Sed0025828 (gene) Chayote v1

Overview


Name	Sed0025828
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Unknown protein
Location	LG01: 12481258 .. 12482148 (-)
RNA-Seq Expression	Sed0025828
Synteny	Sed0025828

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACATTTCTTCTCTCTTTAAACCCTAATTCTCTCTTTTTCTTGCCCTTCCATGGAAAATCTCACCGACAGGAAGAGATTTCGCGACCAGTTCGACGACTCGCTCGCCGACTCGGCCGAGTCGAAGCTCAGGCCACTCAACTCAACGGAGTCGAACGATTCGAGAATCGATTTACCGGAGCCGGAGGAGTTGCTCAGCATCCTCGAAGATGAGAGTCTTCAAGGTCTTGAACTCGATTCGTTCATCAGAAGCTTCGAGGCGGAGATGGAGGCTCCACCGCCGGCGGATCAGAATGAGAGTCCTCAACCGGAACTCGGATATCTATTCGAGGCGTCGGATCATGAACTCGGCCTGCCGCCGACGCTAGGTTCAGTTCCGGTGGACGCGATTGATTTTACGACGGGGATTTCTTCGCCTGGTTTGTTCGATTTGGACGGGAATCTAGGGTTTGGGGATGAGATACCGTGTTATGACTCGTTCGAGATCGGAACCGGCATTGGCTCCGGCGCGGCGGAGGAGTTTGTTGCGTTGGGCGGTTTGTTTGATTACTCGGACGTGCCGTTTCGGCCGGAGTCGTTGTCGGCTTCGTAGGGTTGCTTTCGACGTGTGTTGGTGTGGGACCCGACGTCGTTTTAAGCATGTAGGGTTGTTGTGTACATCTTTGAAGGACAAACACTGATCTCAGAATAGAAATTCAGAATTTCCTAATCAAACAAAAAGCCAATGTAGAGACTTACTTTTATTACGTTTTTTTAAATGTTTAATTTGCTTTTTTTCTTTTCTATTTTTTTTGGCTAAAAAATGATAATTTGAGATTAACTATTTTGATAGGCAACCTATCGCTTTCTTTCTCAAAACTACGACTATTTCTTTTGCTCGGGTATTTAATCGGA

mRNA sequence

ACATTTCTTCTCTCTTTAAACCCTAATTCTCTCTTTTTCTTGCCCTTCCATGGAAAATCTCACCGACAGGAAGAGATTTCGCGACCAGTTCGACGACTCGCTCGCCGACTCGGCCGAGTCGAAGCTCAGGCCACTCAACTCAACGGAGTCGAACGATTCGAGAATCGATTTACCGGAGCCGGAGGAGTTGCTCAGCATCCTCGAAGATGAGAGTCTTCAAGGTCTTGAACTCGATTCGTTCATCAGAAGCTTCGAGGCGGAGATGGAGGCTCCACCGCCGGCGGATCAGAATGAGAGTCCTCAACCGGAACTCGGATATCTATTCGAGGCGTCGGATCATGAACTCGGCCTGCCGCCGACGCTAGGTTCAGTTCCGGTGGACGCGATTGATTTTACGACGGGGATTTCTTCGCCTGGTTTGTTCGATTTGGACGGGAATCTAGGGTTTGGGGATGAGATACCGTGTTATGACTCGTTCGAGATCGGAACCGGCATTGGCTCCGGCGCGGCGGAGGAGTTTGTTGCGTTGGGCGGTTTGTTTGATTACTCGGACGTGCCGTTTCGGCCGGAGTCGTTGTCGGCTTCGTAGGGTTGCTTTCGACGTGTGTTGGTGTGGGACCCGACGTCGTTTTAAGCATGTAGGGTTGTTGTGTACATCTTTGAAGGACAAACACTGATCTCAGAATAGAAATTCAGAATTTCCTAATCAAACAAAAAGCCAATGTAGAGACTTACTTTTATTACGTTTTTTTAAATGTTTAATTTGCTTTTTTTCTTTTCTATTTTTTTTGGCTAAAAAATGATAATTTGAGATTAACTATTTTGATAGGCAACCTATCGCTTTCTTTCTCAAAACTACGACTATTTCTTTTGCTCGGGTATTTAATCGGA

Coding sequence (CDS)

ATGGAAAATCTCACCGACAGGAAGAGATTTCGCGACCAGTTCGACGACTCGCTCGCCGACTCGGCCGAGTCGAAGCTCAGGCCACTCAACTCAACGGAGTCGAACGATTCGAGAATCGATTTACCGGAGCCGGAGGAGTTGCTCAGCATCCTCGAAGATGAGAGTCTTCAAGGTCTTGAACTCGATTCGTTCATCAGAAGCTTCGAGGCGGAGATGGAGGCTCCACCGCCGGCGGATCAGAATGAGAGTCCTCAACCGGAACTCGGATATCTATTCGAGGCGTCGGATCATGAACTCGGCCTGCCGCCGACGCTAGGTTCAGTTCCGGTGGACGCGATTGATTTTACGACGGGGATTTCTTCGCCTGGTTTGTTCGATTTGGACGGGAATCTAGGGTTTGGGGATGAGATACCGTGTTATGACTCGTTCGAGATCGGAACCGGCATTGGCTCCGGCGCGGCGGAGGAGTTTGTTGCGTTGGGCGGTTTGTTTGATTACTCGGACGTGCCGTTTCGGCCGGAGTCGTTGTCGGCTTCGTAG

Protein sequence

MENLTDRKRFRDQFDDSLADSAESKLRPLNSTESNDSRIDLPEPEELLSILEDESLQGLELDSFIRSFEAEMEAPPPADQNESPQPELGYLFEASDHELGLPPTLGSVPVDAIDFTTGISSPGLFDLDGNLGFGDEIPCYDSFEIGTGIGSGAAEEFVALGGLFDYSDVPFRPESLSAS

Homology

[Close]

BLAST of Sed0025828 vs. NCBI nr
Match: XP_023541956.1 (uncharacterized protein LOC111801944 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 225.3 bits (573), Expect = 4.1e-55
Identity = 139/220 (63.18%), Postives = 155/220 (70.45%), Query Frame = 0


Query: 1   MENLTD-RKRFRDQFDDSLADSAESKLRPLNSTES----------------NDSRIDLPE 60
           MEN TD RKR RD+ D SLADSAESKLR L+STES                +D RIDL +
Sbjct: 1   MENCTDNRKRDRDELDVSLADSAESKLRRLDSTESRFVKPCSKSEPVGSDGDDLRIDLAD 60

Query: 61  PEE----LLSILE--------DESLQGLELDSFIRSFEAEMEAPPPA----DQNESPQPE 120
            +E    LL+ILE        DES+QG ELDSFIRSFE E+ A PPA    DQNE+PQ E
Sbjct: 61  SDEIQDKLLNILEDSDVVAERDESIQGFELDSFIRSFEEEIHALPPAETLSDQNETPQAE 120

Query: 121 LGYLFEASDHELGLPPTLGSV---PVDAIDFTTGISSPGLFDLDGNLGFGDEIPCYDSFE 179
           LGYLFEASD ELGLPPT+GS     ++AIDFT   S PG+F++DGN+GF DEIPCYDSFE
Sbjct: 121 LGYLFEASDDELGLPPTVGSSNEGKIEAIDFTPACSWPGVFEMDGNVGFEDEIPCYDSFE 180

[Close]

BLAST of Sed0025828 vs. NCBI nr
Match: XP_022954576.1 (uncharacterized protein LOC111456805 [Cucurbita moschata])

HSP 1 Score: 224.9 bits (572), Expect = 5.4e-55
Identity = 139/220 (63.18%), Postives = 154/220 (70.00%), Query Frame = 0


Query: 1   MENLTD-RKRFRDQFDDSLADSAESKLRPLNSTES----------------NDSRIDLPE 60
           MEN TD RKR RD+ D SLADSAESKLR LNS ES                 D RIDL +
Sbjct: 1   MENCTDNRKRDRDELDVSLADSAESKLRRLNSMESRFVKPCSKSEQVGSDGGDLRIDLAD 60

Query: 61  PEE----LLSILE--------DESLQGLELDSFIRSFEAEMEAPPPAD----QNESPQPE 120
            +E    LL+ILE        DES+QG ELDSFIRSFE E+ A PPA+    QNE+PQ E
Sbjct: 61  SDEIQDKLLNILEDSDVVAERDESIQGFELDSFIRSFEEEIHALPPAETSSNQNETPQAE 120

Query: 121 LGYLFEASDHELGLPPTLGSV---PVDAIDFTTGISSPGLFDLDGNLGFGDEIPCYDSFE 179
           LGYLFEASD ELGLPPT+GS     ++AIDFT   S PG+F++DGN+GF DEIPCYDSFE
Sbjct: 121 LGYLFEASDDELGLPPTVGSSNEGKIEAIDFTPACSWPGVFEMDGNVGFEDEIPCYDSFE 180

[Close]

BLAST of Sed0025828 vs. NCBI nr
Match: XP_022994085.1 (uncharacterized protein LOC111489916 [Cucurbita maxima])

HSP 1 Score: 223.4 bits (568), Expect = 1.6e-54
Identity = 138/220 (62.73%), Postives = 154/220 (70.00%), Query Frame = 0


Query: 1   MENLTD-RKRFRDQFDDSLADSAESKLRPLNSTES----------------NDSRIDLPE 60
           MEN TD RKR RD+ D SLADSAESKLR LN TES                +D RIDL +
Sbjct: 1   MENCTDNRKRDRDKLDVSLADSAESKLRRLNPTESRFVKPCSKSEQVGSDGDDLRIDLAD 60

Query: 61  PEE----LLSILE--------DESLQGLELDSFIRSFEAEMEAPPPAD----QNESPQPE 120
            +E    LL+ILE        DE +QG ELDSFIRSFE E+ A PPA+    QNE+PQ E
Sbjct: 61  SDEIHDKLLNILEDSDVVAERDECIQGFELDSFIRSFEEEIHALPPAETSSNQNETPQAE 120

Query: 121 LGYLFEASDHELGLPPTLGSV---PVDAIDFTTGISSPGLFDLDGNLGFGDEIPCYDSFE 179
           LGYLFEASD ELGLPPT+GS     ++AIDFT   S PG+F++DGN+GF DEIPCYDSFE
Sbjct: 121 LGYLFEASDDELGLPPTVGSSNEGTIEAIDFTPACSWPGVFEMDGNVGFEDEIPCYDSFE 180

[Close]

BLAST of Sed0025828 vs. NCBI nr
Match: KAG6572935.1 (hypothetical protein SDJN03_26822, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 222.2 bits (565), Expect = 3.5e-54
Identity = 138/220 (62.73%), Postives = 153/220 (69.55%), Query Frame = 0


Query: 1   MENLTD-RKRFRDQFDDSLADSAESKLRPLNSTES----------------NDSRIDLPE 60
           MEN TD RKR RD+ D SLADSA SKLR LNS ES                 D RIDL +
Sbjct: 1   MENCTDNRKRDRDELDVSLADSAGSKLRRLNSMESRFVKPCSKSEQVGSDGGDLRIDLAD 60

Query: 61  PEE----LLSILE--------DESLQGLELDSFIRSFEAEMEAPPPAD----QNESPQPE 120
            +E    LL+ILE        DES+QG ELDSFIRSFE E+ A PPA+    QNE+PQ E
Sbjct: 61  SDEIQDKLLNILEDCDVVAERDESIQGFELDSFIRSFEEEIHALPPAETSSNQNETPQAE 120

Query: 121 LGYLFEASDHELGLPPTLGSV---PVDAIDFTTGISSPGLFDLDGNLGFGDEIPCYDSFE 179
           LGYLFEASD ELGLPPT+GS     ++AIDFT   S PG+F++DGN+GF DEIPCYDSFE
Sbjct: 121 LGYLFEASDDELGLPPTVGSSNEGKIEAIDFTPACSWPGVFEMDGNVGFEDEIPCYDSFE 180

[Close]

BLAST of Sed0025828 vs. NCBI nr
Match: XP_038894861.1 (uncharacterized protein LOC120083261 [Benincasa hispida])

HSP 1 Score: 218.4 bits (555), Expect = 5.0e-53
Identity = 132/208 (63.46%), Postives = 151/208 (72.60%), Query Frame = 0


Query: 1   MENLT-DRKRFRDQFDDSLADSAESKLRPLNSTE-----SNDSRI-DLPEPE----ELLS 60
           MEN + D+KR RD+FDDSLADSAESKLR LNS E     + D  I DL E E    ELL+
Sbjct: 1   MENYSQDKKRVRDEFDDSLADSAESKLRRLNSKENLNVAAGDLNIDDLVESEEIQDELLN 60

Query: 61  ILE--------DESLQGLELDSFIRSFEAEMEAPPPADQNESPQPELGYLFEASDHELGL 120
           ILE        DES++GLELDSFI+SFE E++A P ADQNE+PQ ELGYLF ASD ELGL
Sbjct: 61  ILEDSDAVAERDESIEGLELDSFIKSFEEEIQALPSADQNETPQAELGYLFGASDDELGL 120

Query: 121 PPTLGSV----PVDAIDFTTGISSPGLFDLDGNLGFGDEIPCYDSFEIGTGIGSGAAE-- 179
           PP+ G +     ++A DF     SP +F+L+G LGFGDEIPCYDSFE+G GIGSGAAE  
Sbjct: 121 PPSRGGLSTEGKMEATDFMPACCSPDVFELEGKLGFGDEIPCYDSFELGMGIGSGAAEEN 180

[Close]

BLAST of Sed0025828 vs. ExPASy TrEMBL
Match: A0A6J1GR95 (uncharacterized protein LOC111456805 OS=Cucurbita moschata OX=3662 GN=LOC111456805 PE=4 SV=1)

HSP 1 Score: 224.9 bits (572), Expect = 2.6e-55
Identity = 139/220 (63.18%), Postives = 154/220 (70.00%), Query Frame = 0


Query: 1   MENLTD-RKRFRDQFDDSLADSAESKLRPLNSTES----------------NDSRIDLPE 60
           MEN TD RKR RD+ D SLADSAESKLR LNS ES                 D RIDL +
Sbjct: 1   MENCTDNRKRDRDELDVSLADSAESKLRRLNSMESRFVKPCSKSEQVGSDGGDLRIDLAD 60

Query: 61  PEE----LLSILE--------DESLQGLELDSFIRSFEAEMEAPPPAD----QNESPQPE 120
            +E    LL+ILE        DES+QG ELDSFIRSFE E+ A PPA+    QNE+PQ E
Sbjct: 61  SDEIQDKLLNILEDSDVVAERDESIQGFELDSFIRSFEEEIHALPPAETSSNQNETPQAE 120

Query: 121 LGYLFEASDHELGLPPTLGSV---PVDAIDFTTGISSPGLFDLDGNLGFGDEIPCYDSFE 179
           LGYLFEASD ELGLPPT+GS     ++AIDFT   S PG+F++DGN+GF DEIPCYDSFE
Sbjct: 121 LGYLFEASDDELGLPPTVGSSNEGKIEAIDFTPACSWPGVFEMDGNVGFEDEIPCYDSFE 180

[Close]

BLAST of Sed0025828 vs. ExPASy TrEMBL
Match: A0A6J1K097 (uncharacterized protein LOC111489916 OS=Cucurbita maxima OX=3661 GN=LOC111489916 PE=4 SV=1)

HSP 1 Score: 223.4 bits (568), Expect = 7.6e-55
Identity = 138/220 (62.73%), Postives = 154/220 (70.00%), Query Frame = 0


Query: 1   MENLTD-RKRFRDQFDDSLADSAESKLRPLNSTES----------------NDSRIDLPE 60
           MEN TD RKR RD+ D SLADSAESKLR LN TES                +D RIDL +
Sbjct: 1   MENCTDNRKRDRDKLDVSLADSAESKLRRLNPTESRFVKPCSKSEQVGSDGDDLRIDLAD 60

Query: 61  PEE----LLSILE--------DESLQGLELDSFIRSFEAEMEAPPPAD----QNESPQPE 120
            +E    LL+ILE        DE +QG ELDSFIRSFE E+ A PPA+    QNE+PQ E
Sbjct: 61  SDEIHDKLLNILEDSDVVAERDECIQGFELDSFIRSFEEEIHALPPAETSSNQNETPQAE 120

Query: 121 LGYLFEASDHELGLPPTLGSV---PVDAIDFTTGISSPGLFDLDGNLGFGDEIPCYDSFE 179
           LGYLFEASD ELGLPPT+GS     ++AIDFT   S PG+F++DGN+GF DEIPCYDSFE
Sbjct: 121 LGYLFEASDDELGLPPTVGSSNEGTIEAIDFTPACSWPGVFEMDGNVGFEDEIPCYDSFE 180

[Close]

BLAST of Sed0025828 vs. ExPASy TrEMBL
Match: A0A6J1E811 (uncharacterized protein LOC111431577 OS=Cucurbita moschata OX=3662 GN=LOC111431577 PE=4 SV=1)

HSP 1 Score: 195.3 bits (495), Expect = 2.2e-46
Identity = 130/226 (57.52%), Postives = 147/226 (65.04%), Query Frame = 0


Query: 1   MENLTD-RKRFRDQFDDSLADSAESKLRPLNS---------TESN-----------DSRI 60
           MEN TD +KR   +FDDSLADSAESKLR L+S         TE N           D  I
Sbjct: 1   MENCTDNKKRLLSEFDDSLADSAESKLRRLDSSDFSSLNPCTEGNWNVVQDLESVADFTI 60

Query: 61  DLPE----PEELLSILE--------DESLQGLELDSFIRSFEAEMEAPP----PADQNES 120
           +L E     ++LL+ILE        DES++GLELDSFIRSFE E++A P    P+ QNE+
Sbjct: 61  NLSESHDIQDDLLNILEDSDVVLERDESIEGLELDSFIRSFEEEIQALPSVKTPSHQNET 120

Query: 121 PQPELGYLFEASDHELGLPPTLG----SVPVDAIDFTTGISS-PGLFDLDGNLGFGDEIP 179
           PQ ELGYL+ ASD ELGLPPT G        +AIDF    SS PG+F+LDGN GF DEIP
Sbjct: 121 PQVELGYLYGASDDELGLPPTGGLSTDGKRTEAIDFMPASSSPPGVFELDGNAGFEDEIP 180

[Close]

BLAST of Sed0025828 vs. ExPASy TrEMBL
Match: A0A0A0LQD5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G042270 PE=4 SV=1)

HSP 1 Score: 169.5 bits (428), Expect = 1.3e-38
Identity = 120/238 (50.42%), Postives = 144/238 (60.50%), Query Frame = 0


Query: 1   MENLT-DRKRFRDQF-DDSLADSAESKLRPLNSTE---------------------SNDS 60
           M+N + DRKR  D+  DDSLADSAESKLR LNS++                     + D 
Sbjct: 1   MDNFSEDRKRVHDELDDDSLADSAESKLRRLNSSDLRIGKPCTKEDFNVVQGSSAIAGDL 60

Query: 61  RI-DLPEPEE-----LLSILED---------ESLQGLELDSFIRSFEAEMEAPPPA---- 120
            I DL E EE     LL+ILED          +++GLELDSFI+SFE E++  P +    
Sbjct: 61  NIDDLVESEEIQDELLLNILEDSDVVAERDESAIEGLELDSFIKSFEEEIQGVPSSVDDQ 120

Query: 121 -DQNESPQPELGYLFEASDHELGLPPTLG------SVPVDAIDFTTGIS--SPGLFDLDG 179
            + NE+PQ ELGYLF ASD ELGLPP+ G         ++AIDF    S  SP +F+L+G
Sbjct: 121 NNNNETPQAELGYLFGASDDELGLPPSGGLSSTTEGKKMEAIDFMPPASSCSPDVFELEG 180

[Close]

BLAST of Sed0025828 vs. ExPASy TrEMBL
Match: A0A2N9EEW7 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS1167 PE=4 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 2.0e-23
Identity = 92/214 (42.99%), Postives = 116/214 (54.21%), Query Frame = 0


Query: 1   MENLTDRKRFRDQFDDSLADSAESKLRPLNST----------ESNDSRIDLPE----PEE 60
           ME  TD KR R+Q DDS  +S E K    +S           +SN+S ++ PE     E+
Sbjct: 1   MEKCTDNKRKREQ-DDSGINSPEPKRIRFDSDDLAESTLLRFDSNNSELNSPEVHRIQED 60

Query: 61  LLSILEDE-------SLQGLELDSFIRSFEAEMEAPPP--------ADQNESPQPELGYL 120
           LL+IL+D        ++QG  LDS I+SFE E++   P        +D  ES QPELGYL
Sbjct: 61  LLNILDDSDVTDRDPAIQG--LDSVIKSFEEEIQVQDPLPAVFDLTSDSGES-QPELGYL 120

Query: 121 FEASDHELGLPPTLGS---VPVDAIDFTTGISSPGLFDLDGNLGFGDEIPCYDSFEIGTG 178
            EASD ELGLPPT  S     ++A++F    S P    LDG LGF +E+P YD F  G G
Sbjct: 121 LEASDDELGLPPTSSSGEETKIEAVEFEASSSYPNPVGLDGILGFENEMPSYDLFGFGIG 180

[Close]

BLAST of Sed0025828 vs. TAIR 10
Match: AT1G13360.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G25870.1); Has 69 Blast hits to 69 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 0; Plants - 63; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 74.3 bits (181), Expect = 1.1e-13
Identity = 67/198 (33.84%), Postives = 98/198 (49.49%), Query Frame = 0


Query: 6   DRKRFRDQ-FDDSLADSAESK-LRPLNSTESNDSRIDLPEPEELLSILEDESLQGL--EL 65
           ++KR RD+ FD+++ DS E K LR                 ++L  +L+D   + +  +L
Sbjct: 15  EKKRVRDESFDEAVLDSPEVKRLR-----------------DDLFDVLDDSDPEPVSQDL 74

Query: 66  DSFIRSFEAEMEAPPPADQNES-----PQPELGYLFEASDHELGL--PPTLGSVPVDAID 125
           DS ++SFE E+          S      QP+LGYL EASD ELGL  PP++  VPV   +
Sbjct: 75  DSVMKSFEDELSTVTTTTAQGSSTAGETQPDLGYLLEASDDELGLPPPPSISPVPVAKEE 134

Query: 126 FTTGI------SSPGLFDLDGNLGFGDEIPCYDSFEIGTGIGSGAAEEFVALGGLFDYSD 179
            TT        +S     +D   GF D +  Y   + G+G+G G   ++VA+ GLF++SD
Sbjct: 135 VTTETVTDLVRASSDSSGIDEIWGFEDHVSNYGGLDFGSGVGDGG--DYVAVEGLFEFSD 193

[Close]

BLAST of Sed0025828 vs. TAIR 10
Match: AT1G13360.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G25870.1). )

HSP 1 Score: 68.2 bits (165), Expect = 7.8e-12
Identity = 59/179 (32.96%), Postives = 89/179 (49.72%), Query Frame = 0


Query: 6   DRKRFRDQ-FDDSLADSAESK-LRPLNSTESNDSRIDLPEPEELLSILEDESLQGL--EL 65
           ++KR RD+ FD+++ DS E K LR                 ++L  +L+D   + +  +L
Sbjct: 15  EKKRVRDESFDEAVLDSPEVKRLR-----------------DDLFDVLDDSDPEPVSQDL 74

Query: 66  DSFIRSFEAEMEAPPPADQNES-----PQPELGYLFEASDHELGL--PPTLGSVPVDAID 125
           DS ++SFE E+          S      QP+LGYL EASD ELGL  PP++  VPV   +
Sbjct: 75  DSVMKSFEDELSTVTTTTAQGSSTAGETQPDLGYLLEASDDELGLPPPPSISPVPVAKEE 134

Query: 126 FTTGI------SSPGLFDLDGNLGFGDEIPCYDSFEIGTGIGSGAAEEFVALGGLFDYS 168
            TT        +S     +D   GF D +  Y   + G+G+G G   ++VA+ G F Y+
Sbjct: 135 VTTETVTDLVRASSDSSGIDEIWGFEDHVSNYGGLDFGSGVGDGG--DYVAVEGFFYYT 174

[Close]

BLAST of Sed0025828 vs. TAIR 10
Match: AT1G13360.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G25870.1). )

HSP 1 Score: 65.5 bits (158), Expect = 5.1e-11
Identity = 58/175 (33.14%), Postives = 87/175 (49.71%), Query Frame = 0


Query: 6   DRKRFRDQ-FDDSLADSAESK-LRPLNSTESNDSRIDLPEPEELLSILEDESLQGL--EL 65
           ++KR RD+ FD+++ DS E K LR                 ++L  +L+D   + +  +L
Sbjct: 15  EKKRVRDESFDEAVLDSPEVKRLR-----------------DDLFDVLDDSDPEPVSQDL 74

Query: 66  DSFIRSFEAEMEAPPPADQNES-----PQPELGYLFEASDHELGL--PPTLGSVPVDAID 125
           DS ++SFE E+          S      QP+LGYL EASD ELGL  PP++  VPV   +
Sbjct: 75  DSVMKSFEDELSTVTTTTAQGSSTAGETQPDLGYLLEASDDELGLPPPPSISPVPVAKEE 134

Query: 126 FTTGI------SSPGLFDLDGNLGFGDEIPCYDSFEIGTGIGSGAAEEFVALGGL 164
            TT        +S     +D   GF D +  Y   + G+G+G G   ++VA+ GL
Sbjct: 135 VTTETVTDLVRASSDSSGIDEIWGFEDHVSNYGGLDFGSGVGDGG--DYVAVEGL 170

[Close]

BLAST of Sed0025828 vs. TAIR 10
Match: AT3G25870.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G13360.1); Has 50 Blast hits to 50 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 52.8 bits (125), Expect = 3.4e-07
Identity = 57/177 (32.20%), Postives = 83/177 (46.89%), Query Frame = 0


Query: 18  LADSAESKLRPLNSTESNDSR----IDLPEPEELLSILEDESLQGL-----ELDSFIRSF 77
           + D  E +L   +S  +   R    +D P+ + L   L D+S  GL     +LDS ++SF
Sbjct: 1   MEDLLEERLTRTDSVGNKRVRDGLDLDSPDVKRLRDDLFDDS--GLDPVSQDLDSVMKSF 60

Query: 78  EAEMEAPPPADQNESPQPELGYLFEASDHELGLPPTLGS----VPVDAIDFTTGI--SSP 137
           E E+     A  +   QP+LGYLFEASD ELGLPP L      +P    +  T +  +S 
Sbjct: 61  ENELSTTTAALSSGETQPDLGYLFEASDDELGLPPPLTPPQTLLPPSCEETVTELVRASS 120

Query: 138 GLFDLDGNLGFGDEIPCYDSFEIGTGIGSGAAEEFVALGGLFDYSDV-PFRPESLSA 179
              ++    GF D +  +   ++G     G  E F    G  D  D+  +RPE L A
Sbjct: 121 DSSEVGELCGFEDHVTEFGPCDLG---DDGLFEYF---DGCLDSGDLFSWRPEFLPA 169

The following BLAST results are available for this feature:

BLAST of Sed0025828 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023541956.1	4.1e-55	63.18	uncharacterized protein LOC111801944 [Cucurbita pepo subsp. pepo]	[more]
XP_022954576.1	5.4e-55	63.18	uncharacterized protein LOC111456805 [Cucurbita moschata]	[more]
XP_022994085.1	1.6e-54	62.73	uncharacterized protein LOC111489916 [Cucurbita maxima]	[more]
KAG6572935.1	3.5e-54	62.73	hypothetical protein SDJN03_26822, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_038894861.1	5.0e-53	63.46	uncharacterized protein LOC120083261 [Benincasa hispida]	[more]

BLAST of Sed0025828 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0025828 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GR95	2.6e-55	63.18	uncharacterized protein LOC111456805 OS=Cucurbita moschata OX=3662 GN=LOC1114568...	[more]
A0A6J1K097	7.6e-55	62.73	uncharacterized protein LOC111489916 OS=Cucurbita maxima OX=3661 GN=LOC111489916...	[more]
A0A6J1E811	2.2e-46	57.52	uncharacterized protein LOC111431577 OS=Cucurbita moschata OX=3662 GN=LOC1114315...	[more]
A0A0A0LQD5	1.3e-38	50.42	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G042270 PE=4 SV=1	[more]
A0A2N9EEW7	2.0e-23	42.99	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS1167 PE=4 SV=1	[more]

BLAST of Sed0025828 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G13360.1	1.1e-13	33.84	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G13360.2	7.8e-12	32.96	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G13360.3	5.1e-11	33.14	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G25870.1	3.4e-07	32.20	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..44
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 68..91
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..22
None	No IPR available	PANTHER	PTHR34539	T6J4.11 PROTEIN	coord: 3..178
None	No IPR available	PANTHER	PTHR34539:SF15	SUBFAMILY NOT NAMED	coord: 3..178

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0025828.1	Sed0025828.1	mRNA