Sed0025938 (gene) Chayote v1

Overview


Name	Sed0025938
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Meiotic recombination protein DMC1-like protein
Location	LG12: 6103108 .. 6106404 (-)
RNA-Seq Expression	Sed0025938
Synteny	Sed0025938

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGATCAGAGCGGAAGAACAGAGCCAGCAACTGCAGATTGTGGAACGCGAAGATATCGAGGATGAAGACGATTTGTTTGAAGCCATCGACAAATGTAAGTTTCTGAGCTTTGAACTTATAGTTAAGTTATCATTTCGTGATCTCAAACAAAACTTGATTTCATGACTGTTCGTGTTAGTGATTTGCTTGTTGTTCTCGTGGAGGTTGATTCACGAAACTGCAATGCCGATCAATTTTGTTTTTATGAAGAGTATTACGATCTTCTTTAGTGCGTCATGAAATCTGAATCGATTGATTTGCTCATTCTGGAGATATCTCGGCAGATTAGTTTACCGATCATTTCACTTCGCGAAACACTAGAATCAAGCTTAGCTAGGTTTATCGTTTTCTCGTTGTCAATTTTCTGAACTGTGAGAGTTTTTCTCAACTCGCGGAGGAATAGCTACTAATCTTAGTTAATTAACCGATTATCATGTTGTTCCACTGCATCCGAAGGAGTTCTTATGGTATTTTCTGTGCAGTGACTACTCATGGAATTAATGCTGGAGATGTGAAGAAGCTTCAAGATGCAGGGATATACACCTGCAATGGTTTGATGATGCACACGAAGAAGGTATGAGAATTTTCAAGTCAAATTATATAAATCCTAAAATGGATATGATTATAGTACTGACGAAGGATTTTGTATTCTAGCACTTGACCGGGATAAAAGGTTTATCCGAAGCGAAGGTTGATAAGATCTGCGAAGCAGCCGAAAAGCTAGTGGTGAGCGACTCGATCACCATTTCTATTATTCACAGACCTGTAGTATAATGTCTTACACGATGGCGTTACAATGCGATAAACTTCAGCTTTTCGTCAATTAACAATTGTTATTTATCTGTTGCTTTTCAGAATTTTGGTTATATCACTGGAAGCGATGCTCTGCTCAAGGTAAGTTGCTTCTCTTTTCGTTTTAGTAACAAATGGAGTATTCAATTTAATAGATCCAAAAAGTATAGTACGAATCGTCTCCATCTTCCATTTCGGATTTTCCGCATGTTGTAAGTTTTGCGTTTGGAATCTGTGTACGATTTTCTTTAGTTTTTTTAGTATCTCCTTGAAGGTCAATATATGATTTAGCAAATTACTGTCCGTGGTGAAATGCAGACTTAGTCATTGATTTTTGTTTGTAGAGAAAGTCCGTGGTTCGTATTACGACCGGTAGCCAGGCTCTCGATGAACTCTTAGGAGGCAAGTCCTGCTTTACGAAGTTCCTTTTTCACTATCTCGCAATTCATAAGCACTAACAGAAGTCGTTGTTTTGATTCTTACCAAAAGGTGGAATTGAAACTCTAGCGATCACGGAAGCTTTTGGAGAATTCAGGTGCGGATGTATATGCTGGCAGTTGCTTATATTTTGTTTATTGAAGATCGAAATCCTGTATTTAACTTACAGTTCTCCTCTGATTTCGTTAAACAAATGTGTAGATCCGGGAAAACGCAACTAGCACATACTCTATGCGTCTCTACGCAGGTTAATCTACCATCTCATCTGAACATTCAGCTACGTAGTTTTGGTCCTTTTTCGGTTATTAGGTCGATGAAATTTTAATAGTTATTTCTAGAAATCGTTTTTGCAACGTCAAAATCAAAATATAGCTCATGCCTTCCATTCTCCTGGCATCTGCCACAAAACTTACTCTTATTATTCTCCTTTGGAAGTAAATAGCTCACTAGAAGTGTAGGAATTAGAATTGAGATTGGAAGTATATACTTGTACTTCACATCTGATCTTTAGAAGTTAATTCGATTTATGTAATGCTAAATTTCGTAGCATGTGCATTGAAAAGAAAATTCAAGTTTACTTTGTCTTGCTTATATATCTCATATTTACTTGGCGCTTCTTTAGTTGCCTCAAATCTAATGATATATTAGCATTTGTTCTTGTCGTTTACCTTCGCAGCTTCCTACCAACATGCGTGGAGGGAATGGAAAGGTTGCTTATATCGACACTGAAGGCACTTTGTATCCTCTTTTGAAGCTTCTTTTATTATGTCGTTGTTGCGGCACGTCTAGTGAAATGAAATTATTATCTTCGTAGATTCTGCGTTTTCTATATGTCCTCTCCTTAACTACATGCACTTGCAGCCGACCTGATCGAATTGTGCCTATAGCTGAAAGATTTGGCATGGACCCGGGTGCTGTTCTTGACAATGTAAGCACCATGTTTTAATATAGACTTGTCAGTCAGAACTACTGGTTGAAAATATTTTATTAATTTGCTGCTAATGAAATAGATCATATATGCTCGTGCCTACACCTACGAACATCAGCATAGCCTCCTGCTCGGTCTTGCGGCAAAAATGTCTGAAGAACCGTTCAAACTTCTGGTGAGTCTCACATTATAACCTGTAGTTCAAACGTTAAATACTATGGCATCTGATGCTGCACATTCTATCTCCCAATTTCAGATTGTTGACTCTATCATTGCACTTTTTCGAGTGGATTTCACTGGAAGAGGAGAACTTGCAGAGCGTCAGGTCGAATCAAATAGACTTCAATAATAGACAACCTTTTCGAGTTCGATTTCTCTAGCCTAACTTCACTTGTCTCTTTGTTTCATCATTTATGACACAAAGCTGGTTGTCACATGCAGCAAAAACTAGCCCAAATGTTGTCTCGATTAATCAAAATTGCAGAAGAGTTTAACGTAGCAGTTTACATGACAAACCAAGGTATCAATTGATCTTTATGGAAGTCGCTTCTAGTGCTTCATCTAACGTTTATCTCATTCGGGAAATCCATGTCAGACATGTTAGCTCAATTTCTGGTCCGAATATTTTGACCTTGGTACTTGTATTAGCTGGATTGACTTGGTCTAAATCGTTTTGTACATTAAACTGGTGTATATTCTTCATAATGTTGTTTACTGAACGTTATCATGTTGTCGATAACAGTTGTTGCAGATCCAGGTGGTGGAGTGTTCGTATCAGACCCCAAAAAACCAGCAGGAGGCCATGTTCTTGCACATGCTGCTACGGTAAGGTTGATGTTCAGGAAAGGCAAAGGCGAACAGCGCATCTGTAAGGTGTTCGATGCCCCTAATTTGCCAGAGTCAGAAGCTATATCCTTAACTCACATCACGTCGCACTTAACACCTTCACTTATGTTTTCTAGTTAGTATAGAAATCAATCCCATAAATCTCAAATATGATTCATAGAGAAGTTCTAAACTTCAACTGACTGAAGAGAAAAAGGCCTATGTCTCTCATACAAATTTGCCTTGACAAAAACACGTATTTCAGATAACAC

mRNA sequence

ATGTTGATCAGAGCGGAAGAACAGAGCCAGCAACTGCAGATTGTGGAACGCGAAGATATCGAGGATGAAGACGATTTGTTTGAAGCCATCGACAAATTGACTACTCATGGAATTAATGCTGGAGATGTGAAGAAGCTTCAAGATGCAGGGATATACACCTGCAATGGTTTGATGATGCACACGAAGAAGCACTTGACCGGGATAAAAGGTTTATCCGAAGCGAAGGTTGATAAGATCTGCGAAGCAGCCGAAAAGCTAGTGAATTTTGGTTATATCACTGGAAGCGATGCTCTGCTCAAGCTTCCTACCAACATGCGTGGAGGGAATGGAAAGGTTGCTTATATCGACACTGAAGGCACTTTCCGACCTGATCGAATTGTGCCTATAGCTGAAAGATTTGGCATGGACCCGGGTGCTGTTCTTGACAATATCATATATGCTCGTGCCTACACCTACGAACATCAGCATAGCCTCCTGCTCGGTCTTGCGGCAAAAATGTCTGAAGAACCGTTCAAACTTCTGATTGTTGACTCTATCATTGCACTTTTTCGAGTGGATTTCACTGGAAGAGGAGAACTTGCAGAGCGTCAGCAAAAACTAGCCCAAATGTTGTCTCGATTAATCAAAATTGCAGAAGAGTTTAACGTAGCAGTTTACATGACAAACCAAGTTGTTGCAGATCCAGGTGGTGGAGTGTTCGTATCAGACCCCAAAAAACCAGCAGGAGGCCATGTTCTTGCACATGCTGCTACGGTAAGGTTGATGTTCAGGAAAGGCAAAGGCGAACAGCGCATCTGTAAGGTGTTCGATGCCCCTAATTTGCCAGAGTCAGAAGCTATATCCTTAACTCACATCACGTCGCACTTAACACCTTCACTTATGTTTTCTAGTTAGTATAGAAATCAATCCCATAAATCTCAAATATGATTCATAGAGAAGTTCTAAACTTCAACTGACTGAAGAGAAAAAGGCCTATGTCTCTCATACAAATTTGCCTTGACAAAAACACGTATTTCAGATAACAC

Coding sequence (CDS)

ATGTTGATCAGAGCGGAAGAACAGAGCCAGCAACTGCAGATTGTGGAACGCGAAGATATCGAGGATGAAGACGATTTGTTTGAAGCCATCGACAAATTGACTACTCATGGAATTAATGCTGGAGATGTGAAGAAGCTTCAAGATGCAGGGATATACACCTGCAATGGTTTGATGATGCACACGAAGAAGCACTTGACCGGGATAAAAGGTTTATCCGAAGCGAAGGTTGATAAGATCTGCGAAGCAGCCGAAAAGCTAGTGAATTTTGGTTATATCACTGGAAGCGATGCTCTGCTCAAGCTTCCTACCAACATGCGTGGAGGGAATGGAAAGGTTGCTTATATCGACACTGAAGGCACTTTCCGACCTGATCGAATTGTGCCTATAGCTGAAAGATTTGGCATGGACCCGGGTGCTGTTCTTGACAATATCATATATGCTCGTGCCTACACCTACGAACATCAGCATAGCCTCCTGCTCGGTCTTGCGGCAAAAATGTCTGAAGAACCGTTCAAACTTCTGATTGTTGACTCTATCATTGCACTTTTTCGAGTGGATTTCACTGGAAGAGGAGAACTTGCAGAGCGTCAGCAAAAACTAGCCCAAATGTTGTCTCGATTAATCAAAATTGCAGAAGAGTTTAACGTAGCAGTTTACATGACAAACCAAGTTGTTGCAGATCCAGGTGGTGGAGTGTTCGTATCAGACCCCAAAAAACCAGCAGGAGGCCATGTTCTTGCACATGCTGCTACGGTAAGGTTGATGTTCAGGAAAGGCAAAGGCGAACAGCGCATCTGTAAGGTGTTCGATGCCCCTAATTTGCCAGAGTCAGAAGCTATATCCTTAACTCACATCACGTCGCACTTAACACCTTCACTTATGTTTTCTAGTTAG

Protein sequence

MLIRAEEQSQQLQIVEREDIEDEDDLFEAIDKLTTHGINAGDVKKLQDAGIYTCNGLMMHTKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDALLKLPTNMRGGNGKVAYIDTEGTFRPDRIVPIAERFGMDPGAVLDNIIYARAYTYEHQHSLLLGLAAKMSEEPFKLLIVDSIIALFRVDFTGRGELAERQQKLAQMLSRLIKIAEEFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAHAATVRLMFRKGKGEQRICKVFDAPNLPESEAISLTHITSHLTPSLMFSS

Homology

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BLAST of Sed0025938 vs. NCBI nr
Match: XP_031739053.1 (meiotic recombination protein DMC1 homolog isoform X1 [Cucumis sativus])

HSP 1 Score: 537.7 bits (1384), Expect = 6.2e-149
Identity = 281/338 (83.14%), Postives = 287/338 (84.91%), Query Frame = 0


Query: 3   IRAEEQSQQLQIVEREDIEDEDDLFEAIDKLTTHGINAGDVKKLQDAGIYTCNGLMMHTK 62
           ++AEEQSQQLQ+VEREDIEDEDDLFEAIDKLT+HGINAGDVKKLQDAGIYTCNGLMMHTK
Sbjct: 5   LKAEEQSQQLQLVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLMMHTK 64

Query: 63  KHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDALLK---------------------- 122
           KHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDALLK                      
Sbjct: 65  KHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDALLKRKSVVRITTGSQALDELLGGGI 124

Query: 123 ----------------------------LPTNMRGGNGKVAYIDTEGTFRPDRIVPIAER 182
                                       LPT+MRGGNGKVAYIDTEGTFRPDRIVPIAER
Sbjct: 125 ETLAITEAFGEFRSGKTQLAHTLCVSTQLPTSMRGGNGKVAYIDTEGTFRPDRIVPIAER 184

Query: 183 FGMDPGAVLDNIIYARAYTYEHQHSLLLGLAAKMSEEPFKLLIVDSIIALFRVDFTGRGE 242
           FGMDPGAVLDNIIYARAYTYEHQH+LLLGLAAKMSEEPFKLLIVDSIIALFRVDFTGRGE
Sbjct: 185 FGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFTGRGE 244

Query: 243 LAERQQKLAQMLSRLIKIAEEFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAHAATV 291
           LAERQQKLAQMLSRL KIAEEFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAHAATV
Sbjct: 245 LAERQQKLAQMLSRLTKIAEEFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAHAATV 304

[Close]

BLAST of Sed0025938 vs. NCBI nr
Match: XP_022974436.1 (meiotic recombination protein DMC1 homolog isoform X1 [Cucurbita maxima])

HSP 1 Score: 533.1 bits (1372), Expect = 1.5e-147
Identity = 278/336 (82.74%), Postives = 284/336 (84.52%), Query Frame = 0


Query: 3   IRAEEQSQQLQIVEREDIEDEDDLFEAIDKLTTHGINAGDVKKLQDAGIYTCNGLMMHTK 62
           ++AEEQSQQLQIVEREDIEDEDDLFEAIDKLT+HGINAGDVKKLQDAGIYTCNGLMMHTK
Sbjct: 6   LKAEEQSQQLQIVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLMMHTK 65

Query: 63  KHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDALLK---------------------- 122
           KHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSD LL+                      
Sbjct: 66  KHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDVLLRRKSVVRITTGSQALDELLGGGI 125

Query: 123 ----------------------------LPTNMRGGNGKVAYIDTEGTFRPDRIVPIAER 182
                                       LPTNMRGGNGKVAYIDTEGTFRPDRIVPIAER
Sbjct: 126 ETLAITEAFGEFRSGKTQLAHTLCVSTQLPTNMRGGNGKVAYIDTEGTFRPDRIVPIAER 185

Query: 183 FGMDPGAVLDNIIYARAYTYEHQHSLLLGLAAKMSEEPFKLLIVDSIIALFRVDFTGRGE 242
           FGMDPGAVLDNIIYARAYTYEHQH+LLLGLAAKMSEEPFKLLIVDSIIALFRVDFTGRGE
Sbjct: 186 FGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFTGRGE 245

Query: 243 LAERQQKLAQMLSRLIKIAEEFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAHAATV 289
           LAERQQKLAQMLSRL KIAEE+NVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAHAATV
Sbjct: 246 LAERQQKLAQMLSRLTKIAEEYNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAHAATV 305

[Close]

BLAST of Sed0025938 vs. NCBI nr
Match: KAG6597413.1 (hypothetical protein SDJN03_10593, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 531.6 bits (1368), Expect = 4.5e-147
Identity = 277/336 (82.44%), Postives = 283/336 (84.23%), Query Frame = 0


Query: 3   IRAEEQSQQLQIVEREDIEDEDDLFEAIDKLTTHGINAGDVKKLQDAGIYTCNGLMMHTK 62
           ++AEEQSQQLQIVEREDIEDEDDLFEAIDKLT+HGINAGDVKKLQDAGIYTCNGLMMHTK
Sbjct: 6   LKAEEQSQQLQIVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLMMHTK 65

Query: 63  KHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDALLK---------------------- 122
           KHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSD LL+                      
Sbjct: 66  KHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDVLLRRKSVVRITTGSQALDELLGGGI 125

Query: 123 ----------------------------LPTNMRGGNGKVAYIDTEGTFRPDRIVPIAER 182
                                       LPTNMRGGNGKVAYIDTEGTFRPDRIVPIAER
Sbjct: 126 ETLAITEAFGEFRSGKTQLAHTLCVSTQLPTNMRGGNGKVAYIDTEGTFRPDRIVPIAER 185

Query: 183 FGMDPGAVLDNIIYARAYTYEHQHSLLLGLAAKMSEEPFKLLIVDSIIALFRVDFTGRGE 242
           FGMDPGAVLDNIIYARAYTYEHQH+LLLGLAAKMSEEPFKLLIVDSIIALFRVDFTGRGE
Sbjct: 186 FGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFTGRGE 245

Query: 243 LAERQQKLAQMLSRLIKIAEEFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAHAATV 289
           LAERQQKLAQMLSRL KIAEE+NVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAHAATV
Sbjct: 246 LAERQQKLAQMLSRLTKIAEEYNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAHAATV 305

[Close]

BLAST of Sed0025938 vs. NCBI nr
Match: XP_022138203.1 (LOW QUALITY PROTEIN: meiotic recombination protein DMC1 homolog [Momordica charantia])

HSP 1 Score: 523.1 bits (1346), Expect = 1.6e-144
Identity = 274/337 (81.31%), Postives = 281/337 (83.38%), Query Frame = 0


Query: 3   IRAEEQSQQLQIVEREDIEDEDDLFEAIDKLTTHGINAGDVKKLQDAGIYTCNGLMMHTK 62
           ++AEEQSQQLQ+VEREDIEDEDDLFEAIDKLT+HGINAGDVKKLQDAGIYTCNGLMMHTK
Sbjct: 5   LKAEEQSQQLQLVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLMMHTK 64

Query: 63  KHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDALLK---------------------- 122
           KHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDALLK                      
Sbjct: 65  KHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDALLKRKSVVRITTGSQALDELLGGGI 124

Query: 123 ----------------------------LPTNMRGGNGKVAYIDTEGTFRPDRIVPIAER 182
                                       LPT+MRGGNGKVAYIDTEGTFRPDRIVPIAER
Sbjct: 125 ETLAITEAFGEFRSGKTQLAHTLCVSTQLPTHMRGGNGKVAYIDTEGTFRPDRIVPIAER 184

Query: 183 FGMDPGAVLDNIIYARAYTYEHQHSLLLGLAAKMSEEPFKLLIVDSIIALFRVDFTGRGE 242
           FGMDPGAVLDNIIYARAYTYEHQH+LLLGLAAKMSEEPFKLLIVDSIIALFRVDFTGRGE
Sbjct: 185 FGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFTGRGE 244

Query: 243 LAERQQKLAQMLSRLIKIAEEFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAHAATV 290
           LAERQQKLAQMLSRL KIAEEFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAHAATV
Sbjct: 245 LAERQQKLAQMLSRLTKIAEEFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAHAATV 304

[Close]

BLAST of Sed0025938 vs. NCBI nr
Match: TYK17232.1 (meiotic recombination protein DMC1-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 518.5 bits (1334), Expect = 3.9e-143
Identity = 271/329 (82.37%), Postives = 278/329 (84.50%), Query Frame = 0


Query: 3   IRAEEQSQQLQIVEREDIEDEDDLFEAIDKLTTHGINAGDVKKLQDAGIYTCNGLMMHTK 62
           ++AEEQSQQLQ+VEREDIEDEDDLFEAIDKLT+HGINAGDVKKLQDAGIYTCNGLMMHTK
Sbjct: 5   LKAEEQSQQLQLVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLMMHTK 64

Query: 63  KHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDALLK---------------------- 122
           KHLTGIKGLSEAKVDKICEAA+KLVNFGYITGSDALLK                      
Sbjct: 65  KHLTGIKGLSEAKVDKICEAADKLVNFGYITGSDALLKRKSVVRITTGSQALDELLGGGI 124

Query: 123 ----------------------------LPTNMRGGNGKVAYIDTEGTFRPDRIVPIAER 182
                                       LPT+MRGGNGKVAYIDTEGTFRPDRIVPIAER
Sbjct: 125 ETLAITEAFGEFRSGKTQLAHTLCVSTQLPTSMRGGNGKVAYIDTEGTFRPDRIVPIAER 184

Query: 183 FGMDPGAVLDNIIYARAYTYEHQHSLLLGLAAKMSEEPFKLLIVDSIIALFRVDFTGRGE 242
           FGMDPGAVLDNIIYARAYTYEHQH+LLLGLAAKMSEEPFKLLIVDSIIALFRVDFTGRGE
Sbjct: 185 FGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFTGRGE 244

Query: 243 LAERQQKLAQMLSRLIKIAEEFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAHAATV 282
           LAERQQKLAQMLSRL KIAEEFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAHAATV
Sbjct: 245 LAERQQKLAQMLSRLTKIAEEFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAHAATV 304

[Close]

BLAST of Sed0025938 vs. ExPASy Swiss-Prot
Match: Q96449 (Meiotic recombination protein DMC1 homolog OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 493.0 bits (1268), Expect = 2.3e-138
Identity = 254/328 (77.44%), Postives = 273/328 (83.23%), Query Frame = 0


Query: 3   IRAEEQSQQLQIVEREDIEDEDDLFEAIDKLTTHGINAGDVKKLQDAGIYTCNGLMMHTK 62
           +++EE S QLQ+VEREDI+D++DLFEAIDKL   GINAGDVKKLQDAGIYTCNGLMMHTK
Sbjct: 5   LKSEESSGQLQLVEREDIDDDEDLFEAIDKLIAQGINAGDVKKLQDAGIYTCNGLMMHTK 64

Query: 63  KHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDALLK---------------------- 122
           K+LTGIKGLSEAKVDKICEAAEKLVNFGYITGSDALLK                      
Sbjct: 65  KNLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDALLKRKSVIRITTGSQALDELLGGGV 124

Query: 123 ----------------------------LPTNMRGGNGKVAYIDTEGTFRPDRIVPIAER 182
                                       LPTNMRGGNGKVAYIDTEGTFRPDRIVPIAER
Sbjct: 125 ETSAITEAFGEFRSGKTQLAHTLCVSTQLPTNMRGGNGKVAYIDTEGTFRPDRIVPIAER 184

Query: 183 FGMDPGAVLDNIIYARAYTYEHQHSLLLGLAAKMSEEPFKLLIVDSIIALFRVDFTGRGE 242
           FGMDPGAVLDNIIYARAYTYEHQ++LLLGLAAKMSEEPF+LLIVDS+IALFRVDF+GRGE
Sbjct: 185 FGMDPGAVLDNIIYARAYTYEHQYNLLLGLAAKMSEEPFRLLIVDSVIALFRVDFSGRGE 244

Query: 243 LAERQQKLAQMLSRLIKIAEEFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAHAATV 281
           LA+RQQKLAQMLSRLIKIAEEFNVAVYMTNQV++DPGGGVFV+DPKKPAGGHVLAHAATV
Sbjct: 245 LADRQQKLAQMLSRLIKIAEEFNVAVYMTNQVISDPGGGVFVTDPKKPAGGHVLAHAATV 304

[Close]

BLAST of Sed0025938 vs. ExPASy Swiss-Prot
Match: Q39009 (Meiotic recombination protein DMC1 homolog OS=Arabidopsis thaliana OX=3702 GN=DMC1 PE=1 SV=2)

HSP 1 Score: 465.7 bits (1197), Expect = 3.9e-130
Identity = 238/327 (72.78%), Postives = 268/327 (81.96%), Query Frame = 0


Query: 3   IRAEEQSQQLQIVEREDIEDEDDLFEAIDKLTTHGINAGDVKKLQDAGIYTCNGLMMHTK 62
           ++AEE S Q+Q+VERE+ ++++DLFE IDKL   GINAGDVKKLQ+AGI+TCNGLMMHTK
Sbjct: 5   LKAEETS-QMQLVEREENDEDEDLFEMIDKLIAQGINAGDVKKLQEAGIHTCNGLMMHTK 64

Query: 63  KHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDALLK---------------------- 122
           K+LTGIKGLSEAKVDKICEAAEK+VNFGY+TGSDAL+K                      
Sbjct: 65  KNLTGIKGLSEAKVDKICEAAEKIVNFGYMTGSDALIKRKSVVKITTGCQALDDLLGGGI 124

Query: 123 ----------------------------LPTNMRGGNGKVAYIDTEGTFRPDRIVPIAER 182
                                       LPTNM+GGNGKVAYIDTEGTFRPDRIVPIAER
Sbjct: 125 ETSAITEAFGEFRSGKTQLAHTLCVTTQLPTNMKGGNGKVAYIDTEGTFRPDRIVPIAER 184

Query: 183 FGMDPGAVLDNIIYARAYTYEHQHSLLLGLAAKMSEEPFKLLIVDSIIALFRVDFTGRGE 242
           FGMDPGAVLDNIIYARAYTYEHQ++LLLGLAAKMSEEPF++LIVDSIIALFRVDFTGRGE
Sbjct: 185 FGMDPGAVLDNIIYARAYTYEHQYNLLLGLAAKMSEEPFRILIVDSIIALFRVDFTGRGE 244

Query: 243 LAERQQKLAQMLSRLIKIAEEFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAHAATV 280
           LA+RQQKLAQMLSRLIKIAEEFNVAVYMTNQV+ADPGGG+F+SDPKKPAGGHVLAHAAT+
Sbjct: 245 LADRQQKLAQMLSRLIKIAEEFNVAVYMTNQVIADPGGGMFISDPKKPAGGHVLAHAATI 304

[Close]

BLAST of Sed0025938 vs. ExPASy Swiss-Prot
Match: P37384 (Meiotic recombination protein DMC1 homolog OS=Lilium longiflorum OX=4690 GN=LIM15 PE=2 SV=1)

HSP 1 Score: 454.5 bits (1168), Expect = 9.1e-127
Identity = 237/328 (72.26%), Postives = 259/328 (78.96%), Query Frame = 0


Query: 4   RAEEQSQQLQIVEREDI-EDEDDLFEAIDKLTTHGINAGDVKKLQDAGIYTCNGLMMHTK 63
           R  E   QLQ+++R++  E+E+D FE+IDKL + GINAGDVKKLQDAGIYTCNGLMMHTK
Sbjct: 9   RRFESPGQLQLLDRQEAEEEEEDCFESIDKLISQGINAGDVKKLQDAGIYTCNGLMMHTK 68

Query: 64  KHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDALLK---------------------- 123
           K+LTGIKGLSEAKVDKICEAAEKLVN GYITGSD LLK                      
Sbjct: 69  KNLTGIKGLSEAKVDKICEAAEKLVNVGYITGSDVLLKRKSVIRITTGSQALDELLGGGI 128

Query: 124 ----------------------------LPTNMRGGNGKVAYIDTEGTFRPDRIVPIAER 183
                                       LP +M GGNGKVAYIDTEGTFRPDRIVPIAER
Sbjct: 129 ETLQITEAFGEFRSGKTQIAHTLCVSTQLPVSMHGGNGKVAYIDTEGTFRPDRIVPIAER 188

Query: 184 FGMDPGAVLDNIIYARAYTYEHQHSLLLGLAAKMSEEPFKLLIVDSIIALFRVDFTGRGE 243
           FGMD  AVLDNIIYARAYTYEHQ++LLL LAAKMSEEPF+LLIVDS+IALFRVDF+GRGE
Sbjct: 189 FGMDASAVLDNIIYARAYTYEHQYNLLLALAAKMSEEPFRLLIVDSVIALFRVDFSGRGE 248

Query: 244 LAERQQKLAQMLSRLIKIAEEFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAHAATV 281
           LAERQQKLAQMLSRL KIAEEFNVAVYMTNQV+ADPGGG+F+SDPKKPAGGHVLAHAATV
Sbjct: 249 LAERQQKLAQMLSRLTKIAEEFNVAVYMTNQVIADPGGGMFISDPKKPAGGHVLAHAATV 308

[Close]

BLAST of Sed0025938 vs. ExPASy Swiss-Prot
Match: Q7EAG4 (Meiotic recombination protein DMC1 homolog B OS=Oryza sativa subsp. indica OX=39946 GN=DMC1B PE=2 SV=1)

HSP 1 Score: 441.8 bits (1135), Expect = 6.1e-123
Identity = 224/324 (69.14%), Postives = 257/324 (79.32%), Query Frame = 0


Query: 7   EQSQQLQIVEREDIEDEDDLFEAIDKLTTHGINAGDVKKLQDAGIYTCNGLMMHTKKHLT 66
           ++  QLQ+++ E IE+E++ FE+IDKL + GIN+GDVKKLQDAGIYTCNGLMMHTKK LT
Sbjct: 8   DEGGQLQLMDAERIEEEEECFESIDKLISQGINSGDVKKLQDAGIYTCNGLMMHTKKSLT 67

Query: 67  GIKGLSEAKVDKICEAAEKLVNFGYITGSDALLK-------------------------- 126
           GIKGLSEAKVDKICEAAEKL++ G++TGSD L+K                          
Sbjct: 68  GIKGLSEAKVDKICEAAEKLLSQGFMTGSDLLIKRKSVVRITTGSQALDELLGGGIETLC 127

Query: 127 ------------------------LPTNMRGGNGKVAYIDTEGTFRPDRIVPIAERFGMD 186
                                   LP +M GGNGKVAYIDTEGTFRP+RIVPIAERFGMD
Sbjct: 128 ITEAFGEFRSGKTQLAHTLCVSTQLPIHMHGGNGKVAYIDTEGTFRPERIVPIAERFGMD 187

Query: 187 PGAVLDNIIYARAYTYEHQHSLLLGLAAKMSEEPFKLLIVDSIIALFRVDFTGRGELAER 246
             AVLDNIIYARAYTYEHQ++LLLGLAAKM+EEPF+LLIVDS+IALFRVDF+GRGELAER
Sbjct: 188 ANAVLDNIIYARAYTYEHQYNLLLGLAAKMAEEPFRLLIVDSVIALFRVDFSGRGELAER 247

Query: 247 QQKLAQMLSRLIKIAEEFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAHAATVRLMF 281
           QQKLAQMLSRL KIAEEFNVAVY+TNQV+ADPGGG+F++DPKKPAGGHVLAHAAT+RLM 
Sbjct: 248 QQKLAQMLSRLTKIAEEFNVAVYITNQVIADPGGGMFITDPKKPAGGHVLAHAATIRLML 307

[Close]

BLAST of Sed0025938 vs. ExPASy Swiss-Prot
Match: Q7GBF7 (Meiotic recombination protein DMC1 homolog B OS=Oryza sativa subsp. japonica OX=39947 GN=DMC1B PE=2 SV=1)

HSP 1 Score: 441.8 bits (1135), Expect = 6.1e-123
Identity = 224/324 (69.14%), Postives = 257/324 (79.32%), Query Frame = 0


Query: 7   EQSQQLQIVEREDIEDEDDLFEAIDKLTTHGINAGDVKKLQDAGIYTCNGLMMHTKKHLT 66
           ++  QLQ+++ E IE+E++ FE+IDKL + GIN+GDVKKLQDAGIYTCNGLMMHTKK LT
Sbjct: 8   DEGGQLQLMDAERIEEEEECFESIDKLISQGINSGDVKKLQDAGIYTCNGLMMHTKKSLT 67

Query: 67  GIKGLSEAKVDKICEAAEKLVNFGYITGSDALLK-------------------------- 126
           GIKGLSEAKVDKICEAAEKL++ G++TGSD L+K                          
Sbjct: 68  GIKGLSEAKVDKICEAAEKLLSQGFMTGSDLLIKRKSVVRITTGSQALDELLGGGIETLC 127

Query: 127 ------------------------LPTNMRGGNGKVAYIDTEGTFRPDRIVPIAERFGMD 186
                                   LP +M GGNGKVAYIDTEGTFRP+RIVPIAERFGMD
Sbjct: 128 ITEAFGEFRSGKTQLAHTLCVSTQLPIHMHGGNGKVAYIDTEGTFRPERIVPIAERFGMD 187

Query: 187 PGAVLDNIIYARAYTYEHQHSLLLGLAAKMSEEPFKLLIVDSIIALFRVDFTGRGELAER 246
             AVLDNIIYARAYTYEHQ++LLLGLAAKM+EEPF+LLIVDS+IALFRVDF+GRGELAER
Sbjct: 188 ANAVLDNIIYARAYTYEHQYNLLLGLAAKMAEEPFRLLIVDSVIALFRVDFSGRGELAER 247

Query: 247 QQKLAQMLSRLIKIAEEFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAHAATVRLMF 281
           QQKLAQMLSRL KIAEEFNVAVY+TNQV+ADPGGG+F++DPKKPAGGHVLAHAAT+RLM 
Sbjct: 248 QQKLAQMLSRLTKIAEEFNVAVYITNQVIADPGGGMFITDPKKPAGGHVLAHAATIRLML 307

[Close]

BLAST of Sed0025938 vs. ExPASy TrEMBL
Match: A0A0A0L5D5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G145750 PE=3 SV=1)

HSP 1 Score: 542.0 bits (1395), Expect = 1.6e-150
Identity = 284/340 (83.53%), Postives = 289/340 (85.00%), Query Frame = 0


Query: 1   MLIRAEEQSQQLQIVEREDIEDEDDLFEAIDKLTTHGINAGDVKKLQDAGIYTCNGLMMH 60
           ML+RAEEQSQQLQ+VEREDIEDEDDLFEAIDKLT+HGINAGDVKKLQDAGIYTCNGLMMH
Sbjct: 98  MLLRAEEQSQQLQLVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLMMH 157

Query: 61  TKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDALLK-------------------- 120
           TKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDALLK                    
Sbjct: 158 TKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDALLKRKSVVRITTGSQALDELLGG 217

Query: 121 ------------------------------LPTNMRGGNGKVAYIDTEGTFRPDRIVPIA 180
                                         LPT+MRGGNGKVAYIDTEGTFRPDRIVPIA
Sbjct: 218 GIETLAITEAFGEFRSGKTQLAHTLCVSTQLPTSMRGGNGKVAYIDTEGTFRPDRIVPIA 277

Query: 181 ERFGMDPGAVLDNIIYARAYTYEHQHSLLLGLAAKMSEEPFKLLIVDSIIALFRVDFTGR 240
           ERFGMDPGAVLDNIIYARAYTYEHQH+LLLGLAAKMSEEPFKLLIVDSIIALFRVDFTGR
Sbjct: 278 ERFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFTGR 337

Query: 241 GELAERQQKLAQMLSRLIKIAEEFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAHAA 291
           GELAERQQKLAQMLSRL KIAEEFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAHAA
Sbjct: 338 GELAERQQKLAQMLSRLTKIAEEFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAHAA 397

[Close]

BLAST of Sed0025938 vs. ExPASy TrEMBL
Match: A0A6J1IBC8 (meiotic recombination protein DMC1 homolog isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111473101 PE=3 SV=1)

HSP 1 Score: 533.1 bits (1372), Expect = 7.4e-148
Identity = 278/336 (82.74%), Postives = 284/336 (84.52%), Query Frame = 0


Query: 3   IRAEEQSQQLQIVEREDIEDEDDLFEAIDKLTTHGINAGDVKKLQDAGIYTCNGLMMHTK 62
           ++AEEQSQQLQIVEREDIEDEDDLFEAIDKLT+HGINAGDVKKLQDAGIYTCNGLMMHTK
Sbjct: 6   LKAEEQSQQLQIVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLMMHTK 65

Query: 63  KHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDALLK---------------------- 122
           KHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSD LL+                      
Sbjct: 66  KHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDVLLRRKSVVRITTGSQALDELLGGGI 125

Query: 123 ----------------------------LPTNMRGGNGKVAYIDTEGTFRPDRIVPIAER 182
                                       LPTNMRGGNGKVAYIDTEGTFRPDRIVPIAER
Sbjct: 126 ETLAITEAFGEFRSGKTQLAHTLCVSTQLPTNMRGGNGKVAYIDTEGTFRPDRIVPIAER 185

Query: 183 FGMDPGAVLDNIIYARAYTYEHQHSLLLGLAAKMSEEPFKLLIVDSIIALFRVDFTGRGE 242
           FGMDPGAVLDNIIYARAYTYEHQH+LLLGLAAKMSEEPFKLLIVDSIIALFRVDFTGRGE
Sbjct: 186 FGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFTGRGE 245

Query: 243 LAERQQKLAQMLSRLIKIAEEFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAHAATV 289
           LAERQQKLAQMLSRL KIAEE+NVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAHAATV
Sbjct: 246 LAERQQKLAQMLSRLTKIAEEYNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAHAATV 305

[Close]

BLAST of Sed0025938 vs. ExPASy TrEMBL
Match: A0A6J1CCE5 (LOW QUALITY PROTEIN: meiotic recombination protein DMC1 homolog OS=Momordica charantia OX=3673 GN=LOC111009434 PE=3 SV=1)

HSP 1 Score: 523.1 bits (1346), Expect = 7.7e-145
Identity = 274/337 (81.31%), Postives = 281/337 (83.38%), Query Frame = 0


Query: 3   IRAEEQSQQLQIVEREDIEDEDDLFEAIDKLTTHGINAGDVKKLQDAGIYTCNGLMMHTK 62
           ++AEEQSQQLQ+VEREDIEDEDDLFEAIDKLT+HGINAGDVKKLQDAGIYTCNGLMMHTK
Sbjct: 5   LKAEEQSQQLQLVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLMMHTK 64

Query: 63  KHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDALLK---------------------- 122
           KHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDALLK                      
Sbjct: 65  KHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDALLKRKSVVRITTGSQALDELLGGGI 124

Query: 123 ----------------------------LPTNMRGGNGKVAYIDTEGTFRPDRIVPIAER 182
                                       LPT+MRGGNGKVAYIDTEGTFRPDRIVPIAER
Sbjct: 125 ETLAITEAFGEFRSGKTQLAHTLCVSTQLPTHMRGGNGKVAYIDTEGTFRPDRIVPIAER 184

Query: 183 FGMDPGAVLDNIIYARAYTYEHQHSLLLGLAAKMSEEPFKLLIVDSIIALFRVDFTGRGE 242
           FGMDPGAVLDNIIYARAYTYEHQH+LLLGLAAKMSEEPFKLLIVDSIIALFRVDFTGRGE
Sbjct: 185 FGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFTGRGE 244

Query: 243 LAERQQKLAQMLSRLIKIAEEFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAHAATV 290
           LAERQQKLAQMLSRL KIAEEFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAHAATV
Sbjct: 245 LAERQQKLAQMLSRLTKIAEEFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAHAATV 304

[Close]

BLAST of Sed0025938 vs. ExPASy TrEMBL
Match: A0A5D3D096 (Meiotic recombination protein DMC1-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G00830 PE=3 SV=1)

HSP 1 Score: 518.5 bits (1334), Expect = 1.9e-143
Identity = 271/329 (82.37%), Postives = 278/329 (84.50%), Query Frame = 0


Query: 3   IRAEEQSQQLQIVEREDIEDEDDLFEAIDKLTTHGINAGDVKKLQDAGIYTCNGLMMHTK 62
           ++AEEQSQQLQ+VEREDIEDEDDLFEAIDKLT+HGINAGDVKKLQDAGIYTCNGLMMHTK
Sbjct: 5   LKAEEQSQQLQLVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLMMHTK 64

Query: 63  KHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDALLK---------------------- 122
           KHLTGIKGLSEAKVDKICEAA+KLVNFGYITGSDALLK                      
Sbjct: 65  KHLTGIKGLSEAKVDKICEAADKLVNFGYITGSDALLKRKSVVRITTGSQALDELLGGGI 124

Query: 123 ----------------------------LPTNMRGGNGKVAYIDTEGTFRPDRIVPIAER 182
                                       LPT+MRGGNGKVAYIDTEGTFRPDRIVPIAER
Sbjct: 125 ETLAITEAFGEFRSGKTQLAHTLCVSTQLPTSMRGGNGKVAYIDTEGTFRPDRIVPIAER 184

Query: 183 FGMDPGAVLDNIIYARAYTYEHQHSLLLGLAAKMSEEPFKLLIVDSIIALFRVDFTGRGE 242
           FGMDPGAVLDNIIYARAYTYEHQH+LLLGLAAKMSEEPFKLLIVDSIIALFRVDFTGRGE
Sbjct: 185 FGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFTGRGE 244

Query: 243 LAERQQKLAQMLSRLIKIAEEFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAHAATV 282
           LAERQQKLAQMLSRL KIAEEFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAHAATV
Sbjct: 245 LAERQQKLAQMLSRLTKIAEEFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAHAATV 304

[Close]

BLAST of Sed0025938 vs. ExPASy TrEMBL
Match: A0A5A7U4Y6 (Meiotic recombination protein DMC1-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold171G005680 PE=3 SV=1)

HSP 1 Score: 518.1 bits (1333), Expect = 2.5e-143
Identity = 271/330 (82.12%), Postives = 278/330 (84.24%), Query Frame = 0


Query: 3   IRAEEQSQQLQIVEREDIEDEDDLFEAIDKLTTHGINAGDVKKLQDAGIYTCNGLMMHTK 62
           ++AEEQSQQLQ+VEREDIEDEDDLFEAIDKLT+HGINAGDVKKLQDAGIYTCNGLMMHTK
Sbjct: 5   LKAEEQSQQLQLVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLMMHTK 64

Query: 63  KHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDALLK---------------------- 122
           KHLTGIKGLSEAKVDKICEAA+KLVNFGYITGSDALLK                      
Sbjct: 65  KHLTGIKGLSEAKVDKICEAADKLVNFGYITGSDALLKRKSVVRITTGSQALDELLGGKP 124

Query: 123 -----------------------------LPTNMRGGNGKVAYIDTEGTFRPDRIVPIAE 182
                                        LPT+MRGGNGKVAYIDTEGTFRPDRIVPIAE
Sbjct: 125 ASRLFFFHHLTHHKSGKTQLAHTLCVSTQLPTSMRGGNGKVAYIDTEGTFRPDRIVPIAE 184

Query: 183 RFGMDPGAVLDNIIYARAYTYEHQHSLLLGLAAKMSEEPFKLLIVDSIIALFRVDFTGRG 242
           RFGMDPGAVLDNIIYARAYTYEHQH+LLLGLAAKMSEEPFKLLIVDSIIALFRVDFTGRG
Sbjct: 185 RFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFTGRG 244

Query: 243 ELAERQQKLAQMLSRLIKIAEEFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAHAAT 282
           ELAERQQKLAQMLSRL KIAEEFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAHAAT
Sbjct: 245 ELAERQQKLAQMLSRLTKIAEEFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAHAAT 304

[Close]

BLAST of Sed0025938 vs. TAIR 10
Match: AT3G22880.1 (DNA repair (Rad51) family protein )

HSP 1 Score: 465.7 bits (1197), Expect = 2.8e-131
Identity = 238/327 (72.78%), Postives = 268/327 (81.96%), Query Frame = 0


Query: 3   IRAEEQSQQLQIVEREDIEDEDDLFEAIDKLTTHGINAGDVKKLQDAGIYTCNGLMMHTK 62
           ++AEE S Q+Q+VERE+ ++++DLFE IDKL   GINAGDVKKLQ+AGI+TCNGLMMHTK
Sbjct: 5   LKAEETS-QMQLVEREENDEDEDLFEMIDKLIAQGINAGDVKKLQEAGIHTCNGLMMHTK 64

Query: 63  KHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDALLK---------------------- 122
           K+LTGIKGLSEAKVDKICEAAEK+VNFGY+TGSDAL+K                      
Sbjct: 65  KNLTGIKGLSEAKVDKICEAAEKIVNFGYMTGSDALIKRKSVVKITTGCQALDDLLGGGI 124

Query: 123 ----------------------------LPTNMRGGNGKVAYIDTEGTFRPDRIVPIAER 182
                                       LPTNM+GGNGKVAYIDTEGTFRPDRIVPIAER
Sbjct: 125 ETSAITEAFGEFRSGKTQLAHTLCVTTQLPTNMKGGNGKVAYIDTEGTFRPDRIVPIAER 184

Query: 183 FGMDPGAVLDNIIYARAYTYEHQHSLLLGLAAKMSEEPFKLLIVDSIIALFRVDFTGRGE 242
           FGMDPGAVLDNIIYARAYTYEHQ++LLLGLAAKMSEEPF++LIVDSIIALFRVDFTGRGE
Sbjct: 185 FGMDPGAVLDNIIYARAYTYEHQYNLLLGLAAKMSEEPFRILIVDSIIALFRVDFTGRGE 244

Query: 243 LAERQQKLAQMLSRLIKIAEEFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAHAATV 280
           LA+RQQKLAQMLSRLIKIAEEFNVAVYMTNQV+ADPGGG+F+SDPKKPAGGHVLAHAAT+
Sbjct: 245 LADRQQKLAQMLSRLIKIAEEFNVAVYMTNQVIADPGGGMFISDPKKPAGGHVLAHAATI 304

[Close]

BLAST of Sed0025938 vs. TAIR 10
Match: AT5G20850.1 (RAS associated with diabetes protein 51 )

HSP 1 Score: 236.9 bits (603), Expect = 2.1e-62
Identity = 140/324 (43.21%), Postives = 185/324 (57.10%), Query Frame = 0


Query: 7   EQSQQLQIVEREDIEDEDDLFEAIDKLTTHGINAGDVKKLQDAGIYTCNGLMMHTKKHLT 66
           EQ +    V+++D E+       +++L   GI + DVKKL+DAG+ T  G+    +K L 
Sbjct: 5   EQRRNQNAVQQQDDEETQHGPFPVEQLQAAGIASVDVKKLRDAGLCTVEGVAYTPRKDLL 64

Query: 67  GIKGLSEAKVDKICEAAEKLVNFGYITGS-------------------DALL-------- 126
            IKG+S+AKVDKI EAA KLV  G+ + S                   D +L        
Sbjct: 65  QIKGISDAKVDKIVEAASKLVPLGFTSASQLHAQRQEIIQITSGSRELDKVLEGGIETGS 124

Query: 127 -----------------------KLPTNMRGGNGKVAYIDTEGTFRPDRIVPIAERFGMD 186
                                  +LP +  GG GK  YID EGTFRP R++ IA+RFG++
Sbjct: 125 ITELYGEFRSGKTQLCHTLCVTCQLPMDQGGGEGKAMYIDAEGTFRPQRLLQIADRFGLN 184

Query: 187 PGAVLDNIIYARAYTYEHQHSLLLGLAAKMSEEPFKLLIVDSIIALFRVDFTGRGELAER 246
              VL+N+ YARAY  +HQ  LLL  A+ M E  F LLIVDS  AL+R DF+GRGEL+ R
Sbjct: 185 GADVLENVAYARAYNTDHQSRLLLEAASMMIETRFALLIVDSATALYRTDFSGRGELSAR 244

Query: 247 QQKLAQMLSRLIKIAEEFNVAVYMTNQVVADPGGGVFVSDPK-KPAGGHVLAHAATVRLM 280
           Q  LA+ L  L K+A+EF VAV +TNQVVA   G    + P+ KP GG+++AHA T RL 
Sbjct: 245 QMHLAKFLRSLQKLADEFGVAVVITNQVVAQVDGSALFAGPQFKPIGGNIMAHATTTRLA 304

[Close]

BLAST of Sed0025938 vs. TAIR 10
Match: AT2G45280.1 (RAS associated with diabetes protein 51C )

HSP 1 Score: 84.3 bits (207), Expect = 1.8e-16
Identity = 63/202 (31.19%), Postives = 103/202 (50.99%), Query Frame = 0


Query: 99  LKLPTNMRGGNGKVAYIDTEGTFRPDRIVPIAE--------------------RFGMDPG 158
           +++P    G  GK  YIDTEG+F  +R + IAE                    +  M P 
Sbjct: 147 VQIPRECGGLGGKAIYIDTEGSFMVERALQIAEACVEDMEEYTGYMHKHFQANQVQMKPE 206

Query: 159 AVLDNIIYARAYTYEHQHSLLLGLAAKMSE-EPFKLLIVDSIIALFRVDFTGRGELAERQ 218
            +L+NI Y R  +Y  Q +L+  L   +SE +  K++IVDSI   FR D+    +LA+R 
Sbjct: 207 DILENIFYFRVCSYTEQIALVNHLEKFISENKDVKVVIVDSITFHFRQDY---DDLAQRT 266

Query: 219 QKLAQMLSRLIKIAEEFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAHAATVRLMFR 278
           + L++M  + +K+A++F++AV + NQV      G F       A G   +H+ T R++  
Sbjct: 267 RVLSEMALKFMKLAKKFSLAVVLLNQVTTKFSEGSF---QLALALGDSWSHSCTNRVIL- 326

Query: 279 KGKGEQRICKVFDAPNLPESEA 280
              G++R   +  +P+LP + A
Sbjct: 327 YWNGDERYAYIDKSPSLPSASA 341

[Close]

BLAST of Sed0025938 vs. TAIR 10
Match: AT2G45280.2 (RAS associated with diabetes protein 51C )

HSP 1 Score: 84.3 bits (207), Expect = 1.8e-16
Identity = 63/202 (31.19%), Postives = 103/202 (50.99%), Query Frame = 0


Query: 99  LKLPTNMRGGNGKVAYIDTEGTFRPDRIVPIAE--------------------RFGMDPG 158
           +++P    G  GK  YIDTEG+F  +R + IAE                    +  M P 
Sbjct: 171 VQIPRECGGLGGKAIYIDTEGSFMVERALQIAEACVEDMEEYTGYMHKHFQANQVQMKPE 230

Query: 159 AVLDNIIYARAYTYEHQHSLLLGLAAKMSE-EPFKLLIVDSIIALFRVDFTGRGELAERQ 218
            +L+NI Y R  +Y  Q +L+  L   +SE +  K++IVDSI   FR D+    +LA+R 
Sbjct: 231 DILENIFYFRVCSYTEQIALVNHLEKFISENKDVKVVIVDSITFHFRQDY---DDLAQRT 290

Query: 219 QKLAQMLSRLIKIAEEFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAHAATVRLMFR 278
           + L++M  + +K+A++F++AV + NQV      G F       A G   +H+ T R++  
Sbjct: 291 RVLSEMALKFMKLAKKFSLAVVLLNQVTTKFSEGSF---QLALALGDSWSHSCTNRVIL- 350

Query: 279 KGKGEQRICKVFDAPNLPESEA 280
              G++R   +  +P+LP + A
Sbjct: 351 YWNGDERYAYIDKSPSLPSASA 365

[Close]

BLAST of Sed0025938 vs. TAIR 10
Match: AT5G57450.1 (homolog of X-ray repair cross complementing 3 (XRCC3) )

HSP 1 Score: 50.1 bits (118), Expect = 3.7e-06
Identity = 32/138 (23.19%), Postives = 67/138 (48.55%), Query Frame = 0


Query: 100 KLPTNMRGGNGKVAYIDTEGTFRPDRIVPIAERFGMDPGAV--------LDNIIYARAYT 159
           +LP +  G NG   Y+ +E  F   R+  ++  F     ++         D++     ++
Sbjct: 64  QLPISHGGLNGSSLYLHSEFPFPFRRLHQLSHTFHQSNPSIYANYNDNPCDHVFVQNVHS 123

Query: 160 YEHQHSLLLGLAAKMSEE----PFKLLIVDSIIALFRVDFTGR-GELAERQQKLAQMLSR 219
            +H   ++  +   +       P KL+++DS+ ALFR +F     +L +R     ++  +
Sbjct: 124 VDHLFDIMPRIDGFVGNSKTRFPLKLIVLDSVAALFRSEFDNTPSDLKKRSSLFFKISGK 183

Query: 220 LIKIAEEFNVAVYMTNQV 225
           L ++A +F++A+ +TNQV
Sbjct: 184 LKQLASKFDLAIVITNQV 201

The following BLAST results are available for this feature:

BLAST of Sed0025938 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031739053.1	6.2e-149	83.14	meiotic recombination protein DMC1 homolog isoform X1 [Cucumis sativus]	[more]
XP_022974436.1	1.5e-147	82.74	meiotic recombination protein DMC1 homolog isoform X1 [Cucurbita maxima]	[more]
KAG6597413.1	4.5e-147	82.44	hypothetical protein SDJN03_10593, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022138203.1	1.6e-144	81.31	LOW QUALITY PROTEIN: meiotic recombination protein DMC1 homolog [Momordica chara...	[more]
TYK17232.1	3.9e-143	82.37	meiotic recombination protein DMC1-like protein [Cucumis melo var. makuwa]	[more]

BLAST of Sed0025938 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q96449	2.3e-138	77.44	Meiotic recombination protein DMC1 homolog OS=Glycine max OX=3847 PE=2 SV=1	[more]
Q39009	3.9e-130	72.78	Meiotic recombination protein DMC1 homolog OS=Arabidopsis thaliana OX=3702 GN=DM...	[more]
P37384	9.1e-127	72.26	Meiotic recombination protein DMC1 homolog OS=Lilium longiflorum OX=4690 GN=LIM1...	[more]
Q7EAG4	6.1e-123	69.14	Meiotic recombination protein DMC1 homolog B OS=Oryza sativa subsp. indica OX=39...	[more]
Q7GBF7	6.1e-123	69.14	Meiotic recombination protein DMC1 homolog B OS=Oryza sativa subsp. japonica OX=...	[more]

BLAST of Sed0025938 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L5D5	1.6e-150	83.53	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G145750 PE=3 SV=1	[more]
A0A6J1IBC8	7.4e-148	82.74	meiotic recombination protein DMC1 homolog isoform X1 OS=Cucurbita maxima OX=366...	[more]
A0A6J1CCE5	7.7e-145	81.31	LOW QUALITY PROTEIN: meiotic recombination protein DMC1 homolog OS=Momordica cha...	[more]
A0A5D3D096	1.9e-143	82.37	Meiotic recombination protein DMC1-like protein OS=Cucumis melo var. makuwa OX=1...	[more]
A0A5A7U4Y6	2.5e-143	82.12	Meiotic recombination protein DMC1-like protein OS=Cucumis melo var. makuwa OX=1...	[more]

BLAST of Sed0025938 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G22880.1	2.8e-131	72.78	DNA repair (Rad51) family protein	[more]
AT5G20850.1	2.1e-62	43.21	RAS associated with diabetes protein 51	[more]
AT2G45280.1	1.8e-16	31.19	RAS associated with diabetes protein 51C	[more]
AT2G45280.2	1.8e-16	31.19	RAS associated with diabetes protein 51C	[more]
AT5G57450.1	3.7e-06	23.19	homolog of X-ray repair cross complementing 3 (XRCC3)	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 95..288 e-value: 7.1E-58 score: 198.1
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 101..279
IPR013632	DNA recombination and repair protein Rad51-like, C-terminal	PFAM	PF08423	Rad51	coord: 100..280 e-value: 5.7E-80 score: 268.3
IPR016467	DNA recombination and repair protein, RecA-like	PIRSF	PIRSF005856	Rad51	coord: 16..100 e-value: 1.3E-15 score: 55.1 coord: 96..285 e-value: 9.0E-79 score: 262.7
None	No IPR available	GENE3D	1.10.150.20		coord: 7..90 e-value: 4.4E-30 score: 105.5
None	No IPR available	PANTHER	PTHR22942:SF64	MEIOTIC RECOMBINATION PROTEIN DMC1-LIKE PROTEIN	coord: 14..100 coord: 100..282
None	No IPR available	PANTHER	PTHR22942	RECA/RAD51/RADA DNA STRAND-PAIRING FAMILY MEMBER	coord: 14..100
None	No IPR available	PANTHER	PTHR22942	RECA/RAD51/RADA DNA STRAND-PAIRING FAMILY MEMBER	coord: 100..282
IPR020587	DNA recombination and repair protein RecA, monomer-monomer interface	PROSITE	PS50163	RECA_3	coord: 230..279 score: 15.767197
IPR020588	DNA recombination and repair protein RecA-like, ATP-binding domain	PROSITE	PS50162	RECA_2	coord: 88..224 score: 24.972294
IPR033925	Rad51/DMC1/RadA	CDD	cd01123	Rad51_DMC1_radA	coord: 101..279 e-value: 1.75435E-96 score: 282.165
IPR010995	DNA repair Rad51/transcription factor NusA, alpha-helical	SUPERFAMILY	47794	Rad51 N-terminal domain-like	coord: 22..89

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0025938.1	Sed0025938.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0070192	chromosome organization involved in meiotic cell cycle
biological_process	GO:0000730	DNA recombinase assembly
biological_process	GO:0006312	mitotic recombination
biological_process	GO:0007131	reciprocal meiotic recombination
biological_process	GO:0042148	strand invasion
biological_process	GO:0006259	DNA metabolic process
biological_process	GO:0006281	DNA repair
cellular_component	GO:0000794	condensed nuclear chromosome
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0008094	ATP-dependent activity, acting on DNA
molecular_function	GO:0000150	DNA strand exchange activity
molecular_function	GO:0003690	double-stranded DNA binding
molecular_function	GO:0003697	single-stranded DNA binding
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0000166	nucleotide binding