLKNPLFQELLSKAAEEFGFEHQFGGITIPCAQDHFLGLTSRLNTPIS 106

[Close]

BLAST of Sed0026004 vs. NCBI nr
Match: XP_022989530.1 (auxin-responsive protein SAUR21-like [Cucurbita maxima])

HSP 1 Score: 188.7 bits (478), Expect = 2.6e-44
Identity = 93/108 (86.11%), Postives = 100/108 (92.59%), Query Frame = 0


Query: 1   MGIRRLPEIILHAKKITHRQVGFEAAKHRSPSSDVPKGHFVVYVGEEEEREKKRFVVPLS 60
           MGI RLPEIILHAK+ITHRQ+GFE  KHR  SSDVPKGHFVVYVG E+E+E+KRFVVPLS
Sbjct: 1   MGI-RLPEIILHAKQITHRQIGFEVMKHRPASSDVPKGHFVVYVG-EDEKERKRFVVPLS 60

Query: 61  YLKNPLFQELLSKAAEEFGFEHKLGGITIPCAQDHFLGLTSRLSRPIS 109
           YLKNPLFQELLSKAAEEFGFEH+ GGITIPCAQDHFLGLTSRL+ PIS
Sbjct: 61  YLKNPLFQELLSKAAEEFGFEHQFGGITIPCAQDHFLGLTSRLNTPIS 106

[Close]

BLAST of Sed0026004 vs. NCBI nr
Match: XP_038887901.1 (auxin-responsive protein SAUR21-like [Benincasa hispida])

HSP 1 Score: 179.5 bits (454), Expect = 1.6e-41
Identity = 94/114 (82.46%), Postives = 99/114 (86.84%), Query Frame = 0


Query: 1   MGIRRLPEIILHAKKIT------HRQVGFEAAKHRSPSSDVPKGHFVVYVGEEEEREKKR 60
           MGI  LP IILHAK+IT      HRQVG+E  K RS SSDVPKGHFVVYVGEEEE E+KR
Sbjct: 1   MGI-HLPAIILHAKQITHRAAPSHRQVGYEVTKQRSASSDVPKGHFVVYVGEEEE-ERKR 60

Query: 61  FVVPLSYLKNPLFQELLSKAAEEFGFEHKLGGITIPCAQDHFLGLTSRLSRPIS 109
           FVVPLSYLKNPLFQELLSKAA+EFGFEH+LGGITIPCAQD FLGLTSRLSRPIS
Sbjct: 61  FVVPLSYLKNPLFQELLSKAADEFGFEHQLGGITIPCAQDQFLGLTSRLSRPIS 112

[Close]

BLAST of Sed0026004 vs. NCBI nr
Match: XP_004144830.2 (auxin-responsive protein SAUR21 [Cucumis sativus] >KGN43219.1 hypothetical protein Csa_020319 [Cucumis sativus])

HSP 1 Score: 171.8 bits (434), Expect = 3.3e-39
Identity = 90/115 (78.26%), Postives = 98/115 (85.22%), Query Frame = 0


Query: 1   MGIRRLPEIILHAKKIT-------HRQVGFEAAKHRSPSSDVPKGHFVVYVGEEEEREKK 60
           MGI RLPEIILHAK+IT       HRQVG+E  KHRS  SDVPKGHFVVYVGEEEE ++K
Sbjct: 1   MGI-RLPEIILHAKQITHRAAAPSHRQVGYEVTKHRSSFSDVPKGHFVVYVGEEEE-DRK 60

Query: 61  RFVVPLSYLKNPLFQELLSKAAEEFGFEHKLGGITIPCAQDHFLGLTSRLSRPIS 109
           RFVVPLSYLKNPLFQELLSKAA+EFGF++  GGITIPCAQD FLGLTSRL+R IS
Sbjct: 61  RFVVPLSYLKNPLFQELLSKAADEFGFDNHFGGITIPCAQDQFLGLTSRLNRLIS 113

[Close]

BLAST of Sed0026004 vs. NCBI nr
Match: XP_008447999.1 (PREDICTED: auxin-responsive protein SAUR21-like [Cucumis melo])

HSP 1 Score: 169.1 bits (427), Expect = 2.1e-38
Identity = 88/115 (76.52%), Postives = 98/115 (85.22%), Query Frame = 0


Query: 1   MGIRRLPEIILHAKKIT-------HRQVGFEAAKHRSPSSDVPKGHFVVYVGEEEEREKK 60
           MGI R PEIILHAK+IT       HRQVG+E  K RS SSDVPKGHFVVYVGEEEE ++K
Sbjct: 1   MGI-RFPEIILHAKQITHRVAAPSHRQVGYEVTKQRSSSSDVPKGHFVVYVGEEEE-DRK 60

Query: 61  RFVVPLSYLKNPLFQELLSKAAEEFGFEHKLGGITIPCAQDHFLGLTSRLSRPIS 109
           RFVVPLSYLKNPLFQELLSKAA+EFGF+++ GGITIPCA+D FLGLTSRL+R IS
Sbjct: 61  RFVVPLSYLKNPLFQELLSKAADEFGFDNQFGGITIPCAEDQFLGLTSRLNRLIS 113

[Close]

BLAST of Sed0026004 vs. ExPASy Swiss-Prot
Match: Q9FJF9 (Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana OX=3702 GN=SAUR21 PE=2 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 1.7e-19
Identity = 46/83 (55.42%), Postives = 59/83 (71.08%), Query Frame = 0


Query: 21  VGFEAAKHRSPSSDVPKGHFVVYVGEEEEREKKRFVVPLSYLKNPLFQELLSKAAEEFGF 80
           +G +    RS +S  PKG   VYVGE    +KKR++VPLSYL  P FQ LLSK+ EEFGF
Sbjct: 8   LGAKKILSRSTASAAPKGFLAVYVGES---QKKRYLVPLSYLSQPSFQALLSKSEEEFGF 67

Query: 81  EHKLGGITIPCAQDHFLGLTSRL 104
           +H +GG+TIPC +D F+ +TSRL
Sbjct: 68  DHPMGGLTIPCPEDTFINVTSRL 87

[Close]

BLAST of Sed0026004 vs. ExPASy Swiss-Prot
Match: Q9FK62 (Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana OX=3702 GN=SAUR24 PE=2 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 3.0e-19
Identity = 49/94 (52.13%), Postives = 61/94 (64.89%), Query Frame = 0


Query: 10  ILHAKKITHRQVGFEAAKHRSPSSDVPKGHFVVYVGEEEEREKKRFVVPLSYLKNPLFQE 69
           +L AKKI  R  G          S  PKG   VYVGE    +KKR++VP+SYL  P FQ 
Sbjct: 7   LLGAKKILSRSTG--------AGSAAPKGFLAVYVGES---QKKRYLVPVSYLNQPSFQA 66

Query: 70  LLSKAAEEFGFEHKLGGITIPCAQDHFLGLTSRL 104
           LLSK+ EEFGF+H +GG+TIPC +D F+ +TSRL
Sbjct: 67  LLSKSEEEFGFDHPMGGLTIPCPEDTFINVTSRL 89

[Close]

BLAST of Sed0026004 vs. ExPASy Swiss-Prot
Match: Q9FJG0 (Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana OX=3702 GN=SAUR20 PE=1 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 5.1e-19
Identity = 48/96 (50.00%), Postives = 62/96 (64.58%), Query Frame = 0


Query: 10  ILHAKKITHRQVGFEAAKHRSPSSDVPKGHFVVYVGEEEEREKKRFVVPLSYLKNPLFQE 69
           +L AKKI  R          + +S  PKG   VYVGE    +KKR++VP+SYL  P FQ 
Sbjct: 7   LLGAKKILSRST--------TAASAAPKGFLAVYVGES---QKKRYLVPISYLNQPSFQA 66

Query: 70  LLSKAAEEFGFEHKLGGITIPCAQDHFLGLTSRLSR 106
           LLSK+ EEFGF+H +GG+TIPC +D F+ +TSR  R
Sbjct: 67  LLSKSEEEFGFDHPMGGLTIPCPEDTFINVTSRFQR 91

[Close]

BLAST of Sed0026004 vs. ExPASy Swiss-Prot
Match: Q9FJG1 (Auxin-responsive protein SAUR19 OS=Arabidopsis thaliana OX=3702 GN=SAUR19 PE=2 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 1.1e-18
Identity = 49/94 (52.13%), Postives = 60/94 (63.83%), Query Frame = 0


Query: 10  ILHAKKITHRQVGFEAAKHRSPSSDVPKGHFVVYVGEEEEREKKRFVVPLSYLKNPLFQE 69
           +L AKKI  R          +  S  PKG   VYVGE    +KKR++VPLSYL  P FQ 
Sbjct: 7   LLGAKKILSRST--------AAGSAAPKGFLAVYVGES---QKKRYLVPLSYLSQPSFQA 66

Query: 70  LLSKAAEEFGFEHKLGGITIPCAQDHFLGLTSRL 104
           LLSK+ EEFGF H +GG+TIPC +D F+ +TSRL
Sbjct: 67  LLSKSEEEFGFAHPMGGLTIPCPEDTFINVTSRL 89

[Close]

BLAST of Sed0026004 vs. ExPASy Swiss-Prot
Match: Q9FJF6 (Auxin-responsive protein SAUR23 OS=Arabidopsis thaliana OX=3702 GN=SAUR23 PE=2 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 1.5e-18
Identity = 51/94 (54.26%), Postives = 63/94 (67.02%), Query Frame = 0


Query: 10  ILHAKKITHRQVGFEAAKHRSPSSDVPKGHFVVYVGEEEEREKKRFVVPLSYLKNPLFQE 69
           +L AKKI  R     AA   +P    PKG   VYVGE    +KKR++VPLSYL  P FQ 
Sbjct: 7   LLVAKKILSR----SAAAVSAP----PKGFLAVYVGES---QKKRYLVPLSYLNQPSFQA 66

Query: 70  LLSKAAEEFGFEHKLGGITIPCAQDHFLGLTSRL 104
           LLSK+ EEFGF+H +GG+TIPC +D F+ +TSRL
Sbjct: 67  LLSKSEEEFGFDHPMGGLTIPCPEDTFINVTSRL 89

[Close]

BLAST of Sed0026004 vs. ExPASy TrEMBL
Match: A0A6J1EK13 (auxin-responsive protein SAUR21-like OS=Cucurbita moschata OX=3662 GN=LOC111435269 PE=3 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 5.6e-45
Identity = 94/108 (87.04%), Postives = 100/108 (92.59%), Query Frame = 0


Query: 1   MGIRRLPEIILHAKKITHRQVGFEAAKHRSPSSDVPKGHFVVYVGEEEEREKKRFVVPLS 60
           MGI RLPEIILHAK+ITHRQ+GFE  KHR  SSDVPKGHFVVYVGE+EE E+KRFVVPLS
Sbjct: 1   MGI-RLPEIILHAKQITHRQIGFEVMKHRPASSDVPKGHFVVYVGEDEE-ERKRFVVPLS 60

Query: 61  YLKNPLFQELLSKAAEEFGFEHKLGGITIPCAQDHFLGLTSRLSRPIS 109
           YLKNPLFQELLSKAAEEFGFEH+ GGITIPCAQDHFLGLTSRL+ PIS
Sbjct: 61  YLKNPLFQELLSKAAEEFGFEHQFGGITIPCAQDHFLGLTSRLNTPIS 106

[Close]

BLAST of Sed0026004 vs. ExPASy TrEMBL
Match: A0A6J1JMM0 (auxin-responsive protein SAUR21-like OS=Cucurbita maxima OX=3661 GN=LOC111486593 PE=3 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 1.2e-44
Identity = 93/108 (86.11%), Postives = 100/108 (92.59%), Query Frame = 0


Query: 1   MGIRRLPEIILHAKKITHRQVGFEAAKHRSPSSDVPKGHFVVYVGEEEEREKKRFVVPLS 60
           MGI RLPEIILHAK+ITHRQ+GFE  KHR  SSDVPKGHFVVYVG E+E+E+KRFVVPLS
Sbjct: 1   MGI-RLPEIILHAKQITHRQIGFEVMKHRPASSDVPKGHFVVYVG-EDEKERKRFVVPLS 60

Query: 61  YLKNPLFQELLSKAAEEFGFEHKLGGITIPCAQDHFLGLTSRLSRPIS 109
           YLKNPLFQELLSKAAEEFGFEH+ GGITIPCAQDHFLGLTSRL+ PIS
Sbjct: 61  YLKNPLFQELLSKAAEEFGFEHQFGGITIPCAQDHFLGLTSRLNTPIS 106

[Close]

BLAST of Sed0026004 vs. ExPASy TrEMBL
Match: A0A0A0K2G9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G009150 PE=3 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 1.6e-39
Identity = 90/115 (78.26%), Postives = 98/115 (85.22%), Query Frame = 0


Query: 1   MGIRRLPEIILHAKKIT-------HRQVGFEAAKHRSPSSDVPKGHFVVYVGEEEEREKK 60
           MGI RLPEIILHAK+IT       HRQVG+E  KHRS  SDVPKGHFVVYVGEEEE ++K
Sbjct: 1   MGI-RLPEIILHAKQITHRAAAPSHRQVGYEVTKHRSSFSDVPKGHFVVYVGEEEE-DRK 60

Query: 61  RFVVPLSYLKNPLFQELLSKAAEEFGFEHKLGGITIPCAQDHFLGLTSRLSRPIS 109
           RFVVPLSYLKNPLFQELLSKAA+EFGF++  GGITIPCAQD FLGLTSRL+R IS
Sbjct: 61  RFVVPLSYLKNPLFQELLSKAADEFGFDNHFGGITIPCAQDQFLGLTSRLNRLIS 113

[Close]

BLAST of Sed0026004 vs. ExPASy TrEMBL
Match: A0A1S3BJM3 (auxin-responsive protein SAUR21-like OS=Cucumis melo OX=3656 GN=LOC103490313 PE=3 SV=1)

HSP 1 Score: 169.1 bits (427), Expect = 1.0e-38
Identity = 88/115 (76.52%), Postives = 98/115 (85.22%), Query Frame = 0


Query: 1   MGIRRLPEIILHAKKIT-------HRQVGFEAAKHRSPSSDVPKGHFVVYVGEEEEREKK 60
           MGI R PEIILHAK+IT       HRQVG+E  K RS SSDVPKGHFVVYVGEEEE ++K
Sbjct: 1   MGI-RFPEIILHAKQITHRVAAPSHRQVGYEVTKQRSSSSDVPKGHFVVYVGEEEE-DRK 60

Query: 61  RFVVPLSYLKNPLFQELLSKAAEEFGFEHKLGGITIPCAQDHFLGLTSRLSRPIS 109
           RFVVPLSYLKNPLFQELLSKAA+EFGF+++ GGITIPCA+D FLGLTSRL+R IS
Sbjct: 61  RFVVPLSYLKNPLFQELLSKAADEFGFDNQFGGITIPCAEDQFLGLTSRLNRLIS 113

[Close]

BLAST of Sed0026004 vs. ExPASy TrEMBL
Match: A0A5A7U3A0 (HVA22-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold106G00950 PE=3 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 3.3e-37
Identity = 84/111 (75.68%), Postives = 95/111 (85.59%), Query Frame = 0


Query: 1   MGIRRLPEIILHAKKIT-------HRQVGFEAAKHRSPSSDVPKGHFVVYVGEEEEREKK 60
           MGI R PEIILHAK+IT       HRQVG+E  K RS SSDVPKGHFVVYVGEEEE ++K
Sbjct: 1   MGI-RFPEIILHAKQITHRVAAPSHRQVGYEVTKQRSSSSDVPKGHFVVYVGEEEE-DRK 60

Query: 61  RFVVPLSYLKNPLFQELLSKAAEEFGFEHKLGGITIPCAQDHFLGLTSRLS 105
           RFVVPLSYLKNPLFQELLSKAA+EFGF+++ GGITIPCA+D FLGLTSR++
Sbjct: 61  RFVVPLSYLKNPLFQELLSKAADEFGFDNQFGGITIPCAEDQFLGLTSRMA 109

[Close]

BLAST of Sed0026004 vs. TAIR 10
Match: AT4G38840.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 102.1 bits (253), Expect = 3.0e-22
Identity = 50/100 (50.00%), Postives = 69/100 (69.00%), Query Frame = 0


Query: 5   RLPEIILHAKKITHRQVGFEAAKHRSPSSDVPKGHFVVYVGEEEEREKKRFVVPLSYLKN 64
           R+P ++  +K+I  RQ    ++   S S DVPKG+  VYVGE+     KRFVVP+SYL  
Sbjct: 4   RIPRVLQSSKQIL-RQAKLLSSSSSSSSLDVPKGYLAVYVGEQ---NMKRFVVPVSYLDQ 63

Query: 65  PLFQELLSKAAEEFGFEHKLGGITIPCAQDHFLGLTSRLS 105
           P FQ+LL KA EEFGF+H +GG+TIPC+++ F+ L SR +
Sbjct: 64  PSFQDLLRKAEEEFGFDHPMGGLTIPCSEEIFIDLASRFN 99

[Close]

BLAST of Sed0026004 vs. TAIR 10
Match: AT4G34810.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 98.2 bits (243), Expect = 4.3e-21
Identity = 47/75 (62.67%), Postives = 57/75 (76.00%), Query Frame = 0


Query: 30  SPSSDVPKGHFVVYVGEEEEREKKRFVVPLSYLKNPLFQELLSKAAEEFGFEHKLGGITI 89
           S S  VPKGH  VYVGE+ E EKKRFVVP+S+L +P F+E LS+A EEFGF H +GG+TI
Sbjct: 30  SSSDHVPKGHVAVYVGEQIEMEKKRFVVPISFLNHPSFKEFLSRAEEEFGFNHPMGGLTI 89

Query: 90  PCAQDHFLGL-TSRL 104
           PC ++ FL L  SRL
Sbjct: 90  PCREEVFLDLIASRL 104

[Close]

BLAST of Sed0026004 vs. TAIR 10
Match: AT5G18030.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 96.7 bits (239), Expect = 1.2e-20
Identity = 46/83 (55.42%), Postives = 59/83 (71.08%), Query Frame = 0


Query: 21  VGFEAAKHRSPSSDVPKGHFVVYVGEEEEREKKRFVVPLSYLKNPLFQELLSKAAEEFGF 80
           +G +    RS +S  PKG   VYVGE    +KKR++VPLSYL  P FQ LLSK+ EEFGF
Sbjct: 8   LGAKKILSRSTASAAPKGFLAVYVGES---QKKRYLVPLSYLSQPSFQALLSKSEEEFGF 67

Query: 81  EHKLGGITIPCAQDHFLGLTSRL 104
           +H +GG+TIPC +D F+ +TSRL
Sbjct: 68  DHPMGGLTIPCPEDTFINVTSRL 87

[Close]

BLAST of Sed0026004 vs. TAIR 10
Match: AT2G21210.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 96.3 bits (238), Expect = 1.6e-20
Identity = 44/81 (54.32%), Postives = 59/81 (72.84%), Query Frame = 0


Query: 24  EAAKHRSPSSDVPKGHFVVYVGEEEEREKKRFVVPLSYLKNPLFQELLSKAAEEFGFEHK 83
           ++  H S +  +PKGH  VYVG  E  +K+RFVVP++YL +P FQ+LL KA EEFGF+H 
Sbjct: 17  KSLSHSSNNVAIPKGHLAVYVG--EMMQKRRFVVPVTYLSHPCFQKLLRKAEEEFGFDHP 76

Query: 84  LGGITIPCAQDHFLGLTSRLS 105
           +GG+TIPC +  F+ L SRLS
Sbjct: 77  MGGLTIPCTEQIFIDLASRLS 95

[Close]

BLAST of Sed0026004 vs. TAIR 10
Match: AT4G34770.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 96.3 bits (238), Expect = 1.6e-20
Identity = 45/75 (60.00%), Postives = 57/75 (76.00%), Query Frame = 0


Query: 30  SPSSDVPKGHFVVYVGEEEEREKKRFVVPLSYLKNPLFQELLSKAAEEFGFEHKLGGITI 89
           S +++VPKGH  VYVGE   R  KRFV+P+SYL +PLFQ LL+ A EEFGF+H +GG+TI
Sbjct: 30  SGTNNVPKGHVAVYVGETYHR--KRFVIPISYLNHPLFQGLLNLAEEEFGFDHPMGGLTI 89

Query: 90  PCAQDHFLGLTSRLS 105
           PC +D+F  L S LS
Sbjct: 90  PCTEDYFTALASILS 102

The following BLAST results are available for this feature:

BLAST of Sed0026004 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022928472.1	1.2e-44	87.04	auxin-responsive protein SAUR21-like [Cucurbita moschata] >XP_023529823.1 auxin-...	[more]
XP_022989530.1	2.6e-44	86.11	auxin-responsive protein SAUR21-like [Cucurbita maxima]	[more]
XP_038887901.1	1.6e-41	82.46	auxin-responsive protein SAUR21-like [Benincasa hispida]	[more]
XP_004144830.2	3.3e-39	78.26	auxin-responsive protein SAUR21 [Cucumis sativus] >KGN43219.1 hypothetical prote...	[more]
XP_008447999.1	2.1e-38	76.52	PREDICTED: auxin-responsive protein SAUR21-like [Cucumis melo]	[more]

BLAST of Sed0026004 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FJF9	1.7e-19	55.42	Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana OX=3702 GN=SAUR21 PE=2 S...	[more]
Q9FK62	3.0e-19	52.13	Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana OX=3702 GN=SAUR24 PE=2 S...	[more]
Q9FJG0	5.1e-19	50.00	Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana OX=3702 GN=SAUR20 PE=1 S...	[more]
Q9FJG1	1.1e-18	52.13	Auxin-responsive protein SAUR19 OS=Arabidopsis thaliana OX=3702 GN=SAUR19 PE=2 S...	[more]
Q9FJF6	1.5e-18	54.26	Auxin-responsive protein SAUR23 OS=Arabidopsis thaliana OX=3702 GN=SAUR23 PE=2 S...	[more]

BLAST of Sed0026004 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EK13	5.6e-45	87.04	auxin-responsive protein SAUR21-like OS=Cucurbita moschata OX=3662 GN=LOC1114352...	[more]
A0A6J1JMM0	1.2e-44	86.11	auxin-responsive protein SAUR21-like OS=Cucurbita maxima OX=3661 GN=LOC111486593...	[more]
A0A0A0K2G9	1.6e-39	78.26	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G009150 PE=3 SV=1	[more]
A0A1S3BJM3	1.0e-38	76.52	auxin-responsive protein SAUR21-like OS=Cucumis melo OX=3656 GN=LOC103490313 PE=...	[more]
A0A5A7U3A0	3.3e-37	75.68	HVA22-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold106G0...	[more]

BLAST of Sed0026004 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G38840.1	3.0e-22	50.00	SAUR-like auxin-responsive protein family	[more]
AT4G34810.1	4.3e-21	62.67	SAUR-like auxin-responsive protein family	[more]
AT5G18030.1	1.2e-20	55.42	SAUR-like auxin-responsive protein family	[more]
AT2G21210.1	1.6e-20	54.32	SAUR-like auxin-responsive protein family	[more]
AT4G34770.1	1.6e-20	60.00	SAUR-like auxin-responsive protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 19..101 e-value: 5.6E-26 score: 90.6
None	No IPR available	PANTHER	PTHR31929	SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED	coord: 5..105
None	No IPR available	PANTHER	PTHR31929:SF129	AUXIN-INDUCED PROTEIN 15A-LIKE	coord: 5..105

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0026004.1	Sed0026004.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin
cellular_component	GO:0016021	integral component of membrane