Sed0025644 (gene) Chayote v1

Overview


Name	Sed0025644
Type	gene
Organism	Sechium edule (Chayote v1)
Description	CUE domain-containing protein
Location	LG11: 1266810 .. 1271700 (+)
RNA-Seq Expression	Sed0025644
Synteny	Sed0025644

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAAGAAAAGCAAATCCACAATGTGTAGCCAATAAACAACGAACACGTGTCAACCAAGGGAGAAAACCTCCTCATTCTTCTTTGTACGACGTGTCGTCTCCTCAATTATTCGTTATTTTAATCCCTTCGGCGAGAATTCGCAAACGACGATCGCACTCTTCGTAGCTATGAACGAAGATGAGCCAAAATCTCAGAGCCTCCATTGCTAAAACTTCATCTCTTTCCTGATTCAATTTCCATCCGAAAATCAGATCGTTGCAATTTCGTCCATCGTTGATGAAATCGAGAGGAGTTTAACCTAATTCGATCTGTTTTCTCGGTGTTTGACCTAATTTGTTCGTGGTGGAATTGGAATTTGAATCGTTGAAGATGATTTCGTTCGGATCTGGTGAAATTGCTGAATGAATTGGACGACGGAAGGTTTGGGTGCGGATCGAGCGCTTAGAGAGTAGAGGAAGCTGAGCAGCGGCGCTGAAACATGTCTGCCATCGTGTGCGGGAAGAGATCCTTATTTGAAGATCTGCCTACGCCTCCCGTGTCTAAGAGAATTCGTTGTTCCTCGTCTTCGCCTGTGCGGTTTTCGCCTCCCAGGTCATCGAATCAATCTGGTTTTCCGTTTCCCTCGACGTCGTCGTCGTCTTCGCAATCGGCTCATTTAGTCGATTATCTTGGCACTATTTTTCCTGATATGGATAAACAGGTCAGTTTTGGATATGCACCTTTTTGTTTCTTGTAAAGCTAAAATATAAGTTTAGTTATACAATTCAAAAGAAAGAAATTTTAGTCTTTATACTTCGAAGAAAGTTAGAATTTAGTCATATGATTCGAAGAAAGTTAAAGTTAGTCTATGTGTTATGTAAATGATAATCTACAATTGAAAACCTTAGAAGAAAAAGAAAAAACACAGAATTTACGTGGTTGTCTAATGTTGTGTTAGTGTTAGCTAGTCCGCAGATACATAATAGGCCCCAAAGTACATAAAAGTCAGCAGCTAGACTCCTGACTAACTAATCCTCGGGCATCCATTCGTTCAAGGAATATCTCAACAATATGAGTCAATGAAAGTTAAAAGTTAGTCCCTCGTTTTAAAAATTAGAATTTAGTCTCTGTGATTTTATAAAACCTTAAAATATAGCCCTTTTCGTAGGTAGTGGTTGACTTATTAAATACATAGAAATTCATTATTCTTGCATAAATAATATGATTTTTTGTTATATTAGTCACTTAACTCACCATTTCAATGTTAAGACATGAATAACTAAGTTTCAAGTACTTAATTCGCTATCGATTAGAAGTAGAAACGACAATCACTATTTTTTAGATTTTATGAAACTATAGGGACTAAATTCTAGTTTTTAAAATCATATGGATTAAATTCTATATTTTTTTAAACTATAGGTACTAAACTCTAGTTTTTTAAACAATGATGACTAAACTCTAAGTAGGGACTGAACTTATATTTTACCTTTCTCGTAATGAGGAATTATAAATTCTTTTGGATAAGAGAGGAATTATAAATTCAAAATGCTTTTATAAGGTAAATAATGTATGGAATGGATAGATGTTATCAATCATTGAAGCGTGTATCATTGGTGGGTTGTATTTTGAAGACGCTTCTGATGAATGAACTTTTGCATTTTTAATTCGAAGTAATTCGTACTTGAATGCGTTCTGATTGGTTTGAAATTGATATTTAGCTTTTAGAGAGAGCACTTGAAGAATGTGGTGATGATCTAGATTTAGCCATCAGAAGCTTGAACCAGCTTCATTTAGGGTACAATGACAGAAACTTGGGAAGTACTTCAAACACCTCCGATGTAGCTTTGGAAGCAAATATTCAACCTCCATCTCAAGGTTTGTGTTTAATATCTATTGATTTTTATATTGGACTTCGTAGTTATATTCTTGATCCTCTGAAATTGTTTTTATTTCCATATTTGTGGCACTAAAGTTTGGGAAGTTGAGCATTTTTAGACTGTTAGATCATTAACGAATGTGGAAGTCTGGTTACTCGATTAAGTCGACTTGGATTGACATCAGAGAGTGCCTACTAGGATCAACCTCGGTGATATAAAGCAGGGATTTCTCATTTATGACTTTGTCACACACACACACATATATATTATCTAAGCTCCTCATTGGCCAAGAGATTATTTTGTTATTATTTTTTGATATCCATGAGTGTTTGGGCCAGCTTATGCACACTTCGACTATTCTCACCGGACAATTGCCTGACCATACAACATTTGGCTGTCAAGAAGATTCTTTAGGAAATTAATTCCTAGGTAGGTGGTCACCATAGATGGAACCCATAACTTTTTGGTTCCTCAAGACCTTTTTGACCATTAAGCCAACCAATAGACTGATAGTTTGGAGAGAGATGATTGTTATTAGAATAACTAATAAAGGCAACTTTGCCGAGGTGATTTGTAACTTGTGGATTACCTCTTTTCCCTGTTGCCTATATTGTGTATGGTCAAATGTTGGGACAATGTAGGCTGACATCTCATAGATGATGTCTATTGTCTTAATTGTCCAAATTATTATAAAAAATATATCTTATTAGAATAACTAAAAAGGACAATTCCAGCATCCTTCATGGAAACTTGTCTTTGATTTGCCAATCAATGTTAGGACTTTGGATGCATACTTATTTGGGCTTTTTCTACAATATGATCTTAATAATAATGTTCCATTGTTTTCTGAGTTGAGTGGATTGGAGCAGTTTTCTGTAACTTTCACCCCTTGTTCGCCCACTCTCTTTTTCCAATTATCCTTTATTTCAACATGGTGAAGAGTACACCATAATGTATCTCTTTGTTATTCCTTCAAGGTCTCAGGTTCGAGACTCACCTGTGACATTACTCCTTCAATGTCTCCTGGTGATGTCTCTTGATGCCTGGCCTAGGGACGGGCATGGTTACCCTTGTTTCAAAAAAAAAAAATGTATCTCTCTATTAATTCCTTTTGAAACTAGTGGAAATGTCTTTTTTTTTTTTCATTTCATATTTCATATTTGTGCCTTTTAGGATATTTTATTTAGAGATACTGACATATTCAAGTAGGATTACTTATTAGCTTAACCATCTGCTTGGCTGCATATTATGTAGGCTATGAGACACCGTCAATTTAGTCTTTAATCTAAGCAATCCAAAAACATCTGTATAAGTGCTTGCAGATTATAAATTACAACAGTTTTGATTAAACGAGCATCTGTTTGAATTATACTTGCATTTTTCTTCTTTTGTCTTCTGGTGCTCTTAGATCCAGTTGTTGGTTGCATCTTGTGAATTTTTTGAATAATTAAGCAGAAACCCAAGGAGAAGCTGCAATTTCTGAGGAGGCAACAGCTTCTGAGAATCTCCCCACAAATGGGGCAGAATGGGTGGAACTCTTTGTGAGAGAAATGACAAGCGCGTCGAACATGGACGATGCACGAAGCCGTGCTTCAAGAGTTCTTGAGGTTCTGGAAAAGTCCATCTGTGCCCGTGCGAATGCCGAGGCAGCAAATAATTTTCACCAGGTTGTGGAACTGGAACGTTTACAATTTTTGCTACTTGTTTGTTTCCACTAAAATTTTGCGGACTTTAACATGTTATTTATTTTATATCAAATTTTAGGAAAACAAGATGCTTAGGGAACAAGTGGAAGCGCTAATTCAGGAAAACACTATTCTCAAACGTGCTGTCTCTATTCAGCATGAACGCCAGAAAGAATATGAAGGCAGAAACCAGGAGTTGGAACAGCTCAAAGAATTAGTCTCTCAATATCAGGAGCAGTTGAAAACCCTAGAGGTTGGTTCTTTATGCTCTTTGATCTTGCTTCTCGAGTTCTTAACATAATCCTCCTAGGTTGGCCTTGTGGTAGGTGGTCAATCGGTGAATTAAAGTTCTATGGATTTCTTTGACAATCAAATATAGCAGGTAGGTGTTCTTGTTAGATTAGTCGAGCTGCACGTAAGTTAGTTCAAACACTCATTTATGGATAAAAAATCTATCATTAACATAATTTTTGTATCGTCTCCCATAAGATAGCCTCATTGTTAGAGTTTTGATGTTTCCTAGATATGCTCTCTTAGGTCCTAAATTCGAAACTCACGATTGAGTGTAATTCTAAAATTCCTTGTCTTCTCGGTCTCTGCCATGAGACGGGCATGGGGAACCCCAGGTATGTATGGGGCAAAGCTTCAATTCTCGATTTAAAAAAAAAAATGAAAGCTTACGAGAACAGTCAAATTTAGAAAATAATTATAAATATGGTTACTTTTTAAAAAAAATTAGGATTAATGGGTATTGTCACCTATTTTTTTTATAATATTATTGTATTAGTGAATATTTATAATAAAATTTTAATACATATTAATTACAATAGATGTAAATATTTTAAAAGTTGTCTACTTTTGTAGAACCTATCCCATAGAATTTTCCTTCGAAAACATAATTTTTGTATAGTGTCTGCATACTTTTTGTCTGATATCTCTTGCATCTTCTAATGAACTACTAGGTGAACAACTATGCTCTTACAGTGCATCTCAAGCAAGCTCAACAAAGCAGCTCCATTCCAGGGCGTTTCCACCCTGACGTTTTCTAATCGGGATTCGATACATCGAAACTGCGGTAAACTCGATCCTCTGAATATTGTCCTATCAAATTAGCAAGATGATAAACTTGAACTTCAATCAATAACATGTTTGTGGGTTCCTCATTTTTTTAATCTAGAAAGTATAAAAGTGCCAAGGCATCTACTTTTCCATCCATCAGTACAGGGATTAACTCATTTTCTTTCTTTTTGTTGATTCTGTCTTGTTATTGGACTAAATTTGATTCTTAGAGATATTTAATTGTCTTTTCATTACCTGATTATAATTTGAAACTGATTGGGATCCAGAG

mRNA sequence

AAAAAAGAAAAGCAAATCCACAATGTGTAGCCAATAAACAACGAACACGTGTCAACCAAGGGAGAAAACCTCCTCATTCTTCTTTGTACGACGTGTCGTCTCCTCAATTATTCGTTATTTTAATCCCTTCGGCGAGAATTCGCAAACGACGATCGCACTCTTCGTAGCTATGAACGAAGATGAGCCAAAATCTCAGAGCCTCCATTGCTAAAACTTCATCTCTTTCCTGATTCAATTTCCATCCGAAAATCAGATCGTTGCAATTTCGTCCATCGTTGATGAAATCGAGAGGAGTTTAACCTAATTCGATCTGTTTTCTCGGTGTTTGACCTAATTTGTTCGTGGTGGAATTGGAATTTGAATCGTTGAAGATGATTTCGTTCGGATCTGGTGAAATTGCTGAATGAATTGGACGACGGAAGGTTTGGGTGCGGATCGAGCGCTTAGAGAGTAGAGGAAGCTGAGCAGCGGCGCTGAAACATGTCTGCCATCGTGTGCGGGAAGAGATCCTTATTTGAAGATCTGCCTACGCCTCCCGTGTCTAAGAGAATTCGTTGTTCCTCGTCTTCGCCTGTGCGGTTTTCGCCTCCCAGGTCATCGAATCAATCTGGTTTTCCGTTTCCCTCGACGTCGTCGTCGTCTTCGCAATCGGCTCATTTAGTCGATTATCTTGGCACTATTTTTCCTGATATGGATAAACAGCTTTTAGAGAGAGCACTTGAAGAATGTGGTGATGATCTAGATTTAGCCATCAGAAGCTTGAACCAGCTTCATTTAGGGTACAATGACAGAAACTTGGGAAGTACTTCAAACACCTCCGATGTAGCTTTGGAAGCAAATATTCAACCTCCATCTCAAGAAACCCAAGGAGAAGCTGCAATTTCTGAGGAGGCAACAGCTTCTGAGAATCTCCCCACAAATGGGGCAGAATGGGTGGAACTCTTTGTGAGAGAAATGACAAGCGCGTCGAACATGGACGATGCACGAAGCCGTGCTTCAAGAGTTCTTGAGGTTCTGGAAAAGTCCATCTGTGCCCGTGCGAATGCCGAGGCAGCAAATAATTTTCACCAGGAAAACAAGATGCTTAGGGAACAAGTGGAAGCGCTAATTCAGGAAAACACTATTCTCAAACGTGCTGTCTCTATTCAGCATGAACGCCAGAAAGAATATGAAGGCAGAAACCAGGAGTTGGAACAGCTCAAAGAATTAGTCTCTCAATATCAGGAGCAGTTGAAAACCCTAGAGGTGAACAACTATGCTCTTACAGTGCATCTCAAGCAAGCTCAACAAAGCAGCTCCATTCCAGGGCGTTTCCACCCTGACGTTTTCTAATCGGGATTCGATACATCGAAACTGCGGTAAACTCGATCCTCTGAATATTGTCCTATCAAATTAGCAAGATGATAAACTTGAACTTCAATCAATAACATGTTTGTGGGTTCCTCATTTTTTTAATCTAGAAAGTATAAAAGTGCCAAGGCATCTACTTTTCCATCCATCAGTACAGGGATTAACTCATTTTCTTTCTTTTTGTTGATTCTGTCTTGTTATTGGACTAAATTTGATTCTTAGAGATATTTAATTGTCTTTTCATTACCTGATTATAATTTGAAACTGATTGGGATCCAGAG

Coding sequence (CDS)

ATGTCTGCCATCGTGTGCGGGAAGAGATCCTTATTTGAAGATCTGCCTACGCCTCCCGTGTCTAAGAGAATTCGTTGTTCCTCGTCTTCGCCTGTGCGGTTTTCGCCTCCCAGGTCATCGAATCAATCTGGTTTTCCGTTTCCCTCGACGTCGTCGTCGTCTTCGCAATCGGCTCATTTAGTCGATTATCTTGGCACTATTTTTCCTGATATGGATAAACAGCTTTTAGAGAGAGCACTTGAAGAATGTGGTGATGATCTAGATTTAGCCATCAGAAGCTTGAACCAGCTTCATTTAGGGTACAATGACAGAAACTTGGGAAGTACTTCAAACACCTCCGATGTAGCTTTGGAAGCAAATATTCAACCTCCATCTCAAGAAACCCAAGGAGAAGCTGCAATTTCTGAGGAGGCAACAGCTTCTGAGAATCTCCCCACAAATGGGGCAGAATGGGTGGAACTCTTTGTGAGAGAAATGACAAGCGCGTCGAACATGGACGATGCACGAAGCCGTGCTTCAAGAGTTCTTGAGGTTCTGGAAAAGTCCATCTGTGCCCGTGCGAATGCCGAGGCAGCAAATAATTTTCACCAGGAAAACAAGATGCTTAGGGAACAAGTGGAAGCGCTAATTCAGGAAAACACTATTCTCAAACGTGCTGTCTCTATTCAGCATGAACGCCAGAAAGAATATGAAGGCAGAAACCAGGAGTTGGAACAGCTCAAAGAATTAGTCTCTCAATATCAGGAGCAGTTGAAAACCCTAGAGGTGAACAACTATGCTCTTACAGTGCATCTCAAGCAAGCTCAACAAAGCAGCTCCATTCCAGGGCGTTTCCACCCTGACGTTTTCTAA

Protein sequence

MSAIVCGKRSLFEDLPTPPVSKRIRCSSSSPVRFSPPRSSNQSGFPFPSTSSSSSQSAHLVDYLGTIFPDMDKQLLERALEECGDDLDLAIRSLNQLHLGYNDRNLGSTSNTSDVALEANIQPPSQETQGEAAISEEATASENLPTNGAEWVELFVREMTSASNMDDARSRASRVLEVLEKSICARANAEAANNFHQENKMLREQVEALIQENTILKRAVSIQHERQKEYEGRNQELEQLKELVSQYQEQLKTLEVNNYALTVHLKQAQQSSSIPGRFHPDVF

Homology

[Close]

BLAST of Sed0025644 vs. NCBI nr
Match: XP_022937652.1 (uncharacterized protein LOC111443991 isoform X2 [Cucurbita moschata] >XP_023537696.1 uncharacterized protein LOC111798649 isoform X2 [Cucurbita pepo subsp. pepo] >KAG6586378.1 hypothetical protein SDJN03_19111, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 505.4 bits (1300), Expect = 3.3e-139
Identity = 269/283 (95.05%), Postives = 274/283 (96.82%), Query Frame = 0


Query: 1   MSAIVCGKRSLFEDLPTPPVSKRIRCSSSSPVRFSPPRSSNQSGFPFPSTSSSSSQSAHL 60
           MSAIVCGKRSLFEDLPTPPVSKRIRCSSSSPVRFSPPRSSNQS FPFP T  SSSQSAHL
Sbjct: 1   MSAIVCGKRSLFEDLPTPPVSKRIRCSSSSPVRFSPPRSSNQSAFPFPPT--SSSQSAHL 60

Query: 61  VDYLGTIFPDMDKQLLERALEECGDDLDLAIRSLNQLHLGYNDRNLGSTSNTSDVALEAN 120
           VDYL  IFPDMDKQLLERALEECGDDLDLAIRSLNQLHLGYNDRNLGS+SNTSDVALEAN
Sbjct: 61  VDYLSAIFPDMDKQLLERALEECGDDLDLAIRSLNQLHLGYNDRNLGSSSNTSDVALEAN 120

Query: 121 IQPPSQETQGEAAISEEATASENLPTNGAEWVELFVREMTSASNMDDARSRASRVLEVLE 180
           IQP SQETQGEAAI+EEATASENLPTNGAEWVELFVREMTSASNMDDARSRASRVLEVLE
Sbjct: 121 IQPQSQETQGEAAIAEEATASENLPTNGAEWVELFVREMTSASNMDDARSRASRVLEVLE 180

Query: 181 KSICARANAEAANNFHQENKMLREQVEALIQENTILKRAVSIQHERQKEYEGRNQELEQL 240
           KSICARANAEAANNF QENKMLREQVEALIQENTILKRAVSIQHERQKEYEGRNQEL+ L
Sbjct: 181 KSICARANAEAANNFQQENKMLREQVEALIQENTILKRAVSIQHERQKEYEGRNQELQHL 240

Query: 241 KELVSQYQEQLKTLEVNNYALTVHLKQAQQSSSIPGRFHPDVF 284
           KELV+QYQEQLKTLEVNNYALT+HLKQAQQSSSIPGRFHPDVF
Sbjct: 241 KELVAQYQEQLKTLEVNNYALTMHLKQAQQSSSIPGRFHPDVF 281

[Close]

BLAST of Sed0025644 vs. NCBI nr
Match: XP_038890913.1 (uncharacterized protein LOC120080344 [Benincasa hispida])

HSP 1 Score: 501.1 bits (1289), Expect = 6.1e-138
Identity = 268/283 (94.70%), Postives = 272/283 (96.11%), Query Frame = 0


Query: 1   MSAIVCGKRSLFEDLPTPPVSKRIRCSSSSPVRFSPPRSSNQSGFPFPSTSSSSSQSAHL 60
           MSAIVCGKRSLFEDLPTPPVSKRIRCSSSSPVRFSPPRSSNQS  PFP T  SSSQSAHL
Sbjct: 1   MSAIVCGKRSLFEDLPTPPVSKRIRCSSSSPVRFSPPRSSNQSVSPFPQT--SSSQSAHL 60

Query: 61  VDYLGTIFPDMDKQLLERALEECGDDLDLAIRSLNQLHLGYNDRNLGSTSNTSDVALEAN 120
           VDYL  IFPDMDKQLLERALEECGDDLDLAIRSLNQLHLGYNDRNLGS SNTSDVALEAN
Sbjct: 61  VDYLRAIFPDMDKQLLERALEECGDDLDLAIRSLNQLHLGYNDRNLGSASNTSDVALEAN 120

Query: 121 IQPPSQETQGEAAISEEATASENLPTNGAEWVELFVREMTSASNMDDARSRASRVLEVLE 180
           IQP SQETQGEAAI+E+ATASENLPTNGAEWV+LFV EMTSASNMDDARSRASRVLEVLE
Sbjct: 121 IQPQSQETQGEAAIAEDATASENLPTNGAEWVDLFVSEMTSASNMDDARSRASRVLEVLE 180

Query: 181 KSICARANAEAANNFHQENKMLREQVEALIQENTILKRAVSIQHERQKEYEGRNQELEQL 240
           KSICARANAEAANNFHQENKMLREQVEALIQENTILKRAVSIQHERQKEYEGRNQEL+ L
Sbjct: 181 KSICARANAEAANNFHQENKMLREQVEALIQENTILKRAVSIQHERQKEYEGRNQELQHL 240

Query: 241 KELVSQYQEQLKTLEVNNYALTVHLKQAQQSSSIPGRFHPDVF 284
           KELVSQYQEQLKTLEVNNYALTVHLKQAQQSSSIPGRFHPDVF
Sbjct: 241 KELVSQYQEQLKTLEVNNYALTVHLKQAQQSSSIPGRFHPDVF 281

[Close]

BLAST of Sed0025644 vs. NCBI nr
Match: XP_022937649.1 (uncharacterized protein LOC111443991 isoform X1 [Cucurbita moschata] >XP_022937650.1 uncharacterized protein LOC111443991 isoform X1 [Cucurbita moschata] >XP_023537695.1 uncharacterized protein LOC111798649 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 500.7 bits (1288), Expect = 8.0e-138
Identity = 269/284 (94.72%), Postives = 274/284 (96.48%), Query Frame = 0


Query: 1   MSAIVCGKRSLFEDLPTPPVSKRIRCSSSSPVRFSPPRSSNQSGFPFPSTSSSSSQSAHL 60
           MSAIVCGKRSLFEDLPTPPVSKRIRCSSSSPVRFSPPRSSNQS FPFP T  SSSQSAHL
Sbjct: 1   MSAIVCGKRSLFEDLPTPPVSKRIRCSSSSPVRFSPPRSSNQSAFPFPPT--SSSQSAHL 60

Query: 61  VDYLGTIFPDMDKQLLERALEECGDDLDLAIRSLNQLHLGYNDRNLGSTSNTSDVALEAN 120
           VDYL  IFPDMDKQLLERALEECGDDLDLAIRSLNQLHLGYNDRNLGS+SNTSDVALEAN
Sbjct: 61  VDYLSAIFPDMDKQLLERALEECGDDLDLAIRSLNQLHLGYNDRNLGSSSNTSDVALEAN 120

Query: 121 IQPPSQ-ETQGEAAISEEATASENLPTNGAEWVELFVREMTSASNMDDARSRASRVLEVL 180
           IQP SQ ETQGEAAI+EEATASENLPTNGAEWVELFVREMTSASNMDDARSRASRVLEVL
Sbjct: 121 IQPQSQAETQGEAAIAEEATASENLPTNGAEWVELFVREMTSASNMDDARSRASRVLEVL 180

Query: 181 EKSICARANAEAANNFHQENKMLREQVEALIQENTILKRAVSIQHERQKEYEGRNQELEQ 240
           EKSICARANAEAANNF QENKMLREQVEALIQENTILKRAVSIQHERQKEYEGRNQEL+ 
Sbjct: 181 EKSICARANAEAANNFQQENKMLREQVEALIQENTILKRAVSIQHERQKEYEGRNQELQH 240

Query: 241 LKELVSQYQEQLKTLEVNNYALTVHLKQAQQSSSIPGRFHPDVF 284
           LKELV+QYQEQLKTLEVNNYALT+HLKQAQQSSSIPGRFHPDVF
Sbjct: 241 LKELVAQYQEQLKTLEVNNYALTMHLKQAQQSSSIPGRFHPDVF 282

[Close]

BLAST of Sed0025644 vs. NCBI nr
Match: XP_022965877.1 (uncharacterized protein LOC111465630 isoform X2 [Cucurbita maxima])

HSP 1 Score: 499.6 bits (1285), Expect = 1.8e-137
Identity = 267/283 (94.35%), Postives = 271/283 (95.76%), Query Frame = 0


Query: 1   MSAIVCGKRSLFEDLPTPPVSKRIRCSSSSPVRFSPPRSSNQSGFPFPSTSSSSSQSAHL 60
           MSAIVCGKRSLFEDLPTPPVSKRIRCSSSSPVRFSPPRSSNQS FPFP T  SSSQSAHL
Sbjct: 1   MSAIVCGKRSLFEDLPTPPVSKRIRCSSSSPVRFSPPRSSNQSAFPFPPT--SSSQSAHL 60

Query: 61  VDYLGTIFPDMDKQLLERALEECGDDLDLAIRSLNQLHLGYNDRNLGSTSNTSDVALEAN 120
           VDYL  IFPDMDKQLLERALEE GDDLDLAIRSLNQLHLGYNDRNLGS SNTSDVALEAN
Sbjct: 61  VDYLSAIFPDMDKQLLERALEESGDDLDLAIRSLNQLHLGYNDRNLGSASNTSDVALEAN 120

Query: 121 IQPPSQETQGEAAISEEATASENLPTNGAEWVELFVREMTSASNMDDARSRASRVLEVLE 180
           IQP SQETQGEAAI+EEATASENLPTNGAEWVELFVREMTSASNMDDARSRASRVLEVLE
Sbjct: 121 IQPQSQETQGEAAIAEEATASENLPTNGAEWVELFVREMTSASNMDDARSRASRVLEVLE 180

Query: 181 KSICARANAEAANNFHQENKMLREQVEALIQENTILKRAVSIQHERQKEYEGRNQELEQL 240
           KSICARANAEA NNF QENKMLREQVEALIQENTILKRAVSIQHERQKEYEGRNQEL+ L
Sbjct: 181 KSICARANAEATNNFQQENKMLREQVEALIQENTILKRAVSIQHERQKEYEGRNQELQHL 240

Query: 241 KELVSQYQEQLKTLEVNNYALTVHLKQAQQSSSIPGRFHPDVF 284
           KELV+QYQEQLKTLEVNNYALT+HLKQAQQSSSIPGRFHPDVF
Sbjct: 241 KELVAQYQEQLKTLEVNNYALTMHLKQAQQSSSIPGRFHPDVF 281

[Close]

BLAST of Sed0025644 vs. NCBI nr
Match: XP_022965876.1 (uncharacterized protein LOC111465630 isoform X1 [Cucurbita maxima])

HSP 1 Score: 495.0 bits (1273), Expect = 4.4e-136
Identity = 267/284 (94.01%), Postives = 271/284 (95.42%), Query Frame = 0


Query: 1   MSAIVCGKRSLFEDLPTPPVSKRIRCSSSSPVRFSPPRSSNQSGFPFPSTSSSSSQSAHL 60
           MSAIVCGKRSLFEDLPTPPVSKRIRCSSSSPVRFSPPRSSNQS FPFP T  SSSQSAHL
Sbjct: 1   MSAIVCGKRSLFEDLPTPPVSKRIRCSSSSPVRFSPPRSSNQSAFPFPPT--SSSQSAHL 60

Query: 61  VDYLGTIFPDMDKQLLERALEECGDDLDLAIRSLNQLHLGYNDRNLGSTSNTSDVALEAN 120
           VDYL  IFPDMDKQLLERALEE GDDLDLAIRSLNQLHLGYNDRNLGS SNTSDVALEAN
Sbjct: 61  VDYLSAIFPDMDKQLLERALEESGDDLDLAIRSLNQLHLGYNDRNLGSASNTSDVALEAN 120

Query: 121 IQPPSQ-ETQGEAAISEEATASENLPTNGAEWVELFVREMTSASNMDDARSRASRVLEVL 180
           IQP SQ ETQGEAAI+EEATASENLPTNGAEWVELFVREMTSASNMDDARSRASRVLEVL
Sbjct: 121 IQPQSQAETQGEAAIAEEATASENLPTNGAEWVELFVREMTSASNMDDARSRASRVLEVL 180

Query: 181 EKSICARANAEAANNFHQENKMLREQVEALIQENTILKRAVSIQHERQKEYEGRNQELEQ 240
           EKSICARANAEA NNF QENKMLREQVEALIQENTILKRAVSIQHERQKEYEGRNQEL+ 
Sbjct: 181 EKSICARANAEATNNFQQENKMLREQVEALIQENTILKRAVSIQHERQKEYEGRNQELQH 240

Query: 241 LKELVSQYQEQLKTLEVNNYALTVHLKQAQQSSSIPGRFHPDVF 284
           LKELV+QYQEQLKTLEVNNYALT+HLKQAQQSSSIPGRFHPDVF
Sbjct: 241 LKELVAQYQEQLKTLEVNNYALTMHLKQAQQSSSIPGRFHPDVF 282

[Close]

BLAST of Sed0025644 vs. ExPASy TrEMBL
Match: A0A6J1FBU0 (uncharacterized protein LOC111443991 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111443991 PE=4 SV=1)

HSP 1 Score: 505.4 bits (1300), Expect = 1.6e-139
Identity = 269/283 (95.05%), Postives = 274/283 (96.82%), Query Frame = 0


Query: 1   MSAIVCGKRSLFEDLPTPPVSKRIRCSSSSPVRFSPPRSSNQSGFPFPSTSSSSSQSAHL 60
           MSAIVCGKRSLFEDLPTPPVSKRIRCSSSSPVRFSPPRSSNQS FPFP T  SSSQSAHL
Sbjct: 1   MSAIVCGKRSLFEDLPTPPVSKRIRCSSSSPVRFSPPRSSNQSAFPFPPT--SSSQSAHL 60

Query: 61  VDYLGTIFPDMDKQLLERALEECGDDLDLAIRSLNQLHLGYNDRNLGSTSNTSDVALEAN 120
           VDYL  IFPDMDKQLLERALEECGDDLDLAIRSLNQLHLGYNDRNLGS+SNTSDVALEAN
Sbjct: 61  VDYLSAIFPDMDKQLLERALEECGDDLDLAIRSLNQLHLGYNDRNLGSSSNTSDVALEAN 120

Query: 121 IQPPSQETQGEAAISEEATASENLPTNGAEWVELFVREMTSASNMDDARSRASRVLEVLE 180
           IQP SQETQGEAAI+EEATASENLPTNGAEWVELFVREMTSASNMDDARSRASRVLEVLE
Sbjct: 121 IQPQSQETQGEAAIAEEATASENLPTNGAEWVELFVREMTSASNMDDARSRASRVLEVLE 180

Query: 181 KSICARANAEAANNFHQENKMLREQVEALIQENTILKRAVSIQHERQKEYEGRNQELEQL 240
           KSICARANAEAANNF QENKMLREQVEALIQENTILKRAVSIQHERQKEYEGRNQEL+ L
Sbjct: 181 KSICARANAEAANNFQQENKMLREQVEALIQENTILKRAVSIQHERQKEYEGRNQELQHL 240

Query: 241 KELVSQYQEQLKTLEVNNYALTVHLKQAQQSSSIPGRFHPDVF 284
           KELV+QYQEQLKTLEVNNYALT+HLKQAQQSSSIPGRFHPDVF
Sbjct: 241 KELVAQYQEQLKTLEVNNYALTMHLKQAQQSSSIPGRFHPDVF 281

[Close]

BLAST of Sed0025644 vs. ExPASy TrEMBL
Match: A0A6J1FBT3 (uncharacterized protein LOC111443991 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111443991 PE=4 SV=1)

HSP 1 Score: 500.7 bits (1288), Expect = 3.9e-138
Identity = 269/284 (94.72%), Postives = 274/284 (96.48%), Query Frame = 0


Query: 1   MSAIVCGKRSLFEDLPTPPVSKRIRCSSSSPVRFSPPRSSNQSGFPFPSTSSSSSQSAHL 60
           MSAIVCGKRSLFEDLPTPPVSKRIRCSSSSPVRFSPPRSSNQS FPFP T  SSSQSAHL
Sbjct: 1   MSAIVCGKRSLFEDLPTPPVSKRIRCSSSSPVRFSPPRSSNQSAFPFPPT--SSSQSAHL 60

Query: 61  VDYLGTIFPDMDKQLLERALEECGDDLDLAIRSLNQLHLGYNDRNLGSTSNTSDVALEAN 120
           VDYL  IFPDMDKQLLERALEECGDDLDLAIRSLNQLHLGYNDRNLGS+SNTSDVALEAN
Sbjct: 61  VDYLSAIFPDMDKQLLERALEECGDDLDLAIRSLNQLHLGYNDRNLGSSSNTSDVALEAN 120

Query: 121 IQPPSQ-ETQGEAAISEEATASENLPTNGAEWVELFVREMTSASNMDDARSRASRVLEVL 180
           IQP SQ ETQGEAAI+EEATASENLPTNGAEWVELFVREMTSASNMDDARSRASRVLEVL
Sbjct: 121 IQPQSQAETQGEAAIAEEATASENLPTNGAEWVELFVREMTSASNMDDARSRASRVLEVL 180

Query: 181 EKSICARANAEAANNFHQENKMLREQVEALIQENTILKRAVSIQHERQKEYEGRNQELEQ 240
           EKSICARANAEAANNF QENKMLREQVEALIQENTILKRAVSIQHERQKEYEGRNQEL+ 
Sbjct: 181 EKSICARANAEAANNFQQENKMLREQVEALIQENTILKRAVSIQHERQKEYEGRNQELQH 240

Query: 241 LKELVSQYQEQLKTLEVNNYALTVHLKQAQQSSSIPGRFHPDVF 284
           LKELV+QYQEQLKTLEVNNYALT+HLKQAQQSSSIPGRFHPDVF
Sbjct: 241 LKELVAQYQEQLKTLEVNNYALTMHLKQAQQSSSIPGRFHPDVF 282

[Close]

BLAST of Sed0025644 vs. ExPASy TrEMBL
Match: A0A6J1HLH7 (uncharacterized protein LOC111465630 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111465630 PE=4 SV=1)

HSP 1 Score: 499.6 bits (1285), Expect = 8.6e-138
Identity = 267/283 (94.35%), Postives = 271/283 (95.76%), Query Frame = 0


Query: 1   MSAIVCGKRSLFEDLPTPPVSKRIRCSSSSPVRFSPPRSSNQSGFPFPSTSSSSSQSAHL 60
           MSAIVCGKRSLFEDLPTPPVSKRIRCSSSSPVRFSPPRSSNQS FPFP T  SSSQSAHL
Sbjct: 1   MSAIVCGKRSLFEDLPTPPVSKRIRCSSSSPVRFSPPRSSNQSAFPFPPT--SSSQSAHL 60

Query: 61  VDYLGTIFPDMDKQLLERALEECGDDLDLAIRSLNQLHLGYNDRNLGSTSNTSDVALEAN 120
           VDYL  IFPDMDKQLLERALEE GDDLDLAIRSLNQLHLGYNDRNLGS SNTSDVALEAN
Sbjct: 61  VDYLSAIFPDMDKQLLERALEESGDDLDLAIRSLNQLHLGYNDRNLGSASNTSDVALEAN 120

Query: 121 IQPPSQETQGEAAISEEATASENLPTNGAEWVELFVREMTSASNMDDARSRASRVLEVLE 180
           IQP SQETQGEAAI+EEATASENLPTNGAEWVELFVREMTSASNMDDARSRASRVLEVLE
Sbjct: 121 IQPQSQETQGEAAIAEEATASENLPTNGAEWVELFVREMTSASNMDDARSRASRVLEVLE 180

Query: 181 KSICARANAEAANNFHQENKMLREQVEALIQENTILKRAVSIQHERQKEYEGRNQELEQL 240
           KSICARANAEA NNF QENKMLREQVEALIQENTILKRAVSIQHERQKEYEGRNQEL+ L
Sbjct: 181 KSICARANAEATNNFQQENKMLREQVEALIQENTILKRAVSIQHERQKEYEGRNQELQHL 240

Query: 241 KELVSQYQEQLKTLEVNNYALTVHLKQAQQSSSIPGRFHPDVF 284
           KELV+QYQEQLKTLEVNNYALT+HLKQAQQSSSIPGRFHPDVF
Sbjct: 241 KELVAQYQEQLKTLEVNNYALTMHLKQAQQSSSIPGRFHPDVF 281

[Close]

BLAST of Sed0025644 vs. ExPASy TrEMBL
Match: A0A6J1HMV5 (uncharacterized protein LOC111465630 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111465630 PE=4 SV=1)

HSP 1 Score: 495.0 bits (1273), Expect = 2.1e-136
Identity = 267/284 (94.01%), Postives = 271/284 (95.42%), Query Frame = 0


Query: 1   MSAIVCGKRSLFEDLPTPPVSKRIRCSSSSPVRFSPPRSSNQSGFPFPSTSSSSSQSAHL 60
           MSAIVCGKRSLFEDLPTPPVSKRIRCSSSSPVRFSPPRSSNQS FPFP T  SSSQSAHL
Sbjct: 1   MSAIVCGKRSLFEDLPTPPVSKRIRCSSSSPVRFSPPRSSNQSAFPFPPT--SSSQSAHL 60

Query: 61  VDYLGTIFPDMDKQLLERALEECGDDLDLAIRSLNQLHLGYNDRNLGSTSNTSDVALEAN 120
           VDYL  IFPDMDKQLLERALEE GDDLDLAIRSLNQLHLGYNDRNLGS SNTSDVALEAN
Sbjct: 61  VDYLSAIFPDMDKQLLERALEESGDDLDLAIRSLNQLHLGYNDRNLGSASNTSDVALEAN 120

Query: 121 IQPPSQ-ETQGEAAISEEATASENLPTNGAEWVELFVREMTSASNMDDARSRASRVLEVL 180
           IQP SQ ETQGEAAI+EEATASENLPTNGAEWVELFVREMTSASNMDDARSRASRVLEVL
Sbjct: 121 IQPQSQAETQGEAAIAEEATASENLPTNGAEWVELFVREMTSASNMDDARSRASRVLEVL 180

Query: 181 EKSICARANAEAANNFHQENKMLREQVEALIQENTILKRAVSIQHERQKEYEGRNQELEQ 240
           EKSICARANAEA NNF QENKMLREQVEALIQENTILKRAVSIQHERQKEYEGRNQEL+ 
Sbjct: 181 EKSICARANAEATNNFQQENKMLREQVEALIQENTILKRAVSIQHERQKEYEGRNQELQH 240

Query: 241 LKELVSQYQEQLKTLEVNNYALTVHLKQAQQSSSIPGRFHPDVF 284
           LKELV+QYQEQLKTLEVNNYALT+HLKQAQQSSSIPGRFHPDVF
Sbjct: 241 LKELVAQYQEQLKTLEVNNYALTMHLKQAQQSSSIPGRFHPDVF 282

[Close]

BLAST of Sed0025644 vs. ExPASy TrEMBL
Match: A0A5D3BFF3 (CUE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold285G00690 PE=4 SV=1)

HSP 1 Score: 494.6 bits (1272), Expect = 2.8e-136
Identity = 263/283 (92.93%), Postives = 272/283 (96.11%), Query Frame = 0


Query: 1   MSAIVCGKRSLFEDLPTPPVSKRIRCSSSSPVRFSPPRSSNQSGFPFPSTSSSSSQSAHL 60
           MSAIVCGKRSLFEDLPTPPVSKRIRCSSSSPVRFSPPRSSNQS  PFP T  SSSQSA+L
Sbjct: 1   MSAIVCGKRSLFEDLPTPPVSKRIRCSSSSPVRFSPPRSSNQSVSPFPQT--SSSQSAYL 60

Query: 61  VDYLGTIFPDMDKQLLERALEECGDDLDLAIRSLNQLHLGYNDRNLGSTSNTSDVALEAN 120
           VDYL  IFPDMDKQLLERALEECGDDLDLAIRSLNQLHLGYNDRNLGS SN+SDVALEAN
Sbjct: 61  VDYLRAIFPDMDKQLLERALEECGDDLDLAIRSLNQLHLGYNDRNLGSASNSSDVALEAN 120

Query: 121 IQPPSQETQGEAAISEEATASENLPTNGAEWVELFVREMTSASNMDDARSRASRVLEVLE 180
           +QP SQ+TQGEAAI+E+ATASENLPTNGAEWV+LFV EMTSASNMDDARSRASRVLEVLE
Sbjct: 121 VQPQSQDTQGEAAIAEDATASENLPTNGAEWVDLFVNEMTSASNMDDARSRASRVLEVLE 180

Query: 181 KSICARANAEAANNFHQENKMLREQVEALIQENTILKRAVSIQHERQKEYEGRNQELEQL 240
           KSICARANAEAANNFHQENKMLREQVEALIQENTILKRAVSIQHERQKE+EGRNQEL+ L
Sbjct: 181 KSICARANAEAANNFHQENKMLREQVEALIQENTILKRAVSIQHERQKEFEGRNQELQHL 240

Query: 241 KELVSQYQEQLKTLEVNNYALTVHLKQAQQSSSIPGRFHPDVF 284
           KELVSQYQEQLKTLEVNNYALTVHLKQAQQSSSIPGRFHPDVF
Sbjct: 241 KELVSQYQEQLKTLEVNNYALTVHLKQAQQSSSIPGRFHPDVF 281

[Close]

BLAST of Sed0025644 vs. TAIR 10
Match: AT5G32440.1 (Ubiquitin system component Cue protein )

HSP 1 Score: 288.5 bits (737), Expect = 5.8e-78
Identity = 169/286 (59.09%), Postives = 209/286 (73.08%), Query Frame = 0


Query: 1   MSAIVCGKRSLFEDL--PTPPVSKRIRC-SSSSPVRFSPPRSSNQSGFPFPSTSSSSSQS 60
           MSAIVCGKRSLFEDL   +PPVSK++RC SSSS  RFSP         P P +SS     
Sbjct: 1   MSAIVCGKRSLFEDLAAASPPVSKKLRCFSSSSSSRFSP---------PIPPSSSL---- 60

Query: 61  AHLVDYLGTIFPDMDKQLLERALEECGDDLDLAIRSLNQLHLGYNDRNLGSTSNTSDVAL 120
             L+D+L  IFPDMDKQ+LERA+EECGDDLD AIR LNQL L   ++N  S +N S V  
Sbjct: 61  --LLDHLAAIFPDMDKQILERAIEECGDDLDSAIRCLNQLRLESANKNSDSATNQSPVV- 120

Query: 121 EANIQPPSQETQGEAAISEEATASENLPTNGAEWVELFVREMTSASNMDDARSRASRVLE 180
              IQ P+ E Q + +  EE      L  +G EWVELFVREM +AS+M DA++RA+R LE
Sbjct: 121 ---IQEPNVEPQQQGSAKEEPNV---LNLDGTEWVELFVREMMNASDMKDAKARAARALE 180

Query: 181 VLEKSICARANAEAANNFHQENKMLREQVEALIQENTILKRAVSIQHERQKEYEGRNQEL 240
            LEKSI AR   +A  N  QEN ML++Q+EA++QEN++LKRAV  Q +RQ+E E ++QEL
Sbjct: 181 ALEKSINARTGTDAMQNLQQENMMLKQQLEAIVQENSLLKRAVVTQQKRQRESEDQSQEL 240

Query: 241 EQLKELVSQYQEQLKTLEVNNYALTVHLKQAQQSSSIPGRFHPDVF 284
           + L++LV+QYQEQL+TLEVNNYALT+HLKQAQQ+SSIPGR+HPDVF
Sbjct: 241 QHLRQLVTQYQEQLRTLEVNNYALTLHLKQAQQNSSIPGRYHPDVF 264

[Close]

BLAST of Sed0025644 vs. TAIR 10
Match: AT5G32440.3 (Ubiquitin system component Cue protein )

HSP 1 Score: 287.0 bits (733), Expect = 1.7e-77
Identity = 169/287 (58.89%), Postives = 211/287 (73.52%), Query Frame = 0


Query: 1   MSAIVCGKRSLFEDL--PTPPVSKRIRC-SSSSPVRFSPPRSSNQSGFPFPSTSSSSSQS 60
           MSAIVCGKRSLFEDL   +PPVSK++RC SSSS  RFSP         P P +SS     
Sbjct: 1   MSAIVCGKRSLFEDLAAASPPVSKKLRCFSSSSSSRFSP---------PIPPSSSL---- 60

Query: 61  AHLVDYLGTIFPDMDKQLLERALEECGDDLDLAIRSLNQLHLGYNDRNLGSTSNTSDVAL 120
             L+D+L  IFPDMDKQ+LERA+EECGDDLD AIR LNQL L   ++N  S +N S V +
Sbjct: 61  --LLDHLAAIFPDMDKQILERAIEECGDDLDSAIRCLNQLRLESANKNSDSATNQSPVVI 120

Query: 121 -EANIQPPSQETQGEAAISEEATASENLPTNGAEWVELFVREMTSASNMDDARSRASRVL 180
            E N++P   + QG +A  E       L  +G EWVELFVREM +AS+M DA++RA+R L
Sbjct: 121 QEPNVEP---QQQGRSAKEEPNV----LNLDGTEWVELFVREMMNASDMKDAKARAARAL 180

Query: 181 EVLEKSICARANAEAANNFHQENKMLREQVEALIQENTILKRAVSIQHERQKEYEGRNQE 240
           E LEKSI AR   +A  N  QEN ML++Q+EA++QEN++LKRAV  Q +RQ+E E ++QE
Sbjct: 181 EALEKSINARTGTDAMQNLQQENMMLKQQLEAIVQENSLLKRAVVTQQKRQRESEDQSQE 240

Query: 241 LEQLKELVSQYQEQLKTLEVNNYALTVHLKQAQQSSSIPGRFHPDVF 284
           L+ L++LV+QYQEQL+TLEVNNYALT+HLKQAQQ+SSIPGR+HPDVF
Sbjct: 241 LQHLRQLVTQYQEQLRTLEVNNYALTLHLKQAQQNSSIPGRYHPDVF 265

[Close]

BLAST of Sed0025644 vs. TAIR 10
Match: AT1G80040.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin system component Cue (InterPro:IPR003892); BEST Arabidopsis thaliana protein match is: Ubiquitin system component Cue protein (TAIR:AT5G32440.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 194.1 bits (492), Expect = 1.5e-49
Identity = 124/286 (43.36%), Postives = 168/286 (58.74%), Query Frame = 0


Query: 1   MSAIVCG-KRSLFEDLPTPPVSKRIRC--SSSSPVRFSPPRSSNQSGFPFPSTSSSSSQS 60
           MSA+ CG KRS F+D  +PP SKR RC   S+SP+  SPP SS                 
Sbjct: 1   MSAVYCGTKRSYFDDNSSPPSSKRFRCFSPSNSPIWSSPPSSS----------------- 60

Query: 61  AHLVDYLGTIFPDMDKQLLERALEECGDDLDLAIRSLNQLHLGYNDRNLGSTSNTSDVAL 120
              +D L + FP ++  +L +ALE+ G D + A++SL          +  S+       L
Sbjct: 61  ---LDQLHSAFPHIELTVLVKALEDNGSDFNAAMKSL---------YSFASSEEKKAEEL 120

Query: 121 EANIQPPSQETQGEAAISEEATASENLPTNGAEWVELFVREMTSASNMDDARSRASRVLE 180
            A          G A    +A    N PT+G +WVEL VRE+  +S  DDA+ RA+RVLE
Sbjct: 121 AAG---------GAATQETDAVCGGNPPTSGDDWVELLVREVLQSSGTDDAKVRAARVLE 180

Query: 181 VLEKSICARANAEAANNFHQENKMLREQVEALIQENTILKRAVSIQHERQKEYEGRNQEL 240
            LEK + ARA  EA N F +E   +++QVE L+++NT+LKRAV+IQHERQK  E  N +L
Sbjct: 181 ALEKMLSARAREEAGNKFQEEKVAVQQQVETLVKDNTVLKRAVAIQHERQKALEDANHQL 240

Query: 241 EQLKELVSQYQEQLKTLEVNNYALTVHLKQAQQSSSIPGRFHPDVF 284
             LK+LV QYQE+L+ LEVNNYAL + L+Q +  +S+P RF+PDVF
Sbjct: 241 GLLKQLVPQYQEKLRNLEVNNYALRMQLQQVEHGNSMPARFNPDVF 248

[Close]

BLAST of Sed0025644 vs. TAIR 10
Match: AT1G80040.3 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: Ubiquitin system component Cue protein (TAIR:AT5G32440.1). )

HSP 1 Score: 188.7 bits (478), Expect = 6.3e-48
Identity = 125/287 (43.55%), Postives = 169/287 (58.89%), Query Frame = 0


Query: 1   MSAIVCG-KRSLFEDLPTPPVSKRIRC--SSSSPVRFSPPRSS-NQSGFPFPSTSSSSSQ 60
           MSA+ CG KRS F+D  +PP SKR RC   S+SP+  SPP SS +Q    FP    + + 
Sbjct: 1   MSAVYCGTKRSYFDDNSSPPSSKRFRCFSPSNSPIWSSPPSSSLDQLHSAFPHIELTVAS 60

Query: 61  SAHLVDYLGTIFPDMDKQLLERALEECGDDLDLAIRSLNQLHLGYNDRNLGSTSNTSDVA 120
             H+             Q+L +ALE+ G D + A++SL          +  S+       
Sbjct: 61  KIHV----------SVAQVLVKALEDNGSDFNAAMKSL---------YSFASSEEKKAEE 120

Query: 121 LEANIQPPSQETQGEAAISEEATASENLPTNGAEWVELFVREMTSASNMDDARSRASRVL 180
           L A          G A    +A    N PT+G +WVEL VRE+  +S  DDA+ RA+RVL
Sbjct: 121 LAAG---------GAATQETDAVCGGNPPTSGDDWVELLVREVLQSSGTDDAKVRAARVL 180

Query: 181 EVLEKSICARANAEAANNFHQENKMLREQVEALIQENTILKRAVSIQHERQKEYEGRNQE 240
           E LEK + ARA  EA N F +E   +++QVE L+++NT+LKRAV+IQHERQK  E  N +
Sbjct: 181 EALEKMLSARAREEAGNKFQEEKVAVQQQVETLVKDNTVLKRAVAIQHERQKALEDANHQ 240

Query: 241 LEQLKELVSQYQEQLKTLEVNNYALTVHLKQAQQSSSIPGRFHPDVF 284
           L  LK+LV QYQE+L+ LEVNNYAL + L+Q +  +S+P RF+PDVF
Sbjct: 241 LGLLKQLVPQYQEKLRNLEVNNYALRMQLQQVEHGNSMPARFNPDVF 259

[Close]

BLAST of Sed0025644 vs. TAIR 10
Match: AT5G32440.2 (Ubiquitin system component Cue protein )

HSP 1 Score: 171.0 bits (432), Expect = 1.4e-42
Identity = 109/201 (54.23%), Postives = 131/201 (65.17%), Query Frame = 0


Query: 1   MSAIVCGKRSLFEDL--PTPPVSKRIRC-SSSSPVRFSPPRSSNQSGFPFPSTSSSSSQS 60
           MSAIVCGKRSLFEDL   +PPVSK++RC SSSS  RFSP         P P +SS     
Sbjct: 1   MSAIVCGKRSLFEDLAAASPPVSKKLRCFSSSSSSRFSP---------PIPPSSSL---- 60

Query: 61  AHLVDYLGTIFPDMDKQLLERALEECGDDLDLAIRSLNQLHLGYNDRNLGSTSNTSDVAL 120
             L+D+L  IFPDMDKQ+LERA+EECGDDLD AIR LNQL L   ++N  S +N S V  
Sbjct: 61  --LLDHLAAIFPDMDKQILERAIEECGDDLDSAIRCLNQLRLESANKNSDSATNQSPVV- 120

Query: 121 EANIQPPSQETQGEAAISEEATASENLPTNGAEWVELFVREMTSASNMDDARSRASRVLE 180
              IQ P+ E Q + +  EE      L  +G EWVELFVREM +AS+M DA++RA+R LE
Sbjct: 121 ---IQEPNVEPQQQGSAKEEPNV---LNLDGTEWVELFVREMMNASDMKDAKARAARALE 179

Query: 181 VLEKSICARANAEAANNFHQE 199
            LEKSI AR   +A  N  Q+
Sbjct: 181 ALEKSINARTGTDAMQNLQQK 179

The following BLAST results are available for this feature:

BLAST of Sed0025644 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022937652.1	3.3e-139	95.05	uncharacterized protein LOC111443991 isoform X2 [Cucurbita moschata] >XP_0235376...	[more]
XP_038890913.1	6.1e-138	94.70	uncharacterized protein LOC120080344 [Benincasa hispida]	[more]
XP_022937649.1	8.0e-138	94.72	uncharacterized protein LOC111443991 isoform X1 [Cucurbita moschata] >XP_0229376...	[more]
XP_022965877.1	1.8e-137	94.35	uncharacterized protein LOC111465630 isoform X2 [Cucurbita maxima]	[more]
XP_022965876.1	4.4e-136	94.01	uncharacterized protein LOC111465630 isoform X1 [Cucurbita maxima]	[more]

BLAST of Sed0025644 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0025644 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FBU0	1.6e-139	95.05	uncharacterized protein LOC111443991 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1FBT3	3.9e-138	94.72	uncharacterized protein LOC111443991 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1HLH7	8.6e-138	94.35	uncharacterized protein LOC111465630 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1HMV5	2.1e-136	94.01	uncharacterized protein LOC111465630 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A5D3BFF3	2.8e-136	92.93	CUE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]

BLAST of Sed0025644 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G32440.1	5.8e-78	59.09	Ubiquitin system component Cue protein	[more]
AT5G32440.3	1.7e-77	58.89	Ubiquitin system component Cue protein	[more]
AT1G80040.1	1.5e-49	43.36	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]
AT1G80040.3	6.3e-48	43.55	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]
AT5G32440.2	1.4e-42	54.23	Ubiquitin system component Cue protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 192..219
None	No IPR available	COILS	Coil	Coil	coord: 230..257
None	No IPR available	GENE3D	1.10.8.10		coord: 49..99 e-value: 1.6E-6 score: 29.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 22..55
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 20..55
None	No IPR available	PANTHER	PTHR31245:SF18	SUBFAMILY NOT NAMED	coord: 1..283
None	No IPR available	PANTHER	PTHR31245	UBIQUITIN SYSTEM COMPONENT CUE PROTEIN	coord: 1..283
None	No IPR available	CDD	cd14279	CUE	coord: 60..94 e-value: 6.99442E-8 score: 45.9221
IPR003892	Ubiquitin system component CUE	PFAM	PF02845	CUE	coord: 63..96 e-value: 1.1E-4 score: 21.9
IPR003892	Ubiquitin system component CUE	PROSITE	PS51140	CUE	coord: 56..99 score: 11.740334
IPR009060	UBA-like superfamily	SUPERFAMILY	46934	UBA-like	coord: 54..101

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0025644.1	Sed0025644.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0043130	ubiquitin binding
molecular_function	GO:0005515	protein binding