Homology
BLAST of Sed0025706 vs. NCBI nr
Match:
KAG7022692.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 1154.8 bits (2986), Expect = 0.0e+00
Identity = 589/715 (82.38%), Postives = 631/715 (88.25%), Query Frame = 0
Query: 3 MHVLSIWCPISSSCLELGSYSVVNALRKRINCVGFSEFRCGNGNFSVISFNLSVLRSGFC 62
M +LS WCP SSS LELGSYSVVN RKRINCV FS CGNG F++I F+ SVLR GFC
Sbjct: 1 MSILSDWCP-SSSGLELGSYSVVNGSRKRINCVRFSGC-CGNGGFALIPFSSSVLRCGFC 60
Query: 63 YEDSKID-----------------FKLKR-KIGDWVLSALAVEQSTIDGEIVRVESKSGD 122
YE+SK D K KR +G W LSA AVEQ TIDGEIVRV+S SGD
Sbjct: 61 YENSKFDCNFEFRHGCSKLRVARLMKPKRNSLGVWFLSAWAVEQPTIDGEIVRVQSNSGD 120
Query: 123 DLPKRSLDWDCDDYDNGNGENS---------------QGDVRVDVRALAARLELARTADD 182
D P++SLDWD D+D+ NGENS +GDV+VDVRALA RLELART DD
Sbjct: 121 DFPEKSLDWDEHDHDSVNGENSSGRSFKDEEGIEGEGEGDVKVDVRALAGRLELARTVDD 180
Query: 183 VEDVLEDVGELPLQVFSSIIRGFGRDKRLECAMALVEWLKRKKIETNGRISPNLFIYNSL 242
VE+VL+DVGELPLQVFSS+I+GFGRDKRL CAMALVEWLK +KIETNGRI+PNLFIYNSL
Sbjct: 181 VEEVLKDVGELPLQVFSSLIKGFGRDKRLGCAMALVEWLKTRKIETNGRIAPNLFIYNSL 240
Query: 243 LGAVKQSGEISKLEDVLNDMEQQGIVSNVVTYNTIMSIYLEKGLAVKALGILEEMPKKGL 302
LGAVKQSGE SK+ED+LNDM Q+GIVSNVVTYNTIMSIYL++GL +KAL ILEEMPKKGL
Sbjct: 241 LGAVKQSGEFSKMEDILNDMSQEGIVSNVVTYNTIMSIYLDQGLPMKALDILEEMPKKGL 300
Query: 303 TLSPVSYSTALRAYRRMKDGNGALKFMVELRERYRNGEIAKDDNVDWADEFLKLENFTRR 362
TLSPVSYSTALRAYRRMKDGN ALKFMVELRERYRNGEIAKDDNVDW DEFLKLENFTRR
Sbjct: 301 TLSPVSYSTALRAYRRMKDGNSALKFMVELRERYRNGEIAKDDNVDWDDEFLKLENFTRR 360
Query: 363 VCYQVMRIWLVKGDSASTKVLQLLTEMDKAELSLDRAEEERLIWACTCAEHHNVAKELYY 422
VCYQVMRIWLVKGDSASTKVLQLLTEMDKA LSLDRAEEERL+WACTCAEHHNVAKELYY
Sbjct: 361 VCYQVMRIWLVKGDSASTKVLQLLTEMDKAGLSLDRAEEERLVWACTCAEHHNVAKELYY 420
Query: 423 RIREKQSGISLSVCNHVIWLLGKAKKWWAALEIYEDLLEKGPKPNNMSYELIVSHFNVLL 482
RIREK+SGISLSVCNHVIWL+GKAKKWWAALEIYEDLLEKGPKPNN+SYELIVSHFNVLL
Sbjct: 421 RIREKKSGISLSVCNHVIWLMGKAKKWWAALEIYEDLLEKGPKPNNLSYELIVSHFNVLL 480
Query: 483 TAAKKRGIWKWGVRLLNKMEEKGLKPGSREWNAVLVACSKAAETSAAIEVFKRMVEQGEK 542
TAAK RGIW+WGVRLLNKMEEKGLKPG REWNAVLVACSKAAETS AIE+F+RM++QGEK
Sbjct: 481 TAAKNRGIWRWGVRLLNKMEEKGLKPGIREWNAVLVACSKAAETSMAIEIFRRMIDQGEK 540
Query: 543 PTVLSYGALLSALEKGKLYDEARSVWDHMIKVGVKPNIYAYTTMASVFTGQGKFNMVEIT 602
PTVLSYGALLSALEKGKLYDEARSVWDHMIKVGV PNIYAYTTMASVFTGQGKFNMVE+T
Sbjct: 541 PTVLSYGALLSALEKGKLYDEARSVWDHMIKVGVAPNIYAYTTMASVFTGQGKFNMVELT 600
Query: 603 LNDMVASGIEPTVVTYNAIITGCVRNDMSSVAYEWFHRIKVRSISPNEVSYELLIEALAK 662
+NDMVASGIEPTVVTYNAIITGCVRN MSSVAYEWFHR+KVR+ISPNEVSYELLIEALAK
Sbjct: 601 INDMVASGIEPTVVTYNAIITGCVRNGMSSVAYEWFHRMKVRNISPNEVSYELLIEALAK 660
Query: 663 EGKPRLAYELYMRAKNDGLILSSKIYDAVIESSQVYGADIDIRSLGPRPPDKKSS 685
+GKPRLAYELYM+A N+GL LSSKIYDAVI SSQVYGA IDI LGPRPPD+ S
Sbjct: 661 DGKPRLAYELYMKANNEGLNLSSKIYDAVIHSSQVYGASIDISLLGPRPPDENKS 713
BLAST of Sed0025706 vs. NCBI nr
Match:
XP_022928295.1 (pentatricopeptide repeat-containing protein At3g46610-like [Cucurbita moschata])
HSP 1 Score: 1152.1 bits (2979), Expect = 0.0e+00
Identity = 588/715 (82.24%), Postives = 631/715 (88.25%), Query Frame = 0
Query: 3 MHVLSIWCPISSSCLELGSYSVVNALRKRINCVGFSEFRCGNGNFSVISFNLSVLRSGFC 62
M +LS WCP SSS LELGSYSVVN RKRINCV FS CGNG F++I F+ SVLR GFC
Sbjct: 1 MSILSDWCP-SSSGLELGSYSVVNGSRKRINCVRFSGC-CGNGGFALIPFSSSVLRCGFC 60
Query: 63 YEDSKID-----------------FKLKR-KIGDWVLSALAVEQSTIDGEIVRVESKSGD 122
YE+SK D K KR +G W LSA AVEQ TIDGEIVRV+S SGD
Sbjct: 61 YENSKFDCNFEFRHGCSKLRVARLMKPKRNSLGVWFLSAWAVEQPTIDGEIVRVQSNSGD 120
Query: 123 DLPKRSLDWDCDDYDNGNGENS---------------QGDVRVDVRALAARLELARTADD 182
D P++SLDWD D D+ NGENS +GDV+VDVRALA RLELART DD
Sbjct: 121 DFPEKSLDWDEHDQDSVNGENSSGRSFKDEEGIEGEGEGDVKVDVRALAGRLELARTVDD 180
Query: 183 VEDVLEDVGELPLQVFSSIIRGFGRDKRLECAMALVEWLKRKKIETNGRISPNLFIYNSL 242
VE+VL+DVGELPLQVFSS+I+GFGRDKRL CAMALVEWLK +KIETNGRI+PNLFIYNSL
Sbjct: 181 VEEVLKDVGELPLQVFSSLIKGFGRDKRLGCAMALVEWLKTRKIETNGRIAPNLFIYNSL 240
Query: 243 LGAVKQSGEISKLEDVLNDMEQQGIVSNVVTYNTIMSIYLEKGLAVKALGILEEMPKKGL 302
LGAVKQSGE SK+ED+LNDM Q+GIVSNVVTYNTIMSIYL++GL +KAL ILEEMPKKGL
Sbjct: 241 LGAVKQSGEFSKMEDILNDMSQEGIVSNVVTYNTIMSIYLDQGLPMKALDILEEMPKKGL 300
Query: 303 TLSPVSYSTALRAYRRMKDGNGALKFMVELRERYRNGEIAKDDNVDWADEFLKLENFTRR 362
TLSPVSYSTALRAYRRMKDGNGALKFMVELRERYRNGEIAKDDNVDW DEFLKLENFTRR
Sbjct: 301 TLSPVSYSTALRAYRRMKDGNGALKFMVELRERYRNGEIAKDDNVDWDDEFLKLENFTRR 360
Query: 363 VCYQVMRIWLVKGDSASTKVLQLLTEMDKAELSLDRAEEERLIWACTCAEHHNVAKELYY 422
VCYQVMRIWLVKGDSASTKVLQLLTEMDKA LSLDRAEEERL+WACTCAEHHNVAKELYY
Sbjct: 361 VCYQVMRIWLVKGDSASTKVLQLLTEMDKAGLSLDRAEEERLVWACTCAEHHNVAKELYY 420
Query: 423 RIREKQSGISLSVCNHVIWLLGKAKKWWAALEIYEDLLEKGPKPNNMSYELIVSHFNVLL 482
RIREK+SGISLSVCNHVIWL+GKAKKWWAALEIYEDLLEKGPKPNN+SYELIVSHFNVLL
Sbjct: 421 RIREKKSGISLSVCNHVIWLMGKAKKWWAALEIYEDLLEKGPKPNNLSYELIVSHFNVLL 480
Query: 483 TAAKKRGIWKWGVRLLNKMEEKGLKPGSREWNAVLVACSKAAETSAAIEVFKRMVEQGEK 542
TAAK RGIW+WGVRLLNKMEEKGLKPG REWNAVLVACSKAA+TS AIE+F+RM++QGEK
Sbjct: 481 TAAKNRGIWRWGVRLLNKMEEKGLKPGIREWNAVLVACSKAAKTSMAIEIFRRMIDQGEK 540
Query: 543 PTVLSYGALLSALEKGKLYDEARSVWDHMIKVGVKPNIYAYTTMASVFTGQGKFNMVEIT 602
PTVLSYGALLSALEKGKLYDEARSVWDHMIKVGV PNIYAYTTMASVFTGQGKFNMVE+T
Sbjct: 541 PTVLSYGALLSALEKGKLYDEARSVWDHMIKVGVAPNIYAYTTMASVFTGQGKFNMVELT 600
Query: 603 LNDMVASGIEPTVVTYNAIITGCVRNDMSSVAYEWFHRIKVRSISPNEVSYELLIEALAK 662
+NDMVASGIEPTVVTYNAIITGCVRN MSSVAYEWFHR+KVR+ISPNEVSYELLIEALAK
Sbjct: 601 INDMVASGIEPTVVTYNAIITGCVRNGMSSVAYEWFHRMKVRNISPNEVSYELLIEALAK 660
Query: 663 EGKPRLAYELYMRAKNDGLILSSKIYDAVIESSQVYGADIDIRSLGPRPPDKKSS 685
+ KPRLAYELYM+AK++GL LSSKIYDAVI SSQVYGA IDI LGPRPPD+ S
Sbjct: 661 DSKPRLAYELYMKAKSEGLNLSSKIYDAVIHSSQVYGASIDISLLGPRPPDENKS 713
BLAST of Sed0025706 vs. NCBI nr
Match:
XP_022989603.1 (pentatricopeptide repeat-containing protein At3g46610-like [Cucurbita maxima])
HSP 1 Score: 1151.3 bits (2977), Expect = 0.0e+00
Identity = 587/713 (82.33%), Postives = 629/713 (88.22%), Query Frame = 0
Query: 3 MHVLSIWCPISSSCLELGSYSVVNALRKRINCVGFSEFRCGNGNFSVISFNLSVLRSGFC 62
M +LS WCP SSS LELG SVVN RKRINCVGFS CGNG FS+I F+ SVLR GFC
Sbjct: 1 MSILSDWCP-SSSGLELGCSSVVNGSRKRINCVGFSGC-CGNGGFSLIPFSSSVLRCGFC 60
Query: 63 YEDSKID-----------------FKLKR-KIGDWVLSALAVEQSTIDGEIVRVESKSGD 122
YE+SK D K KR +G W LSA AVEQ TIDGEIVRV+S GD
Sbjct: 61 YENSKFDCNFEFRHGCSKLRVARLMKPKRNSLGVWFLSAWAVEQPTIDGEIVRVQSNCGD 120
Query: 123 DLPKRSLDWDCDDYDNGNGENS-------------QGDVRVDVRALAARLELARTADDVE 182
D P++SLDWD D+D N ENS +GDV+VDVRALA RLELART DDVE
Sbjct: 121 DFPEKSLDWDDHDHDTVNSENSNGRSFKDEEGIEGEGDVKVDVRALAGRLELARTVDDVE 180
Query: 183 DVLEDVGELPLQVFSSIIRGFGRDKRLECAMALVEWLKRKKIETNGRISPNLFIYNSLLG 242
+VL+DVGELPLQVFSS+I+GFGRDKRL CA+ALVEWLK +KI+TNGRI+PNLFIYNSLLG
Sbjct: 181 EVLKDVGELPLQVFSSLIKGFGRDKRLGCALALVEWLKTRKIKTNGRIAPNLFIYNSLLG 240
Query: 243 AVKQSGEISKLEDVLNDMEQQGIVSNVVTYNTIMSIYLEKGLAVKALGILEEMPKKGLTL 302
AVKQSGE SK+ED+LNDM Q+GIVSNVVTYNTIMSIYL++GL +KAL ILEEMPKKGLTL
Sbjct: 241 AVKQSGEFSKMEDILNDMSQEGIVSNVVTYNTIMSIYLDQGLPMKALDILEEMPKKGLTL 300
Query: 303 SPVSYSTALRAYRRMKDGNGALKFMVELRERYRNGEIAKDDNVDWADEFLKLENFTRRVC 362
SPVSYSTALRAYRRMKDGNGALKFMVELRERYRNGEIAKDDNVDW DEFLKLENFTRRVC
Sbjct: 301 SPVSYSTALRAYRRMKDGNGALKFMVELRERYRNGEIAKDDNVDWDDEFLKLENFTRRVC 360
Query: 363 YQVMRIWLVKGDSASTKVLQLLTEMDKAELSLDRAEEERLIWACTCAEHHNVAKELYYRI 422
YQVMRIWLVKGDSASTKVLQLLTEMDKA LSLDRAEEERL+WACTCAEHHNVAKELYYRI
Sbjct: 361 YQVMRIWLVKGDSASTKVLQLLTEMDKAGLSLDRAEEERLVWACTCAEHHNVAKELYYRI 420
Query: 423 REKQSGISLSVCNHVIWLLGKAKKWWAALEIYEDLLEKGPKPNNMSYELIVSHFNVLLTA 482
REK+SGISLSVCNHVIWL+GKAKKWWAALEIYEDLLEKGPKPNN+SYELIVSHFNVLLTA
Sbjct: 421 REKKSGISLSVCNHVIWLMGKAKKWWAALEIYEDLLEKGPKPNNLSYELIVSHFNVLLTA 480
Query: 483 AKKRGIWKWGVRLLNKMEEKGLKPGSREWNAVLVACSKAAETSAAIEVFKRMVEQGEKPT 542
AK RGIW+WGVRLLNKMEEKGLKPG REWNAVLVACS+AAETS AIE+F+RMV+QGEKPT
Sbjct: 481 AKNRGIWRWGVRLLNKMEEKGLKPGIREWNAVLVACSRAAETSMAIEIFRRMVDQGEKPT 540
Query: 543 VLSYGALLSALEKGKLYDEARSVWDHMIKVGVKPNIYAYTTMASVFTGQGKFNMVEITLN 602
VLSYGALLSALEKGKLYDEARSVWDHMIKVGV PNIYAYTTMASVFTGQGKFNMVE+T+N
Sbjct: 541 VLSYGALLSALEKGKLYDEARSVWDHMIKVGVAPNIYAYTTMASVFTGQGKFNMVELTIN 600
Query: 603 DMVASGIEPTVVTYNAIITGCVRNDMSSVAYEWFHRIKVRSISPNEVSYELLIEALAKEG 662
DMVASGIEPTVVTYNAIITGCVRN MSSVAYEWFHR+KVR+ISPNEVSYELLIEALAK+G
Sbjct: 601 DMVASGIEPTVVTYNAIITGCVRNGMSSVAYEWFHRMKVRNISPNEVSYELLIEALAKDG 660
Query: 663 KPRLAYELYMRAKNDGLILSSKIYDAVIESSQVYGADIDIRSLGPRPPDKKSS 685
KPRLAYELYM+A N+GL LSSKIYDAVI SSQVYGA IDIR LGPRPPD+ S
Sbjct: 661 KPRLAYELYMKANNEGLNLSSKIYDAVIHSSQVYGASIDIRLLGPRPPDENKS 711
BLAST of Sed0025706 vs. NCBI nr
Match:
KAG6588925.1 (Protein LOW PHOTOSYNTHETIC EFFICIENCY 1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 1151.0 bits (2976), Expect = 0.0e+00
Identity = 587/712 (82.44%), Postives = 629/712 (88.34%), Query Frame = 0
Query: 3 MHVLSIWCPISSSCLELGSYSVVNALRKRINCVGFSEFRCGNGNFSVISFNLSVLRSGFC 62
M +LS WCP SSS LELGSYSVVN RKRINCV FS CGNG F++I F+ SVLR GFC
Sbjct: 1 MSILSDWCP-SSSGLELGSYSVVNGSRKRINCVRFSGC-CGNGGFALIPFSSSVLRCGFC 60
Query: 63 YEDSKID-----------------FKLKR-KIGDWVLSALAVEQSTIDGEIVRVESKSGD 122
YE+SK D K KR +G W LSA AVEQ TIDGEIVRV+S SGD
Sbjct: 61 YENSKFDCNFEFRHGCSKLRVARLMKPKRNSLGVWFLSAWAVEQPTIDGEIVRVQSNSGD 120
Query: 123 DLPKRSLDWDCDDYDNGNGENS---------------QGDVRVDVRALAARLELARTADD 182
D P++SLDWD D+D+ NGENS +GDV+VDVRALA RLELART DD
Sbjct: 121 DFPEKSLDWDEHDHDSVNGENSSGRSFKDEEGIEGEGEGDVKVDVRALAGRLELARTVDD 180
Query: 183 VEDVLEDVGELPLQVFSSIIRGFGRDKRLECAMALVEWLKRKKIETNGRISPNLFIYNSL 242
VE+VL+DVGELPLQVFSS+I+GFGRDKRL CAMALVEWLK +KIETNGRI+PNLFIYNSL
Sbjct: 181 VEEVLKDVGELPLQVFSSLIKGFGRDKRLGCAMALVEWLKTRKIETNGRIAPNLFIYNSL 240
Query: 243 LGAVKQSGEISKLEDVLNDMEQQGIVSNVVTYNTIMSIYLEKGLAVKALGILEEMPKKGL 302
LGAVKQSGE SK+ED+LNDM Q+GIVSNVVTYNTIMSIYL++GL +KAL ILEEMPKKGL
Sbjct: 241 LGAVKQSGEFSKMEDILNDMSQEGIVSNVVTYNTIMSIYLDQGLPMKALDILEEMPKKGL 300
Query: 303 TLSPVSYSTALRAYRRMKDGNGALKFMVELRERYRNGEIAKDDNVDWADEFLKLENFTRR 362
TLSPVSYSTALRAYRRMKDGN ALKFMVELRERYR GEIAKDDNVDW DEFLKLENFTRR
Sbjct: 301 TLSPVSYSTALRAYRRMKDGNSALKFMVELRERYRTGEIAKDDNVDWDDEFLKLENFTRR 360
Query: 363 VCYQVMRIWLVKGDSASTKVLQLLTEMDKAELSLDRAEEERLIWACTCAEHHNVAKELYY 422
VCYQVMRIWLVKGDSASTKVLQLLTEMDKA LSLDRAEEERL+WACTCAEHHNVAKELYY
Sbjct: 361 VCYQVMRIWLVKGDSASTKVLQLLTEMDKAGLSLDRAEEERLVWACTCAEHHNVAKELYY 420
Query: 423 RIREKQSGISLSVCNHVIWLLGKAKKWWAALEIYEDLLEKGPKPNNMSYELIVSHFNVLL 482
RIREK+SGISLSVCNHVIWL+GKAKKWWAALEIYEDLLEKGPKPNN+SYELIVSHFNVLL
Sbjct: 421 RIREKKSGISLSVCNHVIWLMGKAKKWWAALEIYEDLLEKGPKPNNLSYELIVSHFNVLL 480
Query: 483 TAAKKRGIWKWGVRLLNKMEEKGLKPGSREWNAVLVACSKAAETSAAIEVFKRMVEQGEK 542
TAAK RGIW+WGVRLLNKMEEKGLKPG REWNAVLVACSKAAETS AIE+F+RM++QGEK
Sbjct: 481 TAAKNRGIWRWGVRLLNKMEEKGLKPGIREWNAVLVACSKAAETSMAIEIFRRMIDQGEK 540
Query: 543 PTVLSYGALLSALEKGKLYDEARSVWDHMIKVGVKPNIYAYTTMASVFTGQGKFNMVEIT 602
PTVLSYGALLSALEKGKLYDEARSVWDHMIKVGV PNIYAYTTMASVFTGQGKFNMVE+T
Sbjct: 541 PTVLSYGALLSALEKGKLYDEARSVWDHMIKVGVAPNIYAYTTMASVFTGQGKFNMVELT 600
Query: 603 LNDMVASGIEPTVVTYNAIITGCVRNDMSSVAYEWFHRIKVRSISPNEVSYELLIEALAK 662
+NDMVASGIEPTVVTYNAIITGCVRN MSSVAYEWFHR+KVR+ISPNEVSYELLIEALAK
Sbjct: 601 INDMVASGIEPTVVTYNAIITGCVRNGMSSVAYEWFHRMKVRNISPNEVSYELLIEALAK 660
Query: 663 EGKPRLAYELYMRAKNDGLILSSKIYDAVIESSQVYGADIDIRSLGPRPPDK 682
+GKPRLAYELYM+A N+GL LSSKIYDAVI SSQVYGA IDI LGPRPPD+
Sbjct: 661 DGKPRLAYELYMKANNEGLNLSSKIYDAVIHSSQVYGASIDISLLGPRPPDE 710
BLAST of Sed0025706 vs. NCBI nr
Match:
XP_038898205.1 (protein LOW PHOTOSYNTHETIC EFFICIENCY 1, chloroplastic [Benincasa hispida])
HSP 1 Score: 1150.2 bits (2974), Expect = 0.0e+00
Identity = 583/715 (81.54%), Postives = 634/715 (88.67%), Query Frame = 0
Query: 3 MHVLSIWCPISSSCLELGSYSVVNALRKRINCVGFSEFRCGNGNFSVISFNLSVLRSGFC 62
MHVLS WCP SSS +ELGSYSVV+ RI C GFS+ CGNG FS+ISFN SVLRSGFC
Sbjct: 1 MHVLSNWCPTSSSGVELGSYSVVHRSWNRIKCFGFSDCSCGNGGFSLISFNSSVLRSGFC 60
Query: 63 YEDS----KIDFK--------------LKRKIGDWVLSALAVEQSTIDGEIVRVESKSGD 122
YE+S +F+ + +G W LSA AVE+ TID E+ RVES S D
Sbjct: 61 YENSTFVCNCEFRHGCSKLGVASLMKPKRNSLGAWCLSAWAVEEPTIDDELARVESSSRD 120
Query: 123 DLPKRSLDWDCD-DYDNGNGENS--------------QGDVRVDVRALAARLELARTADD 182
LP+RSL+WD D D+DN NGENS +GDVRVDV ALAA+L+LARTADD
Sbjct: 121 GLPERSLEWDDDHDHDNVNGENSHGGGSFKDEEGMEGEGDVRVDVCALAAQLQLARTADD 180
Query: 183 VEDVLEDVGELPLQVFSSIIRGFGRDKRLECAMALVEWLKRKKIETNGRISPNLFIYNSL 242
V++VL+DVGELPLQVFSS+IRGFGRD+RLECA+ALVEWLKRKKIETNGRI PNLF YNSL
Sbjct: 181 VDEVLKDVGELPLQVFSSMIRGFGRDRRLECAVALVEWLKRKKIETNGRIGPNLFTYNSL 240
Query: 243 LGAVKQSGEISKLEDVLNDMEQQGIVSNVVTYNTIMSIYLEKGLAVKALGILEEMPKKGL 302
LGAVKQSGE+SK+E+VL DM Q+GIVSNVVTYNTIMSIYLE+GLA+KALGILEEMPKKGL
Sbjct: 241 LGAVKQSGELSKMENVLTDMAQEGIVSNVVTYNTIMSIYLEQGLAMKALGILEEMPKKGL 300
Query: 303 TLSPVSYSTALRAYRRMKDGNGALKFMVELRERYRNGEIAKDDNVDWADEFLKLENFTRR 362
TLSPVSYSTALRAYRRMKDGNGALKFM+ELRERY NGEIAKDDNVDW +EFLKLENFTRR
Sbjct: 301 TLSPVSYSTALRAYRRMKDGNGALKFMIELRERYHNGEIAKDDNVDWTNEFLKLENFTRR 360
Query: 363 VCYQVMRIWLVKGDSASTKVLQLLTEMDKAELSLDRAEEERLIWACTCAEHHNVAKELYY 422
VCYQVMRIWLVKGD ASTKVLQLL EMDKA LSLDRAE+ERLIWACTCAEHHNVAKELYY
Sbjct: 361 VCYQVMRIWLVKGDCASTKVLQLLMEMDKAGLSLDRAEQERLIWACTCAEHHNVAKELYY 420
Query: 423 RIREKQSGISLSVCNHVIWLLGKAKKWWAALEIYEDLLEKGPKPNNMSYELIVSHFNVLL 482
RIREKQ GISLSVCNHVIWL+GKAKKWWAALE+YEDLLEKGPKPNNMSYELIVSHFNVLL
Sbjct: 421 RIREKQCGISLSVCNHVIWLMGKAKKWWAALEVYEDLLEKGPKPNNMSYELIVSHFNVLL 480
Query: 483 TAAKKRGIWKWGVRLLNKMEEKGLKPGSREWNAVLVACSKAAETSAAIEVFKRMVEQGEK 542
TAAKKRGIW+WGVRLLNKMEEKGL+PG REWNAVLVACS+AAETSAAI++F+RMVEQGEK
Sbjct: 481 TAAKKRGIWRWGVRLLNKMEEKGLRPGRREWNAVLVACSRAAETSAAIDIFRRMVEQGEK 540
Query: 543 PTVLSYGALLSALEKGKLYDEARSVWDHMIKVGVKPNIYAYTTMASVFTGQGKFNMVEIT 602
PTVLSYGALLSALEKGKLYDEARSVWDHMI+VGV+PNIYAYTTMASVFTGQGKFNMVE+T
Sbjct: 541 PTVLSYGALLSALEKGKLYDEARSVWDHMIRVGVEPNIYAYTTMASVFTGQGKFNMVEVT 600
Query: 603 LNDMVASGIEPTVVTYNAIITGCVRNDMSSVAYEWFHRIKVRSISPNEVSYELLIEALAK 662
++DMVASGIEPTVVTYNAIITGCVRN MSSVAYEWFHR+KVR+ISPNEVSYELLIEALAK
Sbjct: 601 ISDMVASGIEPTVVTYNAIITGCVRNGMSSVAYEWFHRMKVRNISPNEVSYELLIEALAK 660
Query: 663 EGKPRLAYELYMRAKNDGLILSSKIYDAVIESSQVYGADIDIRSLGPRPPDKKSS 685
EGKPRLAYELYMRAK++GL LSSKIYDAVI+SSQ+YGA IDIR LG RPPDK S
Sbjct: 661 EGKPRLAYELYMRAKDEGLNLSSKIYDAVIQSSQLYGASIDIRLLGLRPPDKNKS 715
BLAST of Sed0025706 vs. ExPASy Swiss-Prot
Match:
Q9SNB7 (Protein LOW PHOTOSYNTHETIC EFFICIENCY 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LPE1 PE=1 SV=1)
HSP 1 Score: 761.9 bits (1966), Expect = 6.1e-219
Identity = 372/568 (65.49%), Postives = 465/568 (81.87%), Query Frame = 0
Query: 116 DDYDNGNGENSQGDVRVDVRALAARLELARTADDVEDVLEDVGELPLQVFSSIIRGFGRD 175
+D + NG + ++RVDVR LA L A+TADDV+ VL+D GELPLQVF ++I+GFG+D
Sbjct: 101 EDLSSANG-GEKNNLRVDVRELAFSLRAAKTADDVDAVLKDKGELPLQVFCAMIKGFGKD 160
Query: 176 KRLECAMALVEWLKRKKIETNGRISPNLFIYNSLLGAVKQSGEISKLEDVLNDMEQQGIV 235
KRL+ A+A+V+WLKRKK E+ G I PNLFIYNSLLGA++ GE K +L DME++GIV
Sbjct: 161 KRLKPAVAVVDWLKRKKSESGGVIGPNLFIYNSLLGAMRGFGEAEK---ILKDMEEEGIV 220
Query: 236 SNVVTYNTIMSIYLEKGLAVKALGILEEMPKKGLTLSPVSYSTALRAYRRMKDGNGALKF 295
N+VTYNT+M IY+E+G +KALGIL+ +KG +P++YSTAL YRRM+DG GAL+F
Sbjct: 221 PNIVTYNTLMVIYMEEGEFLKALGILDLTKEKGFEPNPITYSTALLVYRRMEDGMGALEF 280
Query: 296 MVELRERYRNGEIAKDDNVDWADEFLKLENFTRRVCYQVMRIWLVKGDSASTKVLQLLTE 355
VELRE+Y EI D DW EF+KLENF R+CYQVMR WLVK D+ +T+VL+LL
Sbjct: 281 FVELREKYAKREIGNDVGYDWEFEFVKLENFIGRICYQVMRRWLVKDDNWTTRVLKLLNA 340
Query: 356 MDKAELSLDRAEEERLIWACTCAEHHNVAKELYYRIREKQSGISLSVCNHVIWLLGKAKK 415
MD A + R E ERLIWACT EH+ V KELY RIRE+ S ISLSVCNH+IWL+GKAKK
Sbjct: 341 MDSAGVRPSREEHERLIWACTREEHYIVGKELYKRIRERFSEISLSVCNHLIWLMGKAKK 400
Query: 416 WWAALEIYEDLLEKGPKPNNMSYELIVSHFNVLLTAAKKRGIWKWGVRLLNKMEEKGLKP 475
WWAALEIYEDLL++GP+PNN+SYEL+VSHFN+LL+AA KRGIW+WGVRLLNKME+KGLKP
Sbjct: 401 WWAALEIYEDLLDEGPEPNNLSYELVVSHFNILLSAASKRGIWRWGVRLLNKMEDKGLKP 460
Query: 476 GSREWNAVLVACSKAAETSAAIEVFKRMVEQGEKPTVLSYGALLSALEKGKLYDEARSVW 535
R WNAVLVACSKA+ET+AAI++FK MV+ GEKPTV+SYGALLSALEKGKLYDEA VW
Sbjct: 461 QRRHWNAVLVACSKASETTAAIQIFKAMVDNGEKPTVISYGALLSALEKGKLYDEAFRVW 520
Query: 536 DHMIKVGVKPNIYAYTTMASVFTGQGKFNMVEITLNDMVASGIEPTVVTYNAIITGCVRN 595
+HMIKVG++PN+YAYTTMASV TGQ KFN+++ L +M + GIEP+VVT+NA+I+GC RN
Sbjct: 521 NHMIKVGIEPNLYAYTTMASVLTGQQKFNLLDTLLKEMASKGIEPSVVTFNAVISGCARN 580
Query: 596 DMSSVAYEWFHRIKVRSISPNEVSYELLIEALAKEGKPRLAYELYMRAKNDGLILSSKIY 655
+S VAYEWFHR+K ++ PNE++YE+LIEALA + KPRLAYEL+++A+N+GL LSSK Y
Sbjct: 581 GLSGVAYEWFHRMKSENVEPNEITYEMLIEALANDAKPRLAYELHVKAQNEGLKLSSKPY 640
Query: 656 DAVIESSQVYGADIDIRSLGPRPPDKKS 684
DAV++S++ YGA ID+ LGPR PDKK+
Sbjct: 641 DAVVKSAETYGATIDLNLLGPR-PDKKN 663
BLAST of Sed0025706 vs. ExPASy Swiss-Prot
Match:
Q9FIX3 (Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX=3702 GN=EMB2745 PE=2 SV=1)
HSP 1 Score: 129.8 bits (325), Expect = 1.2e-28
Identity = 123/502 (24.50%), Postives = 223/502 (44.42%), Query Frame = 0
Query: 164 VFSSIIRGFGRDKRLECAMALVEWLKRKKIETNGRISPNLFIYNSLLGA-VKQSGEISKL 223
VF +++ + R ++ A+++V + +G P + YN++L A ++ IS
Sbjct: 136 VFDLVVKSYSRLSLIDKALSIVH-----LAQAHG-FMPGVLSYNAVLDATIRSKRNISFA 195
Query: 224 EDVLNDMEQQGIVSNVVTYNTIMSIYLEKGLAVKALGILEEMPKKGLTLSPVSYSTALRA 283
E+V +M + + NV TYN ++ + G AL + ++M KG + V+Y+T +
Sbjct: 196 ENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDG 255
Query: 284 YRRMKDGNGALKFMVELRERYRNGEIAKDDNVDWADEFLKLENFTRRVCYQVMRIWLVKG 343
Y +++ + K LR G LE + Y V+ L +
Sbjct: 256 YCKLRKIDDGFKL---LRSMALKG----------------LE--PNLISYNVVINGLCR- 315
Query: 344 DSASTKVLQLLTEMDKAELSLDRAEEERLIWACTCAEHHNVAKELYYRIREKQSGISLSV 403
+ +V +LTEM++ SLD LI C E N + L + G++ SV
Sbjct: 316 EGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKG-YCKE-GNFHQALVMHAEMLRHGLTPSV 375
Query: 404 CNH--VIWLLGKAKKWWAALEIYEDLLEKGPKPNNMSYELIVSHFNVLLTAAKKRGIWKW 463
+ +I + KA A+E + + +G PN +Y +V F+ ++G
Sbjct: 376 ITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFS-------QKGYMNE 435
Query: 464 GVRLLNKMEEKGLKPGSREWNAVLVACSKAAETSAAIEVFKRMVEQGEKPTVLSYGALLS 523
R+L +M + G P +NA++ + AI V + M E+G P V+SY +LS
Sbjct: 436 AYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLS 495
Query: 524 ALEKGKLYDEARSVWDHMIKVGVKPNIYAYTTMASVFTGQGKFNMVEITLNDMVASGIEP 583
+ DEA V M++ G+KP+ Y+++ F Q + +M+ G+ P
Sbjct: 496 GFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPP 555
Query: 584 TVVTYNAIITG-CVRNDMSSVAYEWFHRIKVRSISPNEVSYELLIEALAKEGKPRLAYEL 643
TY A+I C+ D+ A + + + + + P+ V+Y +LI L K+ + R A L
Sbjct: 556 DEFTYTALINAYCMEGDLEK-ALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRL 599
Query: 644 YMRAKNDGLILSSKIYDAVIES 662
++ + + S Y +IE+
Sbjct: 616 LLKLFYEESVPSDVTYHTLIEN 599
BLAST of Sed0025706 vs. ExPASy Swiss-Prot
Match:
Q3EDF8 (Pentatricopeptide repeat-containing protein At1g09900 OS=Arabidopsis thaliana OX=3702 GN=At1g09900 PE=2 SV=1)
HSP 1 Score: 128.6 bits (322), Expect = 2.6e-28
Identity = 122/491 (24.85%), Postives = 207/491 (42.16%), Query Frame = 0
Query: 201 PNLFIYNSLLGAVKQSGEISKLEDVLNDMEQQGIVSNVVTYNTIMSIYLEKGLAVKALGI 260
P++ +L+ + G+ K +L +E G V +V+TYN ++S Y + G AL +
Sbjct: 135 PDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSV 194
Query: 261 LEEMPKKGLTLSP--VSYSTALRAYRRMKDGNGALKFMVELRERYRNGEIAKDDNVDWAD 320
L+ M ++SP V+Y+T LR+ +G LK +E+ D
Sbjct: 195 LDRM-----SVSPDVVTYNTILRSL----CDSGKLKQAMEV-----------------LD 254
Query: 321 EFLKLENFTRRVCYQVMRIWLVKGDSASTKVLQLLTEMDKAELSLDRAEEERLIWACTCA 380
L+ + + + Y ++ I DS ++LL EM + D L+ C
Sbjct: 255 RMLQRDCYPDVITYTIL-IEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNG-ICK 314
Query: 381 EHHNVAKELYYRIREKQSGISLSVCNHVIWL--LGKAKKWWAALEIYEDLLEKGPKPNNM 440
E + + + + SG +V H I L + +W A ++ D+L KG P+
Sbjct: 315 E-GRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPS-- 374
Query: 441 SYELIVSHFNVLLTAAKKRGIWKWGVRLLNKMEEKGLKPGSREWNAVLVACSKAAETSAA 500
V FN+L+ ++G+ + +L KM + G +P S +N +L K + A
Sbjct: 375 -----VVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRA 434
Query: 501 IEVFKRMVEQGEKPTVLSYGALLSALEKGKLYDEARSVWDHMIKVGVKPNIYAYTTMASV 560
IE +RMV +G P +++Y +L+AL K ++A + + + G P + Y T+
Sbjct: 435 IEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDG 494
Query: 561 FTGQGKFNMVEITLNDMVASGIEPTVVTYNAIITGCVRNDMSSVAYEWFHRIK------- 620
GK L++M A ++P +TY++++ G R A ++FH +
Sbjct: 495 LAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPN 554
Query: 621 ----------------------------VRSISPNEVSYELLIEALAKEGKPRLAYELYM 653
R PNE SY +LIE LA EG + A EL
Sbjct: 555 AVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLN 589
BLAST of Sed0025706 vs. ExPASy Swiss-Prot
Match:
Q76C99 (Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica OX=39946 GN=Rf1 PE=2 SV=1)
HSP 1 Score: 128.6 bits (322), Expect = 2.6e-28
Identity = 120/554 (21.66%), Postives = 255/554 (46.03%), Query Frame = 0
Query: 145 RTADDVEDVLEDVGELPL--QVFS--SIIRGFGRDKRLECAMALVEWLKRKKIETNGRIS 204
RT+D ++ VL + EL VFS +++G + R + A+ L+ + + G
Sbjct: 137 RTSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMAD---DRGGGSP 196
Query: 205 PNLFIYNSLLGAVKQSGEISKLEDVLNDMEQQGIVSNVVTYNTIMSIYLEKGLAVKALGI 264
P++ Y +++ + G+ K ++M +GI+ +VVTYN+I++ + KA+ +
Sbjct: 197 PDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEV 256
Query: 265 LEEMPKKGLTLSPVSYSTALRAYRRMKDGNGALKFMVELRERYRNGEIAKDDNVDWA--- 324
L M K G+ ++Y++ L Y A+ F+ ++R + + D V ++
Sbjct: 257 LNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMR-----SDGVEPDVVTYSLLM 316
Query: 325 DEFLK----------LENFTRRVCYQVMRIW--LVKGDSASTKVLQ---LLTEMDKAELS 384
D K ++ T+R + + L++G + +++ LL M + +
Sbjct: 317 DYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIH 376
Query: 385 LDRAEEERLIWACTCAEHHNVAKELYYRIREKQSGISLSVCNH--VIWLLGKAKKWWAAL 444
D LI C A+ V + + + +Q G++ + + VI +L K+ + A+
Sbjct: 377 PDHYVFSILI--CAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAM 436
Query: 445 EIYEDLLEKGPKPNNMSYELIVSHFNVLLTAAKKRGIWKWGVRLLNKMEEKGLKPGSREW 504
+E ++++G P N+ Y ++ + L T K W+ L+ +M ++G+ + +
Sbjct: 437 LYFEQMIDEGLSPGNIVYNSLI---HGLCTCNK----WERAEELILEMLDRGICLNTIFF 496
Query: 505 NAVLVACSKAAETSAAIEVFKRMVEQGEKPTVLSYGALLSALEKGKLYDEARSVWDHMIK 564
N+++ + K + ++F+ MV G KP V++Y L++ DEA + M+
Sbjct: 497 NSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVS 556
Query: 565 VGVKPNIYAYTTMASVFTGQGKFNMVEITLNDMVASGIEPTVVTYNAIITGCVRNDMSSV 624
VG+KPN Y+T+ + + + + +M +SG+ P ++TYN I+ G + ++
Sbjct: 557 VGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAA 616
Query: 625 AYEWFHRIKVRSISPNEVSYELLIEALAKEGKPRLAYELYMRAKNDGLILSSKIYDAVIE 675
A E + RI +Y +++ L K A +++ L L ++ ++ +I+
Sbjct: 617 AKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMID 673
BLAST of Sed0025706 vs. ExPASy Swiss-Prot
Match:
Q9LFC5 (Pentatricopeptide repeat-containing protein At5g01110 OS=Arabidopsis thaliana OX=3702 GN=At5g01110 PE=2 SV=1)
HSP 1 Score: 127.1 bits (318), Expect = 7.6e-28
Identity = 112/492 (22.76%), Postives = 216/492 (43.90%), Query Frame = 0
Query: 187 WLKRKKIETNGRISPNLFIYNSLLGAVKQSGEISKLEDVLNDMEQQGIVSNVVTYNTIMS 246
W ++I +G + N++ N ++ A+ + G++ K+ L+ ++++G+ ++VTYNT++S
Sbjct: 220 WGVYQEISRSG-VGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLIS 279
Query: 247 IYLEKGLAVKALGILEEMPKKGLTLSPVSYSTALRA------YRRMKD----------GN 306
Y KGL +A ++ MP KG + +Y+T + Y R K+
Sbjct: 280 AYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSP 339
Query: 307 GALKFMVELRERYRNGEIAKDDNVDWADEFLKLENFTRRVCYQVMRIWLVKGDSASTKVL 366
+ + L E + G++ + + V + + VC+ M + + K L
Sbjct: 340 DSTTYRSLLMEACKKGDVVETEKV--FSDMRSRDVVPDLVCFSSMMSLFTRSGNLD-KAL 399
Query: 367 QLLTEMDKAELSLDRAEEERLIWACTCAEHHNVAKELYYRIREKQSGISLSVCNHVIWLL 426
+ +A L D LI +VA L + ++ + + N ++ L
Sbjct: 400 MYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGL 459
Query: 427 GKAKKWWAALEIYEDLLEKGPKPNNMSYELIVSHFNVLLTAAKKRGIWKWGVRLLNKMEE 486
K K A +++ ++ E+ P+ SY L +L+ K G + + L KM+E
Sbjct: 460 CKRKMLGEADKLFNEMTERALFPD--SYTL-----TILIDGHCKLGNLQNAMELFQKMKE 519
Query: 487 KGLKPGSREWNAVLVACSKAAETSAAIEVFKRMVEQGEKPTVLSYGALLSAL-EKGKLYD 546
K ++ +N +L K + A E++ MV + PT +SY L++AL KG L
Sbjct: 520 KRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHL-A 579
Query: 547 EARSVWDHMIKVGVKPNIYAYTTMASVFTGQGKFNMVEITLNDMVASGIEPTVVTYNAII 606
EA VWD MI +KP + +M + G + E L M++ G P ++YN +I
Sbjct: 580 EAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLI 639
Query: 607 TGCVRNDMSSVAYEWFHRIKVR--SISPNEVSYELLIEALAKEGKPRLAYELYMRAKNDG 660
G VR + S A+ +++ + P+ +Y ++ ++ + + A + + G
Sbjct: 640 YGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERG 699
BLAST of Sed0025706 vs. ExPASy TrEMBL
Match:
A0A6J1ERB6 (pentatricopeptide repeat-containing protein At3g46610-like OS=Cucurbita moschata OX=3662 GN=LOC111435163 PE=4 SV=1)
HSP 1 Score: 1152.1 bits (2979), Expect = 0.0e+00
Identity = 588/715 (82.24%), Postives = 631/715 (88.25%), Query Frame = 0
Query: 3 MHVLSIWCPISSSCLELGSYSVVNALRKRINCVGFSEFRCGNGNFSVISFNLSVLRSGFC 62
M +LS WCP SSS LELGSYSVVN RKRINCV FS CGNG F++I F+ SVLR GFC
Sbjct: 1 MSILSDWCP-SSSGLELGSYSVVNGSRKRINCVRFSGC-CGNGGFALIPFSSSVLRCGFC 60
Query: 63 YEDSKID-----------------FKLKR-KIGDWVLSALAVEQSTIDGEIVRVESKSGD 122
YE+SK D K KR +G W LSA AVEQ TIDGEIVRV+S SGD
Sbjct: 61 YENSKFDCNFEFRHGCSKLRVARLMKPKRNSLGVWFLSAWAVEQPTIDGEIVRVQSNSGD 120
Query: 123 DLPKRSLDWDCDDYDNGNGENS---------------QGDVRVDVRALAARLELARTADD 182
D P++SLDWD D D+ NGENS +GDV+VDVRALA RLELART DD
Sbjct: 121 DFPEKSLDWDEHDQDSVNGENSSGRSFKDEEGIEGEGEGDVKVDVRALAGRLELARTVDD 180
Query: 183 VEDVLEDVGELPLQVFSSIIRGFGRDKRLECAMALVEWLKRKKIETNGRISPNLFIYNSL 242
VE+VL+DVGELPLQVFSS+I+GFGRDKRL CAMALVEWLK +KIETNGRI+PNLFIYNSL
Sbjct: 181 VEEVLKDVGELPLQVFSSLIKGFGRDKRLGCAMALVEWLKTRKIETNGRIAPNLFIYNSL 240
Query: 243 LGAVKQSGEISKLEDVLNDMEQQGIVSNVVTYNTIMSIYLEKGLAVKALGILEEMPKKGL 302
LGAVKQSGE SK+ED+LNDM Q+GIVSNVVTYNTIMSIYL++GL +KAL ILEEMPKKGL
Sbjct: 241 LGAVKQSGEFSKMEDILNDMSQEGIVSNVVTYNTIMSIYLDQGLPMKALDILEEMPKKGL 300
Query: 303 TLSPVSYSTALRAYRRMKDGNGALKFMVELRERYRNGEIAKDDNVDWADEFLKLENFTRR 362
TLSPVSYSTALRAYRRMKDGNGALKFMVELRERYRNGEIAKDDNVDW DEFLKLENFTRR
Sbjct: 301 TLSPVSYSTALRAYRRMKDGNGALKFMVELRERYRNGEIAKDDNVDWDDEFLKLENFTRR 360
Query: 363 VCYQVMRIWLVKGDSASTKVLQLLTEMDKAELSLDRAEEERLIWACTCAEHHNVAKELYY 422
VCYQVMRIWLVKGDSASTKVLQLLTEMDKA LSLDRAEEERL+WACTCAEHHNVAKELYY
Sbjct: 361 VCYQVMRIWLVKGDSASTKVLQLLTEMDKAGLSLDRAEEERLVWACTCAEHHNVAKELYY 420
Query: 423 RIREKQSGISLSVCNHVIWLLGKAKKWWAALEIYEDLLEKGPKPNNMSYELIVSHFNVLL 482
RIREK+SGISLSVCNHVIWL+GKAKKWWAALEIYEDLLEKGPKPNN+SYELIVSHFNVLL
Sbjct: 421 RIREKKSGISLSVCNHVIWLMGKAKKWWAALEIYEDLLEKGPKPNNLSYELIVSHFNVLL 480
Query: 483 TAAKKRGIWKWGVRLLNKMEEKGLKPGSREWNAVLVACSKAAETSAAIEVFKRMVEQGEK 542
TAAK RGIW+WGVRLLNKMEEKGLKPG REWNAVLVACSKAA+TS AIE+F+RM++QGEK
Sbjct: 481 TAAKNRGIWRWGVRLLNKMEEKGLKPGIREWNAVLVACSKAAKTSMAIEIFRRMIDQGEK 540
Query: 543 PTVLSYGALLSALEKGKLYDEARSVWDHMIKVGVKPNIYAYTTMASVFTGQGKFNMVEIT 602
PTVLSYGALLSALEKGKLYDEARSVWDHMIKVGV PNIYAYTTMASVFTGQGKFNMVE+T
Sbjct: 541 PTVLSYGALLSALEKGKLYDEARSVWDHMIKVGVAPNIYAYTTMASVFTGQGKFNMVELT 600
Query: 603 LNDMVASGIEPTVVTYNAIITGCVRNDMSSVAYEWFHRIKVRSISPNEVSYELLIEALAK 662
+NDMVASGIEPTVVTYNAIITGCVRN MSSVAYEWFHR+KVR+ISPNEVSYELLIEALAK
Sbjct: 601 INDMVASGIEPTVVTYNAIITGCVRNGMSSVAYEWFHRMKVRNISPNEVSYELLIEALAK 660
Query: 663 EGKPRLAYELYMRAKNDGLILSSKIYDAVIESSQVYGADIDIRSLGPRPPDKKSS 685
+ KPRLAYELYM+AK++GL LSSKIYDAVI SSQVYGA IDI LGPRPPD+ S
Sbjct: 661 DSKPRLAYELYMKAKSEGLNLSSKIYDAVIHSSQVYGASIDISLLGPRPPDENKS 713
BLAST of Sed0025706 vs. ExPASy TrEMBL
Match:
A0A6J1JQT1 (pentatricopeptide repeat-containing protein At3g46610-like OS=Cucurbita maxima OX=3661 GN=LOC111486640 PE=4 SV=1)
HSP 1 Score: 1151.3 bits (2977), Expect = 0.0e+00
Identity = 587/713 (82.33%), Postives = 629/713 (88.22%), Query Frame = 0
Query: 3 MHVLSIWCPISSSCLELGSYSVVNALRKRINCVGFSEFRCGNGNFSVISFNLSVLRSGFC 62
M +LS WCP SSS LELG SVVN RKRINCVGFS CGNG FS+I F+ SVLR GFC
Sbjct: 1 MSILSDWCP-SSSGLELGCSSVVNGSRKRINCVGFSGC-CGNGGFSLIPFSSSVLRCGFC 60
Query: 63 YEDSKID-----------------FKLKR-KIGDWVLSALAVEQSTIDGEIVRVESKSGD 122
YE+SK D K KR +G W LSA AVEQ TIDGEIVRV+S GD
Sbjct: 61 YENSKFDCNFEFRHGCSKLRVARLMKPKRNSLGVWFLSAWAVEQPTIDGEIVRVQSNCGD 120
Query: 123 DLPKRSLDWDCDDYDNGNGENS-------------QGDVRVDVRALAARLELARTADDVE 182
D P++SLDWD D+D N ENS +GDV+VDVRALA RLELART DDVE
Sbjct: 121 DFPEKSLDWDDHDHDTVNSENSNGRSFKDEEGIEGEGDVKVDVRALAGRLELARTVDDVE 180
Query: 183 DVLEDVGELPLQVFSSIIRGFGRDKRLECAMALVEWLKRKKIETNGRISPNLFIYNSLLG 242
+VL+DVGELPLQVFSS+I+GFGRDKRL CA+ALVEWLK +KI+TNGRI+PNLFIYNSLLG
Sbjct: 181 EVLKDVGELPLQVFSSLIKGFGRDKRLGCALALVEWLKTRKIKTNGRIAPNLFIYNSLLG 240
Query: 243 AVKQSGEISKLEDVLNDMEQQGIVSNVVTYNTIMSIYLEKGLAVKALGILEEMPKKGLTL 302
AVKQSGE SK+ED+LNDM Q+GIVSNVVTYNTIMSIYL++GL +KAL ILEEMPKKGLTL
Sbjct: 241 AVKQSGEFSKMEDILNDMSQEGIVSNVVTYNTIMSIYLDQGLPMKALDILEEMPKKGLTL 300
Query: 303 SPVSYSTALRAYRRMKDGNGALKFMVELRERYRNGEIAKDDNVDWADEFLKLENFTRRVC 362
SPVSYSTALRAYRRMKDGNGALKFMVELRERYRNGEIAKDDNVDW DEFLKLENFTRRVC
Sbjct: 301 SPVSYSTALRAYRRMKDGNGALKFMVELRERYRNGEIAKDDNVDWDDEFLKLENFTRRVC 360
Query: 363 YQVMRIWLVKGDSASTKVLQLLTEMDKAELSLDRAEEERLIWACTCAEHHNVAKELYYRI 422
YQVMRIWLVKGDSASTKVLQLLTEMDKA LSLDRAEEERL+WACTCAEHHNVAKELYYRI
Sbjct: 361 YQVMRIWLVKGDSASTKVLQLLTEMDKAGLSLDRAEEERLVWACTCAEHHNVAKELYYRI 420
Query: 423 REKQSGISLSVCNHVIWLLGKAKKWWAALEIYEDLLEKGPKPNNMSYELIVSHFNVLLTA 482
REK+SGISLSVCNHVIWL+GKAKKWWAALEIYEDLLEKGPKPNN+SYELIVSHFNVLLTA
Sbjct: 421 REKKSGISLSVCNHVIWLMGKAKKWWAALEIYEDLLEKGPKPNNLSYELIVSHFNVLLTA 480
Query: 483 AKKRGIWKWGVRLLNKMEEKGLKPGSREWNAVLVACSKAAETSAAIEVFKRMVEQGEKPT 542
AK RGIW+WGVRLLNKMEEKGLKPG REWNAVLVACS+AAETS AIE+F+RMV+QGEKPT
Sbjct: 481 AKNRGIWRWGVRLLNKMEEKGLKPGIREWNAVLVACSRAAETSMAIEIFRRMVDQGEKPT 540
Query: 543 VLSYGALLSALEKGKLYDEARSVWDHMIKVGVKPNIYAYTTMASVFTGQGKFNMVEITLN 602
VLSYGALLSALEKGKLYDEARSVWDHMIKVGV PNIYAYTTMASVFTGQGKFNMVE+T+N
Sbjct: 541 VLSYGALLSALEKGKLYDEARSVWDHMIKVGVAPNIYAYTTMASVFTGQGKFNMVELTIN 600
Query: 603 DMVASGIEPTVVTYNAIITGCVRNDMSSVAYEWFHRIKVRSISPNEVSYELLIEALAKEG 662
DMVASGIEPTVVTYNAIITGCVRN MSSVAYEWFHR+KVR+ISPNEVSYELLIEALAK+G
Sbjct: 601 DMVASGIEPTVVTYNAIITGCVRNGMSSVAYEWFHRMKVRNISPNEVSYELLIEALAKDG 660
Query: 663 KPRLAYELYMRAKNDGLILSSKIYDAVIESSQVYGADIDIRSLGPRPPDKKSS 685
KPRLAYELYM+A N+GL LSSKIYDAVI SSQVYGA IDIR LGPRPPD+ S
Sbjct: 661 KPRLAYELYMKANNEGLNLSSKIYDAVIHSSQVYGASIDIRLLGPRPPDENKS 711
BLAST of Sed0025706 vs. ExPASy TrEMBL
Match:
A0A0A0LB88 (PPR_long domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G595200 PE=3 SV=1)
HSP 1 Score: 1137.5 bits (2941), Expect = 0.0e+00
Identity = 577/714 (80.81%), Postives = 632/714 (88.52%), Query Frame = 0
Query: 3 MHVLSIWCPISSSCLELGSYSVVNALRKRINCVGFSEFRCGNGNFSVISFNLSVLRSGFC 62
MH LS WCP S S +ELGSYSVV+ KR+ GFS+ RCGN FS+ISFNLSVLRSGFC
Sbjct: 1 MHALSNWCPTSCSGVELGSYSVVHRSWKRVKSFGFSDCRCGNWGFSLISFNLSVLRSGFC 60
Query: 63 YEDSKI----DFK--------------LKRKIGDWVLSALAVEQSTIDGEIVRVESKSGD 122
YE+S+ +F+ + +G + LSA AVEQ TID EI RVES S D
Sbjct: 61 YENSRFVCNCEFRHGCSKLRVVPLMKTNRNSLGAFCLSAWAVEQPTIDDEITRVESNSRD 120
Query: 123 DLPKRSLDWDCDDYDNGNGENSQ--------------GDVRVDVRALAARLELARTADDV 182
LP+R LDWD DD NGENS GDVRVDVRALAA+L+LARTADDV
Sbjct: 121 GLPERGLDWDDDDDGKVNGENSHGGGSFKDEGELEGVGDVRVDVRALAAQLQLARTADDV 180
Query: 183 EDVLEDVGELPLQVFSSIIRGFGRDKRLECAMALVEWLKRKKIETNGRISPNLFIYNSLL 242
+ VL+D+ ELPLQVFSS+IRGFGRD+RLECA+ALV+WLKRKKIETNGRI+PNLFIYNSLL
Sbjct: 181 DQVLKDMVELPLQVFSSMIRGFGRDRRLECAVALVDWLKRKKIETNGRIAPNLFIYNSLL 240
Query: 243 GAVKQSGEISKLEDVLNDMEQQGIVSNVVTYNTIMSIYLEKGLAVKALGILEEMPKKGLT 302
GAVKQSGE+S++E+VL DM Q+GIVSNVVTYNTIMSIYLE+GLA+KALGILEEMPKKGLT
Sbjct: 241 GAVKQSGELSRMENVLTDMAQEGIVSNVVTYNTIMSIYLEQGLAMKALGILEEMPKKGLT 300
Query: 303 LSPVSYSTALRAYRRMKDGNGALKFMVELRERYRNGEIAKDDNVDWADEFLKLENFTRRV 362
LSPVSYSTALRAYRRMKDGNGALKFMVELRERYRNGEIAKDDNVDWA+EFLKLENFTRRV
Sbjct: 301 LSPVSYSTALRAYRRMKDGNGALKFMVELRERYRNGEIAKDDNVDWANEFLKLENFTRRV 360
Query: 363 CYQVMRIWLVKGDSASTKVLQLLTEMDKAELSLDRAEEERLIWACTCAEHHNVAKELYYR 422
CYQVMRIWLVKGD ASTKVLQLL EMDKA LSLDRAE ERLIWACTCAEH+NVAKELY+R
Sbjct: 361 CYQVMRIWLVKGDCASTKVLQLLMEMDKAGLSLDRAEAERLIWACTCAEHYNVAKELYFR 420
Query: 423 IREKQSGISLSVCNHVIWLLGKAKKWWAALEIYEDLLEKGPKPNNMSYELIVSHFNVLLT 482
IREKQ GISLSVCNHVIWL+GKAKKWWAALEIYEDLLEKGPKPNNMSYELIVSHFNVLLT
Sbjct: 421 IREKQCGISLSVCNHVIWLMGKAKKWWAALEIYEDLLEKGPKPNNMSYELIVSHFNVLLT 480
Query: 483 AAKKRGIWKWGVRLLNKMEEKGLKPGSREWNAVLVACSKAAETSAAIEVFKRMVEQGEKP 542
AAKKRGIW+WGVRLLNKMEEKGL+PGSREWNAVLVACS+AAETSAAI++F++MVEQGEKP
Sbjct: 481 AAKKRGIWRWGVRLLNKMEEKGLRPGSREWNAVLVACSRAAETSAAIDIFRKMVEQGEKP 540
Query: 543 TVLSYGALLSALEKGKLYDEARSVWDHMIKVGVKPNIYAYTTMASVFTGQGKFNMVEITL 602
TVLSYGALLSALEKGKLYDEARSVWDHMI+VGV+PNIYAYTTMASVFTGQGKFNMVE+T+
Sbjct: 541 TVLSYGALLSALEKGKLYDEARSVWDHMIRVGVEPNIYAYTTMASVFTGQGKFNMVEVTI 600
Query: 603 NDMVASGIEPTVVTYNAIITGCVRNDMSSVAYEWFHRIKVRSISPNEVSYELLIEALAKE 662
NDMVASGIEPTVVTYNAIITGCVRN MSSVAYEWFHR+KVR+ISPNEVSYELLIEALAKE
Sbjct: 601 NDMVASGIEPTVVTYNAIITGCVRNGMSSVAYEWFHRMKVRNISPNEVSYELLIEALAKE 660
Query: 663 GKPRLAYELYMRAKNDGLILSSKIYDAVIESSQVYGADIDIRSLGPRPPDKKSS 685
GKPRLAYELYMRAK++GL LSSK+YDAVIESSQ+YGA ++I+ LG RPPD+ S
Sbjct: 661 GKPRLAYELYMRAKDEGLNLSSKVYDAVIESSQLYGASVNIKLLGLRPPDRNKS 714
BLAST of Sed0025706 vs. ExPASy TrEMBL
Match:
A0A5D3E368 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold595G00640 PE=3 SV=1)
HSP 1 Score: 1131.3 bits (2925), Expect = 0.0e+00
Identity = 577/714 (80.81%), Postives = 627/714 (87.82%), Query Frame = 0
Query: 3 MHVLSIWCPISSSCLELGSYSVVNALRKRINCVGFSEFRCGNGNFSVISFNLSVLRSGFC 62
MHVLS WCP S S ++LGSYSVV+ KRI C GFS+ CGN FS+ISFNLSVL SGFC
Sbjct: 1 MHVLSNWCPTSCSGVDLGSYSVVHRSWKRIKCFGFSDCCCGNWGFSLISFNLSVLGSGFC 60
Query: 63 YEDSKI----DFK--------------LKRKIGDWVLSALAVEQSTIDGEIVRVESKSGD 122
YE+S+ +F+ + + W LSA VEQ TI E+ RVES S D
Sbjct: 61 YENSRFVCNCEFRHGYSKLRVVPLMKPNRNSLEAWCLSAWTVEQPTIGDELPRVESNSRD 120
Query: 123 DLPKRSLDWDCDDYDNGNGENSQ--------------GDVRVDVRALAARLELARTADDV 182
LP+R LDWD DD DN NGENS GDVRVDVRALAA+L+LARTADDV
Sbjct: 121 GLPERRLDWDGDDDDNVNGENSHGGGSFKDEGEMEGVGDVRVDVRALAAQLQLARTADDV 180
Query: 183 EDVLEDVGELPLQVFSSIIRGFGRDKRLECAMALVEWLKRKKIETNGRISPNLFIYNSLL 242
+ VL+D+ ELPLQVFSS+IRGFGRD+RLECA+ALV+WLKRKKIETNGRI+PNLFIYNSLL
Sbjct: 181 DQVLKDMVELPLQVFSSMIRGFGRDRRLECAVALVDWLKRKKIETNGRIAPNLFIYNSLL 240
Query: 243 GAVKQSGEISKLEDVLNDMEQQGIVSNVVTYNTIMSIYLEKGLAVKALGILEEMPKKGLT 302
GAVKQSGE+SK+E+VL +M Q+GIVSNVVTYNTIMSIYLE+GLA KALGILEEMPKKGLT
Sbjct: 241 GAVKQSGELSKMENVLTEMAQEGIVSNVVTYNTIMSIYLEQGLATKALGILEEMPKKGLT 300
Query: 303 LSPVSYSTALRAYRRMKDGNGALKFMVELRERYRNGEIAKDDNVDWADEFLKLENFTRRV 362
LSPVSYSTALRAYR+MKDGNGAL+FMVELRERY NGEIAKDDNVDWA+EFLKLENFTRRV
Sbjct: 301 LSPVSYSTALRAYRKMKDGNGALEFMVELRERYHNGEIAKDDNVDWANEFLKLENFTRRV 360
Query: 363 CYQVMRIWLVKGDSASTKVLQLLTEMDKAELSLDRAEEERLIWACTCAEHHNVAKELYYR 422
CYQVMRIWLVKGD ASTKVLQLL EMDKA LSLDRAEEERLIWACTCAEH+NVAKELY R
Sbjct: 361 CYQVMRIWLVKGDCASTKVLQLLMEMDKAGLSLDRAEEERLIWACTCAEHYNVAKELYIR 420
Query: 423 IREKQSGISLSVCNHVIWLLGKAKKWWAALEIYEDLLEKGPKPNNMSYELIVSHFNVLLT 482
IREKQ GISLSVCNHVIWL+GKAKKWWAALEIYE+LLEKGPKPNNMSYELIVSHFNVLLT
Sbjct: 421 IREKQCGISLSVCNHVIWLMGKAKKWWAALEIYEELLEKGPKPNNMSYELIVSHFNVLLT 480
Query: 483 AAKKRGIWKWGVRLLNKMEEKGLKPGSREWNAVLVACSKAAETSAAIEVFKRMVEQGEKP 542
AAKKRGIW+WGVRLLNKMEEKGL+PGSREWNAVLVACS+AAETSAAI++F+RMVEQGEKP
Sbjct: 481 AAKKRGIWRWGVRLLNKMEEKGLRPGSREWNAVLVACSRAAETSAAIDIFRRMVEQGEKP 540
Query: 543 TVLSYGALLSALEKGKLYDEARSVWDHMIKVGVKPNIYAYTTMASVFTGQGKFNMVEITL 602
TVLSYGALLSALEKGKLYDEARSVWDHMI+VGV+PNIYAYTTMASVFT QGKFNMVE+T+
Sbjct: 541 TVLSYGALLSALEKGKLYDEARSVWDHMIRVGVEPNIYAYTTMASVFTSQGKFNMVEVTI 600
Query: 603 NDMVASGIEPTVVTYNAIITGCVRNDMSSVAYEWFHRIKVRSISPNEVSYELLIEALAKE 662
NDMVASGIEPTVVTYNAIITGCVRN MSSVAYEWFHR+KVR+ISPNEVSYELLIEALAKE
Sbjct: 601 NDMVASGIEPTVVTYNAIITGCVRNGMSSVAYEWFHRMKVRNISPNEVSYELLIEALAKE 660
Query: 663 GKPRLAYELYMRAKNDGLILSSKIYDAVIESSQVYGADIDIRSLGPRPPDKKSS 685
GKPRLAYELY RAK++GL LSSKIYDAVIESSQ+YGA IDIR LG RPPDK S
Sbjct: 661 GKPRLAYELYRRAKDEGLNLSSKIYDAVIESSQLYGASIDIRLLGLRPPDKNKS 714
BLAST of Sed0025706 vs. ExPASy TrEMBL
Match:
A0A6J1DL11 (pentatricopeptide repeat-containing protein At3g46610 OS=Momordica charantia OX=3673 GN=LOC111021510 PE=3 SV=1)
HSP 1 Score: 1127.1 bits (2914), Expect = 0.0e+00
Identity = 578/721 (80.17%), Postives = 622/721 (86.27%), Query Frame = 0
Query: 3 MHVLSIWCPISSSCLELGSYSVVNALRKRINCVGFSEFRCGNGNFSVISFNLSVLRSGFC 62
MH LS WCP SSS +ELGS VV KR+ CVGFS+ CGNG FS+ISFNL V RSGFC
Sbjct: 1 MHALSNWCPTSSSKVELGSSCVVRRSGKRLKCVGFSDCCCGNGGFSLISFNLRVFRSGFC 60
Query: 63 YEDSKID-----------------FKLKR-KIGDWVLSALAVEQSTIDGEIVRVESKSGD 122
YE+SK D K KR +G W LSA AVEQ T+ EIVRVES S D
Sbjct: 61 YENSKFDCSCEFRHGCSKLIVARLMKPKRNSLGAWFLSAWAVEQPTVGNEIVRVESNSED 120
Query: 123 DLPKRS-------LDWDCDDYDNGNGEN--------------SQGDVRVDVRALAARLEL 182
DL +RS LDW DD+ N NGEN +GDV VDVRALA RL+L
Sbjct: 121 DLAERSEGEGYGGLDW--DDHHNVNGENGHGGGDFKDEDGMEGEGDVWVDVRALAGRLQL 180
Query: 183 ARTADDVEDVLEDVGELPLQVFSSIIRGFGRDKRLECAMALVEWLKRKKIETNGRISPNL 242
RTADDVE+VL+DVGELPLQVFSS+IRGFGRD+RLECA+ALV+WLKRKKIET+GRI+PNL
Sbjct: 181 TRTADDVEEVLKDVGELPLQVFSSMIRGFGRDRRLECAVALVDWLKRKKIETDGRIAPNL 240
Query: 243 FIYNSLLGAVKQSGEISKLEDVLNDMEQQGIVSNVVTYNTIMSIYLEKGLAVKALGILEE 302
FIYNSLLGAVKQS SK+EDVL DM Q+GI SNV+TYNTIMSIYLE+GLA+KALGILEE
Sbjct: 241 FIYNSLLGAVKQSTVFSKMEDVLADMAQEGITSNVITYNTIMSIYLEQGLAMKALGILEE 300
Query: 303 MPKKGLTLSPVSYSTALRAYRRMKDGNGALKFMVELRERYRNGEIAKDDNVDWADEFLKL 362
MPKKGLT SPVSYST L+AYRRMKDGNGALKFM ELRE+YR+GE+AKDDNVDWADEF+KL
Sbjct: 301 MPKKGLTPSPVSYSTGLQAYRRMKDGNGALKFMTELREKYRSGEMAKDDNVDWADEFMKL 360
Query: 363 ENFTRRVCYQVMRIWLVKGDSASTKVLQLLTEMDKAELSLDRAEEERLIWACTCAEHHNV 422
ENFT+RVCYQVMRIWLVKG SASTKVLQLL EMDKA LSLDRAEEERLIWACTCAEHHNV
Sbjct: 361 ENFTKRVCYQVMRIWLVKGYSASTKVLQLLVEMDKAGLSLDRAEEERLIWACTCAEHHNV 420
Query: 423 AKELYYRIREKQSGISLSVCNHVIWLLGKAKKWWAALEIYEDLLEKGPKPNNMSYELIVS 482
AKELYYRIREKQ GISLSVCNHVIWL+GKAKKWWAALEIYEDLLEKGPKPNNMSYELIVS
Sbjct: 421 AKELYYRIREKQCGISLSVCNHVIWLMGKAKKWWAALEIYEDLLEKGPKPNNMSYELIVS 480
Query: 483 HFNVLLTAAKKRGIWKWGVRLLNKMEEKGLKPGSREWNAVLVACSKAAETSAAIEVFKRM 542
HFNVLLTAAKKRGIW+WGVRLLNKMEEKGLKPGSREWNAVLVACSKAAETSAAIE+F+RM
Sbjct: 481 HFNVLLTAAKKRGIWRWGVRLLNKMEEKGLKPGSREWNAVLVACSKAAETSAAIEIFRRM 540
Query: 543 VEQGEKPTVLSYGALLSALEKGKLYDEARSVWDHMIKVGVKPNIYAYTTMASVFTGQGKF 602
VEQGEKPT+LSYGALLSALEKGKLYDEARSVWDHMIKVGVKPNIYAYTTMASVFTGQGKF
Sbjct: 541 VEQGEKPTILSYGALLSALEKGKLYDEARSVWDHMIKVGVKPNIYAYTTMASVFTGQGKF 600
Query: 603 NMVEITLNDMVASGIEPTVVTYNAIITGCVRNDMSSVAYEWFHRIKVRSISPNEVSYELL 662
NMVE+T+NDMV+SGIEPTVVTYNAIITGCVRN +SSVAYEWFHR+KVR+ISPNEVSYELL
Sbjct: 601 NMVEVTINDMVSSGIEPTVVTYNAIITGCVRNGLSSVAYEWFHRMKVRNISPNEVSYELL 660
Query: 663 IEALAKEGKPRLAYELYMRAKNDGLILSSKIYDAVIESSQVYGADIDIRSLGPRPPDKKS 685
IEALAKEGKPRLAYELY+RAKND L LSSK YDAVI+SSQVYGA IDIR+LG PPD
Sbjct: 661 IEALAKEGKPRLAYELYLRAKNDSLNLSSKTYDAVIQSSQVYGASIDIRALGSPPPDTNK 719
BLAST of Sed0025706 vs. TAIR 10
Match:
AT3G46610.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )
HSP 1 Score: 761.9 bits (1966), Expect = 4.3e-220
Identity = 372/568 (65.49%), Postives = 465/568 (81.87%), Query Frame = 0
Query: 116 DDYDNGNGENSQGDVRVDVRALAARLELARTADDVEDVLEDVGELPLQVFSSIIRGFGRD 175
+D + NG + ++RVDVR LA L A+TADDV+ VL+D GELPLQVF ++I+GFG+D
Sbjct: 101 EDLSSANG-GEKNNLRVDVRELAFSLRAAKTADDVDAVLKDKGELPLQVFCAMIKGFGKD 160
Query: 176 KRLECAMALVEWLKRKKIETNGRISPNLFIYNSLLGAVKQSGEISKLEDVLNDMEQQGIV 235
KRL+ A+A+V+WLKRKK E+ G I PNLFIYNSLLGA++ GE K +L DME++GIV
Sbjct: 161 KRLKPAVAVVDWLKRKKSESGGVIGPNLFIYNSLLGAMRGFGEAEK---ILKDMEEEGIV 220
Query: 236 SNVVTYNTIMSIYLEKGLAVKALGILEEMPKKGLTLSPVSYSTALRAYRRMKDGNGALKF 295
N+VTYNT+M IY+E+G +KALGIL+ +KG +P++YSTAL YRRM+DG GAL+F
Sbjct: 221 PNIVTYNTLMVIYMEEGEFLKALGILDLTKEKGFEPNPITYSTALLVYRRMEDGMGALEF 280
Query: 296 MVELRERYRNGEIAKDDNVDWADEFLKLENFTRRVCYQVMRIWLVKGDSASTKVLQLLTE 355
VELRE+Y EI D DW EF+KLENF R+CYQVMR WLVK D+ +T+VL+LL
Sbjct: 281 FVELREKYAKREIGNDVGYDWEFEFVKLENFIGRICYQVMRRWLVKDDNWTTRVLKLLNA 340
Query: 356 MDKAELSLDRAEEERLIWACTCAEHHNVAKELYYRIREKQSGISLSVCNHVIWLLGKAKK 415
MD A + R E ERLIWACT EH+ V KELY RIRE+ S ISLSVCNH+IWL+GKAKK
Sbjct: 341 MDSAGVRPSREEHERLIWACTREEHYIVGKELYKRIRERFSEISLSVCNHLIWLMGKAKK 400
Query: 416 WWAALEIYEDLLEKGPKPNNMSYELIVSHFNVLLTAAKKRGIWKWGVRLLNKMEEKGLKP 475
WWAALEIYEDLL++GP+PNN+SYEL+VSHFN+LL+AA KRGIW+WGVRLLNKME+KGLKP
Sbjct: 401 WWAALEIYEDLLDEGPEPNNLSYELVVSHFNILLSAASKRGIWRWGVRLLNKMEDKGLKP 460
Query: 476 GSREWNAVLVACSKAAETSAAIEVFKRMVEQGEKPTVLSYGALLSALEKGKLYDEARSVW 535
R WNAVLVACSKA+ET+AAI++FK MV+ GEKPTV+SYGALLSALEKGKLYDEA VW
Sbjct: 461 QRRHWNAVLVACSKASETTAAIQIFKAMVDNGEKPTVISYGALLSALEKGKLYDEAFRVW 520
Query: 536 DHMIKVGVKPNIYAYTTMASVFTGQGKFNMVEITLNDMVASGIEPTVVTYNAIITGCVRN 595
+HMIKVG++PN+YAYTTMASV TGQ KFN+++ L +M + GIEP+VVT+NA+I+GC RN
Sbjct: 521 NHMIKVGIEPNLYAYTTMASVLTGQQKFNLLDTLLKEMASKGIEPSVVTFNAVISGCARN 580
Query: 596 DMSSVAYEWFHRIKVRSISPNEVSYELLIEALAKEGKPRLAYELYMRAKNDGLILSSKIY 655
+S VAYEWFHR+K ++ PNE++YE+LIEALA + KPRLAYEL+++A+N+GL LSSK Y
Sbjct: 581 GLSGVAYEWFHRMKSENVEPNEITYEMLIEALANDAKPRLAYELHVKAQNEGLKLSSKPY 640
Query: 656 DAVIESSQVYGADIDIRSLGPRPPDKKS 684
DAV++S++ YGA ID+ LGPR PDKK+
Sbjct: 641 DAVVKSAETYGATIDLNLLGPR-PDKKN 663
BLAST of Sed0025706 vs. TAIR 10
Match:
AT5G14350.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 158.3 bits (399), Expect = 2.2e-38
Identity = 89/202 (44.06%), Postives = 120/202 (59.41%), Query Frame = 0
Query: 410 LGKAKKWWAALEIYEDLLEKGPKPNNMSYELIVSHFNVLLTAAKKRGIWKWGVRLLNKME 469
L K + +ALE+YEDLL++GP+PNN+SYE +RL ++
Sbjct: 93 LKKLRNGGSALEMYEDLLDEGPEPNNLSYE---------------------PMRL--QLR 152
Query: 470 EKGLKPGSREWNAVLVACSKAAETSAAIEVFKRMVEQGEKPTVLSYGALLSALEKGKLYD 529
K +K +W TV S+GALLSALEKGKLYD
Sbjct: 153 PKSIK----QW----------------------------LTTVKSHGALLSALEKGKLYD 212
Query: 530 EARSVWDHMIKVGVKPNIYAYTTMASVFTGQGKFNMVEITLNDMVASG-IEPTVVTYNAI 589
E VW+HM+KVG++PN+YAYTTMASV TGQ K N+++ L +M + G I+P+VVTYNA+
Sbjct: 213 EVLRVWNHMVKVGIEPNLYAYTTMASVLTGQQKLNLLDTLLKEMPSKGIIKPSVVTYNAV 239
Query: 590 ITGCVRNDMSSVAYEWFHRIKV 611
I+GC RN +S VAYEWFHR+++
Sbjct: 273 ISGCTRNGLSGVAYEWFHRMRI 239
BLAST of Sed0025706 vs. TAIR 10
Match:
AT5G39710.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 129.8 bits (325), Expect = 8.4e-30
Identity = 123/502 (24.50%), Postives = 223/502 (44.42%), Query Frame = 0
Query: 164 VFSSIIRGFGRDKRLECAMALVEWLKRKKIETNGRISPNLFIYNSLLGA-VKQSGEISKL 223
VF +++ + R ++ A+++V + +G P + YN++L A ++ IS
Sbjct: 136 VFDLVVKSYSRLSLIDKALSIVH-----LAQAHG-FMPGVLSYNAVLDATIRSKRNISFA 195
Query: 224 EDVLNDMEQQGIVSNVVTYNTIMSIYLEKGLAVKALGILEEMPKKGLTLSPVSYSTALRA 283
E+V +M + + NV TYN ++ + G AL + ++M KG + V+Y+T +
Sbjct: 196 ENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDG 255
Query: 284 YRRMKDGNGALKFMVELRERYRNGEIAKDDNVDWADEFLKLENFTRRVCYQVMRIWLVKG 343
Y +++ + K LR G LE + Y V+ L +
Sbjct: 256 YCKLRKIDDGFKL---LRSMALKG----------------LE--PNLISYNVVINGLCR- 315
Query: 344 DSASTKVLQLLTEMDKAELSLDRAEEERLIWACTCAEHHNVAKELYYRIREKQSGISLSV 403
+ +V +LTEM++ SLD LI C E N + L + G++ SV
Sbjct: 316 EGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKG-YCKE-GNFHQALVMHAEMLRHGLTPSV 375
Query: 404 CNH--VIWLLGKAKKWWAALEIYEDLLEKGPKPNNMSYELIVSHFNVLLTAAKKRGIWKW 463
+ +I + KA A+E + + +G PN +Y +V F+ ++G
Sbjct: 376 ITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFS-------QKGYMNE 435
Query: 464 GVRLLNKMEEKGLKPGSREWNAVLVACSKAAETSAAIEVFKRMVEQGEKPTVLSYGALLS 523
R+L +M + G P +NA++ + AI V + M E+G P V+SY +LS
Sbjct: 436 AYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLS 495
Query: 524 ALEKGKLYDEARSVWDHMIKVGVKPNIYAYTTMASVFTGQGKFNMVEITLNDMVASGIEP 583
+ DEA V M++ G+KP+ Y+++ F Q + +M+ G+ P
Sbjct: 496 GFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPP 555
Query: 584 TVVTYNAIITG-CVRNDMSSVAYEWFHRIKVRSISPNEVSYELLIEALAKEGKPRLAYEL 643
TY A+I C+ D+ A + + + + + P+ V+Y +LI L K+ + R A L
Sbjct: 556 DEFTYTALINAYCMEGDLEK-ALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRL 599
Query: 644 YMRAKNDGLILSSKIYDAVIES 662
++ + + S Y +IE+
Sbjct: 616 LLKLFYEESVPSDVTYHTLIEN 599
BLAST of Sed0025706 vs. TAIR 10
Match:
AT1G09900.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )
HSP 1 Score: 128.6 bits (322), Expect = 1.9e-29
Identity = 122/491 (24.85%), Postives = 207/491 (42.16%), Query Frame = 0
Query: 201 PNLFIYNSLLGAVKQSGEISKLEDVLNDMEQQGIVSNVVTYNTIMSIYLEKGLAVKALGI 260
P++ +L+ + G+ K +L +E G V +V+TYN ++S Y + G AL +
Sbjct: 135 PDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSV 194
Query: 261 LEEMPKKGLTLSP--VSYSTALRAYRRMKDGNGALKFMVELRERYRNGEIAKDDNVDWAD 320
L+ M ++SP V+Y+T LR+ +G LK +E+ D
Sbjct: 195 LDRM-----SVSPDVVTYNTILRSL----CDSGKLKQAMEV-----------------LD 254
Query: 321 EFLKLENFTRRVCYQVMRIWLVKGDSASTKVLQLLTEMDKAELSLDRAEEERLIWACTCA 380
L+ + + + Y ++ I DS ++LL EM + D L+ C
Sbjct: 255 RMLQRDCYPDVITYTIL-IEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNG-ICK 314
Query: 381 EHHNVAKELYYRIREKQSGISLSVCNHVIWL--LGKAKKWWAALEIYEDLLEKGPKPNNM 440
E + + + + SG +V H I L + +W A ++ D+L KG P+
Sbjct: 315 E-GRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPS-- 374
Query: 441 SYELIVSHFNVLLTAAKKRGIWKWGVRLLNKMEEKGLKPGSREWNAVLVACSKAAETSAA 500
V FN+L+ ++G+ + +L KM + G +P S +N +L K + A
Sbjct: 375 -----VVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRA 434
Query: 501 IEVFKRMVEQGEKPTVLSYGALLSALEKGKLYDEARSVWDHMIKVGVKPNIYAYTTMASV 560
IE +RMV +G P +++Y +L+AL K ++A + + + G P + Y T+
Sbjct: 435 IEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDG 494
Query: 561 FTGQGKFNMVEITLNDMVASGIEPTVVTYNAIITGCVRNDMSSVAYEWFHRIK------- 620
GK L++M A ++P +TY++++ G R A ++FH +
Sbjct: 495 LAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPN 554
Query: 621 ----------------------------VRSISPNEVSYELLIEALAKEGKPRLAYELYM 653
R PNE SY +LIE LA EG + A EL
Sbjct: 555 AVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLN 589
BLAST of Sed0025706 vs. TAIR 10
Match:
AT2G18940.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 126.7 bits (317), Expect = 7.1e-29
Identity = 103/460 (22.39%), Postives = 196/460 (42.61%), Query Frame = 0
Query: 201 PNLFIYNSLLGAVKQSGEISKLEDVLNDMEQQGIVSNVVTYNTIMSIYLEKGLAVKALGI 260
P YN+LL ++G ++ VL +ME+ ++ VTYN +++ Y+ G + +A G+
Sbjct: 314 PGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGV 373
Query: 261 LEEMPKKGLTLSPVSYSTALRAYRRMKDGNGALKFMVELRER-------YRNGEIAKDDN 320
+E M KKG+ + ++Y+T + AY + + ALK ++E N ++
Sbjct: 374 IEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGK 433
Query: 321 VDWADEFLK-LENFTRRVCYQVMRIW----LVKGDSASTK-VLQLLTEMDKAELSLDRAE 380
++E +K L + C W + G+ K V ++ EM DR
Sbjct: 434 KSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDT 493
Query: 381 EERLIWACTCAEHHNVAKELYYRIREKQSGISLSVCNHVIWLLGKAKKWWAALEIYEDLL 440
LI A A ++Y + ++ N ++ L + W + + D+
Sbjct: 494 FNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMK 553
Query: 441 EKGPKPNNMSYELIVSHFNVLLTAAKKRGIWKWGVRLLNKMEEKGLKPGSREWNAVLVAC 500
KG KP SY L +L K G + R+ N+++E + P +L+A
Sbjct: 554 SKGFKPTETSYSL-------MLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLAN 613
Query: 501 SKAAETSAAIEVFKRMVEQGEKPTVLSYGALLSALEKGKLYDEARSVWDHMIKVGVKPNI 560
K + + F + G KP ++ + ++LS + +YD+A + + + + G+ P++
Sbjct: 614 FKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDL 673
Query: 561 YAYTTMASVFTGQGKFNMVEITLNDMVASGIEPTVVTYNAIITGCVRNDMSSVAYEWFHR 620
Y ++ ++ +G+ E L + S ++P +V+YN +I G R + A
Sbjct: 674 VTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSE 733
Query: 621 IKVRSISPNEVSYELLIEALAKEGK-PRLAYELYMRAKND 647
+ R I P +Y + G + + AKND
Sbjct: 734 MTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKND 766
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| KAG7022692.1 | 0.0e+00 | 82.38 | Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... | [more] |
| XP_022928295.1 | 0.0e+00 | 82.24 | pentatricopeptide repeat-containing protein At3g46610-like [Cucurbita moschata] | [more] |
| XP_022989603.1 | 0.0e+00 | 82.33 | pentatricopeptide repeat-containing protein At3g46610-like [Cucurbita maxima] | [more] |
| KAG6588925.1 | 0.0e+00 | 82.44 | Protein LOW PHOTOSYNTHETIC EFFICIENCY 1, chloroplastic, partial [Cucurbita argyr... | [more] |
| XP_038898205.1 | 0.0e+00 | 81.54 | protein LOW PHOTOSYNTHETIC EFFICIENCY 1, chloroplastic [Benincasa hispida] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Q9SNB7 | 6.1e-219 | 65.49 | Protein LOW PHOTOSYNTHETIC EFFICIENCY 1, chloroplastic OS=Arabidopsis thaliana O... | [more] |
| Q9FIX3 | 1.2e-28 | 24.50 | Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX... | [more] |
| Q3EDF8 | 2.6e-28 | 24.85 | Pentatricopeptide repeat-containing protein At1g09900 OS=Arabidopsis thaliana OX... | [more] |
| Q76C99 | 2.6e-28 | 21.66 | Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica OX=39946 GN=Rf1 PE=2 SV... | [more] |
| Q9LFC5 | 7.6e-28 | 22.76 | Pentatricopeptide repeat-containing protein At5g01110 OS=Arabidopsis thaliana OX... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A6J1ERB6 | 0.0e+00 | 82.24 | pentatricopeptide repeat-containing protein At3g46610-like OS=Cucurbita moschata... | [more] |
| A0A6J1JQT1 | 0.0e+00 | 82.33 | pentatricopeptide repeat-containing protein At3g46610-like OS=Cucurbita maxima O... | [more] |
| A0A0A0LB88 | 0.0e+00 | 80.81 | PPR_long domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G595200 PE... | [more] |
| A0A5D3E368 | 0.0e+00 | 80.81 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
| A0A6J1DL11 | 0.0e+00 | 80.17 | pentatricopeptide repeat-containing protein At3g46610 OS=Momordica charantia OX=... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT3G46610.1 | 4.3e-220 | 65.49 | Pentatricopeptide repeat (PPR-like) superfamily protein | [more] |
| AT5G14350.1 | 2.2e-38 | 44.06 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
| AT5G39710.1 | 8.4e-30 | 24.50 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
| AT1G09900.1 | 1.9e-29 | 24.85 | Pentatricopeptide repeat (PPR-like) superfamily protein | [more] |
| AT2G18940.1 | 7.1e-29 | 22.39 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
