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Sed0025557 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCAGATTTTCGTGAAAACCCTAACGGGGAAGACCATTACGCTGGAAGTTGAATCCAGCGACACCATTGACAATGTCAAGGCCAAGATCCAGGATAAGGAGGGTAAGTTCTCTCTTTTTCTTTCCTTCACATCTTTCGTTCTCTACCCAACCGGCGGCGCATCGGATAATTTATACGCTGCCGTAAACTCTGCAGGTATTCCCCCCGATCAGCAGCGGCTGATCTTCGCCGGAAAGCAGCTCGAGGACGGCCGCACCCTTGCCGATTACAACATCCAAAAAGGTACAACGTAGTTTAATTTGTTCGTATAATCATACGGATTAGACGAGGAGGTTTTAGTTGAAGTTACTGATGTAGGTAGATGATTCGTCCGACGGCGTTTTGTTTGAGTTTGGTCTGTACATTGAATTGGGTTAAAACTATCATCCATGGTCTTCATTTGAAGAATTAATTTACCACGGCTTTTCTCTACATTCAAGTATTGTAAAGTTCGGCGGTAGCAGTATGTACTATGACATTAGTTGAGGTGCACGCAAGTTGGCCTAGATAGTTACGATATCAAAAAAAAAATTGAATTTGGTGTGGATCGTCTTAGATTTAAATGATCTAGGAAACATTGTAATCTGTAAGTTGGAGCTTGCTTCTCTCAATCTTTATGCTTCTCTCAATCTTTATGTATTGATCTTAAAACCATAAGCAGCGGTTTGAATGAATACGCTGCATTAGTTGTTATTCCTATTAAGAAAAAAATTGATTTTCTGTGAGACTGGGTGATATATTTTTTTGAAACAAGGTAACCACGTCCGTCTCTAGGCTAGGCACCGGAGACATCGAAGGAGTAGTGTAACAAGTGAGTCTCGAACCTGGCACTTTGAGGGAAACATACCCTCAAAACCTAAGTCATCAACCATTGAGCCACCCTTGGAGACTTTGAAATTAATTGGTGTTCGTTTGATTGCACCAGTGTCCAGTAAATTTCATGGAAACACGTGGCTTTTAGCGTTTGGACTGTTGGAAACTGAACGACATTCTTGCTCTTTTACCTTTAAATCATTAAGTCTACTCTGTTCATGAACTAGTTTCGTTTGTTTTTTTTATTGAATGTCTGTTTTTTTAATTGTATGTTCAGAATCAACACTGCATCTGGTTCTGAGGCTTCGTGGTGGGATTATTGAGCCATCTTTGATGGCATTGGCCAGGAAATATAATCAGGACAAGATGATCTGTCGCAAGTAAGTTATTAGTTATTTTTGTTTTTGCCATTTTTCTTATTGTTCTAGAGATAGGACTGGTGTATTGGCTGAACTGAAACAACCAACGATCAAATTGATTAAGTTGATATGCTCCCCTCAAAGTCCTAAGTTCGAAATTCACCTGTGACATTACTTCTTCAATGTCTCTGGTGCCTAGCCTAGAGACAGGCGTGGATACCTTGTTTCAAAAAAAAAAAAAATTGAAGTCGATCCAAAGATTCCTAGCCTGACTCGTTTGTTCAGTTTGTATAATTTTTCTTTCTTTCTTTTTTGAAATCTAACAAGTGGGGTAGGAGGATTGGAAAAAGTAACTTTGGAGCTCTACTATTGGCCTTTTTTGTTTGATTGATTAAGAGTAATTTTTGGTAGTGTTTAGTTTGGGTTGAAACCTAGTAAATTGAACCAAGTCACATGACTTTATCACACATCTAAAAAATAAGTAAACCTAAAAATTGAAAATCAATTTGTATTTCAGTTCAAGATCAGATTCTATTTGTTTGGTTTAGACGCTTGATAAAAAATATAGAGGAGATTGGTTATTTTTGCTCTTTGGACCAATTTTGACCAAGCCATTTCAATGAACATGCCCAATTGGAAGTCTCAAAATTGATAATTTTGTTGATTTTTTTTGTCACAGATGTTATGCACGCCTACATCCCCGAGCTGTCAACTGTAGGAAAAAGAAATGTGGACACAGCAATCAGGTAATGTATATTATCAATACGTTGATGGATTTTCATTCTCTGCTAAAATACATGATGTGCCAACAAATGTTTAATTTTCGTATCGCTGCTGAGCCAACTCGATGA ATGCAGATTTTCGTGAAAACCCTAACGGGGAAGACCATTACGCTGGAAGTTGAATCCAGCGACACCATTGACAATGTCAAGGCCAAGATCCAGGATAAGGAGGGTATTCCCCCCGATCAGCAGCGGCTGATCTTCGCCGGAAAGCAGCTCGAGGACGGCCGCACCCTTGCCGATTACAACATCCAAAAAGAATCAACACTGCATCTGGTTCTGAGGCTTCGTGGTGGGATTATTGAGCCATCTTTGATGGCATTGGCCAGGAAATATAATCAGGACAAGATGATCTGTCGCAAATGTTATGCACGCCTACATCCCCGAGCTGTCAACTGTAGGAAAAAGAAATGTGGACACAGCAATCAGGTAATGTATATTATCAATACGTTGATGGATTTTCATTCTCTGCTAAAATACATGATGTGCCAACAAATGTTTAATTTTCGTATCGCTGCTGAGCCAACTCGATGA ATGCAGATTTTCGTGAAAACCCTAACGGGGAAGACCATTACGCTGGAAGTTGAATCCAGCGACACCATTGACAATGTCAAGGCCAAGATCCAGGATAAGGAGGGTATTCCCCCCGATCAGCAGCGGCTGATCTTCGCCGGAAAGCAGCTCGAGGACGGCCGCACCCTTGCCGATTACAACATCCAAAAAGAATCAACACTGCATCTGGTTCTGAGGCTTCGTGGTGGGATTATTGAGCCATCTTTGATGGCATTGGCCAGGAAATATAATCAGGACAAGATGATCTGTCGCAAATGTTATGCACGCCTACATCCCCGAGCTGTCAACTGTAGGAAAAAGAAATGTGGACACAGCAATCAGGTAATGTATATTATCAATACGTTGATGGATTTTCATTCTCTGCTAAAATACATGATGTGCCAACAAATGTTTAATTTTCGTATCGCTGCTGAGCCAACTCGATGA MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQVMYIINTLMDFHSLLKYMMCQQMFNFRIAAEPTR Homology
BLAST of Sed0025557 vs. NCBI nr
Match: KAF9601361.1 (hypothetical protein IFM89_019093 [Coptis chinensis]) HSP 1 Score: 245.7 bits (626), Expect = 2.5e-61 Identity = 121/125 (96.80%), Postives = 124/125 (99.20%), Query Frame = 0
BLAST of Sed0025557 vs. NCBI nr
Match: ESR43397.1 (hypothetical protein CICLE_v10013083mg [Citrus clementina]) HSP 1 Score: 245.7 bits (626), Expect = 2.5e-61 Identity = 121/123 (98.37%), Postives = 123/123 (100.00%), Query Frame = 0
BLAST of Sed0025557 vs. NCBI nr
Match: PIA34853.1 (hypothetical protein AQUCO_03700255v1 [Aquilegia coerulea]) HSP 1 Score: 245.7 bits (626), Expect = 2.5e-61 Identity = 121/125 (96.80%), Postives = 123/125 (98.40%), Query Frame = 0
BLAST of Sed0025557 vs. NCBI nr
Match: KAF3671910.1 (Ubiquitin-60S ribosomal protein L40-1 [Capsicum annuum]) HSP 1 Score: 245.4 bits (625), Expect = 3.3e-61 Identity = 126/144 (87.50%), Postives = 130/144 (90.28%), Query Frame = 0
BLAST of Sed0025557 vs. NCBI nr
Match: BBG98420.1 (ubiquitin extension protein 1, partial [Prunus dulcis]) HSP 1 Score: 245.4 bits (625), Expect = 3.3e-61 Identity = 125/154 (81.17%), Postives = 135/154 (87.66%), Query Frame = 0
BLAST of Sed0025557 vs. ExPASy Swiss-Prot
Match: P49636 (Ubiquitin-60S ribosomal protein L40 OS=Nicotiana sylvestris OX=4096 GN=UBICEP52-7 PE=2 SV=2) HSP 1 Score: 241.9 bits (616), Expect = 4.8e-63 Identity = 119/121 (98.35%), Postives = 121/121 (100.00%), Query Frame = 0
BLAST of Sed0025557 vs. ExPASy Swiss-Prot
Match: B9DHA6 (Ubiquitin-60S ribosomal protein L40-1 OS=Arabidopsis thaliana OX=3702 GN=RPL40A PE=2 SV=1) HSP 1 Score: 241.1 bits (614), Expect = 8.2e-63 Identity = 119/121 (98.35%), Postives = 120/121 (99.17%), Query Frame = 0
BLAST of Sed0025557 vs. ExPASy Swiss-Prot
Match: P0CH34 (Ubiquitin-60S ribosomal protein L40-1 OS=Oryza sativa subsp. japonica OX=39947 GN=Ub-CEP52-1 PE=2 SV=1) HSP 1 Score: 241.1 bits (614), Expect = 8.2e-63 Identity = 119/121 (98.35%), Postives = 120/121 (99.17%), Query Frame = 0
BLAST of Sed0025557 vs. ExPASy Swiss-Prot
Match: Q42202 (Ubiquitin-60S ribosomal protein L40-2 OS=Arabidopsis thaliana OX=3702 GN=RPL40B PE=2 SV=2) HSP 1 Score: 241.1 bits (614), Expect = 8.2e-63 Identity = 119/121 (98.35%), Postives = 120/121 (99.17%), Query Frame = 0
BLAST of Sed0025557 vs. ExPASy Swiss-Prot
Match: P0CH35 (Ubiquitin-60S ribosomal protein L40-2 OS=Oryza sativa subsp. japonica OX=39947 GN=Ub-CEP52-2 PE=3 SV=1) HSP 1 Score: 241.1 bits (614), Expect = 8.2e-63 Identity = 119/121 (98.35%), Postives = 120/121 (99.17%), Query Frame = 0
BLAST of Sed0025557 vs. ExPASy TrEMBL
Match: A0A2G5CUA0 (Ubiquitin OS=Aquilegia coerulea OX=218851 GN=AQUCO_03700255v1 PE=3 SV=1) HSP 1 Score: 245.7 bits (626), Expect = 1.2e-61 Identity = 121/125 (96.80%), Postives = 123/125 (98.40%), Query Frame = 0
BLAST of Sed0025557 vs. ExPASy TrEMBL
Match: V4SRQ5 (Ubiquitin OS=Citrus clementina OX=85681 GN=CICLE_v10013083mg PE=3 SV=1) HSP 1 Score: 245.7 bits (626), Expect = 1.2e-61 Identity = 121/123 (98.37%), Postives = 123/123 (100.00%), Query Frame = 0
BLAST of Sed0025557 vs. ExPASy TrEMBL
Match: A0A4Y1R2S3 (Ubiquitin (Fragment) OS=Prunus dulcis OX=3755 GN=Prudu_007823 PE=3 SV=1) HSP 1 Score: 245.4 bits (625), Expect = 1.6e-61 Identity = 125/154 (81.17%), Postives = 135/154 (87.66%), Query Frame = 0
BLAST of Sed0025557 vs. ExPASy TrEMBL
Match: A0A5J4ZFZ4 (Ubiquitin OS=Nyssa sinensis OX=561372 GN=F0562_017048 PE=3 SV=1) HSP 1 Score: 244.6 bits (623), Expect = 2.7e-61 Identity = 123/134 (91.79%), Postives = 126/134 (94.03%), Query Frame = 0
BLAST of Sed0025557 vs. ExPASy TrEMBL
Match: I1KAY5 (Ubiquitin OS=Glycine max OX=3847 GN=100792206 PE=3 SV=1) HSP 1 Score: 244.2 bits (622), Expect = 3.6e-61 Identity = 121/121 (100.00%), Postives = 121/121 (100.00%), Query Frame = 0
BLAST of Sed0025557 vs. TAIR 10
Match: AT2G36170.1 (Ubiquitin supergroup;Ribosomal protein L40e ) HSP 1 Score: 241.1 bits (614), Expect = 5.8e-64 Identity = 119/121 (98.35%), Postives = 120/121 (99.17%), Query Frame = 0
BLAST of Sed0025557 vs. TAIR 10
Match: AT3G52590.1 (ubiquitin extension protein 1 ) HSP 1 Score: 241.1 bits (614), Expect = 5.8e-64 Identity = 119/121 (98.35%), Postives = 120/121 (99.17%), Query Frame = 0
BLAST of Sed0025557 vs. TAIR 10
Match: AT1G65350.1 (ubiquitin 13 ) HSP 1 Score: 150.2 bits (378), Expect = 1.3e-36 Identity = 76/77 (98.70%), Postives = 77/77 (100.00%), Query Frame = 0
BLAST of Sed0025557 vs. TAIR 10
Match: AT4G05320.2 (polyubiquitin 10 ) HSP 1 Score: 150.2 bits (378), Expect = 1.3e-36 Identity = 76/77 (98.70%), Postives = 77/77 (100.00%), Query Frame = 0
BLAST of Sed0025557 vs. TAIR 10
Match: AT4G02890.1 (Ubiquitin family protein ) HSP 1 Score: 150.2 bits (378), Expect = 1.3e-36 Identity = 76/77 (98.70%), Postives = 77/77 (100.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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