Sed0025200 (gene) Chayote v1

Overview


Name	Sed0025200
Type	gene
Organism	Sechium edule (Chayote v1)
Description	C2 domain-containing protein
Location	LG10: 36593274 .. 36599884 (+)
RNA-Seq Expression	Sed0025200
Synteny	Sed0025200

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAGAATTCTAAAAAAAAAATCTAGCTTTTGCATAGGACAATCAAAGTTGACCAAAAGTTTATAATTTAACGAAATAAATTGAAGAAGAACTTTTCAAAATGACAGTTTGCAAAGTTGGATGAATCCGTCGAATGGAACAATATAATCACAGGCGGGGACCGATTTGCTTTCTGCAACGCCCAACCATTTTTCAGGTCTCTCTCTCTCTCTCTCTTTCTCTCCCTCGATCCGTTTTTCCCTTCTCGAATCTTCATTATCTGTTGATTTTATCAAAAGGGTTCTTCTGAAATTCGATTTGCTTCGTGGGTTTCAAGAATCTTGTGCATATTCCATTCTGTTTCTGTGAATTTCATTCTGGTTTTCGTTTTGTTTTGTGGGTTCCAAGAAACAGAGCAATTTAGGGCAAAGTCGAGTTTAGAAAACGTTGATTCGTCTATGGCGACTTATAATATTCAGGGTCAATCACTTGAAGTTACGGGTATGTTTGTTTTGCTCTGTTTTGAGATTGGGTTTGTGATGGCTTATTGTAAACGAAAGGAGAAGTTGATTTCGTTTCTGGGTTTTGTTTTGTTTGATTTTTTGTTGTTGTTTGGCTCAGTTATTGGATGCACAAAGTTGAAAGATACGGAATGGATTTCAAGGCAGGATCCCTATGTGTGTCTTGAATATGGTAGCACAAAGTTTCGCACCACCACTTGTACAGGTTTGATTTTGGATTTTCCTTGTTGGTTTTGTTGTTGTTGGATGTGTTTAGTGTTTAGATGGCTTGAACTATGTTGCCCTCAAGTCCCCGAGGGGTGACGGGGCTGTCACCAAAGGCTTGGGGTTTGAAGGTGTGTTCCTCTCAAAGTCTGAGGTTCGAGACTCACTCTTACGTTCATTTGTAGACACCTCCCATGTCTCCATTTCTTCGATGTCTTCCGATGCATGACCTGGGGACATGGTTACTCCAGATATAGTGGAACAATGCTCCAATTTTCCGGTTTGCAAAAAAAAAAACTATGTTTCTCTAAAACCTAGTCGAAATATGTTATTGAGAATTTGAGTTTATATTTTCGTATTGGGCCTTTATGTATTTTGGCTAAGATTGTAGCTGTACGGTATAAACTCTCTTAAAATACTAGTTCCGTTTGACCAAGCATTTCTGTTTTTATCTTCTAAATAAAACTGTTTTCTCCTCTGTACTCTGGACACAGCAAACTCGGCATTAGTGAAGCAATTAAATTGCTGATTAGTGAACCACGTAAATTGCTATGTTATTAGTCTCGCGTTTTTCTTTAATTCTCGATTATTGTTTTGTTTATTCATAACATTTAGATCTGAGGAGATGATCTTGAACTGAATGCGGATTTGATTGGCATTGTGTAGATGGTGGCAAAAATCCCATATTCCAACAGAAATTTGTGTTCTCTTTAATTGAAGGGTTAAGAGAGATTAATGTTACAGTTTGGAACAGCAATACTGTTACTTATGATGACTTCATTGGCAATGGAAAGTAAGATTTATGTTCTCTCTTCCTTTTGTTTTTTCATGTGTGGCTGTTCTGGTCAAATCTTAACTTGTATTGAAATTTTTCATCTGGGGTATTCAGCTTTGAATTTTGTGTTTTACAGAATTCAATTGGCAAAAGTTTTAGCAGAAGGTTATGATGATAGCTCATGGTCACTTCAAACAAAAACTGGCAGGTATGATATAGCTGAGAGTTAGTTTGATCAAATTTCCCTCCTTAAAACCATGTTAGAATCTTTGACTTGCAAGAAATTTGCTATTTTCTTAGGTTCAATATTTTGTTTATTGCATGTTATATTTATAGAACTGGTTTTGTTGCTTTATGTTTTATTTTCTTTAAGCTTGTTTTCACCATTGAAGTTTATCTTCATATGAAGAGCTATAAGCTTAAAAATAGTGATTCGAAGTGTATGATGACATGAACTTTAGAAGTCAATAGATTGCAGTTTTGAAGGAAAAAAAAAAGTTTAAAAGCATAAAATATTTTTTCGAGACAATTTCTTATGGGGCCCCTTGATTTTTTCCTGTAAATATTTTTGAGGCAATCAAGTCTATCATTGGTCAGTCCCCAAGGGGTGACACAGTGGTTGAAGACCTGGGCTTTGAGGGTATTCCCCTCAAGGTCCCGAGTTCGAGTCTTCCCTGTGACATTACTCCTTCGATGTCTCCGGTGTCTGGCCTAGGGACGGGCGTAGTTCCTTAATTAAAAAAAAAGTCTATCATTGGTCATGAACATAGCTTAATTATTTATGTCGTGGTGTTGATCGCGGTTATTGTAGTTCTCCAACTTAATTCTAGATGTTGTAGTTCTCCAACTTAATTCTAGATGTTGTAGTTCTCCACCTTACAAAGAATGAAACACCATAGACCCATCAAAAAGTGCATCTTCCTTGCAACCCTGTCCAAAGTGTTCACCATTCCATGTAAAACTTGCCAAATAAAAAATATGTCCTTTGGTTTTTTTCACCCTTCAGATCAAGGCAAACTCTAAACTCTACTAACATGTTAGGAGAGGGACTCACCAAACACATGAAATATGAGTTATAGGAAAAGCCATAAGAGGGGCTAGGGCATTAAGAAGGAATGTCACTTCTCTCCAACTCACTCTGGACATTTCACACCGGGCCAAAAGGTTTATGATCTCCAACGTATTCTTATCGAATAAGTCCCTAAAGGGTGGCGCAGTGGTTGAAGACTTGGGTTTCGAGGGTATGCTCCACTCAAAATCCTGGGTTCGAGACTCACTATAACACTCCGGTTTAAATGATAACTACAAACAGAAATGAATTACATCCAGCTCTCTTCCAAACGTTATCGACCACTAAACATTTTACAGATTTAACCCAAGAGAAACCTAAAACTCATTCTAATTATAGAGGCACAACCTATCAAGTGCAGCACACTGTGAAAAAAAATTACCATATTAATGCAGCGGAAACCACCCTTACTCACACGCGAGTAGGAGCTATTTTAGCTTTTCTCATCCTCTCTACCACAACCCACATACTTAAAATATAAACAAGTCTACAGAACCTATACCGTGGGCTCTGATACCAACTGTAACACCCCGGTTTAAATGATGACTACAAACAGAAATGAATTACATCCAGCTCTCTTCCAAACGTTATCGACCACTAAACATTTTACAGATTTAACCCAAGAGAAACCTAAAACTCTTTCTAAGAAAGTAAAAGAAAATCTATAGGTTGATGTTCCCAAATATCACAAGTTCAACTCTAGAAATAACTCGCATAAACAATGTCCCCATAATAAATTCCACAGCCCACTTGAAATGCCTACTCACCTTATGGAAACTCCTTAAAGATACCTGCTTCAACATAACAAAAGAGAACACAAGCAAACATATACAGAGGGTTACATCATCGCTATTCCAGCAAAACAATCTCAAGTACTAAATAATAACTCAACAAGAATAAATATGCAAATGGTTTCATGCCCACTCTAAGCTTAACCATCCCACCCTCCACTCAATTACTCACATCCTTATGGTATATGGCTACATAGAAGGGTTCGTGCACATGAGGTACAAGACGAGGCCCTACACACCTCGGTGCTACTCTCCAAAAGCTGCCACACATCATTGACAACCAACAGGCAACAACCAAAACATTAGCAAGAAATTGGTGCATAAATAATCATGAAACAATTCGTCGCACCAAATGGAACAACCCACAAGCCACGCATCGCCCTCGGATTTCATTTAAAAAATTCTGTCCATACCTTGAACTTACACATCACCTTCTGTTCTACCCATCAAGCTTTCTCTCTCTCTCCCTCTCTCTCTGCCTTTGCAATGCTACTTGGTTTAACTCTCTCTCTCCCTCATTCTTCATCACCCAATTTTCAGAACACCCTATAACCTTAAACATTCTTTAGGAAAAGCATTAAGATACCTGTCATAATCTAGTCATTCTCCAGCAAGTAGAGAACTTAATTCCACTAAAAATCATAACACCAACATTAGTAATCCACCTTTAGAACACAATCTCCCCATCTGCTACAATACTAGGAAACTCCACCCAAGTCAATTCATCCATGAATACTCGCAAACTTGTCTAGCATAAGAGTTTAGAGCAACCCTCACCTGTTGTTGAGCCAATCCCCCGACGTGTAGACTGGATCTTCTTACTCTCACCCTTCCTACACATACAACACGAATATAATAAAATTCCACACTAAAAGGTTTAATCAACTCATATTTACTAAAAACATCACTAAGAGCAACTGGAAGAAGTTGTATTAAGCCTAACAAGAGAAACAAACTCCAAATTTACCTCCCTTAGGTTCGGTATAAATACCCGACCTCACTACCCCATACTCGTCAACAGGTTGCCTCACCTTTTCCTTCTCCGATTCCATCCTTGTTTCCCCTTAACTGTACTCAAGACTTCGACTTCAACAACTGCCATGGAGGTTTAAGATCTCGAATTAGTTTTCCCCCCATCACTTCTCTTATACCAAAACAAATACAAAGCTACACATACCTCAATCAAGTTCTTCGCACTCGTTCTCATCAATTGCACAGGATCTCCCTCTCGATTTTTGTCGAAAAACAGCCAAAAAATACTGTCCTTCTTTAGCCCTAATATTTTTCAAGTAACCTCTCCCTTGTTCATCAATTCTTTCTTTCTTCTCCCCTCCATCTTACACGTGGTCCCCCTCCCTTTTGGGCCTGATTAGCAACCTCAGGATTTTTTAAAGAGGAACCTAAACTCCACCTTGCAACATCACACACTGCCAAGGCCCATTTAAAATAAATATGGGTTTCAGACTCACCTGTGACATTACTCCTTCGATGTCTTCGGTGCCAGGTCTAGGGACGAACGTGGTTACCTTTGTTTCAAAAACATATTTTTATCAGATAAAACATGACTGAAGTTCAAGTAGCGAGAATGACTGGGGTTCGATAACAACACTCTAGCCATTGACTTACACTTCATCAGAGACAAATGATACAAATTAGGAAACTCTAAGTGAAGGGGTCTATCCCCAACCTCATTTGTCCTTCCTAAAAAATGTACTAGTCCCATTTCCCACTCGAGAAATCAAAAGGCAAAAATAGAAAGAAAACTTAGAGGCGATGCTTACTCAAAAGGAAATATGCATACTTGACTCGCACACAAGCTTCCGTCAAAAGGAAATATGCCATACTTACTCACAATAACCTTCTGTCAAAGAGCTTCACGCTTCTAGTTGAACTGCTACACAACCATTTTGCTAGTTGGGCTTGGTTGCAGTCTCAATTTACCACTTATAATGACTGGATTGAAGTTAATCTTCCTCCTTTCCAGAAAAGCAATCTCTTCTATCTTCCTTACCTTACTCACCACGGGCTCCTAGCTAAGGTCGAATTTGAACAAGTGACTTAAAGGAAGTCCTAAATATGAGGACAAAAACATTCCCACCTTGCAGCTAACCAAGCATGCCCAGTTTTTTTAAAAGCCCACTAAGGCGAAAAAAAAGCCCAAGGCGCACTCGTTGCGTCTTGCCTCGTAGAAGTCCAACGCATTTTAAAGCATTTGTCTTTAACTCGTCTACAAAAAACCACATCGAAACAAGTTTTTTGCTAGAATTCTCAATTTCTAACTCCTCGAACTAACTCTCCATCCAAACACCTCCTTAGGTAGTTCGATGTCTTCTTTTTGTTATTATTATGACATGATATTTGGACAAGCATCACAATTAACTTGACCAAAATTTATATTTCTAACCTTCACTTTCTCCTCATTACTTTCACCTCATTGCAGACATGCTGGGGAAGTACGACTGATTTTACATTTTTCAAATACCAATGTAAGTGAAATTTGTTTTATAGCTTTAGTTACTGGTCAAAAACAACAATTCATTGCTGTTTGCATAAGATTCATGTGCAAAGAGATGACCTTATTTGTTTCTGCTGCAGAGACCACAAACAAGTTTTCCACCACCCTCGGCGCCGCCCCAAGTCTCCATGTATGCTCCGATGCCATCGCCAGCCTACCCTCCCGCTCCTACACCCTATGCATTTACATCTCCCTATCCTTCTTACCCACCCAACTCTGGAGCATATCAAACATCATCCATGTATTCCTCCCCGTATCCAGCCGGGTATCCTCCGGCATCGTACCCACCACCTCCCTCGGCTTACCCTCCCTCTCCATACCCACCGCCTCCACAAGCATCGCCATTCTATCCCCCAGGTAGATCGACGTCTAATTCGATATTTTAATCGTTCCGTTAAATTCAATTGCAATGTAACTAAATCTTGGTTCTCTGTGTGTGTTGTTGCCTCAGGTCCTTATCCTGGAGTTTATCCCCCACCACAGTATTGAAATCGTAAGGTTGGCTCTAAGTTATCTTTTCATTAAGTTGTATAAAGCTTCACTTTCTTTTAGTATGCATGTAGACTTCTTCTGCTAATGTGTTTTAGATTTTTTTGGCATTTGTCTTTTGGTGTAAAGACCGAGTGATTTGACAGTAATATATTGAGGTTGGTTTTTGGTTTTCCTTCTATTCAAATTTAAGCTTATTATAGAAACAAAGACAGCTATGATAAATTGGTTTGAAAATTTTAAATGTCTTTCAGACTTGAAAGACTCTAG

mRNA sequence

GAGAATTCTAAAAAAAAAATCTAGCTTTTGCATAGGACAATCAAAGTTGACCAAAAGTTTATAATTTAACGAAATAAATTGAAGAAGAACTTTTCAAAATGACAGTTTGCAAAGTTGGATGAATCCGTCGAATGGAACAATATAATCACAGGCGGGGACCGATTTGCTTTCTGCAACGCCCAACCATTTTTCAGAGCAATTTAGGGCAAAGTCGAGTTTAGAAAACGTTGATTCGTCTATGGCGACTTATAATATTCAGGGTCAATCACTTGAAGTTACGGTTATTGGATGCACAAAGTTGAAAGATACGGAATGGATTTCAAGGCAGGATCCCTATGTGTGTCTTGAATATGGTAGCACAAAGTTTCGCACCACCACTTGTACAGATGGTGGCAAAAATCCCATATTCCAACAGAAATTTGTGTTCTCTTTAATTGAAGGGTTAAGAGAGATTAATGTTACAGTTTGGAACAGCAATACTGTTACTTATGATGACTTCATTGGCAATGGAAAAATTCAATTGGCAAAAGTTTTAGCAGAAGGTTATGATGATAGCTCATGGTCACTTCAAACAAAAACTGGCAGACATGCTGGGGAAGTACGACTGATTTTACATTTTTCAAATACCAATAGACCACAAACAAGTTTTCCACCACCCTCGGCGCCGCCCCAAGTCTCCATGTATGCTCCGATGCCATCGCCAGCCTACCCTCCCGCTCCTACACCCTATGCATTTACATCTCCCTATCCTTCTTACCCACCCAACTCTGGAGCATATCAAACATCATCCATGTATTCCTCCCCGTATCCAGCCGGGTATCCTCCGGCATCGTACCCACCACCTCCCTCGGCTTACCCTCCCTCTCCATACCCACCGCCTCCACAAGCATCGCCATTCTATCCCCCAGGTCCTTATCCTGGAGTTTATCCCCCACCACAGTATTGAAATCGTAAGGTTGGCTCTAAGTTATCTTTTCATTAAGTTGTATAAAGCTTCACTTTCTTTTAGTATGCATGTAGACTTCTTCTGCTAATGTGTTTTAGATTTTTTTGGCATTTGTCTTTTGGTGTAAAGACCGAGTGATTTGACAGTAATATATTGAGGTTGGTTTTTGGTTTTCCTTCTATTCAAATTTAAGCTTATTATAGAAACAAAGACAGCTATGATAAATTGGTTTGAAAATTTTAAATGTCTTTCAGACTTGAAAGACTCTAG

Coding sequence (CDS)

ATGGCGACTTATAATATTCAGGGTCAATCACTTGAAGTTACGGTTATTGGATGCACAAAGTTGAAAGATACGGAATGGATTTCAAGGCAGGATCCCTATGTGTGTCTTGAATATGGTAGCACAAAGTTTCGCACCACCACTTGTACAGATGGTGGCAAAAATCCCATATTCCAACAGAAATTTGTGTTCTCTTTAATTGAAGGGTTAAGAGAGATTAATGTTACAGTTTGGAACAGCAATACTGTTACTTATGATGACTTCATTGGCAATGGAAAAATTCAATTGGCAAAAGTTTTAGCAGAAGGTTATGATGATAGCTCATGGTCACTTCAAACAAAAACTGGCAGACATGCTGGGGAAGTACGACTGATTTTACATTTTTCAAATACCAATAGACCACAAACAAGTTTTCCACCACCCTCGGCGCCGCCCCAAGTCTCCATGTATGCTCCGATGCCATCGCCAGCCTACCCTCCCGCTCCTACACCCTATGCATTTACATCTCCCTATCCTTCTTACCCACCCAACTCTGGAGCATATCAAACATCATCCATGTATTCCTCCCCGTATCCAGCCGGGTATCCTCCGGCATCGTACCCACCACCTCCCTCGGCTTACCCTCCCTCTCCATACCCACCGCCTCCACAAGCATCGCCATTCTATCCCCCAGGTCCTTATCCTGGAGTTTATCCCCCACCACAGTATTGA

Protein sequence

MATYNIQGQSLEVTVIGCTKLKDTEWISRQDPYVCLEYGSTKFRTTTCTDGGKNPIFQQKFVFSLIEGLREINVTVWNSNTVTYDDFIGNGKIQLAKVLAEGYDDSSWSLQTKTGRHAGEVRLILHFSNTNRPQTSFPPPSAPPQVSMYAPMPSPAYPPAPTPYAFTSPYPSYPPNSGAYQTSSMYSSPYPAGYPPASYPPPPSAYPPSPYPPPPQASPFYPPGPYPGVYPPPQY

Homology

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BLAST of Sed0025200 vs. NCBI nr
Match: XP_038888782.1 (protein SRC2 homolog [Benincasa hispida] >XP_038888783.1 protein SRC2 homolog [Benincasa hispida] >XP_038888784.1 protein SRC2 homolog [Benincasa hispida])

HSP 1 Score: 392.5 bits (1007), Expect = 2.6e-105
Identity = 207/246 (84.15%), Postives = 218/246 (88.62%), Query Frame = 0


Query: 1   MATYNIQGQSLEVTVIGCTKLKDTEWISRQDPYVCLEYGSTKFRTTTCTDGGKNPIFQQK 60
           M+TY IQGQ LEVTVIGCTKLKDTEWISRQDPYVCLEYGSTKFRTTTCTDGG+NP FQ+K
Sbjct: 1   MSTYTIQGQPLEVTVIGCTKLKDTEWISRQDPYVCLEYGSTKFRTTTCTDGGRNPTFQEK 60

Query: 61  FVFSLIEGLREINVTVWNSNTVTYDDFIGNGKIQLAKVLAEGYDDSSWSLQTKTGRHAGE 120
           FVFSLIEGLREINVTVWNSNTVTYDDFIGNGKIQLAKVLAEGYDDSSWSLQTKTGRHAGE
Sbjct: 61  FVFSLIEGLREINVTVWNSNTVTYDDFIGNGKIQLAKVLAEGYDDSSWSLQTKTGRHAGE 120

Query: 121 VRLILHFSNTNRPQTSFPPPS------APPQVSMYAPMPSP---AY-PPAPTPYA-FTSP 180
           VRLILHF+N NRP ++F P +       PPQVS YA MP P   AY PP+ TPYA F SP
Sbjct: 121 VRLILHFANANRPSSTFAPSAPPFHAPTPPQVSAYATMPLPHPTAYPPPSATPYASFQSP 180

Query: 181 YPSYPPNSGAYQTSSMYSSPYPAGYPPASYPPPPSAYPPSPYPPPPQASPFYPPGPYPGV 236
           YPSYPP+SGAYQT SMYSSPYP+GYPP SYPPPPSAYPP PYPPPPQ SPFYPPGPYPG+
Sbjct: 181 YPSYPPSSGAYQT-SMYSSPYPSGYPPTSYPPPPSAYPPGPYPPPPQVSPFYPPGPYPGI 240

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BLAST of Sed0025200 vs. NCBI nr
Match: XP_008454977.1 (PREDICTED: leucine-rich repeat extensin-like protein 3 [Cucumis melo] >XP_008454978.1 PREDICTED: leucine-rich repeat extensin-like protein 3 [Cucumis melo] >XP_016901753.1 PREDICTED: leucine-rich repeat extensin-like protein 3 [Cucumis melo] >KAA0031324.1 leucine-rich repeat extensin-like protein 3 [Cucumis melo var. makuwa] >TYK06775.1 leucine-rich repeat extensin-like protein 3 [Cucumis melo var. makuwa])

HSP 1 Score: 387.1 bits (993), Expect = 1.1e-103
Identity = 207/248 (83.47%), Postives = 216/248 (87.10%), Query Frame = 0


Query: 1   MATYNIQGQSLEVTVIGCTKLKDTEWISRQDPYVCLEYGSTKFRTTTCTDGGKNPIFQQK 60
           M+TY+IQGQ LEVTVIGCTKLKDTEWISRQDPYVCLEYGSTKFRTTTCTDGG+NP FQ+K
Sbjct: 1   MSTYSIQGQPLEVTVIGCTKLKDTEWISRQDPYVCLEYGSTKFRTTTCTDGGRNPTFQEK 60

Query: 61  FVFSLIEGLREINVTVWNSNTVTYDDFIGNGKIQLAKVLAEGYDDSSWSLQTKTGRHAGE 120
           FVFSLIEGLREI VTVWNSNTVTYDDFIGNGKIQLAKVLAEGYDDSSWSLQTKTGRHAGE
Sbjct: 61  FVFSLIEGLREIIVTVWNSNTVTYDDFIGNGKIQLAKVLAEGYDDSSWSLQTKTGRHAGE 120

Query: 121 VRLILHFSNTNRPQTSFPPPS------APPQVSMYAPMPSP-----AYPPA-PTPYA-FT 180
           VRLILHF+N NRP +SF P +       PPQV  YA MP P     AYPP   TPYA F 
Sbjct: 121 VRLILHFANANRPTSSFAPSAPPFHAPTPPQVPAYATMPPPPAHPTAYPPPNATPYASFQ 180

Query: 181 SPYPSYPPNSGAYQTSSMYSSPYPAGYPPASYPPPPSAYPPSPYPPPPQASPFYPPGPYP 236
           SPYPSYPP+SG YQT SMYSSPYP GYPP SYPPPPSAYPP+PYPPPPQASPFYPPGPYP
Sbjct: 181 SPYPSYPPSSGTYQT-SMYSSPYPPGYPPTSYPPPPSAYPPNPYPPPPQASPFYPPGPYP 240

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BLAST of Sed0025200 vs. NCBI nr
Match: XP_011658892.1 (leucine-rich repeat extensin-like protein 3 [Cucumis sativus] >XP_031744405.1 leucine-rich repeat extensin-like protein 3 [Cucumis sativus] >KGN43902.1 hypothetical protein Csa_017078 [Cucumis sativus])

HSP 1 Score: 386.0 bits (990), Expect = 2.4e-103
Identity = 206/249 (82.73%), Postives = 217/249 (87.15%), Query Frame = 0


Query: 1   MATYNIQGQSLEVTVIGCTKLKDTEWISRQDPYVCLEYGSTKFRTTTCTDGGKNPIFQQK 60
           M+T+ IQGQ LEVTVIGCTKLKDTEWISRQDPYV LEYGSTKFRTTTCTDGG+NP FQ+K
Sbjct: 1   MSTFAIQGQPLEVTVIGCTKLKDTEWISRQDPYVFLEYGSTKFRTTTCTDGGRNPTFQEK 60

Query: 61  FVFSLIEGLREINVTVWNSNTVTYDDFIGNGKIQLAKVLAEGYDDSSWSLQTKTGRHAGE 120
           FVFSLIEGLREINVTVWNSNTVTYDDFIGNGKIQLAKVLAEGYDDSSWSLQTKTGRHAGE
Sbjct: 61  FVFSLIEGLREINVTVWNSNTVTYDDFIGNGKIQLAKVLAEGYDDSSWSLQTKTGRHAGE 120

Query: 121 VRLILHFSNTNRPQTSFPPPS------APPQVSMY--APMPSPAY-----PPAPTPYA-F 180
           VRLILHF+N NRP +SF P +       PPQV  Y   P PSPA+     PP PTPYA F
Sbjct: 121 VRLILHFANANRPTSSFAPSAPPFHVPTPPQVPAYITMPPPSPAHPTAYPPPTPTPYASF 180

Query: 181 TSPYPSYPPNSGAYQTSSMYSSPYPAGYPPASYPPPPSAYPPSPYPPPPQASPFYPPGPY 236
            SPYPSYPP+SG YQT SMYSSPYP+GYPP SYPPPPSAYPP+PYPPPPQASPFYPPGPY
Sbjct: 181 QSPYPSYPPSSGTYQT-SMYSSPYPSGYPPTSYPPPPSAYPPNPYPPPPQASPFYPPGPY 240

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BLAST of Sed0025200 vs. NCBI nr
Match: XP_023553843.1 (C2 domain-containing protein At1g63220-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 372.1 bits (954), Expect = 3.6e-99
Identity = 199/247 (80.57%), Postives = 213/247 (86.23%), Query Frame = 0


Query: 1   MATYNIQGQSLEVTVIGCTKLKDTEWISRQDPYVCLEYGSTKFRTTTCTDGGKNPIFQQK 60
           M+TY+IQGQ LE TV+GCTKLKDTEWISRQDPYVCLEYGSTKFRTTTCTDGG+NP FQQK
Sbjct: 1   MSTYSIQGQPLEATVVGCTKLKDTEWISRQDPYVCLEYGSTKFRTTTCTDGGRNPTFQQK 60

Query: 61  FVFSLIEGLREINVTVWNSNTVTYDDFIGNGKIQLAKVLAEGYDDSSWSLQTKTGRHAGE 120
           FVFSLIEGLREINVTVWNSNTVTYDDFIG GKIQLAKVL+EGYDDSSWSLQTKTGRHAGE
Sbjct: 61  FVFSLIEGLREINVTVWNSNTVTYDDFIGTGKIQLAKVLSEGYDDSSWSLQTKTGRHAGE 120

Query: 121 VRLILHFSNTNRPQTSFPPPS------APPQVSMYAPMPSPAYP-----PAPTPYA-FTS 180
           VRLILHF+N  RP +SF P +      APPQV +YA MP P +P     P PTPYA + S
Sbjct: 121 VRLILHFANAKRPSSSFAPSAPPFQAPAPPQVPVYATMP-PTHPTAYAHPTPTPYASYQS 180

Query: 181 PYPSYPPNSGAYQTSSMYSSPYPAGYPPASYPPPPSAYPPSPYPPPPQASPFYPPGPYPG 236
           PYPSYPP+S AYQT SMYSSPYP+GYPPASYPPPPSAYPP+PYPP PQASP YPP PY G
Sbjct: 181 PYPSYPPSSVAYQT-SMYSSPYPSGYPPASYPPPPSAYPPNPYPPHPQASPVYPPSPYHG 240

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BLAST of Sed0025200 vs. NCBI nr
Match: XP_022988903.1 (elicitor-responsive protein 3-like isoform X2 [Cucurbita maxima] >XP_022988904.1 elicitor-responsive protein 3-like isoform X2 [Cucurbita maxima] >XP_022988905.1 elicitor-responsive protein 3-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 371.7 bits (953), Expect = 4.7e-99
Identity = 197/244 (80.74%), Postives = 216/244 (88.52%), Query Frame = 0


Query: 1   MATYNIQGQSLEVTVIGCTKLKDTEWISRQDPYVCLEYGSTKFRTTTCTDGGKNPIFQQK 60
           M+ Y+IQGQ+LEV VIGCTKLKDTEWISRQD YVCLEYGST FRTTTCTDGG+NPIFQ+K
Sbjct: 1   MSIYSIQGQALEVIVIGCTKLKDTEWISRQDSYVCLEYGSTNFRTTTCTDGGRNPIFQEK 60

Query: 61  FVFSLIEGLREINVTVWNSNTVTYDDFIGNGKIQLAKVLAEGYDDSSWSLQTKTGRHAGE 120
           FVFSLIEG+REINVTVWNSNTVTYDDFIGNGKIQLAKVLAEGYDDS+WSLQTKTGRHAGE
Sbjct: 61  FVFSLIEGIREINVTVWNSNTVTYDDFIGNGKIQLAKVLAEGYDDSTWSLQTKTGRHAGE 120

Query: 121 VRLILHFSNTNRPQTSF----PPPSAPP--QVSMYAPMPS---PAYPPAPTPYAFTSPYP 180
           VRLILHF+  +R   +F    PP  APP  Q++MYA MPS    AYP  PTPYAF+SP+P
Sbjct: 121 VRLILHFATADRLPANFAPSAPPFHAPPPSQLAMYATMPSAHPTAYPHPPTPYAFSSPFP 180

Query: 181 SYPPNSGAYQTSSMYSSPYPAGYPPASYPPPPSAYPPSPYPPPPQASPFYPPGPYPGVYP 236
           SYPPN+GAYQT SMYSSP+P+GYPP+SYPPP SAYPP+PYP  PQASPFYPPGPYPGVYP
Sbjct: 181 SYPPNNGAYQT-SMYSSPFPSGYPPSSYPPPSSAYPPAPYPLHPQASPFYPPGPYPGVYP 240

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BLAST of Sed0025200 vs. ExPASy TrEMBL
Match: A0A1S4E0J9 (leucine-rich repeat extensin-like protein 3 OS=Cucumis melo OX=3656 GN=LOC103495260 PE=4 SV=1)

HSP 1 Score: 387.1 bits (993), Expect = 5.2e-104
Identity = 207/248 (83.47%), Postives = 216/248 (87.10%), Query Frame = 0


Query: 1   MATYNIQGQSLEVTVIGCTKLKDTEWISRQDPYVCLEYGSTKFRTTTCTDGGKNPIFQQK 60
           M+TY+IQGQ LEVTVIGCTKLKDTEWISRQDPYVCLEYGSTKFRTTTCTDGG+NP FQ+K
Sbjct: 1   MSTYSIQGQPLEVTVIGCTKLKDTEWISRQDPYVCLEYGSTKFRTTTCTDGGRNPTFQEK 60

Query: 61  FVFSLIEGLREINVTVWNSNTVTYDDFIGNGKIQLAKVLAEGYDDSSWSLQTKTGRHAGE 120
           FVFSLIEGLREI VTVWNSNTVTYDDFIGNGKIQLAKVLAEGYDDSSWSLQTKTGRHAGE
Sbjct: 61  FVFSLIEGLREIIVTVWNSNTVTYDDFIGNGKIQLAKVLAEGYDDSSWSLQTKTGRHAGE 120

Query: 121 VRLILHFSNTNRPQTSFPPPS------APPQVSMYAPMPSP-----AYPPA-PTPYA-FT 180
           VRLILHF+N NRP +SF P +       PPQV  YA MP P     AYPP   TPYA F 
Sbjct: 121 VRLILHFANANRPTSSFAPSAPPFHAPTPPQVPAYATMPPPPAHPTAYPPPNATPYASFQ 180

Query: 181 SPYPSYPPNSGAYQTSSMYSSPYPAGYPPASYPPPPSAYPPSPYPPPPQASPFYPPGPYP 236
           SPYPSYPP+SG YQT SMYSSPYP GYPP SYPPPPSAYPP+PYPPPPQASPFYPPGPYP
Sbjct: 181 SPYPSYPPSSGTYQT-SMYSSPYPPGYPPTSYPPPPSAYPPNPYPPPPQASPFYPPGPYP 240

[Close]

BLAST of Sed0025200 vs. ExPASy TrEMBL
Match: A0A5D3C5U4 (Leucine-rich repeat extensin-like protein 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G00770 PE=4 SV=1)

HSP 1 Score: 387.1 bits (993), Expect = 5.2e-104
Identity = 207/248 (83.47%), Postives = 216/248 (87.10%), Query Frame = 0


Query: 1   MATYNIQGQSLEVTVIGCTKLKDTEWISRQDPYVCLEYGSTKFRTTTCTDGGKNPIFQQK 60
           M+TY+IQGQ LEVTVIGCTKLKDTEWISRQDPYVCLEYGSTKFRTTTCTDGG+NP FQ+K
Sbjct: 1   MSTYSIQGQPLEVTVIGCTKLKDTEWISRQDPYVCLEYGSTKFRTTTCTDGGRNPTFQEK 60

Query: 61  FVFSLIEGLREINVTVWNSNTVTYDDFIGNGKIQLAKVLAEGYDDSSWSLQTKTGRHAGE 120
           FVFSLIEGLREI VTVWNSNTVTYDDFIGNGKIQLAKVLAEGYDDSSWSLQTKTGRHAGE
Sbjct: 61  FVFSLIEGLREIIVTVWNSNTVTYDDFIGNGKIQLAKVLAEGYDDSSWSLQTKTGRHAGE 120

Query: 121 VRLILHFSNTNRPQTSFPPPS------APPQVSMYAPMPSP-----AYPPA-PTPYA-FT 180
           VRLILHF+N NRP +SF P +       PPQV  YA MP P     AYPP   TPYA F 
Sbjct: 121 VRLILHFANANRPTSSFAPSAPPFHAPTPPQVPAYATMPPPPAHPTAYPPPNATPYASFQ 180

Query: 181 SPYPSYPPNSGAYQTSSMYSSPYPAGYPPASYPPPPSAYPPSPYPPPPQASPFYPPGPYP 236
           SPYPSYPP+SG YQT SMYSSPYP GYPP SYPPPPSAYPP+PYPPPPQASPFYPPGPYP
Sbjct: 181 SPYPSYPPSSGTYQT-SMYSSPYPPGYPPTSYPPPPSAYPPNPYPPPPQASPFYPPGPYP 240

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BLAST of Sed0025200 vs. ExPASy TrEMBL
Match: A0A0A0K6H5 (C2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G073380 PE=4 SV=1)

HSP 1 Score: 386.0 bits (990), Expect = 1.2e-103
Identity = 206/249 (82.73%), Postives = 217/249 (87.15%), Query Frame = 0


Query: 1   MATYNIQGQSLEVTVIGCTKLKDTEWISRQDPYVCLEYGSTKFRTTTCTDGGKNPIFQQK 60
           M+T+ IQGQ LEVTVIGCTKLKDTEWISRQDPYV LEYGSTKFRTTTCTDGG+NP FQ+K
Sbjct: 1   MSTFAIQGQPLEVTVIGCTKLKDTEWISRQDPYVFLEYGSTKFRTTTCTDGGRNPTFQEK 60

Query: 61  FVFSLIEGLREINVTVWNSNTVTYDDFIGNGKIQLAKVLAEGYDDSSWSLQTKTGRHAGE 120
           FVFSLIEGLREINVTVWNSNTVTYDDFIGNGKIQLAKVLAEGYDDSSWSLQTKTGRHAGE
Sbjct: 61  FVFSLIEGLREINVTVWNSNTVTYDDFIGNGKIQLAKVLAEGYDDSSWSLQTKTGRHAGE 120

Query: 121 VRLILHFSNTNRPQTSFPPPS------APPQVSMY--APMPSPAY-----PPAPTPYA-F 180
           VRLILHF+N NRP +SF P +       PPQV  Y   P PSPA+     PP PTPYA F
Sbjct: 121 VRLILHFANANRPTSSFAPSAPPFHVPTPPQVPAYITMPPPSPAHPTAYPPPTPTPYASF 180

Query: 181 TSPYPSYPPNSGAYQTSSMYSSPYPAGYPPASYPPPPSAYPPSPYPPPPQASPFYPPGPY 236
            SPYPSYPP+SG YQT SMYSSPYP+GYPP SYPPPPSAYPP+PYPPPPQASPFYPPGPY
Sbjct: 181 QSPYPSYPPSSGTYQT-SMYSSPYPSGYPPTSYPPPPSAYPPNPYPPPPQASPFYPPGPY 240

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BLAST of Sed0025200 vs. ExPASy TrEMBL
Match: A0A6J1JNP1 (elicitor-responsive protein 3-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111486118 PE=4 SV=1)

HSP 1 Score: 371.7 bits (953), Expect = 2.3e-99
Identity = 197/244 (80.74%), Postives = 216/244 (88.52%), Query Frame = 0


Query: 1   MATYNIQGQSLEVTVIGCTKLKDTEWISRQDPYVCLEYGSTKFRTTTCTDGGKNPIFQQK 60
           M+ Y+IQGQ+LEV VIGCTKLKDTEWISRQD YVCLEYGST FRTTTCTDGG+NPIFQ+K
Sbjct: 1   MSIYSIQGQALEVIVIGCTKLKDTEWISRQDSYVCLEYGSTNFRTTTCTDGGRNPIFQEK 60

Query: 61  FVFSLIEGLREINVTVWNSNTVTYDDFIGNGKIQLAKVLAEGYDDSSWSLQTKTGRHAGE 120
           FVFSLIEG+REINVTVWNSNTVTYDDFIGNGKIQLAKVLAEGYDDS+WSLQTKTGRHAGE
Sbjct: 61  FVFSLIEGIREINVTVWNSNTVTYDDFIGNGKIQLAKVLAEGYDDSTWSLQTKTGRHAGE 120

Query: 121 VRLILHFSNTNRPQTSF----PPPSAPP--QVSMYAPMPS---PAYPPAPTPYAFTSPYP 180
           VRLILHF+  +R   +F    PP  APP  Q++MYA MPS    AYP  PTPYAF+SP+P
Sbjct: 121 VRLILHFATADRLPANFAPSAPPFHAPPPSQLAMYATMPSAHPTAYPHPPTPYAFSSPFP 180

Query: 181 SYPPNSGAYQTSSMYSSPYPAGYPPASYPPPPSAYPPSPYPPPPQASPFYPPGPYPGVYP 236
           SYPPN+GAYQT SMYSSP+P+GYPP+SYPPP SAYPP+PYP  PQASPFYPPGPYPGVYP
Sbjct: 181 SYPPNNGAYQT-SMYSSPFPSGYPPSSYPPPSSAYPPAPYPLHPQASPFYPPGPYPGVYP 240

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BLAST of Sed0025200 vs. ExPASy TrEMBL
Match: A0A6J1GLU4 (C2 domain-containing protein At1g63220-like OS=Cucurbita moschata OX=3662 GN=LOC111455479 PE=4 SV=1)

HSP 1 Score: 365.9 bits (938), Expect = 1.2e-97
Identity = 197/247 (79.76%), Postives = 211/247 (85.43%), Query Frame = 0


Query: 1   MATYNIQGQSLEVTVIGCTKLKDTEWISRQDPYVCLEYGSTKFRTTTCTDGGKNPIFQQK 60
           M+TY+IQGQ LE TV+GCTKLKDTEWISRQDPYVCLEYGSTKFRTTTCTDGG+NP FQQK
Sbjct: 1   MSTYSIQGQPLEATVVGCTKLKDTEWISRQDPYVCLEYGSTKFRTTTCTDGGRNPTFQQK 60

Query: 61  FVFSLIEGLREINVTVWNSNTVTYDDFIGNGKIQLAKVLAEGYDDSSWSLQTKTGRHAGE 120
           FVFSLIEGLREINVTVWNSNTVTYDDFIG GKIQLAKVL+EGYDDSSWSLQTKTGRHAGE
Sbjct: 61  FVFSLIEGLREINVTVWNSNTVTYDDFIGTGKIQLAKVLSEGYDDSSWSLQTKTGRHAGE 120

Query: 121 VRLILHFSNTNRPQTSFPPPS------APPQVSMYAPMPSPAYP-----PAPTPYA-FTS 180
           VRLILHF+N  RP +SF P +      APPQV +YA MP P +P     P PTPYA + S
Sbjct: 121 VRLILHFANAKRPSSSFAPSAPPFQAPAPPQVPVYATMP-PTHPTAYAHPTPTPYASYQS 180

Query: 181 PYPSYPPNSGAYQTSSMYSSPYPAGYPPASYPPPPSAYPPSPYPPPPQASPFYPPGPYPG 236
           PYPSYPP+S AYQT SMYSSPYP+GYPPASYPPPPSAYP +PYPP PQAS  YPP PY G
Sbjct: 181 PYPSYPPSSVAYQT-SMYSSPYPSGYPPASYPPPPSAYPSNPYPPHPQASSVYPPSPYHG 240

[Close]

BLAST of Sed0025200 vs. TAIR 10
Match: AT4G34150.1 (Calcium-dependent lipid-binding (CaLB domain) family protein )

HSP 1 Score: 235.0 bits (598), Expect = 6.3e-62
Identity = 142/246 (57.72%), Postives = 168/246 (68.29%), Query Frame = 0


Query: 6   IQGQSLEVTVIGCTKLKDTEWISRQDPYVCLEYGSTKFRTTTCTDGGKNPIFQQKFVFSL 65
           IQGQ LEVTV+GC KLKDTEW SRQDPYV LEYG    RT TCTDGGKN +FQ+KF+F+L
Sbjct: 7   IQGQILEVTVVGCQKLKDTEWFSRQDPYVVLEYGGRSHRTRTCTDGGKNAVFQEKFIFTL 66

Query: 66  IEGLREINVTVWNSNTVTYDDFIGNGKIQLAKVLAEGYDDSSWSLQTKTGRHAGEVRLIL 125
           IEGLR++ V VWNSNT++ DDFIGN  IQL KVL++ YDD +W+LQ+KTGR AGEV+L+L
Sbjct: 67  IEGLRDLKVAVWNSNTLSTDDFIGNATIQLQKVLSQEYDDCTWTLQSKTGRFAGEVQLLL 126

Query: 126 HFSNTNRPQTSFPPPSAP--PQVSMYAPMPSPA-YPPAPTPYAFTSPYP---------SY 185
           H++   +       PSAP  P V  Y+  PS + Y  AP PY+  S YP          Y
Sbjct: 127 HYAGAKKHNYG-SAPSAPYAPHVPQYSAPPSASPYSTAP-PYSGPSLYPQVQQYPQPSGY 186

Query: 186 PPNSGAYQTSSMYSSPYPAGYP--PASYPPPP--SAYPPSPYPPPPQASPFYPPGPYPGV 236
           PP SG     S Y  P  +GYP  P++YPPPP  SAYPP PYPP P    +YP GPYPG 
Sbjct: 187 PPASGYPPQPSAYPPPSTSGYPPIPSAYPPPPPSSAYPPQPYPPQPS---YYPQGPYPGQ 246

The following BLAST results are available for this feature:

BLAST of Sed0025200 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038888782.1	2.6e-105	84.15	protein SRC2 homolog [Benincasa hispida] >XP_038888783.1 protein SRC2 homolog [B...	[more]
XP_008454977.1	1.1e-103	83.47	PREDICTED: leucine-rich repeat extensin-like protein 3 [Cucumis melo] >XP_008454...	[more]
XP_011658892.1	2.4e-103	82.73	leucine-rich repeat extensin-like protein 3 [Cucumis sativus] >XP_031744405.1 le...	[more]
XP_023553843.1	3.6e-99	80.57	C2 domain-containing protein At1g63220-like [Cucurbita pepo subsp. pepo]	[more]
XP_022988903.1	4.7e-99	80.74	elicitor-responsive protein 3-like isoform X2 [Cucurbita maxima] >XP_022988904.1...	[more]

BLAST of Sed0025200 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0025200 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4E0J9	5.2e-104	83.47	leucine-rich repeat extensin-like protein 3 OS=Cucumis melo OX=3656 GN=LOC103495...	[more]
A0A5D3C5U4	5.2e-104	83.47	Leucine-rich repeat extensin-like protein 3 OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A0A0K6H5	1.2e-103	82.73	C2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G073380 PE=4 SV=...	[more]
A0A6J1JNP1	2.3e-99	80.74	elicitor-responsive protein 3-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC...	[more]
A0A6J1GLU4	1.2e-97	79.76	C2 domain-containing protein At1g63220-like OS=Cucurbita moschata OX=3662 GN=LOC...	[more]

BLAST of Sed0025200 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G34150.1	6.3e-62	57.72	Calcium-dependent lipid-binding (CaLB domain) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR01217	PRICHEXTENSN	coord: 189..201 score: 44.62 coord: 132..144 score: 38.46 coord: 203..224 score: 42.73 coord: 147..163 score: 36.47
None	No IPR available	PANTHER	PTHR47052	CONSERVED SERINE PROLINE-RICH PROTEIN (AFU_ORTHOLOGUE AFUA_2G01790)	coord: 3..235
None	No IPR available	CDD	cd00030	C2	coord: 11..108 e-value: 5.74647E-20 score: 79.8035
IPR000008	C2 domain	SMART	SM00239	C2_3c	coord: 10..107 e-value: 1.1E-14 score: 64.8
IPR000008	C2 domain	PFAM	PF00168	C2	coord: 10..106 e-value: 9.8E-16 score: 57.9
IPR000008	C2 domain	PROSITE	PS50004	C2	coord: 1..109 score: 15.023594
IPR035892	C2 domain superfamily	GENE3D	2.60.40.150	C2 domain	coord: 9..129 e-value: 6.7E-24 score: 86.6
IPR035892	C2 domain superfamily	SUPERFAMILY	49562	C2 domain (Calcium/lipid-binding domain, CaLB)	coord: 4..130

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0025200.1	Sed0025200.1	mRNA
Sed0025200.2	Sed0025200.2	mRNA
Sed0025200.3	Sed0025200.3	mRNA